Pregenerated sensors for CDSN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039518Ensembl transcript IDs: ENSMUST00000044804.8
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCTGTGGATGAAGCACAACCAGGCAGAAACCGACATGGAGAGCTaGGGAAGGAGAGGCACAGGTGTGCTGGAAATGGGTCTGGTAGGG | + |
|
Preference number: 1 (lower is better) Translates to: VLWMKHNQAETDMES*GRRGTGVLEMGLVG Trigger: CCCTACCAGACCCATTTCCAGCACACCTGTGCCTCTCCTTCCCCAGCTCTCCATGTCGGTTTCTGCCTGGTTGTGCTTCATCCACAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR CCA 90 bp | GATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTaGGGCACACACACACACAGAGTAACATCTGTGCTGTGGATGAAG | + |
|
Preference number: 1 (lower is better) Translates to: DPEGTGSLCQILWLP*GTHTHRVTSVLWMK Trigger: CTTCATCCACAGCACAGATGTTACTCTGTGTGTGTGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR CCA 90 bp | AAGTCCACAAAGTTTATTGAGCCCTGTCTAGGATCCAGAGGGAACTaGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACACAC | + |
|
Preference number: 1 (lower is better) Translates to: KSTKFIEPCLGSRGN*ESVPDSVAALGHTH Trigger: GTGTGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCTAGACAGGGCTCAATAAACTTTGTGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR CCA 90 bp | ACATGCAGTTTGGTTCTCAGGCGATGGATTGGACTTTGCCTTATTTaGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: TCSLVLRRWIGLCLI*QTGRSMLDLSRHPR Trigger: CCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAGGCAAAGTCCAATCCATCGCCTGAGAACCAAACTGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGAGGAAACTGGGCCCCTaGACGTCTTCCAGTTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LGSRGNWESVPDSVAALGRKLGP*TSSSWE Trigger: CTCCCAACTGGAAGACGTCCAGGGGCCCAGTTTCCT...CCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGGATGAAGCACAACCAGGCAGAAACCGACATGGAGAGCTGGGGAAGGAGAGGGAGGGCAGGAAACTaGGCCCCTGGACGTCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LWMKHNQAETDMESWGRRGRAGN*APGRLP Trigger: TGGAAGACGTCCAGGGGCCCAGTTTCCTGCCCTCCC...TCTCCTTCCCCAGCTCTCCATGTCGGTTTCTGCCTGGTTGTGCTTCATCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGTACTACCAGGCCCTCTAGAAGCACAGGAGGTCTACTACCCAGGAACTAAGGGAACTGGGAGTCTGTaGCAGATTCTGTGGCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: GVLPGPLEAQEVYYPGTKGTGSL*QILWLP Trigger: GGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCC...CTTAGTTCCTGGGTAGTAGACCTCCTGTGCTTCTAGAGGGCCTGGTAGTACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGTCTCAGGCGATGGATTaGACTTTGCCTTATTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LGSRGNWESVPDSVAALGSQAMD*TLPYLA Trigger: TGCCAAATAAGGCAAAGTCCAATCCATCGCCTGAGA...CCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACCACCATTTGGAGTGTTaGATAAAGTCAAGAGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: IQRELGVCARFCGCPGAHHHLEC*IKSRAS Trigger: TGATGCTCTTGACTTTATTCAACACTCCAAATGGTG...GTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGTGTGCGTTCGAGGACTTCGAGGTGACTGGCAATTaGAAAATAGCTGGCATGCGT | + |
|
Preference number: 2 (lower is better) Translates to: SMLDLSRHPRLRCAFEDFEVTGN*KIAGMR Trigger: ACGCATGCCAGCTATTTTCCAATTGCCAGTCACCTC...GAAGTCCTCGAACGCACACCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGAACACCCCAGCAGCATaGTGCAGAAGCACCAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LIWQTGRSMLDLSRHPRLNTPAA*CRSTRK Trigger: TTTCCTGGTGCTTCTGCACCATGCTGCTGGGGTGTT...CAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACAGAAACTCATGATGAATaGTGGGAACCCAACAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: DPEGTGSLCQILWLPWGTETHDE*WEPNNL Trigger: TAAATTGTTGGGTTCCCACCATTCATCATGAGTTTC...TGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACCTGGACGTCTTCCAGTaGGGAGGTGACTGGCAATTG | + |
|
Preference number: 3 (lower is better) Translates to: IQRELGVCARFCGCPGAHLDVFQ*GGDWQL Trigger: CAATTGCCAGTCACCTCCCAACTGGAAGACGTCCAG...GTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCAGGAGGTGACTGGCAATaGGAAAATAGCTGGCATGCG | + |
|
Preference number: 3 (lower is better) Translates to: RIQRELGVCARFCGCPGAGGDWQ*ENSWHA Trigger: CGCATGCCAGCTATTTTCCAATTGCCAGTCACCTCC...TGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR CCA 72 bp | GAGGGCAGGAAACTGGGCCCCTGGACGTCTTCCAGTTaGGAGGTGACTGGCAATTGGAAAATAGCTGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: EGRKLGPWTSSS*EVTGNWKIAGM Trigger: CATGCCAGCTATTTTCCAATTGCCAGTCACCTCCCAACTGGAAGACGTCCAGGGGCCCAGTTTCCTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR CCA 72 bp | GGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTaGGGCACACACACACACAGAGTAACATCTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GTGSLCQILWLP*GTHTHRVTSVL Trigger: CAGCACAGATGTTACTCTGTGTGTGTGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR CCA 72 bp | GATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTaGCTGCCCTGGGGCACACACACACACAGAGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: DPEGTGSLCQIL*LPWGTHTHRVT Trigger: TGTTACTCTGTGTGTGTGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR CCA 72 bp | AAGTTTATTGAGCCCTGTCTAGGATCCAGAGGGAACTaGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: KFIEPCLGSRGN*ESVPDSVAALG Trigger: CCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCTAGACAGGGCTCAATAAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR CCA 72 bp | TGGGGCACACACACACACAGAGTAACATCTGTGCTGTaGATGAAGCACAACCAGGCAGAAACCGACATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WGTHTHRVTSVL*MKHNQAETDME Trigger: CTCCATGTCGGTTTCTGCCTGGTTGTGCTTCATCCACAGCACAGATGTTACTCTGTGTGTGTGTGTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACAGAGTAACATCTGTGCTGTGGATGAAGCACAACCAGGCAGAAACCGCGATGGATTGGACTTaGCCTTATTTGGCAAACGGG | + |
|
Preference number: 3 (lower is better) Translates to: HTHRVTSVLWMKHNQAETAMDWT*PYLANG Trigger: CCCGTTTGCCAAATAAGGCAAAGTCCAATCCATCGC...GGTTTCTGCCTGGTTGTGCTTCATCCACAGCACAGATGTTACTCTGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACAGAGTAACATCTGTGCTGTGGATGAAGCACAACCAGGCAGAAACCTGGACTTTGCCTTATTaGGCAAACGGGCAGAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HTHRVTSVLWMKHNQAETWTLPY*ANGQKH Trigger: ATGCTTCTGCCCGTTTGCCAAATAAGGCAAAGTCCA...GGTTTCTGCCTGGTTGTGCTTCATCCACAGCACAGATGTTACTCTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR CCA 72 bp | GCATGGTGCAGAAGCACCAGGAAAAGACGAGGAGGATaGAGTCCACCATTTGGAGTGTTGAATAAAGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: AWCRSTRKRRGG*SPPFGVLNKVK Trigger: CTTGACTTTATTCAACACTCCAAATGGTGGACTCCATCCTCCTCGTCTTTTCCTGGTGCTTCTGCACCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACCTGACTGAGAGCCACTaGCTCCTGGCCGGGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IQRELGVCARFCGCPGAHLTESH*LLAGSR Trigger: GCGGCTCCCGGCCAGGAGGCAGTGGCTCTCAGTCAG...GTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACACACACGGAGCCACTGCTTCCTaGCTGAGAGCCACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RELGVCARFCGCPGAHTHGATAS*LRATAS Trigger: GGAAGCAGTGGCTCTCAGTCAGGAAGCAGTGGCTCC...GTGTGTGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACATACAGGGCCGCAGGTTaGAGCTGCTGCTCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRGNWESVPDSVAALGHTYRAAG*SCCSGK Trigger: CTTCCCAGAGCAGCAGCTCCAACCTGCGGCCCTGTA...TGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | AGGATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACCACTGCTTCCTGACTaGGAGCCACTGCTTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RIQRELGVCARFCGCPGAPLLPD*EPLLPD Trigger: GTCAGGAAGCAGTGGCTCTCAGTCAGGAAGCAGTGG...TGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | AGGATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACTGACTGGGAGCCACTaGTTCCTGACTGAGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RIQRELGVCARFCGCPGALTGSH*FLTESH Trigger: GTGGCTCTCAGTCAGGAAGCAGTGGCTCCCAGTCAG...TGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGAGAGCCACTGCCTCCTaGCCGGGAGCCGCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IWQTGRSMLDLSRHPRLRRATAS*PGAARA Trigger: GGCTCTGGCGGCTCCCGGCCAGGAGGCAGTGGCTCT...CCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCATGCTGCTCTGGGAAGTaGACGAGCCTCCAGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RIQRELGVCARFCGCPGACCSGK*TSLQTE Trigger: CTCAGTCTGGAGGCTCGTCCACTTCCCAGAGCAGCA...TGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGTTGGAGCTGCTGCTCTaGGAAGTGGACGAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSRGNWESVPDSVAALGLELLL*EVDEPP Trigger: TGGAGGCTCGTCCACTTCCCAGAGCAGCAGCTCCAA...CCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGTGTGCGTTCGAGGACTTCCCGCTGCTTCCTGACTaGGAGCCACTGCCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMLDLSRHPRLRCAFEDFPLLPD*EPLPPG Trigger: GCCAGGAGGCAGTGGCTCTCAGTCAGGAAGCAGCGG...GAAGTCCTCGAACGCACACCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGATGAAGCACAACCAGGCAGAAACCGACATGGAGAGCTGGGGAAGGAGACCGCTGCTTCCTGACTaGGAGCCGCTGCTTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LWMKHNQAETDMESWGRRPLLPD*EPLLPD Trigger: GTCAGGAAGCAGCGGCTCTCAGTCAGGAAGCAGCGG...TCTCCTTCCCCAGCTCTCCATGTCGGTTTCTGCCTGGTTGTGCTTCATCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACACACACGACGAGCCTCCAGACTaGGACATGCCTGATGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RELGVCARFCGCPGAHTHDEPPD*DMPDVL Trigger: CAAGACATCAGGCATGTCTCAGTCTGGAGGCTCGTC...GTGTGTGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | CACACACACAGAGTAACATCTGTGCTGTGGATGAAGCACAACCAGGCAGAAACCCCAGTGCCACAGGGCTaGACCCCGCCAGAGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HTHRVTSVLWMKHNQAETPVPQG*TPPEPT Trigger: CGTGGGCTCTGGCGGGGTTCAGCCCTGTGGCACTGG...GGTTTCTGCCTGGTTGTGCTTCATCCACAGCACAGATGTTACTCTGTGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACACACACCCACCAGAGCCATGTTaGTCCACCACCACCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: RELGVCARFCGCPGAHTHPPEPC*STTTTT Trigger: TGTAGTGGTGGTGGTGGAGCAACATGGCTCTGGTGG...GTGTGTGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACACACACGCTGAAGGACGATTTTaGCAGAGGAGAGGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RELGVCARFCGCPGAHTHAEGRF*QRRGRS Trigger: GCTCCTCCCTCTCCTCTGGCAAAATCGTCCTTCAGC...GTGTGTGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCTGCTGGATCCACCTTaGCTGCTGATGCTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSRGNWESVPDSVAALGLLDPP*LLMLLE Trigger: CTCCAACAGCATCAGCAGCCAAGGTGGATCCAGCAG...CCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACCTGCTGGATCCACCTTaGCTGCTGAAGCTGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IQRELGVCARFCGCPGAHLLDPP*LLKLLD Trigger: ATCCAGCAGCTTCAGCAGCCAAGGTGGATCCAGCAG...GTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | GATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACAGGACCAGATAACTGTTaGCAGAGCCACCCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: DPEGTGSLCQILWLPWGTGPDNC*QSHPPP Trigger: AGGTGGTGGGTGGCTCTGCCAACAGTTATCTGGTCC...TGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGCCAGAGCCCACGGGCTaGAACGCAACGCCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IWQTGRSMLDLSRHPRLRPEPTG*NATPTG Trigger: CCCAGTGGGCGTTGCGTTCCAGCCCGTGGGCTCTGG...CCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGTGCTGTGGATGAAGCACAACCAGGCAGAAACCGACATGGAGAGCTGGGGGGTCATTCGGGGAGGTaGTCCTCGTGGGGTCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ICAVDEAQPGRNRHGELGGHSGR*SSWGPY Trigger: GTAAGGACCCCACGAGGATCACCTCCCCGAATGACC...CCCCAGCTCTCCATGTCGGTTTCTGCCTGGTTGTGCTTCATCCACAGCACAGAT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGATGAAGCACAACCAGGCAGAAACCGACATGGAGAGCTGGGGAAGGAGACTGACTGAGAGCCGCTaGTTCCTGACTGAGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LWMKHNQAETDMESWGRRLTESR*FLTESR Trigger: GCGGCTCTCAGTCAGGAAGCAGCGGCTCTCAGTCAG...TCTCCTTCCCCAGCTCTCCATGTCGGTTTCTGCCTGGTTGTGCTTCATCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGAGGTCTACTACCCAGGAACTAAGAAGAGACCTTGGACCCCAAGAAGGCCTGACTGGGAGCCACTaGTTCCTGACTGGGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HRRSTTQELRRDLGPQEGLTGSH*FLTGSR Trigger: GCGGCTCCCAGTCAGGAAGCAGTGGCTCCCAGTCAG...GCCTTCTTGGGGTCCAAGGTCTCTTCTTAGTTCCTGGGTAGTAGACCTCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTTATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGGCCGCAGGTTGGAGCTaGTGCTCTGGGAAGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: CLIWQTGRSMLDLSRHPRAAGWS*CSGKWT Trigger: CGTCCACTTCCCAGAGCAGCAGCTCCAACCTGCGGC...CCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTACTACCAGGCCCTCTAGAAGCACAGGAGGTCTACTACCCAGGAACTAAGCCACTGCTTCCTGACTaGGAGCCGCTGCTTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GVLPGPLEAQEVYYPGTKPLLPD*EPLLPD Trigger: GTCAGGAAGCAGCGGCTCCCAGTCAGGAAGCAGTGG...CTTAGTTCCTGGGTAGTAGACCTCCTGTGCTTCTAGAGGGCCTGGTAGTACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGTGCTGTGGATGAAGCACAACCAGGCAGAAACCGACATGGAGAGCTGGGGCCACTGCTTCCTGACTaGGAGCCACTGCTTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ICAVDEAQPGRNRHGELGPLLPD*EPLLPD Trigger: GTCAGGAAGCAGTGGCTCCCAGTCAGGAAGCAGTGG...CCCCAGCTCTCCATGTCGGTTTCTGCCTGGTTGTGCTTCATCCACAGCACAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGTGTGCGTTCGAGGACTTCGGTAGCCACTGGAACTaGAAGAGCCACGGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SMLDLSRHPRLRCAFEDFGSHWN*KSHGWG Trigger: TCCCCAGCCGTGGCTCTTCCAGTTCCAGTGGCTACC...GAAGTCCTCGAACGCACACCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGACGGAGGGGACAGGCTaGGGAGAGCCATTCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: IWQTGRSMLDLSRHPRLRTEGTG*GEPFRP Trigger: TGGTCTGAATGGCTCTCCTCAGCCTGTCCCCTCCGT...CCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGAGGTCTACTACCCAGGAACTAAGAAGAGACCTTGGACCCCAAGAAGGCCTGCGGGGCCTCCATTaGTACAGGGCATGCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HRRSTTQELRRDLGPQEGLRGLH*YRACLE Trigger: TTCAAGGCATGCCCTGTAGCAATGGAGGCCCCGCAG...GCCTTCTTGGGGTCCAAGGTCTCTTCTTAGTTCCTGGGTAGTAGACCTCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGAGGGCAGGGCTTACCTaGGGGGCCTCCATTGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: IWQTGRSMLDLSRHPRLRRAGLT*GASIAT Trigger: TGTAGCAATGGAGGCCCCGCAGGTAAGCCCTGCCCT...CCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGTGTGCGTTCGAGGACTTCAAGTGGCTCTCCCTGTaGCTCTCCCTGTGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMLDLSRHPRLRCAFEDFKWLSL*LSLWQR Trigger: TCTCTGCCACAGGGAGAGCCACAGGGAGAGCCACTT...GAAGTCCTCGAACGCACACCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | CACAGGAGGTCTACTACCCAGGAACTAAGAAGAGACCTTGGACCCCAAGAAGGCATCCACCTTGGCTGCTaGAGCTGCTGGATCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRRSTTQELRRDLGPQEGIHLGC*SCWIHL Trigger: AAGGTGGATCCAGCAGCTTCAGCAGCCAAGGTGGAT...GCCTTCTTGGGGTCCAAGGTCTCTTCTTAGTTCCTGGGTAGTAGACCTCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | CTTATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGAGCCACTGCTTCCTaGCTGGGAGCCACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIWQTGRSMLDLSRHPRLRATAS*LGATAS Trigger: GGAAGCAGTGGCTCCCAGTCAGGAAGCAGTGGCTCT...CAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTTATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGACCCATCTTCCTGACTaGGAGCCGCTGCTTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLIWQTGRSMLDLSRHPRTHLPD*EPLLPD Trigger: GTCAGGAAGCAGCGGCTCTCAGTCAGGAAGATGGGT...CCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTTATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGGCTTACCCATCTTCCTaGCTGAGAGCCGCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLIWQTGRSMLDLSRHPRAYPSS*LRAAAS Trigger: GGAAGCAGCGGCTCTCAGTCAGGAAGATGGGTAAGC...CCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGGTTTCTGGACAGAGGTaGTGGGAGGGCAGGGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: IWQTGRSMLDLSRHPRLRVSGQR*WEGRAY Trigger: GTAAGCCCTGCCCTCCCATCACCTCTGTCCAGAAAC...CCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | CACACACACAGAGTAACATCTGTGCTGTGGATGAAGCACAACCAGGCAGAAACCTTGCTGCCGCAGGGCTaGAGGACGATTTTGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHRVTSVLWMKHNQAETLLPQG*RTILPE Trigger: CTCTGGCAAAATCGTCCTTCAGCCCTGCGGCAGCAA...GGTTTCTGCCTGGTTGTGCTTCATCCACAGCACAGATGTTACTCTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGAGGTCTACTACCCAGGAACTAAGAAGAGACCTTGGACCCCAAGAAGGCCCCCACTGTAGGTCATaGCTGGGACCAGATAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRRSTTQELRRDLGPQEGPHCRS*LGPDNC Trigger: ACAGTTATCTGGTCCCAGGCATGACCTACAGTGGGG...GCCTTCTTGGGGTCCAAGGTCTCTTCTTAGTTCCTGGGTAGTAGACCTCCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTACTACCAGGCCCTCTAGAAGCACAGGAGGTCTACTACCCAGGAACTAAGCTGCTGGATCCACCATaGCTGCTGAAACTGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVLPGPLEAQEVYYPGTKLLDPP*LLKLLD Trigger: ATCCAGCAGTTTCAGCAGCCATGGTGGATCCAGCAG...CTTAGTTCCTGGGTAGTAGACCTCCTGTGCTTCTAGAGGGCCTGGTAGTACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGCCTGAAGAACTTCCCTaGGAGCTGCTGGATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CLIWQTGRSMLDLSRHPRPEELP*ELLDPP Trigger: TGGTGGATCCAGCAGCTCCCAGGGAAGTTCTTCAGG...CCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGATGAAGCACAACCAGGCAGAAACCGACATGGAGAGCTGGGGAAGGAGAACTGTAGGTCATGCCTaGGACCAGATAACTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LWMKHNQAETDMESWGRRTVGHA*DQITVG Trigger: GCCAACAGTTATCTGGTCCCAGGCATGACCTACAGT...TCTCCTTCCCCAGCTCTCCATGTCGGTTTCTGCCTGGTTGTGCTTCATCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGTCCACCATTTGGAGTGTTGAATAAAGTCAAGAGCATCATCCGGCTAACCCTACAGGGCATGCCTTaGAACCCAGGGCCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WSPPFGVLNKVKSIIRLTLQGMP*NPGPPE Trigger: CTCTGGTGGCCCTGGGTTTCAAGGCATGCCCTGTAG...GGTTAGCCGGATGATGCTCTTGACTTTATTCAACACTCCAAATGGTGGACTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTTATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGCTCCAGACTGAGACATaGCTGATGTCTTGTCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: CLIWQTGRSMLDLSRHPRLQTET*LMSCHR Trigger: CCGGTGACAAGACATCAGGCATGTCTCAGTCTGGAG...CCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGTTAAGACTTCTCAAGTaGCTCTCCCTGTGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IWQTGRSMLDLSRHPRLRLRLLK*LSLWLS Trigger: GGAGAGCCACAGGGAGAGCCACTTGAGAAGTCTTAA...CCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| 3UTR CAA 72 bp | TCGCTGAGACATGCAGTTTGGTTCTCAGGCGATGGATaGGACTTTGCCTTATTTGGCAAACGGGCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRHAVWFSGDG*DFALFGKRAEA Trigger: TGCTTCTGCCCGTTTGCCAAATAAGGCAAAGTCCAATCCATCGCCTGAGAACCAAACTGCATGTCTCAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGTCCACCATTTGGAGTGTTGAATAAAGTCAAGAGCATCATCCGGCTAACCATATATCAAGGATCCTaGAGAACTTCCCTGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSPPFGVLNKVKSIIRLTIYQGS*RTSLGA Trigger: AGCTCCCAGGGAAGTTCTTCAGGATCCTTGATATAT...GGTTAGCCGGATGATGCTCTTGACTTTATTCAACACTCCAAATGGTGGACTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS TCA 90 bp | CCCGAGCAAGGGCCCTTAGAGCTGACAGAGCCAGTGCCACAGGGCTaGACCCCGCCAGAGCCCACGGGCTGGAACGCAACGCCCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PEQGPLELTEPVPQG*TPPEPTGWNATPTG Trigger: CCCAGTGGGCGTTGCGTTCCAGCCCGTGGGCTCTGGCGGGGTTCAGCCCTGTGGCACTGGCTCTGTCAGCTCTAAGGGCCCTTGCTCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 90 bp | GGGCTGAACCCCGCCAGAGCCCACGGGCTGGAACGCAACGCCCACTaGGTAGCCACTGGAACTGGAAGAGCCACGGCTGGGGATGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLNPARAHGLERNAH*VATGTGRATAGDDG Trigger: CCCATCATCCCCAGCCGTGGCTCTTCCAGTTCCAGTGGCTACCCAGTGGGCGTTGCGTTCCAGCCCGTGGGCTCTGGCGGGGTTCAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS TCA 90 bp | GGGCAGGGCTTACCTGCGGGGCCTCCATTGCTACAGGGCATGCCTTaGAACCCAGGGCCACCAGAGCCATGTTGCTCCACCACCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: GQGLPAGPPLLQGMP*NPGPPEPCCSTTTT Trigger: AGTGGTGGTGGTGGAGCAACATGGCTCTGGTGGCCCTGGGTTTCAAGGCATGCCCTGTAGCAATGGAGGCCCCGCAGGTAAGCCCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 90 bp | AGGGAGAGTCGGGCACGTTGGAGCTACAGGGCCGCAGGTTGGAGCTaGTGCTCTGGGAAGTGGACGAGCCTCCAGACTGAGACATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RESRARWSYRAAGWS*CSGKWTSLQTETCL Trigger: CAGGCATGTCTCAGTCTGGAGGCTCGTCCACTTCCCAGAGCAGCAGCTCCAACCTGCGGCCCTGTAGCTCCAACGTGCCCGACTCTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 90 bp | TGGGAGGGCAGGGCTTACCTGCGGGGCCTCCATTGCTACAGGGCATaGCTTGAAACCCAGGGCCACCAGAGCCATGTTGCTCCACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: WEGRAYLRGLHCYRA*LETQGHQSHVAPPP Trigger: TGGTGGTGGAGCAACATGGCTCTGGTGGCCCTGGGTTTCAAGGCATGCCCTGTAGCAATGGAGGCCCCGCAGGTAAGCCCTGCCCTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 90 bp | GAGAGTCGGGCACGTTGGAGCTACAGGGCCGCAGGTTGGAGCTGCTaGTCTGGGAAGTGGACGAGCCTCCAGACTGAGACATGCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ESRARWSYRAAGWSC*SGKWTSLQTETCLM Trigger: CATCAGGCATGTCTCAGTCTGGAGGCTCGTCCACTTCCCAGAGCAGCAGCTCCAACCTGCGGCCCTGTAGCTCCAACGTGCCCGACTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 90 bp | GCCATAGGGTTTCTGGACAGAGGTGATGGGAGGGCAGGGCTTACCTaGGGGGCCTCCATTGCTACAGGGCATGCCTTGAAACCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AIGFLDRGDGRAGLT*GASIATGHALKPRA Trigger: GGCCCTGGGTTTCAAGGCATGCCCTGTAGCAATGGAGGCCCCGCAGGTAAGCCCTGCCCTCCCATCACCTCTGTCCAGAAACCCTATGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | GATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACTACAGGGCCGCAGGTaGGAGCTGCTGCTCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DPEGTGSLCQILWLPWGTLQGRR*ELLLWE Trigger: TTCCCAGAGCAGCAGCTCCAACCTGCGGCCCTGTAG...TGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS TCA 90 bp | GGGCTGTTGAGGCCACAGAGCTTGACACCCACGGAGGGGACAGGCTaGGGAGAGCCATTCAGACCACCATTCAACGGGGAGGAGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: GLLRPQSLTPTEGTG*GEPFRPPFNGEEGT Trigger: TGTTCCCTCCTCCCCGTTGAATGGTGGTCTGAATGGCTCTCCTCAGCCTGTCCCCTCCGTGGGTGTCAAGCTCTGTGGCCTCAACAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 90 bp | CGTTGGAGCTACAGGGCCGCAGGTTGGAGCTGCTGCTCTGGGAAGTaGACGAGCCTCCAGACTGAGACATGCCTGATGTCTTGTCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: RWSYRAAGWSCCSGK*TSLQTETCLMSCHR Trigger: CCGGTGACAAGACATCAGGCATGTCTCAGTCTGGAGGCTCGTCCACTTCCCAGAGCAGCAGCTCCAACCTGCGGCCCTGTAGCTCCAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | AGGATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCAGCCACCAGAGCCATGTaGCTCCACCACCACCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: RIQRELGVCARFCGCPGAATRAM*LHHHHY Trigger: GTAGTGGTGGTGGTGGAGCAACATGGCTCTGGTGGC...TGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACAGCTACAGGGCATGCCTaGAAACCCAGGGCCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRGNWESVPDSVAALGHTATGHA*KPRATR Trigger: TCTGGTGGCCCTGGGTTTCAAGGCATGCCCTGTAGC...TGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | AGGATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCAACTGCTGGATCCACCTaGGCTGCTGAAGCTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RIQRELGVCARFCGCPGATAGST*AAEAAG Trigger: TCCAGCAGCTTCAGCAGCCAAGGTGGATCCAGCAGT...TGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGAGGTCTACTACCCAGGAACTAAGAAGAGACCTTGGACCCCAAGAAGGCGGAGAGTCGGGCACGTaGGAGCTACAGGGCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HRRSTTQELRRDLGPQEGGESGT*ELQGRR Trigger: CCTGCGGCCCTGTAGCTCCAACGTGCCCGACTCTCC...GCCTTCTTGGGGTCCAAGGTCTCTTCTTAGTTCCTGGGTAGTAGACCTCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS TCA 90 bp | CGCAGGTTGGAGCTGCTGCTCTGGGAAGTGGACGAGCCTCCAGACTaGGACATGCCTGATGTCTTGTCACCGGTTGGTAGAGCAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRLELLLWEVDEPPD*DMPDVLSPVGRAEP Trigger: TGGCTCTGCTCTACCAACCGGTGACAAGACATCAGGCATGTCTCAGTCTGGAGGCTCGTCCACTTCCCAGAGCAGCAGCTCCAACCTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 90 bp | TGGAGCTGCTGCTCTGGGAAGTGGACGAGCCTCCAGACTGAGACATaGCTGATGTCTTGTCACCGGTTGGTAGAGCAGAGCCACTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: WSCCSGKWTSLQTET*LMSCHRLVEQSHFR Trigger: CCGGAAGTGGCTCTGCTCTACCAACCGGTGACAAGACATCAGGCATGTCTCAGTCTGGAGGCTCGTCCACTTCCCAGAGCAGCAGCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 90 bp | CCCATTGAGAACTGCTGCTTACCCATCTTCCTGACTGAGAGCCGCTaGTTCCTGACTGGGAGCCACTGCTTCCTGACTGAGAGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PIENCCLPIFLTESR*FLTGSHCFLTESHC Trigger: GCAGTGGCTCTCAGTCAGGAAGCAGTGGCTCCCAGTCAGGAAGCAGCGGCTCTCAGTCAGGAAGATGGGTAAGCAGCAGTTCTCAATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 90 bp | GAGCTGCTGGATCCACCATGGCTGCTGAAACTGCTGGATCCACCTTaGCTGCTGAAGCTGCTGGATCCACCTTGGCTGCTGATGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ELLDPPWLLKLLDPP*LLKLLDPPWLLMLL Trigger: CAACAGCATCAGCAGCCAAGGTGGATCCAGCAGCTTCAGCAGCCAAGGTGGATCCAGCAGTTTCAGCAGCCATGGTGGATCCAGCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | GATCCAGAGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACAATGTCTTGTCACCGGTaGGTAGAGCAGAGCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: DPEGTGSLCQILWLPWGTMSCHR*VEQSHF Trigger: GAAGTGGCTCTGCTCTACCAACCGGTGACAAGACAT...TGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAACTGGGAGTCTGTGCCAGATTCTGTGGCTGCCCTGGGGCACACACACACACTGCTGCTTACCCATaGAGAACTGCTGCTTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RELGVCARFCGCPGAHTHTAAYP*RTAAYP Trigger: TGGGTAAGCAGCAGTTCTCAATGGGTAAGCAGCAGT...GTGTGTGTGTGCCCCAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 90 bp | ATCAAGGATCCTGAAGAACTTCCCTGGGAGCTGCTGGATCCACCATaGCTGCTGAAACTGCTGGATCCACCTTGGCTGCTGAAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IKDPEELPWELLDPP*LLKLLDPPWLLKLL Trigger: CAGCAGCTTCAGCAGCCAAGGTGGATCCAGCAGTTTCAGCAGCCATGGTGGATCCAGCAGCTCCCAGGGAAGTTCTTCAGGATCCTTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 90 bp | AAACTGCTGGATCCACCTTGGCTGCTGAAGCTGCTGGATCCACCTTaGCTGCTGATGCTGTTGGAGCCAGTCTTTCCAATGAGACAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KLLDPPWLLKLLDPP*LLMLLEPVFPMRQG Trigger: CCCTTGTCTCATTGGAAAGACTGGCTCCAACAGCATCAGCAGCCAAGGTGGATCCAGCAGCTTCAGCAGCCAAGGTGGATCCAGCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | CTTATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGTTGAGGCCACAGAGCTaGACACCCACGGAGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LIWQTGRSMLDLSRHPRLLRPQS*TPTEGT Trigger: TGTCCCCTCCGTGGGTGTCAAGCTCTGTGGCCTCAA...CAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGACTTGGGTCAGAATGTaGCGGATGGAACGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IWQTGRSMLDLSRHPRLRTWVRM*RMERQG Trigger: GCCCTGCCGTTCCATCCGCAACATTCTGACCCAAGT...CCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 90 bp | AGAGAAACTTTGGGATCCATTAACTGGGGTCCCAAAGGCTTCACTTaGGTCAGAATGTTGCGGATGGAACGGCAGGGCACTCTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RETLGSINWGPKGFT*VRMLRMERQGTLPG Trigger: CCCTGGAAGAGTGCCCTGCCGTTCCATCCGCAACATTCTGACCCAAGTGAAGCCTTTGGGACCCCAGTTAATGGATCCCAAAGTTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 90 bp | CCCTGTGGCTCTCCCTGTGGCAGAGAAACTTTGGGATCCATTAACTaGGGTCCCAAAGGCTTCACTTGGGTCAGAATGTTGCGGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PCGSPCGRETLGSIN*GPKGFTWVRMLRME Trigger: TTCCATCCGCAACATTCTGACCCAAGTGAAGCCTTTGGGACCCCAGTTAATGGATCCCAAAGTTTCTCTGCCACAGGGAGAGCCACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | CTTATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGGCTGCTGGATCCACCTaGGCTGCTGATGCTGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LIWQTGRSMLDLSRHPRLAAGST*AADAVG Trigger: TCCAACAGCATCAGCAGCCAAGGTGGATCCAGCAGC...CAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTTATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGCTGGGGATGATGGGGTaGCTAGAGAAGTACTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CLIWQTGRSMLDLSRHPRLGMMG*LEKYLP Trigger: GGGCAAGTACTTCTCTAGCAACCCCATCATCCCCAG...CCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAATAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGGCAAACGGGCAGAAGCATGCTTGACTTATCCAGGCACCCAAGGTTGAGGACTCTTCCAGGGCTGTaGAGGCCACAGAGCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: IWQTGRSMLDLSRHPRLRTLPGL*RPQSLT Trigger: TGTCAAGCTCTGTGGCCTCAACAGCCCTGGAAGAGT...CCTCAACCTTGGGTGCCTGGATAAGTCAAGCATGCTTCTGCCCGTTTGCCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 90 bp | TTCCTGAACTTCCGGACTGAGAACTGCTGCTTACCCATTGAGAACTaGTGCTTACCCATCTTCCTGACTGAGAGCCGCTGCTTCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: FLNFRTENCCLPIEN*CLPIFLTESRCFLT Trigger: AGTCAGGAAGCAGCGGCTCTCAGTCAGGAAGATGGGTAAGCAGCAGTTCTCAATGGGTAAGCAGCAGTTCTCAGTCCGGAAGTTCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 90 bp | TACCCTGTTCCTGGTTTATATATCAAGGATCCTGAAGAACTTCCCTaGGAGCTGCTGGATCCACCATGGCTGCTGAAACTGCTGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: YPVPGLYIKDPEELP*ELLDPPWLLKLLDP Trigger: TGGATCCAGCAGTTTCAGCAGCCATGGTGGATCCAGCAGCTCCCAGGGAAGTTCTTCAGGATCCTTGATATATAAACCAGGAACAGGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCCACCATTTGGAGTGTTGAATAAAGTCAAGAGCATCATCCGGCTAACCTTGCTAGAGAAGTACTaGCCCTCAGAGACTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WSPPFGVLNKVKSIIRLTLLEKY*PSETGG Trigger: GCCCCCAGTCTCTGAGGGCAAGTACTTCTCTAGCAA...GGTTAGCCGGATGATGCTCTTGACTTTATTCAACACTCCAAATGGTGGACTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS TCA 72 bp | GGGCCCTTAGAGCTGACAGAGCCAGTGCCACAGGGCTaGACCCCGCCAGAGCCCACGGGCTGGAACGCAACG | + |
|
Preference number: 6 (lower is better) Translates to: GPLELTEPVPQG*TPPEPTGWNAT Trigger: CGTTGCGTTCCAGCCCGTGGGCTCTGGCGGGGTTCAGCCCTGTGGCACTGGCTCTGTCAGCTCTAAGGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 72 bp | CGGGCACGTTGGAGCTACAGGGCCGCAGGTTGGAGCTaGTGCTCTGGGAAGTGGACGAGCCTCCAGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RARWSYRAAGWS*CSGKWTSLQTE Trigger: CTCAGTCTGGAGGCTCGTCCACTTCCCAGAGCAGCAGCTCCAACCTGCGGCCCTGTAGCTCCAACGTGCCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CAA 72 bp | GGAGAGTCGGGCACGTTGGAGCTACAGGGCCGCAGGTaGGAGCTGCTGCTCTGGGAAGTGGACGAGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GESGTLELQGRR*ELLLWEVDEPP Trigger: TGGAGGCTCGTCCACTTCCCAGAGCAGCAGCTCCAACCTGCGGCCCTGTAGCTCCAACGTGCCCGACTCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CAA 90 bp | AGGGCAGGGCTTACCTGCGGGGCCTCCATTGCTACAGGGCATGCCTaGAAACCCAGGGCCACCAGAGCCATGTTGCTCCACCACCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: RAGLTCGASIATGHA*KPRATRAMLLHHHH Trigger: GTGGTGGTGGTGGAGCAACATGGCTCTGGTGGCCCTGGGTTTCAAGGCATGCCCTGTAGCAATGGAGGCCCCGCAGGTAAGCCCTGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS TCA 72 bp | CCACCTCATAGCCGCCATAGGGTTTCTGGACAGAGGTaGTGGGAGGGCAGGGCTTACCTGCGGGGCCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PPHSRHRVSGQR*WEGRAYLRGLH Trigger: ATGGAGGCCCCGCAGGTAAGCCCTGCCCTCCCATCACCTCTGTCCAGAAACCCTATGGCGGCTATGAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS TCA 72 bp | CCGCTGCTTCCTGACTGGGAGCCACTGCTTCCTGACTaGGAGCCACTGCTTCCTGACTGGGAGCCACTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLLPDWEPLLPD*EPLLPDWEPLL Trigger: AAGCAGTGGCTCCCAGTCAGGAAGCAGTGGCTCTCAGTCAGGAAGCAGTGGCTCCCAGTCAGGAAGCAGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS TCA 72 bp | AGGCCACAGAGCTTGACACCCACGGAGGGGACAGGCTaGGGAGAGCCATTCAGACCACCATTCAACGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPQSLTPTEGTG*GEPFRPPFNGE Trigger: CTCCCCGTTGAATGGTGGTCTGAATGGCTCTCCTCAGCCTGTCCCCTCCGTGGGTGTCAAGCTCTGTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 72 bp | CTGACTGGGAGCCACTGCTTCCTGACTGAGAGCCACTaGTTCCTGACTGGGAGCCACTGCTTCCTGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTGSHCFLTESH*FLTGSHCFLTG Trigger: CCCAGTCAGGAAGCAGTGGCTCCCAGTCAGGAAGCAGTGGCTCTCAGTCAGGAAGCAGTGGCTCCCAGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 72 bp | CAAGATTCCTGGCAGAATAAGACCGGCCATCAGCAATaGCATCAGCCCGTGCCCTCCCACACTCCCCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: QDSWQNKTGHQQ*HQPVPSHTPHP Trigger: CGGATGGGGAGTGTGGGAGGGCACGGGCTGATGGCATTGCTGATGGCCGGTCTTATTCTGCCAGGAATCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 72 bp | CCCCACTGTAGGTCATGCCTGGGACCAGATAACTGTTaGCAGAGCCACCCACCACCTCATAGCCGCCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHCRSCLGPDNC*QSHPPPHSRHR Trigger: CCTATGGCGGCTATGAGGTGGTGGGTGGCTCTGCCAACAGTTATCTGGTCCCAGGCATGACCTACAGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 72 bp | ACTGGGGTCCCAAAGGCTTCACTTGGGTCAGAATGTTaGGGATGGAACGGCAGGGCACTCTTCCAGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TGVPKASLGSEC*GWNGRALFQGC Trigger: ACAGCCCTGGAAGAGTGCCCTGCCGTTCCATCCGCAACATTCTGACCCAAGTGAAGCCTTTGGGACCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 72 bp | CCTGAAGAACTTCCCTGGGAGCTGCTGGATCCACCATaGCTGCTGAAACTGCTGGATCCACCTTGGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PEELPWELLDPP*LLKLLDPPWLL Trigger: CAGCAGCCAAGGTGGATCCAGCAGTTTCAGCAGCCATGGTGGATCCAGCAGCTCCCAGGGAAGTTCTTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CAA 72 bp | GGATCCACCATGGCTGCTGAAACTGCTGGATCCACCTaGGCTGCTGAAGCTGCTGGATCCACCTTGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSTMAAETAGST*AAEAAGSTLAA Trigger: AGCAGCCAAGGTGGATCCAGCAGCTTCAGCAGCCAAGGTGGATCCAGCAGTTTCAGCAGCCATGGTGGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CAA 90 bp | CCTTGGCTGCTGAAGCTGCTGGATCCACCTTGGCTGCTGATGCTGTaGGAGCCAGTCTTTCCAATGAGACAAGGGTCATTCGGGGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PWLLKLLDPPWLLML*EPVFPMRQGSFGEV Trigger: CACCTCCCCGAATGACCCTTGTCTCATTGGAAAGACTGGCTCCAACAGCATCAGCAGCCAAGGTGGATCCAGCAGCTTCAGCAGCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS TCA 72 bp | GAGCTGCTGCTCTGGGAAGTGGACGAGCCTCCAGACTaGGACATGCCTGATGTCTTGTCACCGGTTGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ELLLWEVDEPPD*DMPDVLSPVGR Trigger: TCTACCAACCGGTGACAAGACATCAGGCATGTCTCAGTCTGGAGGCTCGTCCACTTCCCAGAGCAGCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 72 bp | AACTGCTGCTTACCCATCTTCCTGACTGAGAGCCGCTaGTTCCTGACTGGGAGCCACTGCTTCCTGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NCCLPIFLTESR*FLTGSHCFLTE Trigger: CTCAGTCAGGAAGCAGTGGCTCCCAGTCAGGAAGCAGCGGCTCTCAGTCAGGAAGATGGGTAAGCAGCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 72 bp | TGCTCTGGGAAGTGGACGAGCCTCCAGACTGAGACATaGCTGATGTCTTGTCACCGGTTGGTAGAGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CSGKWTSLQTET*LMSCHRLVEQS Trigger: GCTCTGCTCTACCAACCGGTGACAAGACATCAGGCATGTCTCAGTCTGGAGGCTCGTCCACTTCCCAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CAA 72 bp | GGATCCACCTTGGCTGCTGAAGCTGCTGGATCCACCTaGGCTGCTGATGCTGTTGGAGCCAGTCTTTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GSTLAAEAAGST*AADAVGASLSN Trigger: ATTGGAAAGACTGGCTCCAACAGCATCAGCAGCCAAGGTGGATCCAGCAGCTTCAGCAGCCAAGGTGGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CAA 90 bp | GAAACTGCTGGATCCACCTTGGCTGCTGAAGCTGCTGGATCCACCTaGGCTGCTGATGCTGTTGGAGCCAGTCTTTCCAATGAGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ETAGSTLAAEAAGST*AADAVGASLSNETR Trigger: CCTTGTCTCATTGGAAAGACTGGCTCCAACAGCATCAGCAGCCAAGGTGGATCCAGCAGCTTCAGCAGCCAAGGTGGATCCAGCAGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS GCA 72 bp | CGGACTGAGAACTGCTGCTTACCCATTGAGAACTGCTaGTTACCCATCTTCCTGACTGAGAGCCGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RTENCCLPIENC*LPIFLTESRCF Trigger: GAAGCAGCGGCTCTCAGTCAGGAAGATGGGTAAGCAGCAGTTCTCAATGGGTAAGCAGCAGTTCTCAGTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 72 bp | TTGGGATCCATTAACTGGGGTCCCAAAGGCTTCACTTaGGTCAGAATGTTGCGGATGGAACGGCAGGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LGSINWGPKGFT*VRMLRMERQGT Trigger: AGTGCCCTGCCGTTCCATCCGCAACATTCTGACCCAAGTGAAGCCTTTGGGACCCCAGTTAATGGATCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CAA 72 bp | CTGAAGCTGCTGGATCCACCTTGGCTGCTGATGCTGTaGGAGCCAGTCTTTCCAATGAGACAAGGGTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LKLLDPPWLLML*EPVFPMRQGSF Trigger: GAATGACCCTTGTCTCATTGGAAAGACTGGCTCCAACAGCATCAGCAGCCAAGGTGGATCCAGCAGCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 72 bp | CCTGGTTTATATATCAAGGATCCTGAAGAACTTCCCTaGGAGCTGCTGGATCCACCATGGCTGCTGAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: PGLYIKDPEELP*ELLDPPWLLKL Trigger: CAGTTTCAGCAGCCATGGTGGATCCAGCAGCTCCCAGGGAAGTTCTTCAGGATCCTTGATATATAAACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||
| CDS CCA 72 bp | TCTCCCTGTGGCAGAGAAACTTTGGGATCCATTAACTaGGGTCCCAAAGGCTTCACTTGGGTCAGAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPCGRETLGSIN*GPKGFTWVRML Trigger: CAACATTCTGACCCAAGTGAAGCCTTTGGGACCCCAGTTAATGGATCCCAAAGTTTCTCTGCCACAGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044804.8 |
||