Pregenerated sensors for CDT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006585Ensembl transcript IDs: ENSMUST00000006760.3
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTTAAGTCTCATGGGGAAGCAAGGCTATGCCAGCCTAGGCTTCCACCTGGACCTGAGCTGAGTCTGGGATaGCCCAAAGCCTCAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LKSHGEARLCQPRLPPGPELSLG*PKASGS Trigger: GCTTCCTGAGGCTTTGGGGCATCCCAGACTCAGCTC...AGGTCCAGGTGGAAGCCTAGGCTGGCATAGCCTTGCTTCCCCATGAGACTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| 3UTR-3UTR TCA 90 bp | CACATATTTACAGAAGGCCCAATTTCACTCTCAGAGCAGCGTCCCGTGAAATCACTTCCACCTGGACCTTaGTCTTGGGTCTTGACCATA | + |
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Preference number: 2 (lower is better) Translates to: HIFTEGPISLSEQRPVKSLPPGP*SWVLTI Trigger: TATGGTCAAGACCCAAGATCAAGGTCCAGGTGGAAG...TGATTTCACGGGACGCTGCTCTGAGAGTGAAATTGGGCCTTCTGTAAATATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| 3UTR-3UTR TCA 90 bp | ATAAGGTTTGAAAAGAAACCACACTTCACATATTTACAGAAGGCCCAATTTCACAATGCCAGCACTTTATaGGATCCATGGGCAACGATA | + |
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Preference number: 2 (lower is better) Translates to: IRFEKKPHFTYLQKAQFHNASTL*DPWATI Trigger: TATCGTTGCCCATGGATCTCATAAAGTGCTGGCATT...GTGAAATTGGGCCTTCTGTAAATATGTGAAGTGTGGTTTCTTTTCAAACCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| 3UTR GCA 72 bp | CTTCAGAGTCTACTTCCCCTAGAGCTGAGTCTGGGATaGCCCAAAGCCTCAGGAAGCAACTTAATGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LQSLLPLELSLG*PKASGSNLMPA Trigger: TGCTGGCATTAAGTTGCTTCCTGAGGCTTTGGGGCATCCCAGACTCAGCTCTAGGGGAAGTAGACTCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| 3UTR TCA 72 bp | CAAAGCCTCAGGAAGCAACTTAATGCCAGCACTTTATaGGATCCATGGGCAACGATAGCTGCCCACACTGGC | + |
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Preference number: 3 (lower is better) Translates to: QSLRKQLNASTL*DPWATIAAHTG Trigger: GCCAGTGTGGGCAGCTATCGTTGCCCATGGATCTCATAAAGTGCTGGCATTAAGTTGCTTCCTGAGGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| 3UTR-3UTR CAA 90 bp | CACATATTTACAGAAGGCCCAATTTCACTCTCAGAGCAGCGTCCCGTGAAATCAGCTTCCACCTGGACCTaGATCTTGGGTCTTGACCAT | + |
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Preference number: 3 (lower is better) Translates to: HIFTEGPISLSEQRPVKSASTWT*ILGLDH Trigger: ATGGTCAAGACCCAAGATCAAGGTCCAGGTGGAAGC...TGATTTCACGGGACGCTGCTCTGAGAGTGAAATTGGGCCTTCTGTAAATATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CACTTTATGAGATCCATGGGCAACGATAGCTGCCCACACTGGCGAGGCTTAAAGAGCAGGTGGGGTGGCTaGCGGAGTGGCCGGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: HFMRSMGNDSCPHWRGLKSRWGG*RSGREW Trigger: CCACTCCCGGCCACTCCGCCAGCCACCCCACCTGCT...CTTTAAGCCTCGCCAGTGTGGGCAGCTATCGTTGCCCATGGATCTCATAAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CCAACATACCCTACTCTTCAGAGTCTACTTCCCCTAGAGCTGAGTCTGGGATGCGCACCGCCAGCCTCCTaGCCCAGCAAGGGCTCGATG | + |
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Preference number: 4 (lower is better) Translates to: PTYPTLQSLLPLELSLGCAPPAS*PSKGSM Trigger: CATCGAGCCCTTGCTGGGCCAGGAGGCTGGCGGTGC...GCATCCCAGACTCAGCTCTAGGGGAAGTAGACTCTGAAGAGTAGGGTATGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR TCA 90 bp | TTCTTAAGTCTCATGGGGAAGCAAGGCTATGCCAGCCTAGGCTTCCACCTGGACGGATGCGATGCAGGCTaGGCCAGTCCGGCAGCAACT | + |
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Preference number: 4 (lower is better) Translates to: FLSLMGKQGYASLGFHLDGCDAG*ASPAAT Trigger: AGTTGCTGCCGGACTGGCTCAGCCTGCATCGCATCC...GTCCAGGTGGAAGCCTAGGCTGGCATAGCCTTGCTTCCCCATGAGACTTAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR TCA 90 bp | AGAAGGCCCAATTTCACTCTCAGAGCAGCGTCCCGTGAAATCAGGAAAGTCCAAGGGCCAGCCTCGCAGTaGGGCCAGCCAGGTCAACAG | + |
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Preference number: 4 (lower is better) Translates to: RRPNFTLRAASREIRKVQGPASQ*GQPGQQ Trigger: CTGTTGACCTGGCTGGCCTCACTGCGAGGCTGGCCC...TTGGACTTTCCTGATTTCACGGGACGCTGCTCTGAGAGTGAAATTGGGCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR TCA 90 bp | TCCAAGGTCTGTGTGATTCTTAAGTCTCATGGGGAAGCAAGGCTATGCCAGCCTCCTGGGAGACCAGGCTaGGCCAGAGCATGGAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: SKVCVILKSHGEARLCQPPGRPG*ARAWKR Trigger: GCGCTTCCATGCTCTGGCTCAGCCTGGTCTCCCAGG...AGGCTGGCATAGCCTTGCTTCCCCATGAGACTTAAGAATCACACAGACCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR TCA 90 bp | CCTAGAGCTGAGTCTGGGATGCCCCAAAGCCTCAGGAAGCAACTTAATGCCAGCCAGCCTTGTCCAGCTTaGCGTAGGTATCCGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: PRAESGMPQSLRKQLNASQPCPA*RRYPCG Trigger: TCCGCACGGATACCTACGTCAAGCTGGACAAGGCTG...GCTGGCATTAAGTTGCTTCCTGAGGCTTTGGGGCATCCCAGACTCAGCTCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CACATATTTACAGAAGGCCCAATTTCACTCTCAGAGCAGCGTCCCGTGAAATCACGGAGAGGCAGCAGGTaGGGTGGCTGGCGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: HIFTEGPISLSEQRPVKSRRGSR*GGWRSG Trigger: GCCACTCCGCCAGCCACCCCACCTGCTGCCTCTCCG...TGATTTCACGGGACGCTGCTCTGAGAGTGAAATTGGGCCTTCTGTAAATATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | CCAACATACCCTACTCTTCAGAGTCTACTTCCCCTAGAGCTGAGTCTGGGATGCACATTGAAGCGCGGATaGCAGCGGGTCAGCTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: PTYPTLQSLLPLELSLGCTLKRG*QRVSWS Trigger: CGACCAGCTGACCCGCTGGCATCCGCGCTTCAATGT...GCATCCCAGACTCAGCTCTAGGGGAAGTAGACTCTGAAGAGTAGGGTATGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | CCAACATACCCTACTCTTCAGAGTCTACTTCCCCTAGAGCTGAGTCTGGGATGCAGCGCAGGGCCAGGTTaGTCAGGGCCTTCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: PTYPTLQSLLPLELSLGCSAGPG*SGPSPS Trigger: AGATGGAGAAGGCCCTGAGCAACCTGGCCCTGCGCT...GCATCCCAGACTCAGCTCTAGGGGAAGTAGACTCTGAAGAGTAGGGTATGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | CCTAGAGCTGAGTCTGGGATGCCCCAAAGCCTCAGGAAGCAACTTAATGCCAGCGTCCGGCAGCAACTCTaGCAGGAGCACCAGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: PRAESGMPQSLRKQLNASVRQQL*QEHQMF Trigger: AAACATCTGGTGCTCCTGGCAGAGTTGCTGCCGGAC...GCTGGCATTAAGTTGCTTCCTGAGGCTTTGGGGCATCCCAGACTCAGCTCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | ACCACACTTCACATATTTACAGAAGGCCCAATTTCACTCTCAGAGCAGCGTCCCTCCGTGCGGATGCGATaGAGGCTGAGCCAGTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: TTLHIFTEGPISLSEQRPSVRMR*RLSQSG Trigger: GCCGGACTGGCTCAGCCTGCATCGCATCCGCACGGA...GGGACGCTGCTCTGAGAGTGAAATTGGGCCTTCTGTAAATATGTGAAGTGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CCCAAAGCCTCAGGAAGCAACTTAATGCCAGCACTTTATGAGATCCATGGGCAAGGTCAGCTGGAGGGCTaGGCTCAGCTGGGGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: PKASGSNLMPALYEIHGQGQLEG*AQLGNW Trigger: CCAGTTCCCCAGCTGAGCCCAGCCCTCCAGCTGACC...TTGCCCATGGATCTCATAAAGTGCTGGCATTAAGTTGCTTCCTGAGGCTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CACATATTTACAGAAGGCCCAATTTCACTCTCAGAGCAGCGTCCCGTGAAATCATGCCAGCGGGTCAGCTaGTCGTCCGGCACCGCCATG | + |
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Preference number: 4 (lower is better) Translates to: HIFTEGPISLSEQRPVKSCQRVS*SSGTAM Trigger: CATGGCGGTGCCGGACGACCAGCTGACCCGCTGGCA...TGATTTCACGGGACGCTGCTCTGAGAGTGAAATTGGGCCTTCTGTAAATATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | TCCAAGGTCTGTGTGATTCTTAAGTCTCATGGGGAAGCAAGGCTATGCCAGCCTAGTGGCCGGGAGTGGTaGAGTAGAGGTCCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SKVCVILKSHGEARLCQPSGREW*SRGPRA Trigger: AGCCCTGGGACCTCTACTCCACCACTCCCGGCCACT...AGGCTGGCATAGCCTTGCTTCCCCATGAGACTTAAGAATCACACAGACCTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | ACCACACTTCACATATTTACAGAAGGCCCAATTTCACTCTCAGAGCAGCGTCCCCGGAGTGGCCGGGAGTaGTGGAGTAGAGGTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TTLHIFTEGPISLSEQRPRSGRE*WSRGPR Trigger: CCTGGGACCTCTACTCCACCACTCCCGGCCACTCCG...GGGACGCTGCTCTGAGAGTGAAATTGGGCCTTCTGTAAATATGTGAAGTGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CACTTTATGAGATCCATGGGCAACGATAGCTGCCCACACTGGCGAGGCTTAAAGGGGCCTTCTCCATCTTaGGTGTCATCAAGCTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: HFMRSMGNDSCPHWRGLKGPSPS*VSSSSG Trigger: CCCGGAGCTTGATGACACCCAAGATGGAGAAGGCCC...CTTTAAGCCTCGCCAGTGTGGGCAGCTATCGTTGCCCATGGATCTCATAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CAGCACTTTATGAGATCCATGGGCAACGATAGCTGCCCACACTGGCGAGGCTTACTTGCCAGCTGCTTCTaGACCTCCTTGGCCCTTATC | + |
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Preference number: 4 (lower is better) Translates to: QHFMRSMGNDSCPHWRGLLASCF*TSLALI Trigger: GATAAGGGCCAAGGAGGTCCAGAAGCAGCTGGCAAG...TAAGCCTCGCCAGTGTGGGCAGCTATCGTTGCCCATGGATCTCATAAAGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR TCA 90 bp | AAAACTAGCAGTCACATGCAGGGCCATATAAGGTTTGAAAAGAAACCACACTTCGGCTGCTGCTCCGGGTaGACGCAGGAGCCACGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KTSSHMQGHIRFEKKPHFGCCSG*TQEPRG Trigger: GCCTCGTGGCTCCTGCGTTCACCCGGAGCAGCAGCC...GAAGTGTGGTTTCTTTTCAAACCTTATATGGCCCTGCATGTGACTGCTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | TTGTGCAATGGCCATCCAACATACCCTACTCTTCAGAGTCTACTTCCCCTAGAGCACATGGTTGCTCTGTaGGCACCTTGGCATCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LCNGHPTYPTLQSLLPLEHMVAL*APWHLG Trigger: CCCCAGATGCCAAGGTGCCCACAGAGCAACCATGTG...CTCTAGGGGAAGTAGACTCTGAAGAGTAGGGTATGTTGGATGGCCATTGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CCAACATACCCTACTCTTCAGAGTCTACTTCCCCTAGAGCTGAGTCTGGGATGCGGAGCATGCTCACAATaGTGTCCATGCTGCGGAACA | + |
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Preference number: 4 (lower is better) Translates to: PTYPTLQSLLPLELSLGCGACSQ*CPCCGT Trigger: TGTTCCGCAGCATGGACACCATTGTGAGCATGCTCC...GCATCCCAGACTCAGCTCTAGGGGAAGTAGACTCTGAAGAGTAGGGTATGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CACATATTTACAGAAGGCCCAATTTCACTCTCAGAGCAGCGTCCCGTGAAATCACGGGCCAGCACTTCCTaGGCAGTGGTGAGCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HIFTEGPISLSEQRPVKSRASTS*AVVSFS Trigger: AGAGAAGCTCACCACTGCCCAGGAAGTGCTGGCCCG...TGATTTCACGGGACGCTGCTCTGAGAGTGAAATTGGGCCTTCTGTAAATATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | CAGCACTTTATGAGATCCATGGGCAACGATAGCTGCCCACACTGGCGAGGCTTACAATGGTGTCCATGCTaGGGAACATCTCAACTAGCA | + |
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Preference number: 4 (lower is better) Translates to: QHFMRSMGNDSCPHWRGLQWCPC*GTSQLA Trigger: TGCTAGTTGAGATGTTCCGCAGCATGGACACCATTG...TAAGCCTCGCCAGTGTGGGCAGCTATCGTTGCCCATGGATCTCATAAAGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | CACTTTATGAGATCCATGGGCAACGATAGCTGCCCACACTGGCGAGGCTTAAAGACTGTCCACCATCCTTaGACAGACCACCTCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: HFMRSMGNDSCPHWRGLKTVHHP*TDHLHS Trigger: ACTATGGAGGTGGTCTGTGCAAGGATGGTGGACAGT...CTTTAAGCCTCGCCAGTGTGGGCAGCTATCGTTGCCCATGGATCTCATAAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CCAACATACCCTACTCTTCAGAGTCTACTTCCCCTAGAGCTGAGTCTGGGATGCAGCTTTCTCGACACATaGTTGCTCTGTGGGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: PTYPTLQSLLPLELSLGCSFLDT*LLCGHL Trigger: AAGGTGCCCACAGAGCAACCATGTGTCGAGAAAGCT...GCATCCCAGACTCAGCTCTAGGGGAAGTAGACTCTGAAGAGTAGGGTATGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | AGAGCTGAGTCTGGGATGCCCCAAAGCCTCAGGAAGCAACTTAATGCCAGCACTTACACGGTTTTGATCTaGCCCACATTGCGCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RAESGMPQSLRKQLNASTYTVLI*PTLRSS Trigger: TGAAGAGCGCAATGTGGGCCAGATCAAAACCGTGTA...AGTGCTGGCATTAAGTTGCTTCCTGAGGCTTTGGGGCATCCCAGACTCAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | CCAACATACCCTACTCTTCAGAGTCTACTTCCCCTAGAGCTGAGTCTGGGATGCTTTCTCCATCTCCCCTaGACTCAGAGCAGTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PTYPTLQSLLPLELSLGCFLHLP*TQSSLA Trigger: TGCCAAACTGCTCTGAGTCCAGGGGAGATGGAGAAA...GCATCCCAGACTCAGCTCTAGGGGAAGTAGACTCTGAAGAGTAGGGTATGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | TTTGAAAAGAAACCACACTTCACATATTTACAGAAGGCCCAATTTCACTCTCAGGGCTCTCAGGGCCCGTaGCTGGGCTCCCAACTTCCG | + |
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Preference number: 4 (lower is better) Translates to: FEKKPHFTYLQKAQFHSQGSQGP*LGSQLP Trigger: CGGAAGTTGGGAGCCCAGGCACGGGCCCTGAGAGCC...CTGAGAGTGAAATTGGGCCTTCTGTAAATATGTGAAGTGTGGTTTCTTTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | AGAAGGCCCAATTTCACTCTCAGAGCAGCGTCCCGTGAAATCAGGAAAGTCCAAAGCGATTGTGGAGCATaGTCACAATGGTGTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: RRPNFTLRAASREIRKVQSDCGA*SQWCPC Trigger: GCATGGACACCATTGTGAGCATGCTCCACAATCGCT...TTGGACTTTCCTGATTTCACGGGACGCTGCTCTGAGAGTGAAATTGGGCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | CCAACATACCCTACTCTTCAGAGTCTACTTCCCCTAGAGCTGAGTCTGGGATGCTCACAATGGTGTCCATaGTGCGGAACATCTCAACTA | + |
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Preference number: 4 (lower is better) Translates to: PTYPTLQSLLPLELSLGCSQWCP*CGTSQL Trigger: TAGTTGAGATGTTCCGCAGCATGGACACCATTGTGA...GCATCCCAGACTCAGCTCTAGGGGAAGTAGACTCTGAAGAGTAGGGTATGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | AGTCACATGCAGGGCCATATAAGGTTTGAAAAGAAACCACACTTCACATATTTAAGGGCTGGGCTCAGCTaGGGAACTGGGCTCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SHMQGHIRFEKKPHFTYLRAGLS*GTGLRQ Trigger: CTGCCTGAGCCCAGTTCCCCAGCTGAGCCCAGCCCT...TAAATATGTGAAGTGTGGTTTCTTTTCAAACCTTATATGGCCCTGCATGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | AAAACTAGCAGTCACATGCAGGGCCATATAAGGTTTGAAAAGAAACCACACTTCGCACCGTGTCATCCTTaGCAGCTGCTTCTGGACCTC | + |
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Preference number: 4 (lower is better) Translates to: KTSSHMQGHIRFEKKPHFAPCHP*QLLLDL Trigger: GAGGTCCAGAAGCAGCTGGCAAGGATGACACGGTGC...GAAGTGTGGTTTCTTTTCAAACCTTATATGGCCCTGCATGTGACTGCTAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CCA 90 bp | AAAACTAGCAGTCACATGCAGGGCCATATAAGGTTTGAAAAGAAACCACACTTCGCTCAGGCAGAGAACTaGGGCAGGAGTCCAATCCAG | + |
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Preference number: 4 (lower is better) Translates to: KTSSHMQGHIRFEKKPHFAQAEN*GRSPIQ Trigger: CTGGATTGGACTCCTGCCCCAGTTCTCTGCCTGAGC...GAAGTGTGGTTTCTTTTCAAACCTTATATGGCCCTGCATGTGACTGCTAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | AGTCACATGCAGGGCCATATAAGGTTTGAAAAGAAACCACACTTCACATATTTACAGACACGAAGACATTaGGCAGCACGCGGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SHMQGHIRFEKKPHFTYLQTRRH*AARGPA Trigger: AGCTGGCCCGCGTGCTGCGCAATGTCTTCGTGTCTG...TAAATATGTGAAGTGTGGTTTCTTTTCAAACCTTATATGGCCCTGCATGTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR GCA 90 bp | AAAACTAGCAGTCACATGCAGGGCCATATAAGGTTTGAAAAGAAACCACACTTCGCTCTTCAAAGCGCTTaGGCATCATCTCCTGAACAC | + |
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Preference number: 4 (lower is better) Translates to: KTSSHMQGHIRFEKKPHFALQSA*ASSPEH Trigger: GTGTTCAGGAGATGATGCGCAAGCGCTTTGAAGAGC...GAAGTGTGGTTTCTTTTCAAACCTTATATGGCCCTGCATGTGACTGCTAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR TCA 90 bp | AGTCACATGCAGGGCCATATAAGGTTTGAAAAGAAACCACACTTCACATATTTATGGGATACACGGTTTTaGTCTGGCCCACATTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: SHMQGHIRFEKKPHFTYLWDTRF*SGPHCA Trigger: AGCGCAATGTGGGCCAGATCAAAACCGTGTATCCCA...TAAATATGTGAAGTGTGGTTTCTTTTCAAACCTTATATGGCCCTGCATGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR TCA 90 bp | AGTCACATGCAGGGCCATATAAGGTTTGAAAAGAAACCACACTTCACATATTTAGCAAGGGCTCGATGGTaGGCTGGTAATCAGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: SHMQGHIRFEKKPHFTYLARARW*AGNQIS Trigger: AGAGATCTGATTACCAGCTCACCATCGAGCCCTTGC...TAAATATGTGAAGTGTGGTTTCTTTTCAAACCTTATATGGCCCTGCATGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | CGGAGAGGCAGCAGGTGGGGTGGCTGGCGGAGTGGCCGGGAGTGGTaGAGTAGAGGTCCCAGGGCTACCGGGCTCAGCCGAGCGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: RRGSRWGGWRSGREW*SRGPRATGLSRAQG Trigger: GCCCTGCGCTCGGCTGAGCCCGGTAGCCCTGGGACCTCTACTCCACCACTCCCGGCCACTCCGCCAGCCACCCCACCTGCTGCCTCTCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | GCTCGGAGAGGCAGCAGGTGGGGTGGCTGGCGGAGTGGCCGGGAGTaGTGGAGTAGAGGTCCCAGGGCTACCGGGCTCAGCCGAGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: ARRGSRWGGWRSGRE*WSRGPRATGLSRAQ Trigger: CTGCGCTCGGCTGAGCCCGGTAGCCCTGGGACCTCTACTCCACCACTCCCGGCCACTCCGCCAGCCACCCCACCTGCTGCCTCTCCGAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | GGACACACCCTTCAGGGCGCTCGGAGAGGCAGCAGGTGGGGTGGCTaGCGGAGTGGCCGGGAGTGGTGGAGTAGAGGTCCCAGGGCTACC | + |
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Preference number: 5 (lower is better) Translates to: GHTLQGARRGSRWGG*RSGREWWSRGPRAT Trigger: GGTAGCCCTGGGACCTCTACTCCACCACTCCCGGCCACTCCGCCAGCCACCCCACCTGCTGCCTCTCCGAGCGCCCTGAAGGGTGTGTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | CTGGAGGGCTGGGCTCAGCTGGGGAACTGGGCTCAGGCAGAGAACTaGGGCAGGAGTCCAATCCAGGCAGCCGTAACCTCCGGCGCGCGA | + |
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Preference number: 5 (lower is better) Translates to: LEGWAQLGNWAQAEN*GRSPIQAAVTSGAR Trigger: TCGCGCGCCGGAGGTTACGGCTGCCTGGATTGGACTCCTGCCCCAGTTCTCTGCCTGAGCCCAGTTCCCCAGCTGAGCCCAGCCCTCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | GCCCGTGCCTGGGCTCCCAACTTCCGTGCCCGCCTCAGGCAGGACTaGAGCTCAGAGACGGAGTCCTCTGAGGGGATCTTGCCCGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: ARAWAPNFRARLRQD*SSETESSEGILPGC Trigger: ACAGCCGGGCAAGATCCCCTCAGAGGACTCCGTCTCTGAGCTCCAGTCCTGCCTGAGGCGGGCACGGAAGTTGGGAGCCCAGGCACGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 90 bp | ACATTGCGCAGCACGCGGGCCAGCTCTGGCAGACGCTCTAACCGCTaGAGGCGAAGCTCCTGCTCGGGGCACCGTGTCATCCTTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLRSTRASSGRRSNR*RRSSCSGHRVILAS Trigger: GCTGGCAAGGATGACACGGTGCCCCGAGCAGGAGCTTCGCCTGCAGCGGTTAGAGCGTCTGCCAGAGCTGGCCCGCGTGCTGCGCAATGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | TGGGCAAACGGGGGAGCCAGGGTCAGCTGGAGGGCTAGGGTCAGCTaGAGGGCTGGGCTCAGCTGGGGAACTGGGCTCAGGCAGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: WANGGARVSWRARVS*RAGLSWGTGLRQRT Trigger: AGTTCTCTGCCTGAGCCCAGTTCCCCAGCTGAGCCCAGCCCTCCAGCTGACCCTAGCCCTCCAGCTGACCCTGGCTCCCCCGTTTGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS TCA 90 bp | GCTGGGGCAGTTCAGCTGGCTCAATGTCAGGCACCTCGTCCACATTaGAGCGCGGATGCCAGCGGGTCAGCTGGTCGTCCGGCACCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGAVQLAQCQAPRPH*SADASGSAGRPAPP Trigger: TGGCGGTGCCGGACGACCAGCTGACCCGCTGGCATCCGCGCTTCAATGTGGACGAGGTGCCTGACATTGAGCCAGCTGAACTGCCCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 90 bp | TTGTGCTGTTCCTTGACACGTTCCACCAGGTTCTGCCGGAAGACTTaGCGGCGCTGCAGGAGGCACGTGGCTGTGAGCTGGGTGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: LCCSLTRSTRFCRKT*RRCRRHVAVSWVAP Trigger: CGGTGCCACCCAGCTCACAGCCACGTGCCTCCTGCAGCGCCGGCAAGTCTTCCGGCAGAACCTGGTGGAACGTGTCAAGGAACAGCACAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | AGCTGCTTCTGGACCTCCTTGGCCCTTATCCGCTCTAGCAGTGCTTaGGACACACCCTTCAGGGCGCTCGGAGAGGCAGCAGGTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SCFWTSLALIRSSSA*DTPFRALGEAAGGV Trigger: CACCCCACCTGCTGCCTCTCCGAGCGCCCTGAAGGGTGTGTCCCAAGCACTGCTAGAGCGGATAAGGGCCAAGGAGGTCCAGAAGCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 90 bp | GCCAGGAAGACCTTGTGCTGTTCCTTGACACGTTCCACCAGGTTCTaGCGGAAGACTTGCCGGCGCTGCAGGAGGCACGTGGCTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARKTLCCSLTRSTRF*RKTCRRCRRHVAVS Trigger: GCTCACAGCCACGTGCCTCCTGCAGCGCCGGCAAGTCTTCCGGCAGAACCTGGTGGAACGTGTCAAGGAACAGCACAAGGTCTTCCTGGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | GCTCGGGGCACCGTGTCATCCTTGCCAGCTGCTTCTGGACCTCCTTaGCCCTTATCCGCTCTAGCAGTGCTTGGGACACACCCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARGTVSSLPAASGPP*PLSALAVLGTHPSG Trigger: CCCTGAAGGGTGTGTCCCAAGCACTGCTAGAGCGGATAAGGGCCAAGGAGGTCCAGAAGCAGCTGGCAAGGATGACACGGTGCCCCGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | CGAAGCTCCTGCTCGGGGCACCGTGTCATCCTTGCCAGCTGCTTCTaGACCTCCTTGGCCCTTATCCGCTCTAGCAGTGCTTGGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: RSSCSGHRVILASCF*TSLALIRSSSAWDT Trigger: TGTGTCCCAAGCACTGCTAGAGCGGATAAGGGCCAAGGAGGTCCAGAAGCAGCTGGCAAGGATGACACGGTGCCCCGAGCAGGAGCTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 90 bp | TTGGCAACTGTCCACCATCCTTGCACAGACCACCTCCATAGTGAGTaGCGGCTTCCGCTCAGACACGAAGACATTGCGCAGCACGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: LATVHHPCTDHLHSE*RLPLRHEDIAQHAG Trigger: GCCCGCGTGCTGCGCAATGTCTTCGTGTCTGAGCGGAAGCCGGCACTCACTATGGAGGTGGTCTGTGCAAGGATGGTGGACAGTTGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | GGCAGTGGTGAGCTTCTCTGTGACAGGAGGCTGGGGCAGTTCAGCTaGCTCAATGTCAGGCACCTCGTCCACATTGAAGCGCGGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSGELLCDRRLGQFS*LNVRHLVHIEARMP Trigger: TGGCATCCGCGCTTCAATGTGGACGAGGTGCCTGACATTGAGCCAGCTGAACTGCCCCAGCCTCCTGTCACAGAGAAGCTCACCACTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | AGCCAGAGCATGGAAGCGCTGGTAGGCAGGAGCTTTCTCGACACATaGTTGCTCTGTGGGCACCTTGGCATCTGGGGTACTAGGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQSMEALVGRSFLDT*LLCGHLGIWGTRLH Trigger: GTGGAGCCTAGTACCCCAGATGCCAAGGTGCCCACAGAGCAACCATGTGTCGAGAAAGCTCCTGCCTACCAGCGCTTCCATGCTCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | CCTAGAGCTGAGTCTGGGATGCCCCAAAGCCTCAGGAAGCAACTTAATGCCAGCTCAGACACGAAGACATaGCGCAGCACGCGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRAESGMPQSLRKQLNASSDTKT*RSTRAS Trigger: GCTGGCCCGCGTGCTGCGCAATGTCTTCGTGTCTGA...GCTGGCATTAAGTTGCTTCCTGAGGCTTTGGGGCATCCCAGACTCAGCTCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | TCCCCTAGAGCTGAGTCTGGGATGCCCCAAAGCCTCAGGAAGCAACTTAATGCCCTCCACAGCATTCTCTaGGACTCGGGCTCTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPRAESGMPQSLRKQLNALHSIL*DSGSQG Trigger: GCCCTGAGAGCCCGAGTCCAAGAGAATGCTGTGGAG...GGCATTAAGTTGCTTCCTGAGGCTTTGGGGCATCCCAGACTCAGCTCTAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | TTGACCAACATAAACAGTTGTACTCTTTGTTCGCTTGACGGGGGATaGGCAAACGGGGGAGCCAGGGTCAGCTGGAGGGCTAGGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTNINSCTLCSLDGG*ANGGARVSWRARVS Trigger: GCTGACCCTAGCCCTCCAGCTGACCCTGGCTCCCCCGTTTGCCCATCCCCCGTCAAGCGAACAAAGAGTACAACTGTTTATGTTGGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | TTCTTAAGTCTCATGGGGAAGCAAGGCTATGCCAGCCTAGGCTTCCACCTGGACTGCTCTGTGGGCACCTaGGCATCTGGGGTACTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLSLMGKQGYASLGFHLDCSVGT*ASGVLG Trigger: GCCTAGTACCCCAGATGCCAAGGTGCCCACAGAGCA...GTCCAGGTGGAAGCCTAGGCTGGCATAGCCTTGCTTCCCCATGAGACTTAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS TCA 90 bp | CATTGCACTCCTGGCGGAAGCGATACGACGTGGGATACACGGTTTTaGTCTGGCCCACATTGCGCTCTTCAAAGCGCTTGCGCATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HCTPGGSDTTWDTRF*SGPHCALQSACASS Trigger: AGATGATGCGCAAGCGCTTTGAAGAGCGCAATGTGGGCCAGATCAAAACCGTGTATCCCACGTCGTATCGCTTCCGCCAGGAGTGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | TCAGATCTCTTGATGCTGTCCTTGAAGGTGGGGACATTGCACTCCTaGCGGAAGCGATACGACGTGGGATACACGGTTTTGATCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SDLLMLSLKVGTLHS*RKRYDVGYTVLIWP Trigger: GGGCCAGATCAAAACCGTGTATCCCACGTCGTATCGCTTCCGCCAGGAGTGCAATGTCCCCACCTTCAAGGACAGCATCAAGAGATCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | CACTTTATGAGATCCATGGGCAACGATAGCTGCCCACACTGGCGAGGCTTAAAGTTGAAGGTGGGGACATaGCACTCCTGGCGGAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: HFMRSMGNDSCPHWRGLKLKVGT*HSWRKR Trigger: TCGCTTCCGCCAGGAGTGCAATGTCCCCACCTTCAA...CTTTAAGCCTCGCCAGTGTGGGCAGCTATCGTTGCCCATGGATCTCATAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | AGGAGCACCAGATGTTTCTCCATCTCCCCTGGACTCAGAGCAGTTTaGCAACTGTCCACCATCCTTGCACAGACCACCTCCATAGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSTRCFSISPGLRAV*QLSTILAQTTSIVS Trigger: ACTCACTATGGAGGTGGTCTGTGCAAGGATGGTGGACAGTTGCCAAACTGCTCTGAGTCCAGGGGAGATGGAGAAACATCTGGTGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | AGAGCTGAGTCTGGGATGCCCCAAAGCCTCAGGAAGCAACTTAATGCCAGCACTTTGATCTGGCCCACATaGCGCTCTTCAAAGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RAESGMPQSLRKQLNASTLIWPT*RSSKRL Trigger: CAAGCGCTTTGAAGAGCGCAATGTGGGCCAGATCAA...AGTGCTGGCATTAAGTTGCTTCCTGAGGCTTTGGGGCATCCCAGACTCAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS TCA 90 bp | TGCGCTCTTCAAAGCGCTTGCGCATCATCTCCTGAACACCTTGCTTaGCTTTGGCAAAGGTCACAGTCTCAGAGCGATTGTGGAGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: CALQSACASSPEHLA*LWQRSQSQSDCGAC Trigger: GCATGCTCCACAATCGCTCTGAGACTGTGACCTTTGCCAAAGTCAAGCAAGGTGTTCAGGAGATGATGCGCAAGCGCTTTGAAGAGCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS TCA 90 bp | ATCTGGCCCACATTGCGCTCTTCAAAGCGCTTGCGCATCATCTCCTaGACACCTTGCTTGACTTTGGCAAAGGTCACAGTCTCAGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: IWPTLRSSKRLRIIS*TPCLTLAKVTVSER Trigger: TCGCTCTGAGACTGTGACCTTTGCCAAAGTCAAGCAAGGTGTTCAGGAGATGATGCGCAAGCGCTTTGAAGAGCGCAATGTGGGCCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | CCAACATACCCTACTCTTCAGAGTCTACTTCCCCTAGAGCTGAGTCTGGGATGCCTCTTGATGCTGTCCTaGAAGGTGGGGACATTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PTYPTLQSLLPLELSLGCLLMLS*KVGTLH Trigger: GTGCAATGTCCCCACCTTCAAGGACAGCATCAAGAG...GCATCCCAGACTCAGCTCTAGGGGAAGTAGACTCTGAAGAGTAGGGTATGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | CACTTTATGAGATCCATGGGCAACGATAGCTGCCCACACTGGCGAGGCTTAAAGGAAGCCAGGAAGACCTaGTGCTGTTCCTTGACACGT | + |
|
Preference number: 5 (lower is better) Translates to: HFMRSMGNDSCPHWRGLKEARKT*CCSLTR Trigger: ACGTGTCAAGGAACAGCACAAGGTCTTCCTGGCTTC...CTTTAAGCCTCGCCAGTGTGGGCAGCTATCGTTGCCCATGGATCTCATAAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | AGCAGTCACATGCAGGGCCATATAAGGTTTGAAAAGAAACCACACTTCACATATGTTCTGCCGGAAGACTaGCCGGCGCTGCAGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSHMQGHIRFEKKPHFTYVLPED*PALQEA Trigger: TGCCTCCTGCAGCGCCGGCAAGTCTTCCGGCAGAAC...ATATGTGAAGTGTGGTTTCTTTTCAAACCTTATATGGCCCTGCATGTGACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 90 bp | CAGTCTCAGAGCGATTGTGGAGCATGCTCACAATGGTGTCCATGCTaGGGAACATCTCAACTAGCACCTGATACTTGTAGGGTAGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: QSQSDCGACSQWCPC*GTSQLAPDTCRVGQ Trigger: TTGTCCTACCCTACAAGTATCAGGTGCTAGTTGAGATGTTCCGCAGCATGGACACCATTGTGAGCATGCTCCACAATCGCTCTGAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 90 bp | TCACAGTCTCAGAGCGATTGTGGAGCATGCTCACAATGGTGTCCATaGTGCGGAACATCTCAACTAGCACCTGATACTTGTAGGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQSQSDCGACSQWCP*CGTSQLAPDTCRVG Trigger: TCCTACCCTACAAGTATCAGGTGCTAGTTGAGATGTTCCGCAGCATGGACACCATTGTGAGCATGCTCCACAATCGCTCTGAGACTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | TGGCAAAGGTCACAGTCTCAGAGCGATTGTGGAGCATGCTCACAATaGTGTCCATGCTGCGGAACATCTCAACTAGCACCTGATACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WQRSQSQSDCGACSQ*CPCCGTSQLAPDTC Trigger: ACAAGTATCAGGTGCTAGTTGAGATGTTCCGCAGCATGGACACCATTGTGAGCATGCTCCACAATCGCTCTGAGACTGTGACCTTTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 90 bp | ACACCTTGCTTGACTTTGGCAAAGGTCACAGTCTCAGAGCGATTGTaGAGCATGCTCACAATGGTGTCCATGCTGCGGAACATCTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: TPCLTLAKVTVSERL*SMLTMVSMLRNIST Trigger: AGTTGAGATGTTCCGCAGCATGGACACCATTGTGAGCATGCTCCACAATCGCTCTGAGACTGTGACCTTTGCCAAAGTCAAGCAAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | TTTGAAAAGAAACCACACTTCACATATTTACAGAAGGCCCAATTTCACTCTCAGGGCACCGTGTCATCCTaGCCAGCTGCTTCTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: FEKKPHFTYLQKAQFHSQGTVSS*PAASGP Trigger: AGGTCCAGAAGCAGCTGGCAAGGATGACACGGTGCC...CTGAGAGTGAAATTGGGCCTTCTGTAAATATGTGAAGTGTGGTTTCTTTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | AGCAGTCACATGCAGGGCCATATAAGGTTTGAAAAGAAACCACACTTCACATATACAGTCTCAGAGCGATaGTGGAGCATGCTCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: SSHMQGHIRFEKKPHFTYTVSER*WSMLTM Trigger: CATTGTGAGCATGCTCCACAATCGCTCTGAGACTGT...ATATGTGAAGTGTGGTTTCTTTTCAAACCTTATATGGCCCTGCATGTGACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS-3UTR CAA 90 bp | ATAAGGTTTGAAAAGAAACCACACTTCACATATTTACAGAAGGCCCAATTTCACACACCTTGCTTGACTTaGGCAAAGGTCACAGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IRFEKKPHFTYLQKAQFHTPCLT*AKVTVS Trigger: TGAGACTGTGACCTTTGCCAAAGTCAAGCAAGGTGT...GTGAAATTGGGCCTTCTGTAAATATGTGAAGTGTGGTTTCTTTTCAAACCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS TCA 72 bp | CTGGGGGCCGGGCGCGCTTGCGGCTGCTGCTCCGGGTaGACGCAGGAGCCACGAGGCCACCAGGGCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGAGRACGCCSG*TQEPRGHQGSG Trigger: CCCCGAGCCCTGGTGGCCTCGTGGCTCCTGCGTTCACCCGGAGCAGCAGCCGCAAGCGCGCCCGGCCCCCAG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | TGGTCACTCCCGGGTTCGGCTGGGGGCCGGGCGCGCTaGCGGCTGCTGCTCCGGGTGAACGCAGGAGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: WSLPGSAGGRAR*RLLLRVNAGAT Trigger: CGTGGCTCCTGCGTTCACCCGGAGCAGCAGCCGCAAGCGCGCCCGGCCCCCAGCCGAACCCGGGAGTGACCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS TCA 72 bp | GGAAGACTTGCCGGCGCTGCAGGAGGCACGTGGCTGTaGGCTGGGTGGCACCGCCAGCCTCCTGGCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRLAGAAGGTWL*AGWHRQPPGPA Trigger: TGCTGGGCCAGGAGGCTGGCGGTGCCACCCAGCTCACAGCCACGTGCCTCCTGCAGCGCCGGCAAGTCTTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | GGACACACCCTTCAGGGCGCTCGGAGAGGCAGCAGGTaGGGTGGCTGGCGGAGTGGCCGGGAGTGGTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GHTLQGARRGSR*GGWRSGREWWS Trigger: ACTCCACCACTCCCGGCCACTCCGCCAGCCACCCCACCTGCTGCCTCTCCGAGCGCCCTGAAGGGTGTGTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 72 bp | CGTTCCACCAGGTTCTGCCGGAAGACTTGCCGGCGCTaGAGGAGGCACGTGGCTGTGAGCTGGGTGGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: RSTRFCRKTCRR*RRHVAVSWVAP Trigger: CGGTGCCACCCAGCTCACAGCCACGTGCCTCCTGCAGCGCCGGCAAGTCTTCCGGCAGAACCTGGTGGAACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 72 bp | AGCACGCGGGCCAGCTCTGGCAGACGCTCTAACCGCTaGAGGCGAAGCTCCTGCTCGGGGCACCGTGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: STRASSGRRSNR*RRSSCSGHRVI Trigger: GATGACACGGTGCCCCGAGCAGGAGCTTCGCCTGCAGCGGTTAGAGCGTCTGCCAGAGCTGGCCCGCGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 90 bp | GGCTGGGGCAGTTCAGCTGGCTCAATGTCAGGCACCTCGTCCACATaGAAGCGCGGATGCCAGCGGGTCAGCTGGTCGTCCGGCACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GWGSSAGSMSGTSST*KRGCQRVSWSSGTA Trigger: GGCGGTGCCGGACGACCAGCTGACCCGCTGGCATCCGCGCTTCAATGTGGACGAGGTGCCTGACATTGAGCCAGCTGAACTGCCCCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 90 bp | GTAGAGGTCCCAGGGCTACCGGGCTCAGCCGAGCGCAGGGCCAGGTaGCTCAGGGCCTTCTCCATCTTGGGTGTCATCAAGCTCCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VEVPGLPGSAERRAR*LRAFSILGVIKLRA Trigger: TGCCCGGAGCTTGATGACACCCAAGATGGAGAAGGCCCTGAGCAACCTGGCCCTGCGCTCGGCTGAGCCCGGTAGCCCTGGGACCTCTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 72 bp | TCCTTGACACGTTCCACCAGGTTCTGCCGGAAGACTTaGCGGCGCTGCAGGAGGCACGTGGCTGTGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLTRSTRFCRKT*RRCRRHVAVSW Trigger: CCAGCTCACAGCCACGTGCCTCCTGCAGCGCCGGCAAGTCTTCCGGCAGAACCTGGTGGAACGTGTCAAGGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 72 bp | TCAATGTCAGGCACCTCGTCCACATTGAAGCGCGGATaGCAGCGGGTCAGCTGGTCGTCCGGCACCGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SMSGTSSTLKRG*QRVSWSSGTAM Trigger: CATGGCGGTGCCGGACGACCAGCTGACCCGCTGGCATCCGCGCTTCAATGTGGACGAGGTGCCTGACATTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 72 bp | CAGGCGAAGCTCCTGCTCGGGGCACCGTGTCATCCTTaGCAGCTGCTTCTGGACCTCCTTGGCCCTTATCCG | + |
|
Preference number: 6 (lower is better) Translates to: QAKLLLGAPCHP*QLLLDLLGPYP Trigger: CGGATAAGGGCCAAGGAGGTCCAGAAGCAGCTGGCAAGGATGACACGGTGCCCCGAGCAGGAGCTTCGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | TGGGCTCAGCTGGGGAACTGGGCTCAGGCAGAGAACTaGGGCAGGAGTCCAATCCAGGCAGCCGTAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WAQLGNWAQAEN*GRSPIQAAVTS Trigger: GGAGGTTACGGCTGCCTGGATTGGACTCCTGCCCCAGTTCTCTGCCTGAGCCCAGTTCCCCAGCTGAGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | CTTGGCATCTGGGGTACTAGGCTCCACAGCATTCTCTaGGACTCGGGCTCTCAGGGCCCGTGCCTGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGIWGTRLHSIL*DSGSQGPCLGS Trigger: GGAGCCCAGGCACGGGCCCTGAGAGCCCGAGTCCAAGAGAATGCTGTGGAGCCTAGTACCCCAGATGCCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | GCAGGCGAAGCTCCTGCTCGGGGCACCGTGTCATCCTaGCCAGCTGCTTCTGGACCTCCTTGGCCCTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: AGEAPARGTVSS*PAASGPPWPLS Trigger: GGATAAGGGCCAAGGAGGTCCAGAAGCAGCTGGCAAGGATGACACGGTGCCCCGAGCAGGAGCTTCGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 90 bp | TGTGGGCACCTTGGCATCTGGGGTACTAGGCTCCACAGCATTCTCTaGGACTCGGGCTCTCAGGGCCCGTGCCTGGGCTCCCAACTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: CGHLGIWGTRLHSIL*DSGSQGPCLGSQLP Trigger: CGGAAGTTGGGAGCCCAGGCACGGGCCCTGAGAGCCCGAGTCCAAGAGAATGCTGTGGAGCCTAGTACCCCAGATGCCAAGGTGCCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 90 bp | CTTGTGCTGTTCCTTGACACGTTCCACCAGGTTCTGCCGGAAGACTaGCCGGCGCTGCAGGAGGCACGTGGCTGTGAGCTGGGTGGCACC | + |
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Preference number: 6 (lower is better) Translates to: LVLFLDTFHQVLPED*PALQEARGCELGGT Trigger: GGTGCCACCCAGCTCACAGCCACGTGCCTCCTGCAGCGCCGGCAAGTCTTCCGGCAGAACCTGGTGGAACGTGTCAAGGAACAGCACAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 90 bp | ACCACCTCCATAGTGAGTGCCGGCTTCCGCTCAGACACGAAGACATaGCGCAGCACGCGGGCCAGCTCTGGCAGACGCTCTAACCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TTSIVSAGFRSDTKT*RSTRASSGRRSNRC Trigger: GCAGCGGTTAGAGCGTCTGCCAGAGCTGGCCCGCGTGCTGCGCAATGTCTTCGTGTCTGAGCGGAAGCCGGCACTCACTATGGAGGTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS TCA 72 bp | GTTCAGCTGGCTCAATGTCAGGCACCTCGTCCACATTaGAGCGCGGATGCCAGCGGGTCAGCTGGTCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: VQLAQCQAPRPH*SADASGSAGRP Trigger: CGGACGACCAGCTGACCCGCTGGCATCCGCGCTTCAATGTGGACGAGGTGCCTGACATTGAGCCAGCTGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 72 bp | AGCTCCTGCTCGGGGCACCGTGTCATCCTTGCCAGCTaGTTCTGGACCTCCTTGGCCCTTATCCGCTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: SSCSGHRVILAS*FWTSLALIRSS Trigger: GCTAGAGCGGATAAGGGCCAAGGAGGTCCAGAAGCAGCTGGCAAGGATGACACGGTGCCCCGAGCAGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | TGGACCTCCTTGGCCCTTATCCGCTCTAGCAGTGCTTaGGACACACCCTTCAGGGCGCTCGGAGAGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: WTSLALIRSSSA*DTPFRALGEAA Trigger: TGCTGCCTCTCCGAGCGCCCTGAAGGGTGTGTCCCAAGCACTGCTAGAGCGGATAAGGGCCAAGGAGGTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | TTCCTTGACACGTTCCACCAGGTTCTGCCGGAAGACTaGCCGGCGCTGCAGGAGGCACGTGGCTGTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: FLDTFHQVLPED*PALQEARGCEL Trigger: CAGCTCACAGCCACGTGCCTCCTGCAGCGCCGGCAAGTCTTCCGGCAGAACCTGGTGGAACGTGTCAAGGAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | ATAGTGAGTGCCGGCTTCCGCTCAGACACGAAGACATaGCGCAGCACGCGGGCCAGCTCTGGCAGACGCTCT | + |
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Preference number: 6 (lower is better) Translates to: IVSAGFRSDTKT*RSTRASSGRRS Trigger: AGAGCGTCTGCCAGAGCTGGCCCGCGTGCTGCGCAATGTCTTCGTGTCTGAGCGGAAGCCGGCACTCACTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 90 bp | TGCTCGGGGCACCGTGTCATCCTTGCCAGCTGCTTCTGGACCTCCTaGGCCCTTATCCGCTCTAGCAGTGCTTGGGACACACCCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: CSGHRVILASCFWTS*ALIRSSSAWDTPFR Trigger: CCTGAAGGGTGTGTCCCAAGCACTGCTAGAGCGGATAAGGGCCAAGGAGGTCCAGAAGCAGCTGGCAAGGATGACACGGTGCCCCGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 72 bp | ACCTTGTGCTGTTCCTTGACACGTTCCACCAGGTTCTaGCGGAAGACTTGCCGGCGCTGCAGGAGGCACGTG | + |
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Preference number: 6 (lower is better) Translates to: TLCCSLTRSTRF*RKTCRRCRRHV Trigger: CACGTGCCTCCTGCAGCGCCGGCAAGTCTTCCGGCAGAACCTGGTGGAACGTGTCAAGGAACAGCACAAGGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | TGCTCGGGGCACCGTGTCATCCTTGCCAGCTGCTTCTaGACCTCCTTGGCCCTTATCCGCTCTAGCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: CSGHRVILASCF*TSLALIRSSSA Trigger: AGCACTGCTAGAGCGGATAAGGGCCAAGGAGGTCCAGAAGCAGCTGGCAAGGATGACACGGTGCCCCGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | AGTTCAGCTGGCTCAATGTCAGGCACCTCGTCCACATaGAAGCGCGGATGCCAGCGGGTCAGCTGGTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSAGSMSGTSST*KRGCQRVSWSS Trigger: GGACGACCAGCTGACCCGCTGGCATCCGCGCTTCAATGTGGACGAGGTGCCTGACATTGAGCCAGCTGAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 90 bp | CAGAGCATGGAAGCGCTGGTAGGCAGGAGCTTTCTCGACACATGGTaGCTCTGTGGGCACCTTGGCATCTGGGGTACTAGGCTCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: QSMEALVGRSFLDTW*LCGHLGIWGTRLHS Trigger: GCTGTGGAGCCTAGTACCCCAGATGCCAAGGTGCCCACAGAGCAACCATGTGTCGAGAAAGCTCCTGCCTACCAGCGCTTCCATGCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | GAGCTTCTCTGTGACAGGAGGCTGGGGCAGTTCAGCTaGCTCAATGTCAGGCACCTCGTCCACATTGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: ELLCDRRLGQFS*LNVRHLVHIEA Trigger: CGCTTCAATGTGGACGAGGTGCCTGACATTGAGCCAGCTGAACTGCCCCAGCCTCCTGTCACAGAGAAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | ACCGTGTCATCCTTGCCAGCTGCTTCTGGACCTCCTTaGCCCTTATCCGCTCTAGCAGTGCTTGGGACACAC | + |
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Preference number: 6 (lower is better) Translates to: TVSSLPAASGPP*PLSALAVLGTH Trigger: GTGTGTCCCAAGCACTGCTAGAGCGGATAAGGGCCAAGGAGGTCCAGAAGCAGCTGGCAAGGATGACACGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | GAAGCGCTGGTAGGCAGGAGCTTTCTCGACACATGGTaGCTCTGTGGGCACCTTGGCATCTGGGGTACTAGG | + |
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Preference number: 6 (lower is better) Translates to: EALVGRSFLDTW*LCGHLGIWGTR Trigger: CCTAGTACCCCAGATGCCAAGGTGCCCACAGAGCAACCATGTGTCGAGAAAGCTCCTGCCTACCAGCGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | CACCGTGTCATCCTTGCCAGCTGCTTCTGGACCTCCTaGGCCCTTATCCGCTCTAGCAGTGCTTGGGACACA | + |
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Preference number: 6 (lower is better) Translates to: HRVILASCFWTS*ALIRSSSAWDT Trigger: TGTGTCCCAAGCACTGCTAGAGCGGATAAGGGCCAAGGAGGTCCAGAAGCAGCTGGCAAGGATGACACGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS TCA 72 bp | CCTGGCGGAAGCGATACGACGTGGGATACACGGTTTTaGTCTGGCCCACATTGCGCTCTTCAAAGCGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PGGSDTTWDTRF*SGPHCALQSAC Trigger: GCAAGCGCTTTGAAGAGCGCAATGTGGGCCAGATCAAAACCGTGTATCCCACGTCGTATCGCTTCCGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | ATAAACAGTTGTACTCTTTGTTCGCTTGACGGGGGATaGGCAAACGGGGGAGCCAGGGTCAGCTGGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: INSCTLCSLDGG*ANGGARVSWRA Trigger: AGCCCTCCAGCTGACCCTGGCTCCCCCGTTTGCCCATCCCCCGTCAAGCGAACAAAGAGTACAACTGTTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | ATGGAAGCGCTGGTAGGCAGGAGCTTTCTCGACACATaGTTGCTCTGTGGGCACCTTGGCATCTGGGGTACT | + |
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Preference number: 6 (lower is better) Translates to: MEALVGRSFLDT*LLCGHLGIWGT Trigger: AGTACCCCAGATGCCAAGGTGCCCACAGAGCAACCATGTGTCGAGAAAGCTCCTGCCTACCAGCGCTTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS TCA 72 bp | GGTTCAGTGAAGCCAGGAAGACCTTGTGCTGTTCCTTaGCACGTTCCACCAGGTTCTGCCGGAAGACTTGCC | + |
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Preference number: 6 (lower is better) Translates to: GSVKPGRPCAVP*HVPPGSAGRLA Trigger: GGCAAGTCTTCCGGCAGAACCTGGTGGAACGTGTCAAGGAACAGCACAAGGTCTTCCTGGCTTCACTGAACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | CGGAAGCGATACGACGTGGGATACACGGTTTTGATCTaGCCCACATTGCGCTCTTCAAAGCGCTTGCGCATC | + |
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Preference number: 6 (lower is better) Translates to: RKRYDVGYTVLI*PTLRSSKRLRI Trigger: GATGCGCAAGCGCTTTGAAGAGCGCAATGTGGGCCAGATCAAAACCGTGTATCCCACGTCGTATCGCTTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | GGAGCTTTCTCGACACATGGTTGCTCTGTGGGCACCTaGGCATCTGGGGTACTAGGCTCCACAGCATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GAFSTHGCSVGT*ASGVLGSTAFS Trigger: AGAGAATGCTGTGGAGCCTAGTACCCCAGATGCCAAGGTGCCCACAGAGCAACCATGTGTCGAGAAAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | TCCTGGCGGAAGCGATACGACGTGGGATACACGGTTTaGATCTGGCCCACATTGCGCTCTTCAAAGCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SWRKRYDVGYTV*IWPTLRSSKRL Trigger: CAAGCGCTTTGAAGAGCGCAATGTGGGCCAGATCAAAACCGTGTATCCCACGTCGTATCGCTTCCGCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | GGGTTCAGTGAAGCCAGGAAGACCTTGTGCTGTTCCTaGACACGTTCCACCAGGTTCTGCCGGAAGACTTGC | + |
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Preference number: 6 (lower is better) Translates to: GFSEARKTLCCS*TRSTRFCRKTC Trigger: GCAAGTCTTCCGGCAGAACCTGGTGGAACGTGTCAAGGAACAGCACAAGGTCTTCCTGGCTTCACTGAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 90 bp | ACATTGCACTCCTGGCGGAAGCGATACGACGTGGGATACACGGTTTaGATCTGGCCCACATTGCGCTCTTCAAAGCGCTTGCGCATCATC | + |
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Preference number: 6 (lower is better) Translates to: TLHSWRKRYDVGYTV*IWPTLRSSKRLRII Trigger: GATGATGCGCAAGCGCTTTGAAGAGCGCAATGTGGGCCAGATCAAAACCGTGTATCCCACGTCGTATCGCTTCCGCCAGGAGTGCAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 90 bp | CAGGAGCACCAGATGTTTCTCCATCTCCCCTGGACTCAGAGCAGTTaGGCAACTGTCCACCATCCTTGCACAGACCACCTCCATAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: QEHQMFLHLPWTQSS*ATVHHPCTDHLHSE Trigger: CTCACTATGGAGGTGGTCTGTGCAAGGATGGTGGACAGTTGCCAAACTGCTCTGAGTCCAGGGGAGATGGAGAAACATCTGGTGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | TTGATGCTGTCCTTGAAGGTGGGGACATTGCACTCCTaGCGGAAGCGATACGACGTGGGATACACGGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: LMLSLKVGTLHS*RKRYDVGYTVL Trigger: CAAAACCGTGTATCCCACGTCGTATCGCTTCCGCCAGGAGTGCAATGTCCCCACCTTCAAGGACAGCATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | AGATGTTTCTCCATCTCCCCTGGACTCAGAGCAGTTTaGCAACTGTCCACCATCCTTGCACAGACCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: RCFSISPGLRAV*QLSTILAQTTS Trigger: GGAGGTGGTCTGTGCAAGGATGGTGGACAGTTGCCAAACTGCTCTGAGTCCAGGGGAGATGGAGAAACATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | CAGATGTTTCTCCATCTCCCCTGGACTCAGAGCAGTTaGGCAACTGTCCACCATCCTTGCACAGACCACCTC | + |
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Preference number: 6 (lower is better) Translates to: QMFLHLPWTQSS*ATVHHPCTDHL Trigger: GAGGTGGTCTGTGCAAGGATGGTGGACAGTTGCCAAACTGCTCTGAGTCCAGGGGAGATGGAGAAACATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | TGCTTGACTTTGGCAAAGGTCACAGTCTCAGAGCGATaGTGGAGCATGCTCACAATGGTGTCCATGCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: CLTLAKVTVSER*WSMLTMVSMLR Trigger: CCGCAGCATGGACACCATTGTGAGCATGCTCCACAATCGCTCTGAGACTGTGACCTTTGCCAAAGTCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 90 bp | CACATTGCGCTCTTCAAAGCGCTTGCGCATCATCTCCTGAACACCTaGCTTGACTTTGGCAAAGGTCACAGTCTCAGAGCGATTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: HIALFKALAHHLLNT*LDFGKGHSLRAIVE Trigger: CTCCACAATCGCTCTGAGACTGTGACCTTTGCCAAAGTCAAGCAAGGTGTTCAGGAGATGATGCGCAAGCGCTTTGAAGAGCGCAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | TCACAGTCTCAGAGCGATTGTGGAGCATGCTCACAATaGTGTCCATGCTGCGGAACATCTCAACTAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: SQSQSDCGACSQ*CPCCGTSQLAP Trigger: AGGTGCTAGTTGAGATGTTCCGCAGCATGGACACCATTGTGAGCATGCTCCACAATCGCTCTGAGACTGTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CCA 72 bp | TTGACTTTGGCAAAGGTCACAGTCTCAGAGCGATTGTaGAGCATGCTCACAATGGTGTCCATGCTGCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LTLAKVTVSERL*SMLTMVSMLRN Trigger: GTTCCGCAGCATGGACACCATTGTGAGCATGCTCCACAATCGCTCTGAGACTGTGACCTTTGCCAAAGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS CAA 72 bp | CTCTTCAAAGCGCTTGCGCATCATCTCCTGAACACCTaGCTTGACTTTGGCAAAGGTCACAGTCTCAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: LFKALAHHLLNT*LDFGKGHSLRA Trigger: CGCTCTGAGACTGTGACCTTTGCCAAAGTCAAGCAAGGTGTTCAGGAGATGATGCGCAAGCGCTTTGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS TCA 72 bp | ACATTGCGCTCTTCAAAGCGCTTGCGCATCATCTCCTaGACACCTTGCTTGACTTTGGCAAAGGTCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: TLRSSKRLRIIS*TPCLTLAKVTV Trigger: GACTGTGACCTTTGCCAAAGTCAAGCAAGGTGTTCAGGAGATGATGCGCAAGCGCTTTGAAGAGCGCAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 72 bp | AGCGATTGTGGAGCATGCTCACAATGGTGTCCATGCTaGGGAACATCTCAACTAGCACCTGATACTTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SDCGACSQWCPC*GTSQLAPDTCR Trigger: CCTACAAGTATCAGGTGCTAGTTGAGATGTTCCGCAGCATGGACACCATTGTGAGCATGCTCCACAATCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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| CDS GCA 72 bp | CAGAGCGATTGTGGAGCATGCTCACAATGGTGTCCATaGTGCGGAACATCTCAACTAGCACCTGATACTTGT | + |
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Preference number: 6 (lower is better) Translates to: QSDCGACSQWCP*CGTSQLAPDTC Trigger: ACAAGTATCAGGTGCTAGTTGAGATGTTCCGCAGCATGGACACCATTGTGAGCATGCTCCACAATCGCTCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006760.3 |
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