Pregenerated sensors for CDYL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059288Ensembl transcript IDs: ENSMUST00000075220.14, ENSMUST00000163595.3, ENSMUST00000225602.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACACTGGACCACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTaGCTGGGTAAGAATGGGACAGTAAGAAAGGTAGAGCGGCGGGCA | + |
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Preference number: 1 (lower is better) Translates to: DTGPPAFLQTLGSSR*LGKNGTVRKVERRA Trigger: TGCCCGCCGCTCTACCTTTCTTACTGTCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTGGTCCAGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR GCA 90 bp | TACACCCAGTGTGGCAGCAGTGTAGGATCTGCCCCTCGGATCCTCTaGCTGGGCTACTTCTGTTTTGACTGTATCTTCTACGGCTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: YTQCGSSVGSAPRIL*LGYFCFDCIFYGCD Trigger: ATCACAGCCGTAGAAGATACAGTCAAAACAGAAGTAGCCCAGGCAGAGGATCCGAGGGGCAGATCCTACACTGCTGCCACACTGGGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225602.2 |
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| 3UTR-3UTR TCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCAACTCGAGCTACGGAGTaGCTCACAGACACTGGACCA | + |
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Preference number: 2 (lower is better) Translates to: GKDRCTHCTALHMAGEASTRATE*LTDTGP Trigger: TGGTCCAGTGTCTGTGAGTCACTCCGTAGCTCGAGT...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR-3UTR GCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCAAGACACTGGACCACCTaGTTTCCTCCAGACACTGGG | + |
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Preference number: 2 (lower is better) Translates to: GKDRCTHCTALHMAGEASRHWTT*FPPDTG Trigger: CCCAGTGTCTGGAGGAAAGCAGGTGGTCCAGTGTCT...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR-3UTR CCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCACTGGGCTCTTCACGGTaGCTGGGTAAGAATGGGACA | + |
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Preference number: 2 (lower is better) Translates to: GKDRCTHCTALHMAGEASLGSSR*LGKNGT Trigger: TGTCCCATTCTTACCCAGCCACCGTGAAGAGCCCAG...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR-3UTR GCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGAGGATGTTTCCAGTTCTaGCTCCAAGCACGAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: HLLSSRHWALHGGWVRMGGCFQF*LQARAT Trigger: AGTGGCTCGTGCTTGGAGGCAGAACTGGAAACATCC...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTGGATGTTTCCAGTTCTaGCTCCAAGCACGAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: FQQKPTPPWVGFSISDAFGCFQF*LQARAT Trigger: AGTGGCTCGTGCTTGGAGGCAGAACTGGAAACATCC...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR-3UTR TCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGAGGGATTTTCCATCAGTaGTGCTTTTTCTACCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: HLLSSRHWALHGGWVRMGGIFHQ*CFFYQV Trigger: AACCTGGTAGAAAAAGCATCACTGATGGAAAATCCC...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTGCCTGGGCTACTTCTGTTTTGACTGTATCTTCTACGGCTGTGATGGTTGACTTCACTGTCACTTaGGAGACACCTATAAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SSAWATSVLTVSSTAVMVDFTVT*ETPISV Trigger: CACACTTATAGGTGTCTCTCAAGTGACAGTGAAGTC...AACCATCACAGCCGTAGAAGATACAGTCAAAACAGAAGTAGCCCAGGCAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225602.2 |
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| 3UTR GCA 72 bp | TCGAGCTACGGAGTGACTCACAGACACTGGACCACCTaGTTTCCTCCAGACACTGGGCTCTTCACGGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSYGVTHRHWTT*FPPDTGLFTVA Trigger: AGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTGGTCCAGTGTCTGTGAGTCACTCCGTAGCTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR-3UTR CAA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCAGAACTGTTTTCAGCATaGAGGTACTCACACCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GKDRCTHCTALHMAGEASELFSA*RYSHLP Trigger: GGGGAGGTGTGAGTACCTCAATGCTGAAAACAGTTC...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR GCA 72 bp | TCCCCACACCATGGGGTACTCGTGAACACGAAACCGTaGGCAATATATGGCAGACATAAGAGCAGAGACTGG | + |
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Preference number: 3 (lower is better) Translates to: SPHHGVLVNTKP*AIYGRHKSRDW Trigger: CCAGTCTCTGCTCTTATGTCTGCCATATATTGCGCACGGTTTCGTGTTCACGAGTACCCCATGGTGTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR GCA 72 bp | TGTGGCAGCAGTGTAGGATCTGCCCCTCGGATCCTCTaGCTGGGCTACTTCTGTTTTGACTGTATCTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: CGSSVGSAPRIL*LGYFCFDCIFY Trigger: GTAGAAGATACAGTCAAAACAGAAGTAGCCCAGGCAGAGGATCCGAGGGGCAGATCCTACACTGCTGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225602.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTGAACTGTTTTCAGCATaGAGGTACTCACACCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: FQQKPTPPWVGFSISDAFELFSA*RYSHLP Trigger: GGGGAGGTGTGAGTACCTCAATGCTGAAAACAGTTC...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR-3UTR CAA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGAGCTTTTTCTACCAGGTaGGTCTTAAGTTTGATCAGA | + |
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Preference number: 3 (lower is better) Translates to: HLLSSRHWALHGGWVRMGAFSTR*VLSLIR Trigger: TCTGATCAAACTTAAGACCAACCTGGTAGAAAAAGC...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| 3UTR CCA 72 bp | TTTCTACATGTTTCAGTAGAGGGAGGGGGAGAAGGCTaGCTAGTATTCTTGAGGGTCTGTGATCTAGATTTA | + |
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Preference number: 3 (lower is better) Translates to: FLHVSVEGGGEG*LVFLRVCDLDL Trigger: TAAATCTAGATCACAGACCCTCAAGAATACTAGCCAGCCTTCTCCCCCTCCCTCTACTGAAACATGTAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCATGCTGGGGGAGGCTCTaGTGGCACGAGCCAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASCWGRL*WHEPGY Trigger: GTAGCCTGGCTCGTGCCAGCAGAGCCTCCCCCAGCA...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR TCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCAGTGTCCTCGGCACCCTaGTCCACAGGGTCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASVSSAP*STGSSF Trigger: GAAGCTGGACCCTGTGGATCAGGGTGCCGAGGACAC...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR TCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGACGCTGCCCACGGCGCTaGGCAGAACCAGCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGRCPRR*AEPACC Trigger: ACAGCAAGCTGGTTCTGCTCAGCGCCGTGGGCAGCG...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGATGCTGGGGGAGGCTCTaGTGGCACGAGCCAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGCWGRL*WHEPGY Trigger: GTAGCCTGGCTCGTGCCAGCAGAGCCTCCCCCAGCA...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGAGGGAGACCAGACCCTTaGCACAGGCCTCCTGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGGRPDP*HRPPVP Trigger: CGGCACAGGAGGCCTGTGGCAAGGGTCTGGTCTCCC...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGACCCAGTGGGCTTCTCTaGAGTCACCTCTGGGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGPSGLL*SHLWGY Trigger: GTAGCCCCAGAGGTGACTGCAGAGAAGCCCACTGGG...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGAGATGTATTCGGGGCCTaGTCCCCATCCTGGCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGDVFGA*SPSWLA Trigger: AGCGAGCCAGGATGGGGAGCAGGCCCCGAATACATC...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTGCTTCCGGGCGTTGCTaGGGGAGGCTCTGCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFASGRC*GRLCWH Trigger: GTGCCAGCAGAGCCTCCCCCAGCAACGCCCGGAAGC...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCACCTGGCCAAAACACCTaGGAGACCAGACCCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASPGQNT*ETRPLP Trigger: TGGCAAGGGTCTGGTCTCCCAGGTGTTTTGGCCAGG...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGAATGGAGTCCATGCCCTaGGCGGAGCCCCAGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGMESMP*AEPQIF Trigger: GAAGATCTGGGGCTCCGCCCAGGGCATGGACTCCAT...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | CCAGTGTGGCAGCAGTGTAGGATCTGCCCCTCGGATCCTCTGCCTGGGCTACTTCTTTCTCTGGAAGTGTaGAGAGCTGGGCTTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PVWQQCRICPSDPLPGLLLSLEV*RAGLPV Trigger: CACAGGAAGCCCAGCTCTGCACACTTCCAGAGAAAG...AAGTAGCCCAGGCAGAGGATCCGAGGGGCAGATCCTACACTGCTGCCACACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225602.2 |
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| CDS-3UTR CCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCAGGTAGAGCAGCCATCTaGACTCTGTCCGAAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASGRAAI*TLSEGG Trigger: ACCACCTTCGGACAGAGTCCAGATGGCTGCTCTACC...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR TCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCAACGGGGCCAGAAACCTaGGGCACTAGTGGATGTATT | + |
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Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASTGPET*GTSGCI Trigger: AATACATCCACTAGTGCCTCAGGTTTCTGGCCCCGT...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTGCCACAGGCCTCCTGTaGCGTCAACTTCCGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFATGLL*RQLPPT Trigger: AGTGGGCGGAAGTTGACGGCACAGGAGGCCTGTGGC...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCAGCTCCATCTTCATATTaGAGCGCACCAGGGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASAPSSY*SAPGLW Trigger: CCAAAGCCCTGGTGCGCTGCAATATGAAGATGGAGC...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCAGGAAGTGTGCAGAGCTaGGCTTCCTGTGAATTAGGC | + |
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Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASGSVQS*ASCELG Trigger: GCCTAATTCACAGGAAGCCCAGCTCTGCACACTTCC...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075220.14 |
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| CDS-3UTR CCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTTGGGGGAGGCTCTGCTaGCACGAGCCAGGCTACCTT | + |
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Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFWGRLC*HEPGYL Trigger: AAGGTAGCCTGGCTCGTGCCAGCAGAGCCTCCCCCA...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR TCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGACGTTGTGGCGCCGGTTaGAGTCATGGATGTATTCCT | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGRCGAG*SHGCIP Trigger: AGGAATACATCCATGACTTCAACCGGCGCCACAACG...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR TCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGAACGGGGCCAGAAACCTaGGGCACTAGTGGATGTATT | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGTGPET*GTSGCI Trigger: AATACATCCACTAGTGCCTCAGGTTTCTGGCCCCGT...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGACGAGGTCCATGTTCTTaGGGTTTGCAAGAGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGRGPCS*GLQEMG Trigger: CCCCATCTCTTGCAAACCGCAAGAACATGGACCTCG...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTGATGTATTCGGGGCCTaGTCCCCATCCTGGCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFDVFGA*SPSWLA Trigger: AGCGAGCCAGGATGGGGAGCAGGCCCCGAATACATC...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CCA 90 bp | TGGCAGCAGTGTAGGATCTGCCCCTCGGATCCTCTGCCTGGGCTACTTCTGTTTGGAAGTGTGCAGAGCTaGGCTTCCTGTGAATTAGGC | + |
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Preference number: 4 (lower is better) Translates to: WQQCRICPSDPLPGLLLFGSVQS*ASCELG Trigger: GCCTAATTCACAGGAAGCCCAGCTCTGCACACTTCC...AAACAGAAGTAGCCCAGGCAGAGGATCCGAGGGGCAGATCCTACACTGCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225602.2 |
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| CDS-3UTR CCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGAAGAGAGTGCTGTGGGTaGACCTGGAAATCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGRECCG*TWKSAS Trigger: GGAAGCAGATTTCCAGGTCCACCCACAGCACTCTCT...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGACTGTGTGAAGGTTCCTaGCCAAAACACCTGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGLCEGS*PKHLGD Trigger: GTCTCCCAGGTGTTTTGGCCAGGAACCTTCACACAG...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR GCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTTTAACATGGAGTCCATaGCCTGGGCGGAGCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFLTWSP*PGRSPR Trigger: TCTGGGGCTCCGCCCAGGGCATGGACTCCATGTTAA...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCACTACCACAAGTGCTTTaGAGTTGGTCTTGGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASLPQVL*SWSWRE Trigger: CTCTCTCCAAGACCAACTCCAAAGCACTTGTGGTAG...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCAGACTCTGTCCGAAGGTaGTATAGGGTGTTTGAAACC | + |
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Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASDSVRR*YRVFET Trigger: GGTTTCAAACACCCTATACCACCTTCGGACAGAGTC...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTCCTGGCCAAAACACCTaGGAGACCAGACCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFPGQNT*ETRPLP Trigger: TGGCAAGGGTCTGGTCTCCCAGGTGTTTTGGCCAGG...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR TCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCACTGCTTTTGGACTCATaGTCTTTGCCTACCACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASLLLDS*SLPTTS Trigger: ACTTGTGGTAGGCAAAGATCATGAGTCCAAAAGCAG...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR GCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCATTTGCCTACCACAAGTaGTTTGGAGTTGGTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASFAYHK*FGVGLG Trigger: TCCAAGACCAACTCCAAAGCACTTGTGGTAGGCAAA...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR GCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCATGGACTCATGATCTTTaGCTACCACAAGTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASWTHDL*LPQVLW Trigger: CCAAAGCACTTGTGGTAGGCAAAGATCATGAGTCCA...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR TCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTCGGATGTCTGTATGGTaGCTGTTCCGTTGGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFRMSVW*LFRWLL Trigger: TAGCAGCCAACGGAACAGTCACCATACAGACATCCG...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR TCA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGAAGCCATCTTGCTTCCTaGCGACAATATCTCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: HLLSSRHWALHGGWVRMGSHLAS*RQYLCI Trigger: GATACAGAGATATTGTCGTCAGGAAGCAAGATGGCT...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCAGTGTAGGATCTGCCCCTCGGATCCTCTGCCTGGGCTACTTCTGTTTTTTCAGAGGTTTAACTaGAGACAGAAGACCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: WQQCRICPSDPLPGLLLFFQRFN*RQKTHP Trigger: AGGGTGGGTCTTCTGTCTTCAGTTAAACCTCTGAAA...AAACAGAAGTAGCCCAGGCAGAGGATCCGAGGGGCAGATCCTACACTGCTGCCA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225602.2 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTCGAGGTCCATGTTCTTaGGGTTTGCAAGAGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFRGPCS*GLQEMG Trigger: CCCCATCTCTTGCAAACCGCAAGAACATGGACCTCG...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTGCTCCATCTTCATATTaGAGCGCACCAGGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFAPSSY*SAPGLW Trigger: CCAAAGCCCTGGTGCGCTGCAATATGAAGATGGAGC...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCGCTTCCGGGCGTTGCTaGGGGAGGCTCTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLASGRC*GRLCWH Trigger: GTGCCAGCAGAGCCTCCCCCAGCAACGCCCGGAAGC...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTAGAGAGTGCTGTGGGTaGACCTGGAAATCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFRECCG*TWKSAS Trigger: GGAAGCAGATTTCCAGGTCCACCCACAGCACTCTCT...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTTTGGAGAGAGTGCTGTaGGTGGACCTGGAAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFLERVL*VDLEIC Trigger: GCAGATTTCCAGGTCCACCCACAGCACTCTCTCCAA...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTCTTTGGAGTTGGTCTTaGAGAGAGTGCTGTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFLWSWS*RECCGW Trigger: CCACCCACAGCACTCTCTCCAAGACCAACTCCAAAG...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CCA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCACGCTTGTCAAAAGGTTaGTCTCTTCTGTCGTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: GKDRCTHCTALHMAGEASRLSKG*SLLSSI Trigger: TATTGACGACAGAAGAGACCAACCTTTTGACAAGCG...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTCTGTGTGAAGGTTCCTaGCCAAAACACCTGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFLCEGS*PKHLGD Trigger: GTCTCCCAGGTGTTTTGGCCAGGAACCTTCACACAG...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR TCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTGACAACTGGGTTACATaGAGCCAGCTCCTTGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFDNWVT*SQLLDS Trigger: CGAATCAAGGAGCTGGCTTCATGTAACCCAGTTGTC...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR GCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCTCTGCTTCCGGGCGTTaGTGGGGGAGGCTCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLSASGR*WGRLCW Trigger: CCAGCAGAGCCTCCCCCAGCAACGCCCGGAAGCAGA...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| 3UTR CAA 72 bp | CTGCCCCTCGGATCCTCTGCCTGGGCTACTTCTGTTTaGACTGTATCTTCTACGGCTGTGATGGTTAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLGSSAWATSV*TVSSTAVMVKL Trigger: AAGCTTAACCATCACAGCCGTAGAAGATACAGTCAAAACAGAAGTAGCCCAGGCAGAGGATCCGAGGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225602.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGCTACTTCTGTTTTGACTGTATCTTCTACGGCTGTGATGGTTAAGCTTCGCTTGATCGGGTTCTaGGACTGTTGCAGGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AWATSVLTVSSTAVMVKLRLIGF*DCCRNH Trigger: GTGGTTCCTGCAACAGTCTCAGAACCCGATCAAGCG...AAGCTTAACCATCACAGCCGTAGAAGATACAGTCAAAACAGAAGTAGCCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225602.2 |
||
| CDS-3UTR TCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCGTGTCCTCGGCACCCTaGTCCACAGGGTCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLVSSAP*STGSSF Trigger: GAAGCTGGACCCTGTGGATCAGGGTGCCGAGGACAC...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR GCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCGCCACAGGCCTCCTGTaGCGTCAACTTCCGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLATGLL*RQLPPT Trigger: AGTGGGCGGAAGTTGACGGCACAGGAGGCCTGTGGC...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTTGGACTCATGATCTTTaGCTACCACAAGTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFWTHDL*LPQVLW Trigger: CCAAAGCACTTGTGGTAGGCAAAGATCATGAGTCCA...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR GCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCCCCAGTGGGCTTCTCTaGAGTCACCTCTGGGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLPSGLL*SHLWGY Trigger: GTAGCCCCAGAGGTGACTGCAGAGAAGCCCACTGGG...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR GCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCTTAACATGGAGTCCATaGCCTGGGCGGAGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLLTWSP*PGRSPR Trigger: TCTGGGGCTCCGCCCAGGGCATGGACTCCATGTTAA...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGCTACTTCTGTTTTGACTGTATCTTCTACGGCTGTGATGGTTAAGCTTTTGTTCAGCTTTCTCTaGAAGTGTGCAGAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AWATSVLTVSSTAVMVKLLFSFL*KCAELG Trigger: GCCCAGCTCTGCACACTTCCAGAGAAAGCTGAACAA...AAGCTTAACCATCACAGCCGTAGAAGATACAGTCAAAACAGAAGTAGCCCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225602.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTCGCTTGTCAAAAGGTTaGTCTCTTCTGTCGTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: FQQKPTPPWVGFSISDAFRLSKG*SLLSSI Trigger: TATTGACGACAGAAGAGACCAACCTTTTGACAAGCG...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR TCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCCGCTTGATCGGGTTCTaGGACTGTTGCAGGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLRLIGF*DCCRNH Trigger: GTGGTTCCTGCAACAGTCTCAGAACCCGATCAAGCG...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075220.14 |
||
| CDS-3UTR CCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCGGTAGAGCAGCCATCTaGACTCTGTCCGAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLGRAAI*TLSEGG Trigger: ACCACCTTCGGACAGAGTCCAGATGGCTGCTCTACC...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR TCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCCGTTGTGGCGCCGGTTaGAGTCATGGATGTATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLRCGAG*SHGCIP Trigger: AGGAATACATCCATGACTTCAACCGGCGCCACAACG...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR TCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCCGGATGTCTGTATGGTaGCTGTTCCGTTGGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLRMSVW*LFRWLL Trigger: TAGCAGCCAACGGAACAGTCACCATACAGACATCCG...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR GCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCCTTTCTCTGGAAGTGTaGAGAGCTGGGCTTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLLSLEV*RAGLPV Trigger: CACAGGAAGCCCAGCTCTGCACACTTCCAGAGAAAG...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075220.14 |
||
| CDS-3UTR CCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCCTTTGGAGTTGGTCTTaGAGAGAGTGCTGTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLLWSWS*RECCGW Trigger: CCACCCACAGCACTCTCTCCAAGACCAACTCCAAAG...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCTTGTTCAGCTTTCTCTaGAAGTGTGCAGAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLLFSFL*KCAELG Trigger: GCCCAGCTCTGCACACTTCCAGAGAAAGCTGAACAA...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075220.14 |
||
| CDS-3UTR TCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCCTGCTAGCGCATCCATaGATGGAGATGTACCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLLLAHP*MEMYLF Trigger: GAAAAGGTACATCTCCATTCATGGATGCGCTAGCAG...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCCAAGTGCTTTGGAGTTaGTCTTGGAGAGAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLQVLWS*SWRECC Trigger: ACAGCACTCTCTCCAAGACCAACTCCAAAGCACTTG...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CCA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCGACTCTGTCCGAAGGTaGTATAGGGTGTTTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: STRLVLSLIRTVFSIEVLDSVRR*YRVFET Trigger: GGTTTCAAACACCCTATACCACCTTCGGACAGAGTC...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS GCA 90 bp | GGCTCGCTCCGCACCAGGGCCCAGCAAAGCCCCAGTGGGCTTCTCTaGAGTCACCTCTGGGGCTACAGTGTCCTCGGCACCCTGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSLRTRAQQSPSGLL*SHLWGYSVLGTLIH Trigger: GTGGATCAGGGTGCCGAGGACACTGTAGCCCCAGAGGTGACTGCAGAGAAGCCCACTGGGGCTTTGCTGGGCCCTGGTGCGGAGCGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS GCA 90 bp | GGGTGGACCTGGAAATCTGCTTCCGGGCGTTGCTGGGGGAGGCTCTaGTGGCACGAGCCAGGCTACCTTCCTTTTGCCTCTCGTTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GWTWKSASGRCWGRL*WHEPGYLPFASRCG Trigger: GCCACAACGAGAGGCAAAAGGAAGGTAGCCTGGCTCGTGCCAGCAGAGCCTCCCCCAGCAACGCCCGGAAGCAGATTTCCAGGTCCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS CCA 90 bp | TGGACCTGGAAATCTGCTTCCGGGCGTTGCTGGGGGAGGCTCTGCTaGCACGAGCCAGGCTACCTTCCTTTTGCCTCTCGTTGTGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: WTWKSASGRCWGRLC*HEPGYLPFASRCGA Trigger: GGCGCCACAACGAGAGGCAAAAGGAAGGTAGCCTGGCTCGTGCCAGCAGAGCCTCCCCCAGCAACGCCCGGAAGCAGATTTCCAGGTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CAA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGATGGGAGACCAGACCCTaGCCACAGGCCTCCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLLSSRHWALHGGWVRMGWETRP*PQASCA Trigger: GGCACAGGAGGCCTGTGGCAAGGGTCTGGTCTCCCA...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CAA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTATCTGCTTCCGGGCGTaGCTGGGGGAGGCTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FQQKPTPPWVGFSISDAFICFRA*LGEALL Trigger: CAGCAGAGCCTCCCCCAGCAACGCCCGGAAGCAGAT...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CAA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCACCTACCACAAGTGCTTaGGAGTTGGTCTTGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GKDRCTHCTALHMAGEASPTTSA*ELVLER Trigger: TCTCTCCAAGACCAACTCCAAAGCACTTGTGGTAGG...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CAA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCATCACATTCTCTCTCATaGGCCTGCTCTAGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GKDRCTHCTALHMAGEASSHSLS*ACSSSI Trigger: GATGGAGCTAGAGCAGGCCAATGAGAGAGAATGTGA...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
||
| CDS-3UTR CAA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCAATTTTGATCCCTGACTaGGCGAGGTCCATGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKDRCTHCTALHMAGEASILIPD*ARSMFL Trigger: CAAGAACATGGACCTCGCCAAGTCAGGGATCAAAAT...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGATTAGGCACGAGAATTTaGATCCCTGACTTGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLLSSRHWALHGGWVRMGLGTRI*IPDLAR Trigger: CCTCGCCAAGTCAGGGATCAAAATTCTCGTGCCTAA...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS CCA 90 bp | TGGACTCATGATCTTTGCCTACCACAAGTGCTTTGGAGTTGGTCTTaGAGAGAGTGCTGTGGGTGGACCTGGAAATCTGCTTCCGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: WTHDLCLPQVLWSWS*RECCGWTWKSASGR Trigger: ACGCCCGGAAGCAGATTTCCAGGTCCACCCACAGCACTCTCTCCAAGACCAACTCCAAAGCACTTGTGGTAGGCAAAGATCATGAGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTGCTTTGGAGTTGGTCTaGGAGAGAGTGCTGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FQQKPTPPWVGFSISDAFALELV*ERVLWV Trigger: CACCCACAGCACTCTCTCCAAGACCAACTCCAAAGC...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS CCA 90 bp | GCTGGCTGCTTTTGGACTCATGATCTTTGCCTACCACAAGTGCTTTaGAGTTGGTCTTGGAGAGAGTGCTGTGGGTGGACCTGGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: AGCFWTHDLCLPQVL*SWSWRECCGWTWKS Trigger: AGATTTCCAGGTCCACCCACAGCACTCTCTCCAAGACCAACTCCAAAGCACTTGTGGTAGGCAAAGATCATGAGTCCAAAAGCAGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TGGCAGCAGTGTAGGATCTGCCCCTCGGATCCTCTGCCTGGGCTACTTCTGTTTGTTATCATCAGTAGGTaGTTCAGCTTTCTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WQQCRICPSDPLPGLLLFVIISR*FSFLWK Trigger: CTTCCAGAGAAAGCTGAACAACCTACTGATGATAAC...AAACAGAAGTAGCCCAGGCAGAGGATCCGAGGGGCAGATCCTACACTGCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225602.2 |
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| CDS-3UTR CAA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTCCTACCACAAGTGCTTaGGAGTTGGTCTTGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FQQKPTPPWVGFSISDAFPTTSA*ELVLER Trigger: TCTCTCCAAGACCAACTCCAAAGCACTTGTGGTAGG...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTTTAGGCACGAGAATTTaGATCCCTGACTTGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FQQKPTPPWVGFSISDAFLGTRI*IPDLAR Trigger: CCTCGCCAAGTCAGGGATCAAAATTCTCGTGCCTAA...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTTCACATTCTCTCTCATaGGCCTGCTCTAGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FQQKPTPPWVGFSISDAFSHSLS*ACSSSI Trigger: GATGGAGCTAGAGCAGGCCAATGAGAGAGAATGTGA...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | GGTAAAGACAGATGTACACACTGCACAGCGCTCCACATGGCCGGGGAGGCGTCATTCTTGTTTTTCCTTTaGTCAACGATACTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GKDRCTHCTALHMAGEASFLFFL*STILST Trigger: GGTGGAAAGTATCGTTGACAAAAGGAAAAACAAGAA...TGACGCCTCCCCGGCCATGTGGAGCGCTGTGCAGTGTGTACATCTGTCTTTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTATTTTGATCCCTGACTaGGCGAGGTCCATGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FQQKPTPPWVGFSISDAFILIPD*ARSMFL Trigger: CAAGAACATGGACCTCGCCAAGTCAGGGATCAAAAT...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTCCGCTTGTCAAAAGGTaGGTCTCTTCTGTCGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FQQKPTPPWVGFSISDAFPLVKR*VSSVVN Trigger: ATTGACGACAGAAGAGACCAACCTTTTGACAAGCGG...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTCTGAAACGCAACCGCTaGTCAAAAGGTTGGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FQQKPTPPWVGFSISDAFLKRNR*SKGWSL Trigger: AAGAGACCAACCTTTTGACAAGCGGTTGCGTTTCAG...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGATATTCTCTGACGATTTaGTGGATAACAAGATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HLLSSRHWALHGGWVRMGYSLTI*WITRCG Trigger: CCCACATCTTGTTATCCACAAAATCGTCAGAGAATA...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | CACCTGCTTTCCTCCAGACACTGGGCTCTTCACGGTGGCTGGGTAAGAATGGGATTCTTGTTTTTCCTTTaGTCAACGATACTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HLLSSRHWALHGGWVRMGFLFFL*STILST Trigger: GGTGGAAAGTATCGTTGACAAAAGGAAAAACAAGAA...TCCCATTCTTACCCAGCCACCGTGAAGAGCCCAGTGTCTGGAGGAAAGCAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCGCTTTGGAGTTGGTCTaGGAGAGAGTGCTGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: STRLVLSLIRTVFSIEVLALELV*ERVLWV Trigger: CACCCACAGCACTCTCTCCAAGACCAACTCCAAAGC...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TTTCAGCAGAAACCCACGCCCCCGTGGGTGGGATTTTCCATCAGTGATGCTTTTTATTCTCTGACGATTTaGTGGATAACAAGATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FQQKPTPPWVGFSISDAFYSLTI*WITRCG Trigger: CCCACATCTTGTTATCCACAAAATCGTCAGAGAATA...AAAAGCATCACTGATGGAAAATCCCACCCACGGGGGCGTGGGTTTCTGCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCCCGCTTGTCAAAAGGTaGGTCTCTTCTGTCGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: STRLVLSLIRTVFSIEVLPLVKR*VSSVVN Trigger: ATTGACGACAGAAGAGACCAACCTTTTGACAAGCGG...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS-3UTR CAA 90 bp | TCTACCAGGTTGGTCTTAAGTTTGATCAGAACTGTTTTCAGCATTGAGGTACTCGTTATCATCAGTAGGTaGTTCAGCTTTCTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: STRLVLSLIRTVFSIEVLVIISR*FSFLWK Trigger: CTTCCAGAGAAAGCTGAACAACCTACTGATGATAAC...GAGTACCTCAATGCTGAAAACAGTTCTGATCAAACTTAAGACCAACCTGGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075220.14 |
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| CDS GCA 72 bp | CGCACCAGGGCCCAGCAAAGCCCCAGTGGGCTTCTCTaGAGTCACCTCTGGGGCTACAGTGTCCTCGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RTRAQQSPSGLL*SHLWGYSVLGT Trigger: GGTGCCGAGGACACTGTAGCCCCAGAGGTGACTGCAGAGAAGCCCACTGGGGCTTTGCTGGGCCCTGGTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS CAA 72 bp | GTGCTGTGGGTGGACCTGGAAATCTGCTTCCGGGCGTaGCTGGGGGAGGCTCTGCTGGCACGAGCCAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: VLWVDLEICFRA*LGEALLARARL Trigger: TAGCCTGGCTCGTGCCAGCAGAGCCTCCCCCAGCAACGCCCGGAAGCAGATTTCCAGGTCCACCCACAGCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS CCA 72 bp | TGTGGGTGGACCTGGAAATCTGCTTCCGGGCGTTGCTaGGGGAGGCTCTGCTGGCACGAGCCAGGCTACCTT | + |
|
Preference number: 6 (lower is better) Translates to: CGWTWKSASGRC*GRLCWHEPGYL Trigger: AAGGTAGCCTGGCTCGTGCCAGCAGAGCCTCCCCCAGCAACGCCCGGAAGCAGATTTCCAGGTCCACCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS GCA 72 bp | GTCTTGGAGAGAGTGCTGTGGGTGGACCTGGAAATCTaGTTCCGGGCGTTGCTGGGGGAGGCTCTGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLERVLWVDLEI*FRALLGEALLA Trigger: TGCCAGCAGAGCCTCCCCCAGCAACGCCCGGAAGCAGATTTCCAGGTCCACCCACAGCACTCTCTCCAAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS CCA 72 bp | CAGCAAAGCCCCAGTGGGCTTCTCTGCAGTCACCTCTaGGGCTACAGTGTCCTCGGCACCCTGATCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: QQSPSGLLCSHL*GYSVLGTLIHR Trigger: CCTGTGGATCAGGGTGCCGAGGACACTGTAGCCCCAGAGGTGACTGCAGAGAAGCCCACTGGGGCTTTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS GCA 72 bp | TGGAAATCTGCTTCCGGGCGTTGCTGGGGGAGGCTCTaGTGGCACGAGCCAGGCTACCTTCCTTTTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: WKSASGRCWGRL*WHEPGYLPFAS Trigger: AGAGGCAAAAGGAAGGTAGCCTGGCTCGTGCCAGCAGAGCCTCCCCCAGCAACGCCCGGAAGCAGATTTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS CCA 72 bp | TGGAGTTGGTCTTGGAGAGAGTGCTGTGGGTGGACCTaGAAATCTGCTTCCGGGCGTTGCTGGGGGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WSWSWRECCGWT*KSASGRCWGRL Trigger: GAGCCTCCCCCAGCAACGCCCGGAAGCAGATTTCCAGGTCCACCCACAGCACTCTCTCCAAGACCAACTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS GCA 72 bp | GAGGCTCTGCTGGCACGAGCCAGGCTACCTTCCTTTTaGCTCTCGTTGTGGCGCCGGTTGAAGTCATGGATG | + |
|
Preference number: 6 (lower is better) Translates to: EALLARARLPSF*LSLWRRLKSWM Trigger: CATCCATGACTTCAACCGGCGCCACAACGAGAGGCAAAAGGAAGGTAGCCTGGCTCGTGCCAGCAGAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS CAA 72 bp | GGAGGCTCTGCTGGCACGAGCCAGGCTACCTTCCTTTaGCCTCTCGTTGTGGCGCCGGTTGAAGTCATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GGSAGTSQATFL*PLVVAPVEVMD Trigger: ATCCATGACTTCAACCGGCGCCACAACGAGAGGCAAAAGGAAGGTAGCCTGGCTCGTGCCAGCAGAGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS GCA 72 bp | TTGCTGTCGTCGGCTGCAGCTGTGCTCAGGGCGCTCTaGACTTCTTTCATCACCTCTGGGTTTAGTGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LLSSAAAVLRAL*TSFITSGFSEL Trigger: TAACTCACTAAACCCAGAGGTGATGAAAGAAGTGCAGAGCGCCCTGAGCACAGCTGCAGCCGACGACAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS TCA 72 bp | CGCGTCTTGAATTGCAGGGGACGCTTGATCGGGTTCTaGGACTGTTGCAGGAACCACATTATTTTGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RVLNCRGRLIGF*DCCRNHIILLA Trigger: TGCCAGCAAAATAATGTGGTTCCTGCAACAGTCTCAGAACCCGATCAAGCGTCCCCTGCAATTCAAGACGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000225602.2 |
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| CDS CCA 72 bp | GATCTTTGCCTACCACAAGTGCTTTGGAGTTGGTCTTaGAGAGAGTGCTGTGGGTGGACCTGGAAATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DLCLPQVLWSWS*RECCGWTWKSA Trigger: AGCAGATTTCCAGGTCCACCCACAGCACTCTCTCCAAGACCAACTCCAAAGCACTTGTGGTAGGCAAAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS CCA 72 bp | GTAGGTTGTTCAGCTTTCTCTGGAAGTGTGCAGAGCTaGGCTTCCTGTGAATTAGGCTGGCTATTGCCTATG | + |
|
Preference number: 6 (lower is better) Translates to: VGCSAFSGSVQS*ASCELGWLLPM Trigger: CATAGGCAATAGCCAGCCTAATTCACAGGAAGCCCAGCTCTGCACACTTCCAGAGAAAGCTGAACAACCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000225602.2 |
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| CDS CCA 72 bp | ACTCATGATCTTTGCCTACCACAAGTGCTTTGGAGTTaGTCTTGGAGAGAGTGCTGTGGGTGGACCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: THDLCLPQVLWS*SWRECCGWTWK Trigger: TTTCCAGGTCCACCCACAGCACTCTCTCCAAGACCAACTCCAAAGCACTTGTGGTAGGCAAAGATCATGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000163595.3 |
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| CDS CAA 72 bp | CACATTATTTTGCTGGCAGGTGTTATCATCAGTAGGTaGTTCAGCTTTCTCTGGAAGTGTGCAGAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HIILLAGVIISR*FSFLWKCAELG Trigger: GCCCAGCTCTGCACACTTCCAGAGAAAGCTGAACAACCTACTGATGATAACACCTGCCAGCAAAATAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075220.14 ENSMUST00000225602.2 |
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