Pregenerated sensors for CDS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029330Ensembl transcript IDs: ENSMUST00000031273.9
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTACTCTGAAAGTAGGCGGCCCAGCCAAGGCGGAGCCCAAGAGTaGGGCACCTGCCTGGTGTGGACCGGACCCTGGGTTCTAGCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: CYSESRRPSQGGAQE*GTCLVWTGPWVLAQ Trigger: CTGGGCTAGAACCCAGGGTCCGGTCCACACCAGGCAGGTGCCCCACTCTTGGGCTCCGCCTTGGCTGGGCCGCCTACTTTCAGAGTAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 90 bp | GCTCCCCAGCCACCACCACACACCACTCATCCCTACCATCCCTGGTaGGGTATTTCTGGTGGAGGAGCCTCGTGCTGGGCTCGCCATGCA | + |
|
Preference number: 1 (lower is better) Translates to: APQPPPHTTHPYHPW*GISGGGASCWARHA Trigger: TGCATGGCGAGCCCAGCACGAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGTGGTGGTGGCTGGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 90 bp | ACCACCACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTCTaGTGGAGGAGCCTCGTGCTGGGCTCGCCATGCAGGACCCACTCT | + |
|
Preference number: 1 (lower is better) Translates to: TTTHHSSLPSLVRYF*WRSLVLGSPCRTHS Trigger: AGAGTGGGTCCTGCATGGCGAGCCCAGCACGAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGTGGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 90 bp | GGCTGGCCTGGAGCTGGGTCTTTAGGGAAAACTCTCCTTTCCAGGTaGCTCCCCAGCCACCACCACACACCACTCATCCCTACCATCCCT | + |
|
Preference number: 1 (lower is better) Translates to: GWPGAGSLGKTLLSR*LPSHHHTPLIPTIP Trigger: AGGGATGGTAGGGATGAGTGGTGTGTGGTGGTGGCTGGGGAGCCACCTGGAAAGGAGAGTTTTCCCTAAAGACCCAGCTCCAGGCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 90 bp | GTGGAGGGCCTTCCTGGTTGCCACTCATCCACCACTTCACTCCACTaGATGACGCCTGTTCCAGTGCAAATGGAACGCTGGTCACAGTCG | + |
|
Preference number: 1 (lower is better) Translates to: VEGLPGCHSSTTSLH*MTPVPVQMERWSQS Trigger: CGACTGTGACCAGCGTTCCATTTGCACTGGAACAGGCGTCATCCAGTGGAGTGAAGTGGTGGATGAGTGGCAACCAGGAAGGCCCTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 90 bp | CTCTGCAGCATCTCCATTTCTCCCCCTCCAGGTCGTCTCTGCGGGTaGCCGCGACATTTGGTTAAGTATGGCTGCAGAGCACACACAGCA | + |
|
Preference number: 1 (lower is better) Translates to: LCSISISPPPGRLCG*PRHLVKYGCRAHTA Trigger: TGCTGTGTGTGCTCTGCAGCCATACTTAACCAAATGTCGCGGTCACCCGCAGAGACGACCTGGAGGGGGAGAAATGGAGATGCTGCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 90 bp | AAGGTCGATTTTCCATCGATGGATCTCTGCTGTGGAGGGCCTTCCTaGTTGCCACTCATCCACCACTTCACTCCACTGGATGACGCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: KVDFPSMDLCCGGPS*LPLIHHFTPLDDAC Trigger: ACAGGCGTCATCCAGTGGAGTGAAGTGGTGGATGAGTGGCAACCAGGAAGGCCCTCCACAGCAGAGATCCATCGATGGAAAATCGACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 90 bp | AAGCTACCAGGTCAGACAGCAGTTCAAAGGTCGATTTTCCATCGATaGATCTCTGCTGTGGAGGGCCTTCCTGGTTGCCACTCATCCACC | + |
|
Preference number: 1 (lower is better) Translates to: KLPGQTAVQRSIFHR*ISAVEGLPGCHSST Trigger: GGTGGATGAGTGGCAACCAGGAAGGCCCTCCACAGCAGAGATCCATCGATGGAAAATCGACCTTTGAACTGCTGTCTGACCTGGTAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 90 bp | GCAACTGTCTGTGTGAATCCACAAGGAAGACTAGGGAGAGCGCCCTaGTTCTCAGACATCACCATCCCAAAAGCTACCAGGTCAGACAGC | + |
|
Preference number: 1 (lower is better) Translates to: ATVCVNPQGRLGRAP*FSDITIPKATRSDS Trigger: GCTGTCTGACCTGGTAGCTTTTGGGATGGTGATGTCTGAGAACCAGGGCGCTCTCCCTAGTCTTCCTTGTGGATTCACACAGACAGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 90 bp | GCTGTTTCTGCTGTACTTTTATTCTTGGGTTCAGGAAGTGCAAGGTaGCAGAGGTTAATTACCAGCAGGGGGCTGGCCTGGAGCTGGGTC | + |
|
Preference number: 1 (lower is better) Translates to: AVSAVLLFLGSGSAR*QRLITSRGLAWSWV Trigger: GACCCAGCTCCAGGCCAGCCCCCTGCTGGTAATTAACCTCTGTCACCTTGCACTTCCTGAACCCAAGAATAAAAGTACAGCAGAAACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 90 bp | TCCACACTGTCTCGACCTTTCTTCTCATCAGACCAGGTGTCGCCATaGCCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGGGGCAGCCTT | + |
|
Preference number: 1 (lower is better) Translates to: STLSRPFFSSDQVSP*PLFKVQRDKSGGSL Trigger: AAGGCTGCCCCCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGCGACACCTGGTCTGATGAGAAGAAAGGTCGAGACAGTGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR GCA 90 bp | AGGTCAGACAGCAGTTCAAAGGTCGATTTTCCATCGATGGATCTCTaGTGTGGAGGGCCTTCCTGGTTGCCACTCATCCACCACTTCACT | + |
|
Preference number: 1 (lower is better) Translates to: RSDSSSKVDFPSMDL*CGGPSWLPLIHHFT Trigger: AGTGAAGTGGTGGATGAGTGGCAACCAGGAAGGCCCTCCACAGCAGAGATCCATCGATGGAAAATCGACCTTTGAACTGCTGTCTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 90 bp | AGACAGCAGTTCAAAGGTCGATTTTCCATCGATGGATCTCTGCTGTaGAGGGCCTTCCTGGTTGCCACTCATCCACCACTTCACTCCACT | + |
|
Preference number: 1 (lower is better) Translates to: RQQFKGRFSIDGSLL*RAFLVATHPPLHST Trigger: AGTGGAGTGAAGTGGTGGATGAGTGGCAACCAGGAAGGCCCTCCACAGCAGAGATCCATCGATGGAAAATCGACCTTTGAACTGCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 90 bp | CCAGGTGTCGCCATGACCTCTGTTCAAAGTGCAAAGGGACAAAAGTaGGGGCAGCCTTTAATCTCGGACAGCAACTGTCTGTGTGAATCC | + |
|
Preference number: 1 (lower is better) Translates to: PGVAMTSVQSAKGQK*GQPLISDSNCLCES Trigger: GGATTCACACAGACAGTTGCTGTCCGAGATTAAAGGCTGCCCCCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGCGACACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR GCA 90 bp | CATGGCTGCTGTTTCTGCTGTACTTTTATTCTTGGGTTCAGGAAGTaGAAGGTGACAGAGGTTAATTACCAGCAGGGGGCTGGCCTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: HGCCFCCTFILGFRK*KVTEVNYQQGAGLE Trigger: CTCCAGGCCAGCCCCCTGCTGGTAATTAACCTCTGTCACCTTGCACTTCCTGAACCCAAGAATAAAAGTACAGCAGAAACAGCAGCCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 90 bp | GGCTCGCCATGCAGGACCCACTCTGAGTCTCTTTTGCATCAGAAATaGATTCTGATAACTTCTTTTTCAACAAATCAACAGTGGTCTAAG | + |
|
Preference number: 1 (lower is better) Translates to: GSPCRTHSESLLHQK*ILITSFSTNQQWSK Trigger: CTTAGACCACTGTTGATTTGTTGAAAAAGAAGTTATCAGAATCCATTTCTGATGCAAAAGAGACTCAGAGTGGGTCCTGCATGGCGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | ACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCGGCGGAGCCCAAGAGTaGGGCACCTGCCTGGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: THHSSLPSLVRYFWWRSLGGAQE*GTCLVW Trigger: CCACACCAGGCAGGTGCCCCACTCTTGGGCTCCGCC...GAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR GCA 90 bp | ACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCCCCAGGCTGGCTCAGTaGACGGCTCCAGTCAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: THHSSLPSLVRYFWWRSLPRLAQ*TAPVRA Trigger: AGCTCTGACTGGAGCCGTGCACTGAGCCAGCCTGGG...GAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTCCTCAACCATCCTTTACCTCTGCAGACAGCCTGTTCCTGGACATGCTCCTAAGCAGGGGGCTGGCCTaGAGCTGGGTCTTTAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CPQPSFTSADSLFLDMLLSRGLA*SWVFRE Trigger: TTCCCTAAAGACCCAGCTCCAGGCCAGCCCCCTGCT...TAGGAGCATGTCCAGGAACAGGCTGTCTGCAGAGGTAAAGGATGGTTGAGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR TCA 90 bp | AATTCTGCCTCGCAAGCCATGAGAGCATGGTGGGTAAGGAGAAGCCACCATGTCCCCTACCATCCCTGGTaGGGTATTTCTGGTGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NSASQAMRAWWVRRSHHVPYHPW*GISGGG Trigger: TCCTCCACCAGAAATACCTCACCAGGGATGGTAGGG...GACATGGTGGCTTCTCCTTACCCACCATGCTCTCATGGCTTGCGAGGCAGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTCCTCAACCATCCTTTACCTCTGCAGACAGCCTGTTCCTGGACATGCTCCTATCTCAGGACTGCTACTaGTGCCTGTGGGCTCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CPQPSFTSADSLFLDMLLSQDCY*CLWAPP Trigger: AGGAGGAGCCCACAGGCATCAGTAGCAGTCCTGAGA...TAGGAGCATGTCCAGGAACAGGCTGTCTGCAGAGGTAAAGGATGGTTGAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGATTGACACATATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCGGGTCCGGCCCCACCTaGACAGGGGCAAGGTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LIDTYHKLYSIYIHSAEGGSGPT*TGARCG Trigger: GCCACACCTTGCCCCTGTGCAGGTGGGGCCGGACCC...GCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGATATGTGTCAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | AATTCTGCCTCGCAAGCCATGAGAGCATGGTGGGTAAGGAGAAGCCACCATGTCGGGCTGGCCTGGAGCTaGGTCTTTAGGGAAAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: NSASQAMRAWWVRRSHHVGLAWS*VFRENS Trigger: AGAGTTTTCCCTAAAGACCCAGCTCCAGGCCAGCCC...GACATGGTGGCTTCTCCTTACCCACCATGCTCTCATGGCTTGCGAGGCAGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | ACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCCTAAATCATGGAACCTaGCCAGTGAGGGCAGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: THHSSLPSLVRYFWWRSLLNHGT*PVRAEN Trigger: GTTCTCTGCCCTCACTGGCCAGGTTCCATGATTTAG...GAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGACCAGGTGTCGCCATGACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGGTGAGGTATTTCTGGTaGAGGAGCCTCGTGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: IRPGVAMTSVQSAKGQKWVRYFW*RSLVLG Trigger: GCCCAGCACGAGGCTCCTCCACCAGAAATACCTCAC...CCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGCGACACCTGGTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGGGGCAGCCTTTAATCTCGGACTTACCAGCAGGGGGCTaGCCTGGAGCTGGGTCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: TSVQSAKGQKWGQPLISDLPAGG*PGAGSL Trigger: TAAAGACCCAGCTCCAGGCCAGCCCCCTGCTGGTAA...GTCCGAGATTAAAGGCTGCCCCCACTTTTGTCCCTTTGCACTTTGAACAGAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGACCAGGTGTCGCCATGACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGGGGTCACCAGTCACCTaGGGGCCAACAATGGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: IRPGVAMTSVQSAKGQKWGSPVT*GPTMVF Trigger: GAACACCATTGTTGGCCCCCAGGTGACTGGTGACCC...CCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGCGACACCTGGTCTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGGGGCAGCCTTTAATCTCGGACGATGGATCTCTGCTGTaGAGGGCCTTCCTGGTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: TSVQSAKGQKWGQPLISDDGSLL*RAFLVA Trigger: GGCAACCAGGAAGGCCCTCCACAGCAGAGATCCATC...GTCCGAGATTAAAGGCTGCCCCCACTTTTGTCCCTTTGCACTTTGAACAGAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTCCTCAGAACCCTAGCGCATCCACAGTGGGAAGGAAATATGGGTGATTTCATGCAGGACCCACTCTaGGTCTCTTTTGCATCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLLRTLAHPQWEGNMGDFMQDPL*VSFASE Trigger: TTCTGATGCAAAAGAGACTCAGAGTGGGTCCTGCAT...GAAATCACCCATATTTCCTTCCCACTGTGGATGCGCTAGGGTTCTGAGGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR GCA 90 bp | CACCACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGTCAGCCCTTCAGAAATaGTTGAGATCATTAGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HHTPLIPTIPGEVFLVEESALQK*LRSLEE Trigger: CTCCTCTAATGATCTCAAGCATTTCTGAAGGGCTGA...CTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTCCTCAACCATCCTTTACCTCTGCAGACAGCCTGTTCCTGGACATGCTCCTACTAGCGCATCCACAGTaGGAAGGAAATATGGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: CPQPSFTSADSLFLDMLLLAHPQ*EGNMGD Trigger: ATCACCCATATTTCCTTCCCACTGTGGATGCGCTAG...TAGGAGCATGTCCAGGAACAGGCTGTCTGCAGAGGTAAAGGATGGTTGAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR TCA 90 bp | CACTCATCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCGTGCTGTCAGTTGATAGTGTTTaGCTCTTTAAAACGCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: HSSLPSLVRYFWWRSLVLSVDSV*LFKTQV Trigger: GACTTGCGTTTTAAAGAGTCAAACACTATCAACTGA...CAGCACGAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR GCA 90 bp | AATTCTGCCTCGCAAGCCATGAGAGCATGGTGGGTAAGGAGAAGCCACCATGTCCATGGCTGCTGTTTCTaGTGTACTTTTATTCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NSASQAMRAWWVRRSHHVHGCCF*CTFILG Trigger: CCCAAGAATAAAAGTACAGCAGAAACAGCAGCCATG...GACATGGTGGCTTCTCCTTACCCACCATGCTCTCATGGCTTGCGAGGCAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGATTGACACATATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCAGGATCTTTCACGGGTaGGCGACTGCTGCACTCACC | + |
|
Preference number: 2 (lower is better) Translates to: LIDTYHKLYSIYIHSAEGRIFHG*ATAALT Trigger: GGTGAGTGCAGCAGTCGCCCACCCGTGAAAGATCCT...GCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGATATGTGTCAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | ACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCGAAGAGAGAGAAAAGTaGACAATCGCTCTTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: THHSSLPSLVRYFWWRSLEEREK*TIALFL Trigger: AAGAAAAAGAGCGATTGTCCACTTTTCTCTCTCTTC...GAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTCATCAGACCAGGTGTCGCCATGACCTCTGTTCAAAGTGCAAAGGGACAATTCCTGCTTCATGGCTaGTGTTTCTGCTGTACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLIRPGVAMTSVQSAKGQFLLHG*CFCCTF Trigger: AAAAGTACAGCAGAAACAGCAGCCATGAAGCAGGAA...TTGTCCCTTTGCACTTTGAACAGAGGTCATGGCGACACCTGGTCTGATGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR GCA 90 bp | GCCATGACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGGGGCAGCCTTTAATCATTTGTAGGCTTTCCTaGTTCATGGCTGCTGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: AMTSVQSAKGQKWGQPLIICRLS*FMAAVS Trigger: AGAAACAGCAGCCATGAAGCAGGAAAGCCTACAAAT...GATTAAAGGCTGCCCCCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCATGTCCTCAACCATCCTTTACCTCTGCAGACAGCCTGTTCCTGGACATGCTCTGTACTTTTATTCTTaGGTTCAGGAAGTGCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TMSSTILYLCRQPVPGHALYFYS*VQEVQG Trigger: ACCTTGCACTTCCTGAACCCAAGAATAAAAGTACAG...AGCATGTCCAGGAACAGGCTGTCTGCAGAGGTAAAGGATGGTTGAGGACATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGATTGACACATATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCCCTGCAACTCATTTATaGTCAACATCTGGGGCGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LIDTYHKLYSIYIHSAEGPATHL*STSGAG Trigger: CCCCGCCCCAGATGTTGACCATAAATGAGTTGCAGG...GCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGATATGTGTCAATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CCA 90 bp | ATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCTGATAGACACATACTAGGGAGAGCGCCCTaGTTCTCAGACATCACCATC | + |
|
Preference number: 2 (lower is better) Translates to: IISSTVYISTALRADRHILGRAP*FSDITI Trigger: GATGGTGATGTCTGAGAACCAGGGCGCTCTCCCTAG...TATGTGTCTATCAGCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CAA 90 bp | AGCCTCGTGCTGGGCTCGCCATGCAGGACCCACTCTGAGTCTCTTTaGCATCAGAAATGGATTCTGATAACTTCTTTTTCAACAAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: SLVLGSPCRTHSESL*HQKWILITSFSTNQ Trigger: TTGATTTGTTGAAAAAGAAGTTATCAGAATCCATTTCTGATGCAAAAGAGACTCAGAGTGGGTCCTGCATGGCGAGCCCAGCACGAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGGGGCAGCCTTTAATCTCGGACCCTCCATTTCTTTTGTaGCTGCAACTCATTTATGGT | + |
|
Preference number: 2 (lower is better) Translates to: TSVQSAKGQKWGQPLISDPPFLL*LQLIYG Trigger: ACCATAAATGAGTTGCAGGCACAAAAGAAATGGAGG...GTCCGAGATTAAAGGCTGCCCCCACTTTTGTCCCTTTGCACTTTGAACAGAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR GCA 90 bp | ATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCTGATAGACACATAACCATCCTTTACCTCTaGAGACAGCCTGTTCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: IISSTVYISTALRADRHITILYL*RQPVPG Trigger: TCCAGGAACAGGCTGTCTGCAGAGGTAAAGGATGGT...TATGTGTCTATCAGCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR GCA 90 bp | ATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCTGATAGACACATATTGGTTAAGTATGGCTaGAGAGCACACACAGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: IISSTVYISTALRADRHILVKYG*RAHTAT Trigger: TGTTGCTGTGTGTGCTCTGCAGCCATACTTAACCAA...TATGTGTCTATCAGCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 72 bp | CAGCGCTCCCCTGGCTTGTATGCAGAGGGCGTGGGCTaGATCCAGCGCAGGGTCACCAGTCACCTGGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QRSPGLYAEGVG*IQRRVTSHLGA Trigger: GGCCCCCAGGTGACTGGTGACCCTGCGCTGGATTCAGCCCACGCCCTCTGCATACAAGCCAGGGGAGCGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | GAAAGTAGGCGGCCCAGCCAAGGCGGAGCCCAAGAGTaGGGCACCTGCCTGGTGTGGACCGGACCCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ESRRPSQGGAQE*GTCLVWTGPWV Trigger: AACCCAGGGTCCGGTCCACACCAGGCAGGTGCCCCACTCTTGGGCTCCGCCTTGGCTGGGCCGCCTACTTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 72 bp | CTGGCTCAGTGCACGGCTCCAGTCAGAGCTGGTCTGTaGGCTCCTCCTCAGCAGCCCGTCGTCCTCAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LAQCTAPVRAGL*APPQQPVVLKG Trigger: GCCCTTGAGGACGACGGGCTGCTGAGGAGGAGCTCACAGACCAGCTCTGACTGGAGCCGTGCACTGAGCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | GGTGACAGCGCTCCCCTGGCTTGTATGCAGAGGGCGTaGGCTGAATCCAGCGCAGGGTCACCAGTCACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GDSAPLACMQRA*AESSAGSPVTW Trigger: CCAGGTGACTGGTGACCCTGCGCTGGATTCAGCCCACGCCCTCTGCATACAAGCCAGGGGAGCGCTGTCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | CAAGGCGGAGCCCAAGAGTGGGGCACCTGCCTGGTGTaGACCGGACCCTGGGTTCTAGCCCAGTACCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: QGGAQEWGTCLV*TGPWVLAQYHE Trigger: TTCATGGTACTGGGCTAGAACCCAGGGTCCGGTCCACACCAGGCAGGTGCCCCACTCTTGGGCTCCGCCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | CACTCATCCCTACCATCCCTGGTGAGGTATTTCTGGTaGAGGAGCCTCGTGCTGGGCTCGCCATGCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: HSSLPSLVRYFW*RSLVLGSPCRT Trigger: GGTCCTGCATGGCGAGCCCAGCACGAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 72 bp | CCACCACCACACACCACTCATCCCTACCATCCCTGGTaGGGTATTTCTGGTGGAGGAGCCTCGTGCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPPHTTHPYHPW*GISGGGASCWA Trigger: AGCCCAGCACGAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGTGGTGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 72 bp | CCTGGGGGCCAACAATGGTGTTCTCAGGACTGCTACTaGTGCCTGTGGGCTCCTCCTCAGAACCCTAGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: PGGQQWCSQDCY*CLWAPPQNPSA Trigger: TGCGCTAGGGTTCTGAGGAGGAGCCCACAGGCATCAGTAGCAGTCCTGAGAACACCATTGTTGGCCCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | CCTCGATTCCCAAGGTGCCTCCAGTGCATTCAGCTATaGCTACGCCAGGGCAGCACCAGGGCAAAGGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PRFPRCLQCIQL*LRQGSTRAKVN Trigger: GTTGACCTTTGCCCTGGTGCTGCCCTGGCGTAGCCATAGCTGAATGCACTGGAGGCACCTTGGGAATCGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 72 bp | ATCTCCATTTCTCCCCCTCCAGGTCGTCTCTGCGGGTaGCCGCGACATTTGGTTAAGTATGGCTGCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ISISPPPGRLCG*PRHLVKYGCRA Trigger: TGCTCTGCAGCCATACTTAACCAAATGTCGCGGTCACCCGCAGAGACGACCTGGAGGGGGAGAAATGGAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 72 bp | CTGGTTGCCACTCATCCACCACTTCACTCCACTGGATaGCGCCTGTTCCAGTGCAAATGGAACGCTGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LVATHPPLHSTG*RLFQCKWNAGH Trigger: GTGACCAGCGTTCCATTTGCACTGGAACAGGCGTCATCCAGTGGAGTGAAGTGGTGGATGAGTGGCAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | CAAGAGTGGGGCACCTGCCTGGTGTGGACCGGACCCTaGGTTCTAGCCCAGTACCATGAACAAACAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: QEWGTCLVWTGP*VLAQYHEQTNK Trigger: TTTGTTTGTTTGTTCATGGTACTGGGCTAGAACCCAGGGTCCGGTCCACACCAGGCAGGTGCCCCACTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | CAGAGGTTAATTACCAGCAGGGGGCTGGCCTGGAGCTaGGTCTTTAGGGAAAACTCTCCTTTCCAGGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QRLITSRGLAWS*VFRENSPFQVA Trigger: AGCCACCTGGAAAGGAGAGTTTTCCCTAAAGACCCAGCTCCAGGCCAGCCCCCTGCTGGTAATTAACCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | CTTCCTGGTTGCCACTCATCCACCACTTCACTCCACTaGATGACGCCTGTTCCAGTGCAAATGGAACGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LPGCHSSTTSLH*MTPVPVQMERW Trigger: CCAGCGTTCCATTTGCACTGGAACAGGCGTCATCCAGTGGAGTGAAGTGGTGGATGAGTGGCAACCAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR GCA 72 bp | GGAGAAGCCACCATGTCCTCAACCATCCTTTACCTCTaGAGACAGCCTGTTCCTGGACATGCTCCTACCACA | + |
|
Preference number: 3 (lower is better) Translates to: GEATMSSTILYL*RQPVPGHAPTT Trigger: TGTGGTAGGAGCATGTCCAGGAACAGGCTGTCTGCAGAGGTAAAGGATGGTTGAGGACATGGTGGCTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | TTTCCATCGATGGATCTCTGCTGTGGAGGGCCTTCCTaGTTGCCACTCATCCACCACTTCACTCCACTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: FPSMDLCCGGPS*LPLIHHFTPLD Trigger: ATCCAGTGGAGTGAAGTGGTGGATGAGTGGCAACCAGGAAGGCCCTCCACAGCAGAGATCCATCGATGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR GCA 72 bp | AGCAGTTCAAAGGTCGATTTTCCATCGATGGATCTCTaGTGTGGAGGGCCTTCCTGGTTGCCACTCATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SSSKVDFPSMDL*CGGPSWLPLIH Trigger: GTGGATGAGTGGCAACCAGGAAGGCCCTCCACAGCAGAGATCCATCGATGGAAAATCGACCTTTGAACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | TTCCATAATTCTGCCTCGCAAGCCATGAGAGCATGGTaGGTAAGGAGAAGCCACCATGTCCTCAACCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: FHNSASQAMRAW*VRRSHHVLNHP Trigger: AGGATGGTTGAGGACATGGTGGCTTCTCCTTACCCACCATGCTCTCATGGCTTGCGAGGCAGAATTATGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | GCCATGACCTCTGTTCAAAGTGCAAAGGGACAAAAGTaGGGGCAGCCTTTAATCTCGGACAGCAACTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AMTSVQSAKGQK*GQPLISDSNCL Trigger: CAGACAGTTGCTGTCCGAGATTAAAGGCTGCCCCCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 72 bp | TCTCGACCTTTCTTCTCATCAGACCAGGTGTCGCCATaGCCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SRPFFSSDQVSP*PLFKVQRDKSG Trigger: CCCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGCGACACCTGGTCTGATGAGAAGAAAGGTCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR GCA 72 bp | ATGCTCCTACCACAAGGCTTCCCTCCATTTCTTTTGTaGCTGCAACTCATTTATGGTCAACATCTGGGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: MLLPQGFPPFLL*LQLIYGQHLGR Trigger: CCGCCCCAGATGTTGACCATAAATGAGTTGCAGGCACAAAAGAAATGGAGGGAAGCCTTGTGGTAGGAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR GCA 72 bp | CATCCTTTACCTCTGCAGACAGCCTGTTCCTGGACATaGTCCTACCACAAGGCTTCCCTCCATTTCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HPLPLQTACSWT*SYHKASLHFFC Trigger: ACAAAAGAAATGGAGGGAAGCCTTGTGGTAGGAGCATGTCCAGGAACAGGCTGTCTGCAGAGGTAAAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTCAACCATCCTTTACCTCTGCAGACAGCCTGTTCCTGGACATGCTCCTACTACGAGGGCCTCAGTaGATAGTGTTTGACTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: CPQPSFTSADSLFLDMLLLRGPQ*IVFDSL Trigger: TAAAGAGTCAAACACTATCAACTGAGGCCCTCGTAG...TAGGAGCATGTCCAGGAACAGGCTGTCTGCAGAGGTAAAGGATGGTTGAGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTCTGCCTCGCAAGCCATGAGAGCATGGTGGGTAAGGAGAAGCCACCATGTCCACTCTGAGTCTCTTTaGCATCAGAAATGGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NSASQAMRAWWVRRSHHVHSESL*HQKWIL Trigger: CAGAATCCATTTCTGATGCAAAAGAGACTCAGAGTG...GACATGGTGGCTTCTCCTTACCCACCATGCTCTCATGGCTTGCGAGGCAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTCAACCATCCTTTACCTCTGCAGACAGCCTGTTCCTGGACATGCTCCTAGCTGTACTTTTATTCTaGGGTTCAGGAAGTGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CPQPSFTSADSLFLDMLLAVLLF*GSGSAR Trigger: CCTTGCACTTCCTGAACCCAAGAATAAAAGTACAGC...TAGGAGCATGTCCAGGAACAGGCTGTCTGCAGAGGTAAAGGATGGTTGAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR GCA 72 bp | TGCACAGGGGCAAGGTGTGGCATTTGTAGGCTTTCCTaGTTCATGGCTGCTGTTTCTGCTGTACTTTTATTC | + |
|
Preference number: 3 (lower is better) Translates to: CTGARCGICRLS*FMAAVSAVLLF Trigger: GAATAAAAGTACAGCAGAAACAGCAGCCATGAAGCAGGAAAGCCTACAAATGCCACACCTTGCCCCTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGGGGCAGCCTTTAATCTCGGACTTCCCTCCATTTCTTTaGTGCCTGCAACTCATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: TSVQSAKGQKWGQPLISDFPPFL*CLQLIY Trigger: ATAAATGAGTTGCAGGCACAAAAGAAATGGAGGGAA...GTCCGAGATTAAAGGCTGCCCCCACTTTTGTCCCTTTGCACTTTGAACAGAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR GCA 72 bp | TGTTTCTGCTGTACTTTTATTCTTGGGTTCAGGAAGTaGAAGGTGACAGAGGTTAATTACCAGCAGGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CFCCTFILGFRK*KVTEVNYQQGA Trigger: AGCCCCCTGCTGGTAATTAACCTCTGTCACCTTGCACTTCCTGAACCCAAGAATAAAAGTACAGCAGAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR TCA 72 bp | GGTCAACACCCTACGAGGGCCTCAGTTGATAGTGTTTaGCTCTTTAAAACGCAAGTCTACCTAAATCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: GQHPTRASVDSV*LFKTQVYLNHG Trigger: TCCATGATTTAGGTAGACTTGCGTTTTAAAGAGTCAAACACTATCAACTGAGGCCCTCGTAGGGTGTTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | AAATACATTTTAGAAAAGTACAGGATCTTTCACGGGTaGGCGACTGCTGCACTCACCTTAGACCACGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KYILEKYRIFHG*ATAALTLDHVF Trigger: AAACACGTGGTCTAAGGTGAGTGCAGCAGTCGCCCACCCGTGAAAGATCCTGTACTTTTCTAAAATGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | CTCTTTAAAACGCAAGTCTACCTAAATCATGGAACCTaGCCAGTGAGGGCAGAGAACTTAACATTGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LFKTQVYLNHGT*PVRAENLTLEN Trigger: ATTTTCCAATGTTAAGTTCTCTGCCCTCACTGGCCAGGTTCCATGATTTAGGTAGACTTGCGTTTTAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCTGATAGACACATACAGAAAAAGAAACCTTaGTATCTGCAAAGCCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: IISSTVYISTALRADRHIQKKKP*YLQSLH Trigger: ATGCAGGCTTTGCAGATACAAAGGTTTCTTTTTCTG...TATGTGTCTATCAGCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CCA 72 bp | TGGATTCTGATAACTTCTTTTTCAACAAATCAACAGTaGTCTAAGCACCAGCCTCTAGCTTCTGATTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: WILITSFSTNQQ*SKHQPLASDFE Trigger: TTCAAAATCAGAAGCTAGAGGCTGGTGCTTAGACCACTGTTGATTTGTTGAAAAAGAAGTTATCAGAATCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCGTGCTGGGCTCGCTGTCACGAAGGAGTTaGCGTCGCTTCGGTATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLVRYFWWRSLVLGSLSRRS*RRFGIP Trigger: TGGAATACCGAAGCGACGTCAACTCCTTCGTGACAG...CGAGCCCAGCACGAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR GCA 90 bp | CCTTTCCAGGTGGCTCCCCAGCCACCACCACACACCACTCATCCCTACCATCCCTTTCTTTGTCGCTGGTaGTCTCGGTTTCGTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFQVAPQPPPHTTHPYHPFLCRW*SRFRGH Trigger: GTGACCACGAAACCGAGAGCACCAGCGACAAAGAAA...GGGATGGTAGGGATGAGTGGTGTGTGGTGGTGGCTGGGGAGCCACCTGGAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CAA 72 bp | CCATCGATGGATCTCTGCTGTGGAGGGCCTTCCTGGTaGCCACTCATCCACCACTTCACTCCACTGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSMDLCCGGPSW*PLIHHFTPLDD Trigger: GTCATCCAGTGGAGTGAAGTGGTGGATGAGTGGCAACCAGGAAGGCCCTCCACAGCAGAGATCCATCGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAGTGCATTCAGCTATGGCTACGCCAGGGCAGCACCAGGGCAAAGGTCAACCTGTTTCTTTGTCGCTaGTGCTCTCGGTTTCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQCIQLWLRQGSTRAKVNLFLCR*CSRFRG Trigger: ACCACGAAACCGAGAGCACCAGCGACAAAGAAACAG...GTTGACCTTTGCCCTGGTGCTGCCCTGGCGTAGCCATAGCTGAATGCACTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR TCA 90 bp | AACTATCCTCTGCAGCATCTCCATTTCTCCCCCTCCAGGTCGTCTCTGCGGGTGGGATCCCTTTCTCGGTaGGATGAATCTTCAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NYPLQHLHFSPSRSSLRVGSLSR*DESSGF Trigger: GAACCCTGAAGATTCATCTCACCGAGAAAGGGATCC...CACCCGCAGAGACGACCTGGAGGGGGAGAAATGGAGATGCTGCAGAGGATAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CCA 90 bp | AACTATCCTCTGCAGCATCTCCATTTCTCCCCCTCCAGGTCGTCTCTGCGGGTGAGCACTAACAGCTGCTaGAGCACTTTGCTGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: NYPLQHLHFSPSRSSLRVSTNSC*STLLGF Trigger: GAATCCCAGCAAAGTGCTCCAGCAGCTGTTAGTGCT...CACCCGCAGAGACGACCTGGAGGGGGAGAAATGGAGATGCTGCAGAGGATAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR TCA 90 bp | ACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCAACTGCTGTTCTGGTTaGAGCACTAACAGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: THHSSLPSLVRYFWWRSLNCCSG*STNSCW Trigger: CCAGCAGCTGTTAGTGCTTCAACCAGAACAGCAGTT...GAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR GCA 90 bp | AACTATCCTCTGCAGCATCTCCATTTCTCCCCCTCCAGGTCGTCTCTGCGGGTGAGCACTTCACTTGGATaGCCAGAACCAGAAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NYPLQHLHFSPSRSSLRVSTSLG*PEPEAS Trigger: TGATGCTTCTGGTTCTGGGCATCCAAGTGAAGTGCT...CACCCGCAGAGACGACCTGGAGGGGGAGAAATGGAGATGCTGCAGAGGATAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCAGAACCCTAGCGCATCCACAGTGGGAAGGAAATATGGGTGATTTCACCTTCAAGGTGGGCTaGAGGATCCCTTTCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRTLAHPQWEGNMGDFTFKVG*RIPFSV Trigger: CACCGAGAAAGGGATCCTGCAGCCCACCTTGAAGGT...GAAATCACCCATATTTCCTTCCCACTGTGGATGCGCTAGGGTTCTGAGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCGTGCTGGGCTCGATGACAAGATGTGACTaGGTGACGGTTATCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLVRYFWWRSLVLGSMTRCD*VTVISK Trigger: TTTACTGATAACCGTCACTCAGTCACATCTTGTCAT...CGAGCCCAGCACGAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCCAGCCACCACCACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTTTGGATGACAAGATGTaGCTGAGTGACGGTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHHTPLIPTIPGEVFLDDKM*LSDGYQ Trigger: CTGATAACCGTCACTCAGTCACATCTTGTCATCCAA...AAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGTGGTGGTGGCTGGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR TCA 90 bp | ACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCATTGCAGATGACGCTTaGTATGGGAACAAGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: THHSSLPSLVRYFWWRSLIADDA*YGNKEP Trigger: TGGTTCCTTGTTCCCATATCAAGCGTCATCTGCAAT...GAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCCAGCCACCACCACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTAGAAGAAACCACCAATaGATCCTTCCCAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHHTPLIPTIPGEVFRRNHQ*ILPKSS Trigger: AGAAGACTTGGGAAGGATTCATTGGTGGTTTCTTCT...AAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGTGGTGGTGGCTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCAGAACCCTAGCGCATCCACAGTGGGAAGGAAATATGGGTGATTTCAAACATGCAGAAACCTaGCAGGTAGAGGGCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLRTLAHPQWEGNMGDFKHAET*QVEGEG Trigger: TCCTTCGCCCTCTACCTGGCAGGTTTCTGCATGTTT...GAAATCACCCATATTTCCTTCCCACTGTGGATGCGCTAGGGTTCTGAGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CCA 90 bp | ATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCTGATAGACACATAGTGCTCTCGGTTTCGTaGTCACCGCCGGCCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IISSTVYISTALRADRHIVLSVS*SPPAAS Trigger: AGAGGCGGCCGGCGGTGACCACGAAACCGAGAGCAC...TATGTGTCTATCAGCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR GCA 90 bp | CTCCAGTGCATTCAGCTATGGCTACGCCAGGGCAGCACCAGGGCAAAGGTCAACCAAGGAACCATATCATaGCTTCAAACAGATTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQCIQLWLRQGSTRAKVNQGTIS*LQTDFG Trigger: TCCAAAATCTGTTTGAAGGCATGATATGGTTCCTTG...GTTGACCTTTGCCCTGGTGCTGCCCTGGCGTAGCCATAGCTGAATGCACTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CCA 90 bp | ATCAGACCAGGTGTCGCCATGACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGTGGAAGCACTTCACTTaGATGCCCAGAACCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRPGVAMTSVQSAKGQKWWKHFT*MPRTRS Trigger: GCTTCTGGTTCTGGGCATCCAAGTGAAGTGCTTCCA...CCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGCGACACCTGGTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR GCA 90 bp | ATCAGACCAGGTGTCGCCATGACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGACGTTGAAAGGGCAATaGTGTGTATCTGGAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRPGVAMTSVQSAKGQKWTLKGQ*CVSGRG Trigger: ACCCCTTCCAGATACACAGCATTGCCCTTTCAACGT...CCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGCGACACCTGGTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR GCA 90 bp | ATCAGACCAGGTGTCGCCATGACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGCTGGTGATGTACACGTaGACGAACGTTGCCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IRPGVAMTSVQSAKGQKWLVMYT*TNVAIK Trigger: TTTGATGGCAACGTTCGTGCACGTGTACATCACCAG...CCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGCGACACCTGGTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CAA 72 bp | GACATGCTCCTACCACAAGGCTTCCCTCCATTTCTTTaGTGCCTGCAACTCATTTATGGTCAACATCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DMLLPQGFPPFL*CLQLIYGQHLG Trigger: CCCCAGATGTTGACCATAAATGAGTTGCAGGCACAAAAGAAATGGAGGGAAGCCTTGTGGTAGGAGCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CCA 90 bp | GCCATGACCTCTGTTCAAAGTGCAAAGGGACAAAAGTGGGGGCAGCCTTTAATCCAAAGTACTGGTACTTaGACAACACATAGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AMTSVQSAKGQKWGQPLIQSTGT*TTHRQQ Trigger: TTGCTGCCTATGTGTTGTCCAAGTACCAGTACTTTG...GATTAAAGGCTGCCCCCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| 3UTR CAA 72 bp | CTGGGCTCGCCATGCAGGACCCACTCTGAGTCTCTTTaGCATCAGAAATGGATTCTGATAACTTCTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSPCRTHSESL*HQKWILITSFS Trigger: TGAAAAAGAAGTTATCAGAATCCATTTCTGATGCAAAAGAGACTCAGAGTGGGTCCTGCATGGCGAGCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR TCA 90 bp | ATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCTGATAGACACATACGGTTATCAGTAAAGTaGCGTGCGTCCATGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: IISSTVYISTALRADRHIRLSVK*RASMRT Trigger: TGTTCGCATGGACGCACGTCACTTTACTGATAACCG...TATGTGTCTATCAGCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR TCA 90 bp | ATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCTGATAGACACATAGTTGCCATCAAATACTaGCAGTCAAACCTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IISSTVYISTALRADRHIVAIKY*QSNLSI Trigger: AATGGACAGGTTTGACTGTCAGTATTTGATGGCAAC...TATGTGTCTATCAGCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CCA 90 bp | ATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCTGATAGACACATAATGGTGATGATCTCATaGAAGCACTTCACTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: IISSTVYISTALRADRHIMVMIS*KHFTWM Trigger: CATCCAAGTGAAGTGCTTCCATGAGATCATCACCAT...TATGTGTCTATCAGCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS CCA 90 bp | CTGTCATCAATATCTGTTTCTTTGTCGCTGGTGCTCTCGGTTTCGTaGTCACCGCCGGCCGCCTCTCCCTCGCGGGGTGGCGGCGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSSISVSLSLVLSVS*SPPAASPSRGGGAP Trigger: GGGGGCGCCGCCACCCCGCGAGGGAGAGGCGGCCGGCGGTGACCACGAAACCGAGAGCACCAGCGACAAAGAAACAGATATTGATGACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CAA 90 bp | CCTTTCCAGGTGGCTCCCCAGCCACCACCACACACCACTCATCCCTACCATCCCTCTGTCACGAAGGAGTaGACGTCGCTTCGGTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: PFQVAPQPPPHTTHPYHPSVTKE*TSLRYS Trigger: GGAATACCGAAGCGACGTCAACTCCTTCGTGACAGA...GGGATGGTAGGGATGAGTGGTGTGTGGTGGTGGCTGGGGAGCCACCTGGAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCGTGCTGGGCTCGACACGTGCACGAACGTaGCCATCAAATACTGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPSLVRYFWWRSLVLGSTRART*PSNTDS Trigger: ACTGTCAGTATTTGATGGCAACGTTCGTGCACGTGT...CGAGCCCAGCACGAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CAA 90 bp | CACTCATCCCTACCATCCCTGGTGAGGTATTTCTGGTGGAGGAGCCTCGTGCTGTCAGTGACGCGAACGTaGAAAGGGCAATGCTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HSSLPSLVRYFWWRSLVLSVTRT*KGQCCV Trigger: TACACAGCATTGCCCTTTCAACGTTCGCGTCACTGA...CAGCACGAGGCTCCTCCACCAGAAATACCTCACCAGGGATGGTAGGGATGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS TCA 90 bp | GAAGCTGGAACAGTTCTGAGGGCTCACACTCTGTCACGAAGGAGTTaGCGTCGCTTCGGTATTCCACCGGGCACACAAAGTACTGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: EAGTVLRAHTLSRRS*RRFGIPPGTQSTGT Trigger: AGTACCAGTACTTTGTGTGCCCGGTGGAATACCGAAGCGACGTCAACTCCTTCGTGACAGAGTGTGAGCCCTCAGAACTGTTCCAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS CCA 90 bp | TCCTGTCTGAGGACGGTGGGACCTCAGGCACGTCGGAATCGCCTCTaGCATCGAGATCTCCATACCTGTCATCAATATCTGTTTCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SCLRTVGPQARRNRL*HRDLHTCHQYLFLC Trigger: ACAAAGAAACAGATATTGATGACAGGTATGGAGATCTCGATGCCAGAGGCGATTCCGACGTGCCTGAGGTCCCACCGTCCTCAGACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCTCAGAACCCTAGCGCATCCACAGTGGGAAGGAAATATGGGTGATTTCATGGAAGCACTTCACTaGGATGCCCAGAACCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLRTLAHPQWEGNMGDFMEALH*DAQNQK Trigger: CTTCTGGTTCTGGGCATCCAAGTGAAGTGCTTCCAT...GAAATCACCCATATTTCCTTCCCACTGTGGATGCGCTAGGGTTCTGAGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS GCA 90 bp | ATTCGGACCCCTGATGAAGCTGGTGATGTACACGTGCACGAACGTTaGCATCAAATACTGACAGTCAAACCTGTCCATTATCCCGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: IRTPDEAGDVHVHER*HQILTVKPVHYPAM Trigger: CATGGCGGGATAATGGACAGGTTTGACTGTCAGTATTTGATGGCAACGTTCGTGCACGTGTACATCACCAGCTTCATCAGGGGTCCGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS TCA 90 bp | ATGAAGCTGGTGATGTACACGTGCACGAACGTTGCCATCAAATACTaGCAGTCAAACCTGTCCATTATCCCGCCATGTCCAGGAATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: MKLVMYTCTNVAIKY*QSNLSIIPPCPGIV Trigger: CACGATTCCTGGACATGGCGGGATAATGGACAGGTTTGACTGTCAGTATTTGATGGCAACGTTCGTGCACGTGTACATCACCAGCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CAA 90 bp | CTCCCCAGCCACCACCACACACCACTCATCCCTACCATCCCTGGTGAGGTATTTATTTTGAAAGCTCTTTaGAATCCACTGGCAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPSHHHTPLIPTIPGEVFILKAL*NPLAKK Trigger: CTTCTTTGCCAGTGGATTCAAAAGAGCTTTCAAAAT...AAATACCTCACCAGGGATGGTAGGGATGAGTGGTGTGTGGTGGTGGCTGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS-3UTR CAA 90 bp | ATCATAAGCTCTACAGTATATATATCCACAGCGCTGAGGGCTGATAGACACATATCAATATCTGTTTCTTaGTCGCTGGTGCTCTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IISSTVYISTALRADRHISISVS*SLVLSV Trigger: AACCGAGAGCACCAGCGACAAAGAAACAGATATTGA...TATGTGTCTATCAGCCCTCAGCGCTGTGGATATATATACTGTAGAGCTTATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS CCA 72 bp | ATATCTGTTTCTTTGTCGCTGGTGCTCTCGGTTTCGTaGTCACCGCCGGCCGCCTCTCCCTCGCGGGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ISVSLSLVLSVS*SPPAASPSRGG Trigger: GCCACCCCGCGAGGGAGAGGCGGCCGGCGGTGACCACGAAACCGAGAGCACCAGCGACAAAGAAACAGATAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS TCA 72 bp | GGACAGGGCTTTCTTGAGAATCTCGGGGGTCCTGTCTaGGGACGGTGGGACCTCAGGCACGTCGGAATCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GQGFLENLGGPV*GRWDLRHVGIA Trigger: GGCGATTCCGACGTGCCTGAGGTCCCACCGTCCTCAGACAGGACCCCCGAGATTCTCAAGAAAGCCCTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS CCA 72 bp | AGGACGGTGGGACCTCAGGCACGTCGGAATCGCCTCTaGCATCGAGATCTCCATACCTGTCATCAATATCTG | + |
|
Preference number: 6 (lower is better) Translates to: RTVGPQARRNRL*HRDLHTCHQYL Trigger: CAGATATTGATGACAGGTATGGAGATCTCGATGCCAGAGGCGATTCCGACGTGCCTGAGGTCCCACCGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS TCA 72 bp | ACAGTTCTGAGGGCTCACACTCTGTCACGAAGGAGTTaGCGTCGCTTCGGTATTCCACCGGGCACACAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: TVLRAHTLSRRS*RRFGIPPGTQS Trigger: ACTTTGTGTGCCCGGTGGAATACCGAAGCGACGTCAACTCCTTCGTGACAGAGTGTGAGCCCTCAGAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS CAA 72 bp | AACAGTTCTGAGGGCTCACACTCTGTCACGAAGGAGTaGACGTCGCTTCGGTATTCCACCGGGCACACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NSSEGSHSVTKE*TSLRYSTGHTK Trigger: CTTTGTGTGCCCGGTGGAATACCGAAGCGACGTCAACTCCTTCGTGACAGAGTGTGAGCCCTCAGAACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS TCA 72 bp | GTGATGTACACGTGCACGAACGTTGCCATCAAATACTaGCAGTCAAACCTGTCCATTATCCCGCCATGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VMYTCTNVAIKY*QSNLSIIPPCP Trigger: TGGACATGGCGGGATAATGGACAGGTTTGACTGTCAGTATTTGATGGCAACGTTCGTGCACGTGTACATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS TCA 72 bp | ACACCTTCAAGGTGGGCTGCAGGATCCCTTTCTCGGTaGGATGAATCTTCAGGGTTCTGTAGATATTTAACT | + |
|
Preference number: 6 (lower is better) Translates to: TPSRWAAGSLSR*DESSGFCRYLT Trigger: AGTTAAATATCTACAGAACCCTGAAGATTCATCTCACCGAGAAAGGGATCCTGCAGCCCACCTTGAAGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS GCA 72 bp | CCTGATGAAGCTGGTGATGTACACGTGCACGAACGTTaGCATCAAATACTGACAGTCAAACCTGTCCATTAT | + |
|
Preference number: 6 (lower is better) Translates to: PDEAGDVHVHER*HQILTVKPVHY Trigger: ATAATGGACAGGTTTGACTGTCAGTATTTGATGGCAACGTTCGTGCACGTGTACATCACCAGCTTCATCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||
| CDS TCA 72 bp | AAAAAGATAAGCTGTGATGTCATTGCAGATGACGCTTaGTATGGGAACAAGGAACCATATCATGCCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: KKISCDVIADDA*YGNKEPYHAFK Trigger: TTTGAAGGCATGATATGGTTCCTTGTTCCCATATCAAGCGTCATCTGCAATGACATCACAGCTTATCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031273.9 |
||