Pregenerated sensors for CDV3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032803Ensembl transcript IDs: ENSMUST00000035484.11, ENSMUST00000072249.13, ENSMUST00000116517.9, ENSMUST00000189875.8, ENSMUST00000189896.2, ENSMUST00000190226.7
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGGTCAGGTGACACTGGCCTCCACCTCCTGCTTCCTACACTGCTaGCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCA | + |
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Preference number: 1 (lower is better) Translates to: SGQVTLASTSCFLHC*PKSTKHALKLGKHP Trigger: TGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCAGCAGTGTAGGAAGCAGGAGGTGGAGGCCAGTGTCACCTGACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR GCA 90 bp | CAGTCTGGTCAGGTGACACTGGCCTCCACCTCCTGCTTCCTACACTaGTGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACAT | + |
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Preference number: 1 (lower is better) Translates to: QSGQVTLASTSCFLH*CPKSTKHALKLGKH Trigger: ATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCAGCAGTGTAGGAAGCAGGAGGTGGAGGCCAGTGTCACCTGACCAGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR CCA 90 bp | GGTTCAGATCATGCCAACATTATTGCTCTGAAGTGGCATACAGTCTaGTCAGGTGACACTGGCCTCCACCTCCTGCTTCCTACACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: GSDHANIIALKWHTV*SGDTGLHLLLPTLL Trigger: CAGCAGTGTAGGAAGCAGGAGGTGGAGGCCAGTGTCACCTGACCAGACTGTATGCCACTTCAGAGCAATAATGTTGGCATGATCTGAACC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR CCA 90 bp | CTTTGGGGGAGTGGTCTGATTAGATCAGGTACAGAAAGATGTGTGTaGCAAGTCACTGCTCTCCCAGAGTCCCCCACATGTGAGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: LWGSGLIRSGTERCV*QVTALPESPTCEDR Trigger: TCTGTCCTCACATGTGGGGGACTCTGGGAGAGCAGTGACTTGCCACACACATCTTTCTGTACCTGATCTAATCAGACCACTCCCCCAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
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| 3UTR TCA 90 bp | TCATGCCAACATTATTGCTCTGAAGTGGCATACAGTCTGGTCAGGTaGCACTGGCCTCCACCTCCTGCTTCCTACACTGCTGCCCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: SCQHYCSEVAYSLVR*HWPPPPASYTAALN Trigger: ATTTAGGGCAGCAGTGTAGGAAGCAGGAGGTGGAGGCCAGTGTCACCTGACCAGACTGTATGCCACTTCAGAGCAATAATGTTGGCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR TCA 90 bp | AAAACATCCATTTCCTGTTCCACTCCTGTCAGTAGTGAGCAAGTCTaGCCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAG | + |
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Preference number: 1 (lower is better) Translates to: KTSISCSTPVSSEQV*PVFGKGIRLQRETQ Trigger: CTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAGACTTGCTCACTACTGACAGGAGTGGAACAGGAAATGGATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR TCA 90 bp | CATCATTCAACAATTTCTCCTCCCTTTTGCTTTGGGGGAGTGGTCTaGTTAGATCAGGTACAGAAAGATGTGTGTGGCAAGTCACTGCTC | + |
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Preference number: 1 (lower is better) Translates to: HHSTISPPFCFGGVV*LDQVQKDVCGKSLL Trigger: GAGCAGTGACTTGCCACACACATCTTTCTGTACCTGATCTAATCAGACCACTCCCCCAAAGCAAAAGGGAGGAGAAATTGTTGAATGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
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| 3UTR GCA 90 bp | ATAACCTTCACATTTGGGGCACACACAAGGATTTATCAGACACCATaGCAGATTCATGCGCAACTTGGGTGTTTTGCTCCTGTTGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: ITFTFGAHTRIYQTP*QIHAQLGCFAPVAL Trigger: CAAAGCAACAGGAGCAAAACACCCAAGTTGCGCATGAATCTGGCATGGTGTCTGATAAATCCTTGTGTGTGCCCCAAATGTGAAGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR GCA 90 bp | ATTTGGGGCACACACAAGGATTTATCAGACACCATGCCAGATTCATaGGCAACTTGGGTGTTTTGCTCCTGTTGCTTTGAACTGTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: IWGTHKDLSDTMPDS*ATWVFCSCCFELLK Trigger: TTTTAACAGTTCAAAGCAACAGGAGCAAAACACCCAAGTTGCGCATGAATCTGGCATGGTGTCTGATAAATCCTTGTGTGTGCCCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR CCA 90 bp | CAAGTAATGTTCTCATCATTCAACAATTTCTCCTCCCTTTTGCTTTaGGGGAGTGGTCTGATTAGATCAGGTACAGAAAGATGTGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: QVMFSSFNNFSSLLL*GSGLIRSGTERCVW Trigger: CCACACACATCTTTCTGTACCTGATCTAATCAGACCACTCCCCCAAAGCAAAAGGGAGGAGAAATTGTTGAATGATGAGAACATTACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
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| 3UTR TCA 90 bp | ACTGAAGCTCCGAGGTCCCATCTTCTGCATATTTTGGGACCAACTTaGAAACAACCAGAAAGAAGCTGTATAATGACATTCCTTCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: TEAPRSHLLHILGPT*KQPERSCIMTFLLR Trigger: TCTTAGAAGGAATGTCATTATACAGCTTCTTTCTGGTTGTTTTCAAGTTGGTCCCAAAATATGCAGAAGATGGGACCTCGGAGCTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCACAGCAGTGAGCAGACGCCACACTCTGTCCACAGCAGTTCAATTAGACTGTGTGGCAAGTCACTaGTCTCCCAGAGTCCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: LSTAVSRRHTLSTAVQLDCVASH*SPRVPH Trigger: GTGGGGGACTCTGGGAGAGCAGTGACTTGCCACACA...GTCTAATTGAACTGCTGTGGACAGAGTGTGGCGTCTGCTCACTGCTGTGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGAGTCTAACACAGCCACAGCCTACAGAGTATGCCTTAGGATGGGGCACAGACAGTCACTGGACTTaGGGTCTTCAGTCAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: PGSLTQPQPTEYALGWGTDSHWT*GLQSVT Trigger: AGTGACTGACTGAAGACCTCAAGTCCAGTGACTGTC...TGTGCCCCATCCTAAGGCATACTCTGTAGGCTGTGGCTGTGTTAGACTCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAGTGCAGCGGATCCGCTGTCCTTTATATGCATCAAAGGCTATCTGGTTCAGAGTCCCCCACATGTaGGGACAGAACGGAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PGVQRIRCPLYASKAIWFRVPHM*GQNGEA Trigger: TGCTTCTCCGTTCTGTCCTCACATGTGGGGGACTCT...GAACCAGATAGCCTTTGATGCATATAAAGGACAGCGGATCCGCTGCACTCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTGGCTCAGAACCCAGATaGCTGACTTCTGAAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSGSEPR*LTSEGF Trigger: AAAGCCTTCAGAAGTCAGCCATCTGGGTTCTGAGCC...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTGTGCTCTCAACGAGGTaGAAAGGCTGGGATTTACTT | + |
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Preference number: 2 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSVLSTR*KGWDLL Trigger: AAGTAAATCCCAGCCTTTTCACCTCGTTGAGAGCAC...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGTGCAGCGGATCCGCTGTCCTTTATATGCATCAAAGGCTATCTGGTTCCACCCACTCCCCATTTaGTGGACCAGAGTTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: PGVQRIRCPLYASKAIWFHPLPI*WTRVWL Trigger: CAACCAAACTCTGGTCCACCAAATGGGGAGTGGGTG...GAACCAGATAGCCTTTGATGCATATAAAGGACAGCGGATCCGCTGCACTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR CCA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTACAGAAAGATGTGTGTaGCAAGTCACTGCTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSTERCV*QVTALP Trigger: TGGGAGAGCAGTGACTTGCCACACACATCTTTCTGT...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTGAACATAAAGATGTTTaGATGACCACTGGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSEHKDV*MTTGCR Trigger: CCTGCAGCCAGTGGTCATTCAAACATCTTTATGTTC...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGAGTCTAACACAGCCACAGCCTACAGAGTATGCCTTAGGATGGGGCACAGAACATAAAGATGTTTaGATGACCACTGGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PGSLTQPQPTEYALGWGTEHKDV*MTTGCR Trigger: CCTGCAGCCAGTGGTCATTCAAACATCTTTATGTTC...TGTGCCCCATCCTAAGGCATACTCTGTAGGCTGTGGCTGTGTTAGACTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTGGACCAGAGTTTGGTTaGATTAAATCCAGTTACCGC | + |
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Preference number: 2 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSGPEFG*IKSSYR Trigger: GCGGTAACTGGATTTAATTCAACCAAACTCTGGTCC...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGAGTCTAACACAGCCACAGCCTACAGAGTATGCCTTAGGATGGGGCACAGAGCTGGCTAAACAATaGATAGCCCATAACCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PGSLTQPQPTEYALGWGTELAKQ*IAHNLH Trigger: GTGAAGGTTATGGGCTATTCATTGTTTAGCCAGCTC...TGTGCCCCATCCTAAGGCATACTCTGTAGGCTGTGGCTGTGTTAGACTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGAGTCTAACACAGCCACAGCCTACAGAGTATGCCTTAGGATGGGGCACAGCAACTTGGGTGTTTTaGTCCTGTTGCTTTGAACTG | + |
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Preference number: 2 (lower is better) Translates to: PGSLTQPQPTEYALGWGTATWVF*SCCFEL Trigger: CAGTTCAAAGCAACAGGAGCAAAACACCCAAGTTGC...TGTGCCCCATCCTAAGGCATACTCTGTAGGCTGTGGCTGTGTTAGACTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGAGTCTAACACAGCCACAGCCTACAGAGTATGCCTTAGGATGGGGCACAGAGTATGCCTTAGGATaGGGCACAGAACAGGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: PGSLTQPQPTEYALGWGTEYALG*GTEQVN Trigger: ATTAACCTGTTCTGTGCCCCATCCTAAGGCATACTC...TGTGCCCCATCCTAAGGCATACTCTGTAGGCTGTGGCTGTGTTAGACTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGAGTCTAACACAGCCACAGCCTACAGAGTATGCCTTAGGATGGGGCACACAGAAATCAAAACGATaGATGGCTGTTCTTGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: PGSLTQPQPTEYALGWGTQKSKR*MAVLGG Trigger: ACCACCAAGAACAGCCATTCATCGTTTTGATTTCTG...TGTGCCCCATCCTAAGGCATACTCTGTAGGCTGTGGCTGTGTTAGACTCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTCAGAAATCAAAACGATaGATGGCTGTTCTTGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSQKSKR*MAVLGG Trigger: ACCACCAAGAACAGCCATTCATCGTTTTGATTTCTG...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR GCA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTCCGCTGTCCTTTATATaGATCAAAGGCTATCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSPLSFI*IKGYLV Trigger: AACCAGATAGCCTTTGATGCATATAAAGGACAGCGG...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTTGTGTGGCAAGTCACTaGTCTCCCAGAGTCCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: CPKSTKHALKLGKHPFPVCVASH*SPRVPH Trigger: GTGGGGGACTCTGGGAGAGCAGTGACTTGCCACACA...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGTGCAGCGGATCCGCTGTCCTTTATATGCATCAAAGGCTATCTGGTTCGAGTATGCCTTAGGATaGGGCACAGAACAGGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: PGVQRIRCPLYASKAIWFEYALG*GTEQVN Trigger: ATTAACCTGTTCTGTGCCCCATCCTAAGGCATACTC...GAACCAGATAGCCTTTGATGCATATAAAGGACAGCGGATCCGCTGCACTCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR CCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTCAACCTCCTCCTGGCTaGTTCAGATCATGCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSQPPPG*FRSCQH Trigger: ATGTTGGCATGATCTGAACCAGCCAGGAGGAGGTTG...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAGTGCAGCGGATCCGCTGTCCTTTATATGCATCAAAGGCTATCTGGTTCATAAAGATGTTTGAATaGCCACTGGCTGCAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PGVQRIRCPLYASKAIWFIKMFE*PLAAGL Trigger: CAAACCTGCAGCCAGTGGTCATTCAAACATCTTTAT...GAACCAGATAGCCTTTGATGCATATAAAGGACAGCGGATCCGCTGCACTCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTGAAATGCTACATTACTaGCTATTCCCCTGCGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSEMLHY*LFPCVS Trigger: GGAGACGCAGGGGAATAGTCAGTAATGTAGCATTTC...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR GCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTACCATGCCAGATTCATaGGCAACTTGGGTGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSTMPDS*ATWVFC Trigger: GCAAAACACCCAAGTTGCGCATGAATCTGGCATGGT...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCACAGCAGTGAGCAGACGCCACACTCTGTCCACAGCAGTTCAATTAGACGTTCCACCTAAGGATTaGCAAATTCATAGGGCATTT | + |
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Preference number: 2 (lower is better) Translates to: LSTAVSRRHTLSTAVQLDVPPKD*QIHRAF Trigger: AAATGCCCTATGAATTTGCCAATCCTTAGGTGGAAC...GTCTAATTGAACTGCTGTGGACAGAGTGTGGCGTCTGCTCACTGCTGTGGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTGAACATAAAGATGTTTaGATGACCACTGGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSEHKDV*MTTGCR Trigger: CCTGCAGCCAGTGGTCATTCAAACATCTTTATGTTC...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTTTGCTCCTGTTGCTTTaGACTGTTAAAAGCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSLLLLL*TVKSQV Trigger: GACCTGGCTTTTAACAGTTCAAAGCAACAGGAGCAA...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTAGTAGTGAGCAAGTCTaGCCTGTGTTTGGCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFSSEQV*PVFGKG Trigger: CCCTTTGCCAAACACAGGTCAGACTTGCTCACTACT...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR TCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTTTTGGGGGAGTGGTCTaGTTAGATCAGGTACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSFGGVV*LDQVQK Trigger: TTTCTGTACCTGATCTAATCAGACCACTCCCCCAAA...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGTACAGTATGCCATTAAACAAACCTCATCATGTTTCTGTTCACGTCTTACTGGCCTCCACCTCCTaGTTCCTACACTGCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: FQYSMPLNKPHHVSVHVLLASTS*FLHCCP Trigger: AGGGCAGCAGTGTAGGAAGCAGGAGGTGGAGGCCAG...TAAGACGTGAACAGAAACATGATGAGGTTTGTTTAATGGCATACTGTACTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGTGCAGCGGATCCGCTGTCCTTTATATGCATCAAAGGCTATCTGGTTCAATCAAAACGATGAATaGCTGTTCTTGGTGGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: PGVQRIRCPLYASKAIWFNQNDE*LFLVVS Trigger: GCTAACCACCAAGAACAGCCATTCATCGTTTTGATT...GAACCAGATAGCCTTTGATGCATATAAAGGACAGCGGATCCGCTGCACTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| 3UTR-3UTR CCA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTCACTCAACCTCCTCCTaGCTGGTTCAGATCATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: CPKSTKHALKLGKHPFPVHSTSS*LVQIMP Trigger: TGGCATGATCTGAACCAGCCAGGAGGAGGTTGAGTG...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGGAGTCTAACACAGCCACAGCCTACAGAGTATGCCTTAGGATGGGGCACAATCTTCTGCATATTTTaGGACCAACTTGAAAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: PGSLTQPQPTEYALGWGTIFCIF*DQLENN Trigger: GTTGTTTTCAAGTTGGTCCCAAAATATGCAGAAGAT...TGTGCCCCATCCTAAGGCATACTCTGTAGGCTGTGGCTGTGTTAGACTCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTATCTTCTGCATATTTTaGGACCAACTTGAAAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSIFCIF*DQLENN Trigger: GTTGTTTTCAAGTTGGTCCCAAAATATGCAGAAGAT...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTTGTGTGTCACGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGAACATAAAGATGTTTaGATGACCACTGGCTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VCVSRWSEAYFKGSLWLKEHKDV*MTTGCR Trigger: CCTGCAGCCAGTGGTCATTCAAACATCTTTATGTTC...CTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTAGTAGTGAGCAAGTCTaGCCTGTGTTTGGCAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: CPKSTKHALKLGKHPFPVSSEQV*PVFGKG Trigger: CCCTTTGCCAAACACAGGTCAGACTTGCTCACTACT...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTCATGTAATACTGTACTaGAGCTCCGAGGTCCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFHVILY*SSEVPS Trigger: AGATGGGACCTCGGAGCTTCAGTACAGTATTACATG...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR GCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTACCATGCCAGATTCATaGGCAACTTGGGTGTTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFTMPDS*ATWVFC Trigger: GCAAAACACCCAAGTTGCGCATGAATCTGGCATGGT...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTTGCTTCCTACACTGCTaGCCTAAATCCACTAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSCFLHC*PKSTKH Trigger: ATGTTTAGTGGATTTAGGGCAGCAGTGTAGGAAGCA...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTGGCTGGTTCAGATCATaGCAACATTATTGCTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSGWFRS*QHYCSE Trigger: TTCAGAGCAATAATGTTGGCATGATCTGAACCAGCC...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTAACATGCTCTCAAGCTaGGAAAACATCCATTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSNMLSS*ENIHFL Trigger: CAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTT...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTGGACCAGAGTTTGGTTaGATTAAATCCAGTTACCGC | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFGPEFG*IKSSYR Trigger: GCGGTAACTGGATTTAATTCAACCAAACTCTGGTCC...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTTTGCTCCTGTTGCTTTaGACTGTTAAAAGCCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFLLLLL*TVKSQV Trigger: GACCTGGCTTTTAACAGTTCAAAGCAACAGGAGCAA...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TCAAAGCAAGGCCTTAATGTGGAACCGAACAAGCACTATCTGAATGAAAAATTAAGAGTCCCCCACATGTaGGGACAGAACGGAGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SKQGLNVEPNKHYLNEKLRVPHM*GQNGEA Trigger: TGCTTCTCCGTTCTGTCCTCACATGTGGGGGACTCT...TAATTTTTCATTCAGATAGTGCTTGTTCGGTTCCACATTAAGGCCTTGCTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAGTCTTCAGTTCAACTAAGAATCTCAAGCCTCTAATCACTCAACCTCCTCCTACCATGCCAGATTCATaGGCAACTTGGGTGTTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: EVFSSTKNLKPLITQPPPTMPDS*ATWVFC Trigger: GCAAAACACCCAAGTTGCGCATGAATCTGGCATGGT...AGGAGGAGGTTGAGTGATTAGAGGCTTGAGATTCTTAGTTGAACTGAAGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTATTTATCAGACACCATaGCAGATTCATGCGCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSIYQTP*QIHAQL Trigger: AAGTTGCGCATGAATCTGGCATGGTGTCTGATAAAT...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTAATTCAAGCCAGCTGTaGTCTCAACGAGGTGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFNSSQL*SQRGEK Trigger: CTTTTCACCTCGTTGAGAGCACAGCTGGCTTGAATT...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTCTTCAGTTCAACTAAGAATCTCAAGCCTCTAATCACTCAACCTCCTCCTGATTCATGCGCAACTTaGGTGTTTTGCTCCTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: EVFSSTKNLKPLITQPPPDSCAT*VFCSCC Trigger: GCAACAGGAGCAAAACACCCAAGTTGCGCATGAATC...AGGAGGAGGTTGAGTGATTAGAGGCTTGAGATTCTTAGTTGAACTGAAGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTCTTCAGTTCAACTAAGAATCTCAAGCCTCTAATCACTCAACCTCCTCCTGAGCTGGCTAAACAATaGATAGCCCATAACCTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: EVFSSTKNLKPLITQPPPELAKQ*IAHNLH Trigger: GTGAAGGTTATGGGCTATTCATTGTTTAGCCAGCTC...AGGAGGAGGTTGAGTGATTAGAGGCTTGAGATTCTTAGTTGAACTGAAGACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTTTTGGGGGAGTGGTCTaGTTAGATCAGGTACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: CPKSTKHALKLGKHPFPVFGGVV*LDQVQK Trigger: TTTCTGTACCTGATCTAATCAGACCACTCCCCCAAA...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR GCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTCCGCTGTCCTTTATATaGATCAAAGGCTATCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFPLSFI*IKGYLV Trigger: AACCAGATAGCCTTTGATGCATATAAAGGACAGCGG...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | GTTTGTGTGTCACGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTTTGCTCCTGTTaGTTTGAACTGTTAAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: VCVSRWSEAYFKGSLWLKVFCSC*FELLKA Trigger: GGCTTTTAACAGTTCAAAGCAACAGGAGCAAAACAC...CTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | GTTTGTGTGTCACGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGATTTATCAGACACCATaGCAGATTCATGCGCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: VCVSRWSEAYFKGSLWLKIYQTP*QIHAQL Trigger: AAGTTGCGCATGAATCTGGCATGGTGTCTGATAAAT...CTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTTGCTTCCTACACTGCTaGCCTAAATCCACTAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFCFLHC*PKSTKH Trigger: ATGTTTAGTGGATTTAGGGCAGCAGTGTAGGAAGCA...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | GTTTGTGTGTCACGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGTCATGCCAACATTATTaGTCTGAAGTGGCATACAGT | + |
|
Preference number: 2 (lower is better) Translates to: VCVSRWSEAYFKGSLWLKSCQHY*SEVAYS Trigger: ACTGTATGCCACTTCAGAGCAATAATGTTGGCATGA...CTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGTGTGTCACGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGAATCAAAACGATGAATaGCTGTTCTTGGTGGTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: VCVSRWSEAYFKGSLWLKNQNDE*LFLVVS Trigger: GCTAACCACCAAGAACAGCCATTCATCGTTTTGATT...CTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGACAATATGCCCTTAAAGAACTTACTCTGAGTCAAAGCAAGGCCTTAATGGGCTCAGAACCCAGATaGCTGACTTCTGAAGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FRQYALKELTLSQSKALMGSEPR*LTSEGF Trigger: AAAGCCTTCAGAAGTCAGCCATCTGGGTTCTGAGCC...CATTAAGGCCTTGCTTTGACTCAGAGTAAGTTCTTTAAGGGCATATTGTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTCTTCAGTTCAACTAAGAATCTCAAGCCTCTAATCACTCAACCTCCTCCTGAGTATGCCTTAGGATaGGGCACAGAACAGGTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: EVFSSTKNLKPLITQPPPEYALG*GTEQVN Trigger: ATTAACCTGTTCTGTGCCCCATCCTAAGGCATACTC...AGGAGGAGGTTGAGTGATTAGAGGCTTGAGATTCTTAGTTGAACTGAAGACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATCACCCACTCCCCATTTaGTGGACCAGAGTTTGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNHPLPI*WTRVWL Trigger: CAACCAAACTCTGGTCCACCAAATGGGGAGTGGGTG...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTAGTCTGACCTGTGTTTaGCAAAGGGATTCGTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFSLTCV*QRDSFT Trigger: TGTAAACGAATCCCTTTGCCAAACACAGGTCAGACT...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTAACATGCTCTCAAGCTaGGAAAACATCCATTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFNMLSS*ENIHFL Trigger: CAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTT...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTTTTAAGGGAAGTTTGTaGCTCAAGGTGTTAACGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LTCVWQRDSFTERNPGTSFKGSL*LKVLTF Trigger: AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAA...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTGTTTGTGTGTCACGCTaGAGTGAAGCATACTTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFVCVSR*SEAYFK Trigger: CTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATGACAGTCACTGGACTTaGGGTCTTCAGTCAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNDSHWT*GLQSVT Trigger: AGTGACTGACTGAAGACCTCAAGTCCAGTGACTGTC...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTCTTCAGTTCAACTAAGAATCTCAAGCCTCTAATCACTCAACCTCCTCCTATAAAGATGTTTGAATaGCCACTGGCTGCAGGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: EVFSSTKNLKPLITQPPPIKMFE*PLAAGL Trigger: CAAACCTGCAGCCAGTGGTCATTCAAACATCTTTAT...AGGAGGAGGTTGAGTGATTAGAGGCTTGAGATTCTTAGTTGAACTGAAGACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGACAATATGCCCTTAAAGAACTTACTCTGAGTCAAAGCAAGGCCTTAATGCAGATGGCTGACTTCTaGAGGCTTTCTGACAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: FRQYALKELTLSQSKALMQMADF*RLSDRN Trigger: ATTCCTGTCAGAAAGCCTTCAGAAGTCAGCCATCTG...CATTAAGGCCTTGCTTTGACTCAGAGTAAGTTCTTTAAGGGCATATTGTCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTATAGAGTATGTGTACTaGACCATCTGTAGTGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFIEYVY*TICSDK Trigger: CTTGTCACTACAGATGGTTCAGTACACATACTCTAT...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTTGCTTCCTACACTGCTaGCCTAAATCCACTAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: CPKSTKHALKLGKHPFPVCFLHC*PKSTKH Trigger: ATGTTTAGTGGATTTAGGGCAGCAGTGTAGGAAGCA...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTAGTCTGACCTGTGTTTaGCAAAGGGATTCGTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: CPKSTKHALKLGKHPFPVSLTCV*QRDSFT Trigger: TGTAAACGAATCCCTTTGCCAAACACAGGTCAGACT...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTCTTCAGTTCAACTAAGAATCTCAAGCCTCTAATCACTCAACCTCCTCCTAGTCTGACCTGTGTTTaGCAAAGGGATTCGTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: EVFSSTKNLKPLITQPPPSLTCV*QRDSFT Trigger: TGTAAACGAATCCCTTTGCCAAACACAGGTCAGACT...AGGAGGAGGTTGAGTGATTAGAGGCTTGAGATTCTTAGTTGAACTGAAGACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATCAACCTCCTCCTGGCTaGTTCAGATCATGCCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNQPPPG*FRSCQH Trigger: ATGTTGGCATGATCTGAACCAGCCAGGAGGAGGTTG...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTGTTTGTGTGTCACGCTaGAGTGAAGCATACTTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: CPKSTKHALKLGKHPFPVVCVSR*SEAYFK Trigger: CTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGACAATATGCCCTTAAAGAACTTACTCTGAGTCAAAGCAAGGCCTTAATGACAGAAAGATGTGTGTaGCAAGTCACTGCTCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: FRQYALKELTLSQSKALMTERCV*QVTALP Trigger: TGGGAGAGCAGTGACTTGCCACACACATCTTTCTGT...CATTAAGGCCTTGCTTTGACTCAGAGTAAGTTCTTTAAGGGCATATTGTCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR TCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATCAGATGGCTGACTTCTaGAGGCTTTCTGACAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNQMADF*RLSDRN Trigger: ATTCCTGTCAGAAAGCCTTCAGAAGTCAGCCATCTG...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTATAGAGTATGTGTACTaGACCATCTGTAGTGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: CPKSTKHALKLGKHPFPVIEYVY*TICSDK Trigger: CTTGTCACTACAGATGGTTCAGTACACATACTCTAT...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAGTACAGTATGCCATTAAACAAACCTCATCATGTTTCTGTTCACGTCTTAGTGCTCTCAACGAGGTaGAAAGGCTGGGATTTACTT | + |
|
Preference number: 2 (lower is better) Translates to: FQYSMPLNKPHHVSVHVLVLSTR*KGWDLL Trigger: AAGTAAATCCCAGCCTTTTCACCTCGTTGAGAGCAC...TAAGACGTGAACAGAAACATGATGAGGTTTGTTTAATGGCATACTGTACTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR TCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATCATGTAATACTGTACTaGAGCTCCGAGGTCCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNHVILY*SSEVPS Trigger: AGATGGGACCTCGGAGCTTCAGTACAGTATTACATG...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGACAATATGCCCTTAAAGAACTTACTCTGAGTCAAAGCAAGGCCTTAATGAATTCAAGCCAGCTGTaGTCTCAACGAGGTGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FRQYALKELTLSQSKALMNSSQL*SQRGEK Trigger: CTTTTCACCTCGTTGAGAGCACAGCTGGCTTGAATT...CATTAAGGCCTTGCTTTGACTCAGAGTAAGTTCTTTAAGGGCATATTGTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTAATCAAAACGATGAATaGCTGTTCTTGGTGGTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: CPKSTKHALKLGKHPFPVNQNDE*LFLVVS Trigger: GCTAACCACCAAGAACAGCCATTCATCGTTTTGATT...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATGATTCATGCGCAACTTaGGTGTTTTGCTCCTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNDSCAT*VFCSCC Trigger: GCAACAGGAGCAAAACACCCAAGTTGCGCATGAATC...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TCAAAGCAAGGCCTTAATGTGGAACCGAACAAGCACTATCTGAATGAAAAATTAGGACCAGAGTTTGGTTaGATTAAATCCAGTTACCGC | + |
|
Preference number: 2 (lower is better) Translates to: SKQGLNVEPNKHYLNEKLGPEFG*IKSSYR Trigger: GCGGTAACTGGATTTAATTCAACCAAACTCTGGTCC...TAATTTTTCATTCAGATAGTGCTTGTTCGGTTCCACATTAAGGCCTTGCTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAGTACAGTATGCCATTAAACAAACCTCATCATGTTTCTGTTCACGTCTTATTGCTCCTGTTGCTTTaGACTGTTAAAAGCCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: FQYSMPLNKPHHVSVHVLLLLLL*TVKSQV Trigger: GACCTGGCTTTTAACAGTTCAAAGCAACAGGAGCAA...TAAGACGTGAACAGAAACATGATGAGGTTTGTTTAATGGCATACTGTACTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TCAAAGCAAGGCCTTAATGTGGAACCGAACAAGCACTATCTGAATGAAAAATTATTGCTCCTGTTGCTTTaGACTGTTAAAAGCCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SKQGLNVEPNKHYLNEKLLLLLL*TVKSQV Trigger: GACCTGGCTTTTAACAGTTCAAAGCAACAGGAGCAA...TAATTTTTCATTCAGATAGTGCTTGTTCGGTTCCACATTAAGGCCTTGCTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATGCAACTTGGGTGTTTTaGTCCTGTTGCTTTGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNATWVF*SCCFEL Trigger: CAGTTCAAAGCAACAGGAGCAAAACACCCAAGTTGC...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TTCCAGTACAGTATGCCATTAAACAAACCTCATCATGTTTCTGTTCACGTCTTAGAGTATGCCTTAGGATaGGGCACAGAACAGGTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: FQYSMPLNKPHHVSVHVLEYALG*GTEQVN Trigger: ATTAACCTGTTCTGTGCCCCATCCTAAGGCATACTC...TAAGACGTGAACAGAAACATGATGAGGTTTGTTTAATGGCATACTGTACTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TTCCAGTACAGTATGCCATTAAACAAACCTCATCATGTTTCTGTTCACGTCTTAAGCAAGGCCTTAATGTaGAACCGAACAAGCACTATC | + |
|
Preference number: 2 (lower is better) Translates to: FQYSMPLNKPHHVSVHVLSKALM*NRTSTI Trigger: GATAGTGCTTGTTCGGTTCCACATTAAGGCCTTGCT...TAAGACGTGAACAGAAACATGATGAGGTTTGTTTAATGGCATACTGTACTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATAGCAAGGCCTTAATGTaGAACCGAACAAGCACTATC | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNSKALM*NRTSTI Trigger: GATAGTGCTTGTTCGGTTCCACATTAAGGCCTTGCT...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATCAGAAATCAAAACGATaGATGGCTGTTCTTGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNQKSKR*MAVLGG Trigger: ACCACCAAGAACAGCCATTCATCGTTTTGATTTCTG...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TCAAAGCAAGGCCTTAATGTGGAACCGAACAAGCACTATCTGAATGAAAAATTAATAAAGATGTTTGAATaGCCACTGGCTGCAGGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SKQGLNVEPNKHYLNEKLIKMFE*PLAAGL Trigger: CAAACCTGCAGCCAGTGGTCATTCAAACATCTTTAT...TAATTTTTCATTCAGATAGTGCTTGTTCGGTTCCACATTAAGGCCTTGCTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAGTACAGTATGCCATTAAACAAACCTCATCATGTTTCTGTTCACGTCTTACCGCTGTCCTTTATATaGATCAAAGGCTATCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: FQYSMPLNKPHHVSVHVLPLSFI*IKGYLV Trigger: AACCAGATAGCCTTTGATGCATATAAAGGACAGCGG...TAAGACGTGAACAGAAACATGATGAGGTTTGTTTAATGGCATACTGTACTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAGCAAGGCCTTAATGTGGAACCGAACAAGCACTATCTGAATGAAAAATTAAACATGCTCTCAAGCTaGGAAAACATCCATTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SKQGLNVEPNKHYLNEKLNMLSS*ENIHFL Trigger: CAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTT...TAATTTTTCATTCAGATAGTGCTTGTTCGGTTCCACATTAAGGCCTTGCTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR TCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATATAGAGTATGTGTACTaGACCATCTGTAGTGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNIEYVY*TICSDK Trigger: CTTGTCACTACAGATGGTTCAGTACACATACTCTAT...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAGTACAGTATGCCATTAAACAAACCTCATCATGTTTCTGTTCACGTCTTAGTGTTTTGCTCCTGTTaGTTTGAACTGTTAAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: FQYSMPLNKPHHVSVHVLVFCSC*FELLKA Trigger: GGCTTTTAACAGTTCAAAGCAACAGGAGCAAAACAC...TAAGACGTGAACAGAAACATGATGAGGTTTGTTTAATGGCATACTGTACTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAGCAAGGCCTTAATGTGGAACCGAACAAGCACTATCTGAATGAAAAATTAATTTATCAGACACCATaGCAGATTCATGCGCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: SKQGLNVEPNKHYLNEKLIYQTP*QIHAQL Trigger: AAGTTGCGCATGAATCTGGCATGGTGTCTGATAAAT...TAATTTTTCATTCAGATAGTGCTTGTTCGGTTCCACATTAAGGCCTTGCTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATTCATGCCAACATTATTaGTCTGAAGTGGCATACAGT | + |
|
Preference number: 2 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNSCQHY*SEVAYS Trigger: ACTGTATGCCACTTCAGAGCAATAATGTTGGCATGA...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAGCAAGGCCTTAATGTGGAACCGAACAAGCACTATCTGAATGAAAAATTAGTTCCACCTAAGGATTaGCAAATTCATAGGGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: SKQGLNVEPNKHYLNEKLVPPKD*QIHRAF Trigger: AAATGCCCTATGAATTTGCCAATCCTTAGGTGGAAC...TAATTTTTCATTCAGATAGTGCTTGTTCGGTTCCACATTAAGGCCTTGCTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAGTACAGTATGCCATTAAACAAACCTCATCATGTTTCTGTTCACGTCTTAGATAATACGTCTTTATaGATAAGGGCAACAATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: FQYSMPLNKPHHVSVHVLDNTSL*IRATIS Trigger: GGAAATTGTTGCCCTTATGCATAAAGACGTATTATC...TAAGACGTGAACAGAAACATGATGAGGTTTGTTTAATGGCATACTGTACTGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGAGTCTAACACAGCCACAGCCTACAGAGTATGCCTTAGGATGGGGCACACCACCCACTCCCCATTaGGTGGACCAGAGTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PGSLTQPQPTEYALGWGTPPTPH*VDQSLV Trigger: AACCAAACTCTGGTCCACCAAATGGGGAGTGGGTGG...TGTGCCCCATCCTAAGGCATACTCTGTAGGCTGTGGCTGTGTTAGACTCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCACAGCAGTGAGCAGACGCCACACTCTGTCCACAGCAGTTCAATTAGACCCACCCACTCCCCATTaGGTGGACCAGAGTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LSTAVSRRHTLSTAVQLDPPTPH*VDQSLV Trigger: AACCAAACTCTGGTCCACCAAATGGGGAGTGGGTGG...GTCTAATTGAACTGCTGTGGACAGAGTGTGGCGTCTGCTCACTGCTGTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR GCA 72 bp | GTGACACTGGCCTCCACCTCCTGCTTCCTACACTGCTaGCCTAAATCCACTAAACATGCTCTCAAGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VTLASTSCFLHC*PKSTKHALKLG Trigger: TCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCAGCAGTGTAGGAAGCAGGAGGTGGAGGCCAGTGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR GCA 72 bp | CAGGTGACACTGGCCTCCACCTCCTGCTTCCTACACTaGTGCCCTAAATCCACTAAACATGCTCTCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QVTLASTSCFLH*CPKSTKHALKL Trigger: CAGCTTGAGAGCATGTTTAGTGGATTTAGGGCAGCAGTGTAGGAAGCAGGAGGTGGAGGCCAGTGTCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGAGTCTAACACAGCCACAGCCTACAGAGTATGCCTTAGGATGGGGCACACCACTGGCTGCAGGTTaGGTTTTATACGCAGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PGSLTQPQPTEYALGWGTPLAAG*VLYAEQ Trigger: TTGCTCTGCGTATAAAACCAAACCTGCAGCCAGTGG...TGTGCCCCATCCTAAGGCATACTCTGTAGGCTGTGGCTGTGTTAGACTCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGAGTGCAGCGGATCCGCTGTCCTTTATATGCATCAAAGGCTATCTGGTTCCCACCCACTCCCCATTaGGTGGACCAGAGTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PGVQRIRCPLYASKAIWFPPTPH*VDQSLV Trigger: AACCAAACTCTGGTCCACCAAATGGGGAGTGGGTGG...GAACCAGATAGCCTTTGATGCATATAAAGGACAGCGGATCCGCTGCACTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR CCA 72 bp | CATGCCAACATTATTGCTCTGAAGTGGCATACAGTCTaGTCAGGTGACACTGGCCTCCACCTCCTGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HANIIALKWHTV*SGDTGLHLLLP Trigger: AGGAAGCAGGAGGTGGAGGCCAGTGTCACCTGACCAGACTGTATGCCACTTCAGAGCAATAATGTTGGCATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR TCA 72 bp | TCCTGGCTGGTTCAGATCATGCCAACATTATTGCTCTaGAGTGGCATACAGTCTGGTCAGGTGACACTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SWLVQIMPTLLL*SGIQSGQVTLA Trigger: GGCCAGTGTCACCTGACCAGACTGTATGCCACTTCAGAGCAATAATGTTGGCATGATCTGAACCAGCCAGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR GCA 72 bp | ATACAGTCTGGTCAGGTGACACTGGCCTCCACCTCCTaGTTCCTACACTGCTGCCCTAAATCCACTAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: IQSGQVTLASTS*FLHCCPKSTKH Trigger: ATGTTTAGTGGATTTAGGGCAGCAGTGTAGGAAGCAGGAGGTGGAGGCCAGTGTCACCTGACCAGACTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR CCA 72 bp | GCTGGTTCAGATCATGCCAACATTATTGCTCTGAAGTaGCATACAGTCTGGTCAGGTGACACTGGCCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AGSDHANIIALK*HTVWSGDTGLH Trigger: GTGGAGGCCAGTGTCACCTGACCAGACTGTATGCCACTTCAGAGCAATAATGTTGGCATGATCTGAACCAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR CCA 72 bp | AGTGGTCTGATTAGATCAGGTACAGAAAGATGTGTGTaGCAAGTCACTGCTCTCCCAGAGTCCCCCACATGT | + |
|
Preference number: 3 (lower is better) Translates to: SGLIRSGTERCV*QVTALPESPTC Trigger: ACATGTGGGGGACTCTGGGAGAGCAGTGACTTGCCACACACATCTTTCTGTACCTGATCTAATCAGACCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTCCACTGGCTGCAGGTTaGGTTTTATACGCAGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LTCVWQRDSFTERNPGTSPLAAG*VLYAEQ Trigger: TTGCTCTGCGTATAAAACCAAACCTGCAGCCAGTGG...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTTGTGGTCTAGTTACCTaGGAAGGCTTAGCAAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LTCVWQRDSFTERNPGTSCGLVT*EGLAKT Trigger: GGTCTTTGCTAAGCCTTCCAAGGTAACTAGACCACA...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCACAGCAGTGAGCAGACGCCACACTCTGTCCACAGCAGTTCAATTAGACTTGGTGGACCAGAGTTaGGTTGAATTAAATCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LSTAVSRRHTLSTAVQLDLVDQS*VELNPV Trigger: AACTGGATTTAATTCAACCAAACTCTGGTCCACCAA...GTCTAATTGAACTGCTGTGGACAGAGTGTGGCGTCTGCTCACTGCTGTGGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGACCTGTGTTTGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTAGATTCATGCGCAACTaGGGTGTTTTGCTCCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LTCVWQRDSFTERNPGTSRFMRN*GVLLLL Trigger: CAACAGGAGCAAAACACCCAAGTTGCGCATGAATCT...ACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGAGTCTAACACAGCCACAGCCTACAGAGTATGCCTTAGGATGGGGCACATATTTTGGGACCAACTaGAAAACAACCAGAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGSLTQPQPTEYALGWGTYFGTN*KTTRKK Trigger: CTTCTTTCTGGTTGTTTTCAAGTTGGTCCCAAAATA...TGTGCCCCATCCTAAGGCATACTCTGTAGGCTGTGGCTGTGTTAGACTCCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR GCA 72 bp | CCAGATTCATGCGCAACTTGGGTGTTTTGCTCCTGTTaGTTTGAACTGTTAAAAGCCAGGTCAGTGAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: PDSCATWVFCSC*FELLKARSVKP Trigger: GGGTTTCACTGACCTGGCTTTTAACAGTTCAAAGCAACAGGAGCAAAACACCCAAGTTGCGCATGAATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR GCA 72 bp | GACACCATGCCAGATTCATGCGCAACTTGGGTGTTTTaGTCCTGTTGCTTTGAACTGTTAAAAGCCAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: DTMPDSCATWVF*SCCFELLKARS Trigger: TGACCTGGCTTTTAACAGTTCAAAGCAACAGGAGCAAAACACCCAAGTTGCGCATGAATCTGGCATGGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR GCA 72 bp | CTAATCACTCAACCTCCTCCTGGCTGGTTCAGATCATaGCAACATTATTGCTCTGAAGTGGCATACAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LITQPPPGWFRS*QHYCSEVAYSL Trigger: CAGACTGTATGCCACTTCAGAGCAATAATGTTGGCATGATCTGAACCAGCCAGGAGGAGGTTGAGTGATTAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR TCA 72 bp | ACAATTTCTCCTCCCTTTTGCTTTGGGGGAGTGGTCTaGTTAGATCAGGTACAGAAAGATGTGTGTGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TISPPFCFGGVV*LDQVQKDVCGK Trigger: CTTGCCACACACATCTTTCTGTACCTGATCTAATCAGACCACTCCCCCAAAGCAAAAGGGAGGAGAAATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR CCA 72 bp | AATCTCAAGCCTCTAATCACTCAACCTCCTCCTGGCTaGTTCAGATCATGCCAACATTATTGCTCTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NLKPLITQPPPG*FRSCQHYCSEV Trigger: CACTTCAGAGCAATAATGTTGGCATGATCTGAACCAGCCAGGAGGAGGTTGAGTGATTAGAGGCTTGAGATT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTTGTGGTCTAGTTACCTaGGAAGGCTTAGCAAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: CPKSTKHALKLGKHPFPVCGLVT*EGLAKT Trigger: GGTCTTTGCTAAGCCTTCCAAGGTAACTAGACCACA...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | GTTTGTGTGTCACGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGTACTTTAAGGGAAGTTaGTGGCTCAAGGTGTTAACG | + |
|
Preference number: 3 (lower is better) Translates to: VCVSRWSEAYFKGSLWLKYFKGS*WLKVLT Trigger: CGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTA...CTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR GCA 72 bp | ACACACAAGGATTTATCAGACACCATGCCAGATTCATaGGCAACTTGGGTGTTTTGCTCCTGTTGCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: THKDLSDTMPDS*ATWVFCSCCFE Trigger: TTCAAAGCAACAGGAGCAAAACACCCAAGTTGCGCATGAATCTGGCATGGTGTCTGATAAATCCTTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR CCA 72 bp | ATAACCCCAAACAGAATCTGTGTTTGTGTGTCACGCTaGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ITPNRICVCVSR*SEAYFKGSLWL Trigger: GAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACACACAAACACAGATTCTGTTTGGGGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | GTTTGTGTGTCACGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGTTGGTGGACCAGAGTTaGGTTGAATTAAATCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VCVSRWSEAYFKGSLWLKLVDQS*VELNPV Trigger: AACTGGATTTAATTCAACCAAACTCTGGTCCACCAA...CTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR GCA 72 bp | TGTAATACTGTACTGAAGCTCCGAGGTCCCATCTTCTaGATATTTTGGGACCAACTTGAAAACAACCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CNTVLKLRGPIF*IFWDQLENNQK Trigger: TTTCTGGTTGTTTTCAAGTTGGTCCCAAAATATGCAGAAGATGGGACCTCGGAGCTTCAGTACAGTATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR CCA 72 bp | TTCTCATCATTCAACAATTTCTCCTCCCTTTTGCTTTaGGGGAGTGGTCTGATTAGATCAGGTACAGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FSSFNNFSSLLL*GSGLIRSGTER Trigger: TCTTTCTGTACCTGATCTAATCAGACCACTCCCCCAAAGCAAAAGGGAGGAGAAATTGTTGAATGATGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATTGTGGTCTAGTTACCTaGGAAGGCTTAGCAAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNCGLVT*EGLAKT Trigger: GGTCTTTGCTAAGCCTTCCAAGGTAACTAGACCACA...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATAGATTCATGCGCAACTaGGGTGTTTTGCTCCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNRFMRN*GVLLLL Trigger: CAACAGGAGCAAAACACCCAAGTTGCGCATGAATCT...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTCTTCAGTTCAACTAAGAATCTCAAGCCTCTAATCACTCAACCTCCTCCTTATTTTGGGACCAACTaGAAAACAACCAGAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EVFSSTKNLKPLITQPPPYFGTN*KTTRKK Trigger: CTTCTTTCTGGTTGTTTTCAAGTTGGTCCCAAAATA...AGGAGGAGGTTGAGTGATTAGAGGCTTGAGATTCTTAGTTGAACTGAAGACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATTTGGTGGACCAGAGTTaGGTTGAATTAAATCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNLVDQS*VELNPV Trigger: AACTGGATTTAATTCAACCAAACTCTGGTCCACCAA...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR CAA 72 bp | CCACTCCTGTCAGTAGTGAGCAAGTCTGACCTGTGTTaGGCAAAGGGATTCGTTTACAGAGAGAAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLSVVSKSDLC*AKGFVYREKPR Trigger: CCTGGGTTTCTCTCTGTAAACGAATCCCTTTGCCAAACACAGGTCAGACTTGCTCACTACTGACAGGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTTTCCCAATTATCTCCTaGATCTTCTCTCTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSFPIIS*IFSLLI Trigger: AATGAGAAGAGAGAAGATCCAGGAGATAATTGGGAA...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR CAA 72 bp | GTGTCACGCTGGAGTGAAGCATACTTTAAGGGAAGTTaGTGGCTCAAGGTGTTAACGTTTCTGGTGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSRWSEAYFKGS*WLKVLTFLVPK Trigger: TTTGGGCACCAGAAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| CDS-3UTR CCA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTACTGTATATTTCTGGTaGTCCTTGTGGCGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFTVYFW*SLWRFP Trigger: AGGAAAACGCCACAAGGACCACCAGAAATATACAGT...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTACAGTATGCCATTAAACAAACCTCATCATGTTTCTGTTCACGTCTTATCTTCTTGTCCCTCTTaGCGAAGAAGTTGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQYSMPLNKPHHVSVHVLSSCPS*RRSCPG Trigger: GCCTGGACAACTTCTTCGCCAAGAGGGACAAGAAGA...TAAGACGTGAACAGAAACATGATGAGGTTTGTTTAATGGCATACTGTACTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 |
||
| CDS-3UTR CCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATTCTTCTTGTCCCTCTTaGCGAAGAAGTTGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNSSCPS*RRSCPG Trigger: GCCTGGACAACTTCTTCGCCAAGAGGGACAAGAAGA...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 |
||
| CDS-3UTR CCA 90 bp | ATGTCCCTAATAAGATGTAGATGTGCCATATGTGGTCATTTAACTTCAGGTAGTTCTTCTTGTCCCTCTTaGCGAAGAAGTTGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MSLIRCRCAICGHLTSGSSSCPS*RRSCPG Trigger: GCCTGGACAACTTCTTCGCCAAGAGGGACAAGAAGA...ACTACCTGAAGTTAAATGACCACATATGGCACATCTACATCTTATTAGGGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000189896.2 |
||
| 3UTR CAA 72 bp | GTAATGTTCTCATCATTCAACAATTTCTCCTCCCTTTaGCTTTGGGGGAGTGGTCTGATTAGATCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VMFSSFNNFSSL*LWGSGLIRSGT Trigger: TGTACCTGATCTAATCAGACCACTCCCCCAAAGCAAAAGGGAGGAGAAATTGTTGAATGATGAGAACATTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTTCAGTTCAACTAAGAATCTCAAGCCTCTAATCACTCAACCTCCTCCTTTCCCAATTATCTCCTaGATCTTCTCTCTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: EVFSSTKNLKPLITQPPPFPIIS*IFSLLI Trigger: AATGAGAAGAGAGAAGATCCAGGAGATAATTGGGAA...AGGAGGAGGTTGAGTGATTAGAGGCTTGAGATTCTTAGTTGAACTGAAGACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| CDS-3UTR CCA 90 bp | TTCAGACAATATGCCCTTAAAGAACTTACTCTGAGTCAAAGCAAGGCCTTAATGACTGTATATTTCTGGTaGTCCTTGTGGCGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FRQYALKELTLSQSKALMTVYFW*SLWRFP Trigger: AGGAAAACGCCACAAGGACCACCAGAAATATACAGT...CATTAAGGCCTTGCTTTGACTCAGAGTAAGTTCTTTAAGGGCATATTGTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR CAA 72 bp | GGGATTCGTTTACAGAGAGAAACCCAGGCACTAGTATaGTATCACATAGTCATATGCCAACATAGAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GIRLQRETQALV*YHIVICQHRVC Trigger: ACATACTCTATGTTGGCATATGACTATGTGATACAATACTAGTGCCTGGGTTTCTCTCTGTAAACGAATCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| 3UTR CAA 72 bp | TCCGAGGTCCCATCTTCTGCATATTTTGGGACCAACTaGAAAACAACCAGAAAGAAGCTGTATAATGACATT | + |
|
Preference number: 4 (lower is better) Translates to: SEVPSSAYFGTN*KTTRKKLYNDI Trigger: AATGTCATTATACAGCTTCTTTCTGGTTGTTTTCAAGTTGGTCCCAAAATATGCAGAAGATGGGACCTCGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 |
||
| CDS-3UTR CCA 90 bp | TTCATGTCCCTAATAAGATGTAGATGTGCCATATGTGGTCATTTAACTTCAGGTACTGTATATTTCTGGTaGTCCTTGTGGCGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FMSLIRCRCAICGHLTSGTVYFW*SLWRFP Trigger: AGGAAAACGCCACAAGGACCACCAGAAATATACAGT...ACCTGAAGTTAAATGACCACATATGGCACATCTACATCTTATTAGGGACATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000189875.8 ENSMUST00000189896.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCCCTAATAAGATGTAGATGTGCCATATGTGGTCATTTAACTTCAGGTAGTACTGTATATTTCTGGTaGTCCTTGTGGCGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MSLIRCRCAICGHLTSGSTVYFW*SLWRFP Trigger: AGGAAAACGCCACAAGGACCACCAGAAATATACAGT...ACTACCTGAAGTTAAATGACCACATATGGCACATCTACATCTTATTAGGGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000189875.8 ENSMUST00000189896.2 |
||
| CDS-3UTR CCA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATACTGTATATTTCTGGTaGTCCTTGTGGCGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNTVYFW*SLWRFP Trigger: AGGAAAACGCCACAAGGACCACCAGAAATATACAGT...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| CDS GCA 90 bp | CCGCGCTGCTCCCGCCCGCGCCGCTCGCCGCGTTGGCCGCGCGACTaGTCCGTTCCTTCTTCTTCTTCTTGTCCCTCTTGGCGAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PRCSRPRRSPRWPRD*SVPSSSSCPSWRRS Trigger: ACTTCTTCGCCAAGAGGGACAAGAAGAAGAAGAAGGAACGGAGCAGTCGCGCGGCCAACGCGGCGAGCGGCGCGGGCGGGAGCAGCGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000189896.2 |
||
| CDS CCA 90 bp | CCTCTCTTTGCTCAAATTCTTTCCACTCATTTTCATCCTTCGTTATaGCCTTGCCGGCGGGGCCCGCGCTCCCGCCGTCTCCGGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PLFAQILSTHFHPSL*PCRRGPRSRRLRTS Trigger: CGAGGTCCGGAGACGGCGGGAGCGCGGGCCCCGCCGGCAAGGCCATAACGAAGGATGAAAATGAGTGGAAAGAATTTGAGCAAAGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000189875.8 ENSMUST00000189896.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTTGGAGCAGGAGGCGCTaGTACCGGAGCGGTTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSWSRRR*YRSGFI Trigger: AATAAAACCGCTCCGGTACAAGCGCCTCCTGCTCCA...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| CDS-3UTR CAA 90 bp | CTGTCCACAGCAGTGAGCAGACGCCACACTCTGTCCACAGCAGTTCAATTAGACTGGAGCAGGAGGCGCTaGTACCGGAGCGGTTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LSTAVSRRHTLSTAVQLDWSRRR*YRSGFI Trigger: AATAAAACCGCTCCGGTACAAGCGCCTCCTGCTCCA...GTCTAATTGAACTGCTGTGGACAGAGTGTGGCGTCTGCTCACTGCTGTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| CDS-3UTR CAA 90 bp | CCTGGAGTGCAGCGGATCCGCTGTCCTTTATATGCATCAAAGGCTATCTGGTTCCTTGTGGCGTTTTCCTaGTTGTGGTTAGCCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGVQRIRCPLYASKAIWFLVAFS*LWLALP Trigger: GGGCAAGGCTAACCACAACAAGGAAAACGCCACAAG...GAACCAGATAGCCTTTGATGCATATAAAGGACAGCGGATCCGCTGCACTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| CDS-3UTR CAA 90 bp | GTTTGTGTGTCACGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGTGGAGCAGGAGGCGCTaGTACCGGAGCGGTTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: VCVSRWSEAYFKGSLWLKWSRRR*YRSGFI Trigger: AATAAAACCGCTCCGGTACAAGCGCCTCCTGCTCCA...CTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGTGAAACCCTCTCCTCCTGAGCAGACGTCACACTCTGTCCACAGCAGTTTTCACTTATTTGCATaGCCTGAACTCTTAATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSVKPSPPEQTSHSVHSSFHLFA*PELLIR Trigger: GCGGATTAAGAGTTCAGGCAATGCAAATAAGTGAAA...ACTGCTGTGGACAGAGTGTGACGTCTGCTCAGGAGGAGAGGGTTTCACTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 |
||
| CDS-3UTR CAA 90 bp | GTTTGTGTGTCACGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGCTTGTGGCGTTTTCCTaGTTGTGGTTAGCCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVSRWSEAYFKGSLWLKLVAFS*LWLALP Trigger: GGGCAAGGCTAACCACAACAAGGAAAACGCCACAAG...CTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCGTGACACACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
||
| CDS-3UTR CAA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTTTCTTCTTGTCCCTCTaGGCGAAGAAGTTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFFFLSL*AKKLSR Trigger: CCTGGACAACTTCTTCGCCAAGAGGGACAAGAAGAA...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 |
||
| CDS-3UTR CAA 90 bp | GAAGTCTTCAGTTCAACTAAGAATCTCAAGCCTCTAATCACTCAACCTCCTCCTCTTGTGGCGTTTTCCTaGTTGTGGTTAGCCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVFSSTKNLKPLITQPPPLVAFS*LWLALP Trigger: GGGCAAGGCTAACCACAACAAGGAAAACGCCACAAG...AGGAGGAGGTTGAGTGATTAGAGGCTTGAGATTCTTAGTTGAACTGAAGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| CDS-3UTR CAA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTTCCTTCTTCTTCTTCTaGTCCCTCTTGGCGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFSFFFF*SLLAKK Trigger: CTTCTTCGCCAAGAGGGACAAGAAGAAGAAGAAGGA...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 |
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| CDS-3UTR CAA 90 bp | TTCAGACAATATGCCCTTAAAGAACTTACTCTGAGTCAAAGCAAGGCCTTAATGTGGAGCAGGAGGCGCTaGTACCGGAGCGGTTTTATT | + |
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Preference number: 5 (lower is better) Translates to: FRQYALKELTLSQSKALMWSRRR*YRSGFI Trigger: AATAAAACCGCTCCGGTACAAGCGCCTCCTGCTCCA...CATTAAGGCCTTGCTTTGACTCAGAGTAAGTTCTTTAAGGGCATATTGTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000190226.7 |
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| CDS-3UTR CAA 90 bp | ATGTCCCTAATAAGATGTAGATGTGCCATATGTGGTCATTTAACTTCAGGTAGTTGGAGCAGGAGGCGCTaGTACCGGAGCGGTTTTATT | + |
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Preference number: 5 (lower is better) Translates to: MSLIRCRCAICGHLTSGSWSRRR*YRSGFI Trigger: AATAAAACCGCTCCGGTACAAGCGCCTCCTGCTCCA...ACTACCTGAAGTTAAATGACCACATATGGCACATCTACATCTTATTAGGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000189875.8 ENSMUST00000189896.2 |
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| CDS-3UTR CAA 90 bp | ATGTCCCTAATAAGATGTAGATGTGCCATATGTGGTCATTTAACTTCAGGTAGTCTTGTGGCGTTTTCCTaGTTGTGGTTAGCCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: MSLIRCRCAICGHLTSGSLVAFS*LWLALP Trigger: GGGCAAGGCTAACCACAACAAGGAAAACGCCACAAG...ACTACCTGAAGTTAAATGACCACATATGGCACATCTACATCTTATTAGGGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072249.13 ENSMUST00000116517.9 ENSMUST00000189875.8 ENSMUST00000189896.2 |
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| CDS-3UTR CAA 90 bp | TATCTGGTTCCACCTAAGGATTGGCAAATTCATAGGGCATTTTACAATTCCAATTTCTTCTTGTCCCTCTaGGCGAAGAAGTTGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: YLVPPKDWQIHRAFYNSNFFLSL*AKKLSR Trigger: CCTGGACAACTTCTTCGCCAAGAGGGACAAGAAGAA...ATTGGAATTGTAAAATGCCCTATGAATTTGCCAATCCTTAGGTGGAACCAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 |
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| CDS-3UTR CAA 90 bp | ATGTCCCTAATAAGATGTAGATGTGCCATATGTGGTCATTTAACTTCAGGTAGTTTCTTCTTGTCCCTCTaGGCGAAGAAGTTGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: MSLIRCRCAICGHLTSGSFFLSL*AKKLSR Trigger: CCTGGACAACTTCTTCGCCAAGAGGGACAAGAAGAA...ACTACCTGAAGTTAAATGACCACATATGGCACATCTACATCTTATTAGGGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072249.13 ENSMUST00000189896.2 |
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| CDS-3UTR CAA 90 bp | TTCAGACAATATGCCCTTAAAGAACTTACTCTGAGTCAAAGCAAGGCCTTAATGTCCTTCTTCTTCTTCTaGTCCCTCTTGGCGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: FRQYALKELTLSQSKALMSFFFF*SLLAKK Trigger: CTTCTTCGCCAAGAGGGACAAGAAGAAGAAGAAGGA...CATTAAGGCCTTGCTTTGACTCAGAGTAAGTTCTTTAAGGGCATATTGTCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 |
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| CDS-3UTR CAA 90 bp | CGCTGGAGTGAAGCATACTTTAAGGGAAGTTTGTGGCTCAAGGTGTTAACGTTTGTAATCAACCTCTCTTaGCTCAAATTCTTTCCACTC | + |
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Preference number: 5 (lower is better) Translates to: RWSEAYFKGSLWLKVLTFVINLS*LKFFPL Trigger: GAGTGGAAAGAATTTGAGCAAAGAGAGGTTGATTAC...AAACGTTAACACCTTGAGCCACAAACTTCCCTTAAAGTATGCTTCACTCCAGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 |
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| CDS-3UTR CAA 90 bp | TGCCCTAAATCCACTAAACATGCTCTCAAGCTGGGAAAACATCCATTTCCTGTTGTAATCAACCTCTCTTaGCTCAAATTCTTTCCACTC | + |
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Preference number: 5 (lower is better) Translates to: CPKSTKHALKLGKHPFPVVINLS*LKFFPL Trigger: GAGTGGAAAGAATTTGAGCAAAGAGAGGTTGATTAC...AACAGGAAATGGATGTTTTCCCAGCTTGAGAGCATGTTTAGTGGATTTAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 |
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| CDS-3UTR CAA 90 bp | ATGTCCCTAATAAGATGTAGATGTGCCATATGTGGTCATTTAACTTCAGGTAGTGTAATCAACCTCTCTTaGCTCAAATTCTTTCCACTC | + |
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Preference number: 5 (lower is better) Translates to: MSLIRCRCAICGHLTSGSVINLS*LKFFPL Trigger: GAGTGGAAAGAATTTGAGCAAAGAGAGGTTGATTAC...ACTACCTGAAGTTAAATGACCACATATGGCACATCTACATCTTATTAGGGACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072249.13 ENSMUST00000189875.8 ENSMUST00000189896.2 |
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| CDS-3UTR CAA 90 bp | TTCATGTCCCTAATAAGATGTAGATGTGCCATATGTGGTCATTTAACTTCAGGTGTAATCAACCTCTCTTaGCTCAAATTCTTTCCACTC | + |
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Preference number: 5 (lower is better) Translates to: FMSLIRCRCAICGHLTSGVINLS*LKFFPL Trigger: GAGTGGAAAGAATTTGAGCAAAGAGAGGTTGATTAC...ACCTGAAGTTAAATGACCACATATGGCACATCTACATCTTATTAGGGACATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072249.13 ENSMUST00000189875.8 ENSMUST00000189896.2 |
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| CDS-3UTR CAA 90 bp | TTCCAGTACAGTATGCCATTAAACAAACCTCATCATGTTTCTGTTCACGTCTTATTTCACTTATTTGCATaGCCTGAACTCTTAATCCGC | + |
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Preference number: 5 (lower is better) Translates to: FQYSMPLNKPHHVSVHVLFHLFA*PELLIR Trigger: GCGGATTAAGAGTTCAGGCAATGCAAATAAGTGAAA...TAAGACGTGAACAGAAACATGATGAGGTTTGTTTAATGGCATACTGTACTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 |
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| CDS-3UTR CAA 90 bp | TTCATGTCCCTAATAAGATGTAGATGTGCCATATGTGGTCATTTAACTTCAGGTTTTCACTTATTTGCATaGCCTGAACTCTTAATCCGC | + |
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Preference number: 5 (lower is better) Translates to: FMSLIRCRCAICGHLTSGFHLFA*PELLIR Trigger: GCGGATTAAGAGTTCAGGCAATGCAAATAAGTGAAA...ACCTGAAGTTAAATGACCACATATGGCACATCTACATCTTATTAGGGACATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072249.13 ENSMUST00000189875.8 ENSMUST00000189896.2 |
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| CDS CAA 72 bp | GCCGCCGCGCTGCTCCCGCCCGCGCCGCTCGCCGCGTaGGCCGCGCGACTGCTCCGTTCCTTCTTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AAALLPPAPLAA*AARLLRSFFFF Trigger: GAAGAAGAAGAAGGAACGGAGCAGTCGCGCGGCCAACGCGGCGAGCGGCGCGGGCGGGAGCAGCGCGGCGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000189896.2 |
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| CDS CCA 72 bp | CCGCCGCGCTGCTCCCGCCCGCGCCGCTCGCCGCGTTaGCCGCGCGACTGCTCCGTTCCTTCTTCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PPRCSRPRRSPR*PRDCSVPSSSS Trigger: AGAAGAAGAAGAAGGAACGGAGCAGTCGCGCGGCCAACGCGGCGAGCGGCGCGGGCGGGAGCAGCGCGGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000189896.2 |
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| CDS GCA 72 bp | TCCCGCCCGCGCCGCTCGCCGCGTTGGCCGCGCGACTaGTCCGTTCCTTCTTCTTCTTCTTGTCCCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SRPRRSPRWPRD*SVPSSSSCPSW Trigger: CCAAGAGGGACAAGAAGAAGAAGAAGGAACGGAGCAGTCGCGCGGCCAACGCGGCGAGCGGCGCGGGCGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000189896.2 |
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| CDS GCA 72 bp | ATTCTTTCCACTCATTTTCATCCTTCGTTATGGCCTTaGCGGCGGGGCCCGCGCTCCCGCCGTCTCCGGACC | + |
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Preference number: 6 (lower is better) Translates to: ILSTHFHPSLWP*RRGPRSRRLRT Trigger: GGTCCGGAGACGGCGGGAGCGCGGGCCCCGCCGGCAAGGCCATAACGAAGGATGAAAATGAGTGGAAAGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035484.11 ENSMUST00000072249.13 ENSMUST00000189875.8 ENSMUST00000189896.2 |
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