Pregenerated sensors for CDPF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064284Ensembl transcript IDs: ENSMUST00000071876.13, ENSMUST00000125947.8, ENSMUST00000134631.8, ENSMUST00000144067.8, ENSMUST00000150995.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGATGTCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTaGAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCC | + |
|
Preference number: 1 (lower is better) Translates to: LMSVLSPGQFLSFRG*RYPPSSKKTGSTAP Trigger: GGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGACATCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 |
||
| 3UTR CCA 90 bp | CCTAGAGCTCCAGCTGGATACACCCCTGATGTCTGTCCTCAGCCCTaGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAGTTC | + |
|
Preference number: 1 (lower is better) Translates to: PRAPAGYTPDVCPQP*PVPQLPRLEVSTQF Trigger: GAACTGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGACATCAGGGGTGTATCCAGCTGGAGCTCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071876.13 ENSMUST00000134631.8 |
||
| 3UTR CCA 90 bp | GTGTCTACCAGCTGTCAATCAAAGGAGGTCCCTCTCCATCTCTCCTaGCCTCCAGAGGCCAGACCTAGAGCTCCAGCTGGATACACCCCT | + |
|
Preference number: 1 (lower is better) Translates to: VSTSCQSKEVPLHLS*PPEARPRAPAGYTP Trigger: AGGGGTGTATCCAGCTGGAGCTCTAGGTCTGGCCTCTGGAGGCCAGGAGAGATGGAGAGGGACCTCCTTTGATTGACAGCTGGTAGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| 3UTR-3UTR TCA 90 bp | TGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAGCCACAGCTCCCAGCCTaGATCCTGGCTGAGCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: CPQPWPVPQLPRLEVSTQPQLPA*ILAEPS Trigger: GCTGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGG...CTGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGTCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCAAGCCTGAATCCTGGCTaGGCCCAGCCCAATGCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: MSVLSPGQFLSFRGWRYPSLNPG*AQPNAS Trigger: CGAAGCATTGGGCTGGGCTCAGCCAGGATTCAGGCT...TGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| 3UTR-3UTR CCA 90 bp | TACAGGGATGTGACGTCACCCTTGCTTACCCTCTGGCCCTCGGAGGCTGAATTCTCCCAGCCTGAATCCTaGCTGAGCCCAGCCCAATGC | + |
|
Preference number: 2 (lower is better) Translates to: YRDVTSPLLTLWPSEAEFSQPES*LSPAQC Trigger: GCATTGGGCTGGGCTCAGCCAGGATTCAGGCTGGGA...GAATTCAGCCTCCGAGGGCCAGAGGGTAAGCAAGGGTGACGTCACATCCCTGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| 3UTR-3UTR TCA 90 bp | AGGTGTCTTCCCACGTGTGCATCTACAGGGAGTGTCTACCAGCTGTCAATCAAAAGCCTGAATCCTGGCTaGGCCCAGCCCAATGCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: RCLPTCASTGSVYQLSIKSLNPG*AQPNAS Trigger: CGAAGCATTGGGCTGGGCTCAGCCAGGATTCAGGCT...TTTGATTGACAGCTGGTAGACACTCCCTGTAGATGCACACGTGGGAAGACACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| 3UTR CAA 90 bp | AGGTTTAAATCATCTCCAAGGAGTTACAGGGATGTGACGTCACCCTaGCTTACCCTCTGGCCCTCGGAGGCTGAATTCCCTAGACAGATA | + |
|
Preference number: 2 (lower is better) Translates to: RFKSSPRSYRDVTSP*LTLWPSEAEFPRQI Trigger: TATCTGTCTAGGGAATTCAGCCTCCGAGGGCCAGAGGGTAAGCAAGGGTGACGTCACATCCCTGTAACTCCTTGGAGATGATTTAAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| 3UTR TCA 72 bp | AAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTaGGCCCAGCCCAATGCTTCGCAGGAGGGCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KTGSTAPSLNPG*AQPNASQEGCA Trigger: GGCACAGCCCTCCTGCGAAGCATTGGGCTGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| 3UTR CCA 72 bp | AAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTaGCTGAGCCCAGCCCAATGCTTCGCAGGAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KEDRVHSSQPES*LSPAQCFAGGL Trigger: CAGCCCTCCTGCGAAGCATTGGGCTGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| 3UTR CCA 72 bp | GTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTaGAGGTATCCACCCAGTTCAAAGAAGACCGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VLSPGQFLSFRG*RYPPSSKKTGS Trigger: GGACCCGGTCTTCTTTGAACTGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| 3UTR CCA 72 bp | CCAGCTGGATACACCCCTGATGTCTGTCCTCAGCCCTaGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCC | + |
|
Preference number: 3 (lower is better) Translates to: PAGYTPDVCPQP*PVPQLPRLEVS Trigger: GGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGACATCAGGGGTGTATCCAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071876.13 ENSMUST00000134631.8 |
||
| 3UTR CCA 72 bp | AGCTGTCAATCAAAGGAGGTCCCTCTCCATCTCTCCTaGCCTCCAGAGGCCAGACCTAGAGCTCCAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SCQSKEVPLHLS*PPEARPRAPAG Trigger: TCCAGCTGGAGCTCTAGGTCTGGCCTCTGGAGGCCAGGAGAGATGGAGAGGGACCTCCTTTGATTGACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| 3UTR CCA 72 bp | AGTTACAGGGATGTGACGTCACCCTTGCTTACCCTCTaGCCCTCGGAGGCTGAATTCCCTAGACAGATAACA | + |
|
Preference number: 3 (lower is better) Translates to: SYRDVTSPLLTL*PSEAEFPRQIT Trigger: TGTTATCTGTCTAGGGAATTCAGCCTCCGAGGGCCAGAGGGTAAGCAAGGGTGACGTCACATCCCTGTAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| 3UTR CCA 72 bp | TTCCCTAGACAGATAACATTGTGTTGTTTGGAAGTCTaGAGAGAAGCTAGGTGTCTTCCCACGTGTGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: FPRQITLCCLEV*REARCLPTCAS Trigger: AGATGCACACGTGGGAAGACACCTAGCTTCTCTCCAGACTTCCAAACAACACAATGTTATCTGTCTAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR GCA 90 bp | TGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAGGCTGGCACTCAAACGTaGCCAGGGGGCGGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPQPWPVPQLPRLEVSTQAGTQT*PGGGAL Trigger: CAGAGCCCCGCCCCCTGGGCACGTTTGAGTGCCAGC...CTGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAGTTCAGCTGGCACTCAAACGTaGCCAGGGGGCGGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPGQFLSFRGWRYPPSSAGTQT*PGGGAL Trigger: CAGAGCCCCGCCCCCTGGGCACGTTTGAGTGCCAGC...TGAACTGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCGCTGGCACTCAAACGTaGCCAGGGGGCGGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQFKEDRVHSSQPESWLSAGTQT*PGGGAL Trigger: CAGAGCCCCGCCCCCTGGGCACGTTTGAGTGCCAGC...GCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAATCCTGGCTGAGCCCAGCCCAATGCTTCGCAGGAGGGCTGTGCCCCTGCTGGAGTAGAACAGGCTaGAGTCCGGGCCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: PESWLSPAQCFAGGLCPCWSRTG*SPGPHT Trigger: TGTGTGTGGGCCCGGACTGCAGCCTGTTCTACTCCA...GCAGGGGCACAGCCCTCCTGCGAAGCATTGGGCTGGGCTCAGCCAGGATTCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCCCAGCCCAATGCAGGAGGACAACAGCCTaGGTGTCTGGGGGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EDRVHSSQPESWLSPAQCRRTTA*VSGGFC Trigger: GCAGAAGCCCCCAGACACCCAGGCTGTTGTCCTCCT...GCATTGGGCTGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCGCTGGCACTCAAACGTaGCCAGGGGGCGGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EVSTQFKEDRVHSSQPESAGTQT*PGGGAL Trigger: CAGAGCCCCGCCCCCTGGGCACGTTTGAGTGCCAGC...GGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCCACACACCAGCCTGCTaGACACACTGCACCGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLSPGQFLSFRGWRYPPHTPAC*THCTES Trigger: GCTCTCGGTGCAGTGTGTGCAGCAGGCTGGTGTGTG...GGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCACACACACCAGCCTGCTaGACACACTGCACCGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSALASSSASEAGGIHPHTPAC*THCTES Trigger: GCTCTCGGTGCAGTGTGTGCAGCAGGCTGGTGTGTG...TGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAAGGAGGACAACAGCCTaGGTGTCTGGGGGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSALASSSASEAGGIHPRRTTA*VSGGFC Trigger: GCAGAAGCCCCCAGACACCCAGGCTGTTGTCCTCCT...TGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAATCCTGGCTGAGCCCAGCCCAATGCTTCGCAGGAGGGCTGTGCCCCTGCGCACTCATGTTCTCCTaGACACAGGGAAGGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PESWLSPAQCFAGGLCPCALMFS*TQGRQT Trigger: GGTCTGCCTTCCCTGTGTCCAGGAGAACATGAGTGC...GCAGGGGCACAGCCCTCCTGCGAAGCATTGGGCTGGGCTCAGCCAGGATTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATGCTGGCACTCAAACGTaGCCAGGGGGCGGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRYPPSSKKTGSTAPSLNAGTQT*PGGGAL Trigger: CAGAGCCCCGCCCCCTGGGCACGTTTGAGTGCCAGC...ATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCAGCCTGCTGCACACACTaGACCGAGAGCCGAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: MSVLSPGQFLSFRGWRYPACCTH*TESRGP Trigger: TGGTCCTCGGCTCTCGGTGCAGTGTGTGCAGCAGGC...TGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCGCCTGCTGCACACACTaGACCGAGAGCCGAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: TQFKEDRVHSSQPESWLSACCTH*TESRGP Trigger: TGGTCCTCGGCTCTCGGTGCAGTGTGTGCAGCAGGC...GCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCCCAGCCTGCTGCACACACTaGACCGAGAGCCGAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: QFKEDRVHSSQPESWLSPACCTH*TESRGP Trigger: TGGTCCTCGGCTCTCGGTGCAGTGTGTGCAGCAGGC...TGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGGAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGCACACACCAGCCTGCTaGACACACTGCACCGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWRYPPSSKKTGSTAPSLHTPAC*THCTES Trigger: GCTCTCGGTGCAGTGTGTGCAGCAGGCTGGTGTGTG...CAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | CGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCCCAGCCCAATGCTTCGCACGAGGACCAGAAACCTaGCCTTGTCTGAGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVHSSQPESWLSPAQCFARGPET*PCLRRR Trigger: CCTTCTCCTCAGACAAGGCCAGGTTTCTGGTCCTCG...TGCGAAGCATTGGGCTGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCCCAGCCCAATGCGCACTCATGTTCTCCTaGACACAGGGAAGGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: EDRVHSSQPESWLSPAQCALMFS*TQGRQT Trigger: GGTCTGCCTTCCCTGTGTCCAGGAGAACATGAGTGC...GCATTGGGCTGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAATCCTGGCTGAGCCCAGCCCAATGCTTCGCAGGAGGGCTGTGCCCCTGCAAACCTGGCCTTGTCTaGGGAGAAGGGGTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PESWLSPAQCFAGGLCPCKPGLV*GEGVFH Trigger: ATGAAAGACCCCTTCTCCTCAGACAAGGCCAGGTTT...GCAGGGGCACAGCCCTCCTGCGAAGCATTGGGCTGGGCTCAGCCAGGATTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | TATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCGCCTGCTGCACACACTaGACCGAGAGCCGAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: YPPSSKKTGSTAPSLNPGACCTH*TESRGP Trigger: TGGTCCTCGGCTCTCGGTGCAGTGTGTGCAGCAGGC...GCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACACACACCAGCCTGCTaGACACACTGCACCGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSVLSPGQFLSFRGWRYPHTPAC*THCTES Trigger: GCTCTCGGTGCAGTGTGTGCAGCAGGCTGGTGTGTG...TGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACTGGAGTAGAACAGGCTaGAGTCCGGGCCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: CLSSALASSSASEAGGIHWSRTG*SPGPHT Trigger: TGTGTGTGGGCCCGGACTGCAGCCTGTTCTACTCCA...GTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCCCAGCCCAATGCGATAAGGCACAAAGCTaGCACTCAAACGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDRVHSSQPESWLSPAQCDKAQS*HSNVPR Trigger: CCTGGGCACGTTTGAGTGCCAGCTTTGTGCCTTATC...GCATTGGGCTGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | CGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCCCAGCCCAATGCTTCGCAGATAAGGCACAAAGCTaGCACTCAAACGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVHSSQPESWLSPAQCFADKAQS*HSNVPR Trigger: CCTGGGCACGTTTGAGTGCCAGCTTTGTGCCTTATC...TGCGAAGCATTGGGCTGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCAAGGAGGACAACAGCCTaGGTGTCTGGGGGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MSVLSPGQFLSFRGWRYPRRTTA*VSGGFC Trigger: GCAGAAGCCCCCAGACACCCAGGCTGTTGTCCTCCT...TGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAGTTCAAAAGGAGGACAACAGCCTaGGTGTCTGGGGGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPWPVPQLPRLEVSTQFKRRTTA*VSGGFC Trigger: GCAGAAGCCCCCAGACACCCAGGCTGTTGTCCTCCT...TTTGAACTGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCGCACTCATGTTCTCCTaGACACAGGGAAGGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SVLSPGQFLSFRGWRYPPALMFS*TQGRQT Trigger: GGTCTGCCTTCCCTGTGTCCAGGAGAACATGAGTGC...GGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | ACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCTGGAGTAGAACAGGCTaGAGTCCGGGCCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: TQFKEDRVHSSQPESWLSWSRTG*SPGPHT Trigger: TGTGTGTGGGCCCGGACTGCAGCCTGTTCTACTCCA...GCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAATCCTGGCTGAGCCCAGCCCAATGCTTCGCAGGAGGGCTGTGCCCCTGCGGTTGGAGTGCTTCTTaGTGGTGCTCTTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PESWLSPAQCFAGGLCPCGWSAS*WCSFSS Trigger: AGAAGAGAAAGAGCACCAGCAAGAAGCACTCCAACC...GCAGGGGCACAGCCCTCCTGCGAAGCATTGGGCTGGGCTCAGCCAGGATTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAGATAAGGCACAAAGCTaGCACTCAAACGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSALASSSASEAGGIHPDKAQS*HSNVPR Trigger: CCTGGGCACGTTTGAGTGCCAGCTTTGTGCCTTATC...TGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCCAGACCTAGAGCTCCAGCTGGATACACCCCTGATGTCTGTCCTCAGCCCCGAGGACCAGAAACCTaGCCTTGTCTGAGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EARPRAPAGYTPDVCPQPRGPET*PCLRRR Trigger: CCTTCTCCTCAGACAAGGCCAGGTTTCTGGTCCTCG...GGGCTGAGGACAGACATCAGGGGTGTATCCAGCTGGAGCTCTAGGTCTGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071876.13 ENSMUST00000134631.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAGTTCACGAGGACCAGAAACCTaGCCTTGTCTGAGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPGQFLSFRGWRYPPSSRGPET*PCLRRR Trigger: CCTTCTCCTCAGACAAGGCCAGGTTTCTGGTCCTCG...TGAACTGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCCAGACCTAGAGCTCCAGCTGGATACACCCCTGATGTCTGTCCTCAGCCCGCACTCATGTTCTCCTaGACACAGGGAAGGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: EARPRAPAGYTPDVCPQPALMFS*TQGRQT Trigger: GGTCTGCCTTCCCTGTGTCCAGGAGAACATGAGTGC...GGGCTGAGGACAGACATCAGGGGTGTATCCAGCTGGAGCTCTAGGTCTGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071876.13 ENSMUST00000134631.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAAAACCTGGCCTTGTCTaGGGAGAAGGGGTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSSALASSSASEAGGIHPKPGLV*GEGVFH Trigger: ATGAAAGACCCCTTCTCCTCAGACAAGGCCAGGTTT...TGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAAACCTGGCCTTGTCTaGGGAGAAGGGGTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLSPGQFLSFRGWRYPPKPGLV*GEGVFH Trigger: ATGAAAGACCCCTTCTCCTCAGACAAGGCCAGGTTT...GGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAGTCCTGCTGGATTTCCTaGGGGAAAGCACTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPQPWPVPQLPRLEVSTQSCWIS*GKALMF Trigger: GAACATGAGTGCTTTCCCTCAGGAAATCCAGCAGGA...CTGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCACACACCAGCCTGCTaGACACACTGCACCGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WRYPPSSKKTGSTAPSLNHTPAC*THCTES Trigger: GCTCTCGGTGCAGTGTGTGCAGCAGGCTGGTGTGTG...ATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | TATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGGAGTAGAACAGGCTaGAGTCCGGGCCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: YPPSSKKTGSTAPSLNPGWSRTG*SPGPHT Trigger: TGTGTGTGGGCCCGGACTGCAGCCTGTTCTACTCCA...GCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | GAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCCCAGCCCAATGCGGTTGGAGTGCTTCTTaGTGGTGCTCTTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EDRVHSSQPESWLSPAQCGWSAS*WCSFSS Trigger: AGAAGAGAAAGAGCACCAGCAAGAAGCACTCCAACC...GCATTGGGCTGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTCCAAGGAGTTACAGGGATGTGACGTCACCCTTGCTTACCCTCTGGCCCAGGAGGACAACAGCCTaGGTGTCTGGGGGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPRSYRDVTSPLLTLWPRRTTA*VSGGFC Trigger: GCAGAAGCCCCCAGACACCCAGGCTGTTGTCCTCCT...GGGCCAGAGGGTAAGCAAGGGTGACGTCACATCCCTGTAACTCCTTGGAGATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR TCA 90 bp | GGCTGGAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAAACCTGGCCTTGTCTaGGGAGAAGGGGTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GWRYPPSSKKTGSTAPSLKPGLV*GEGVFH Trigger: ATGAAAGACCCCTTCTCCTCAGACAAGGCCAGGTTT...CAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCACGTGTGCATCTACAGGGAGTGTCTACCAGCTGTCAATCAAAGGAGGTCGCCTGCTGCACACACTaGACCGAGAGCCGAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: FPRVHLQGVSTSCQSKEVACCTH*TESRGP Trigger: TGGTCCTCGGCTCTCGGTGCAGTGTGTGCAGCAGGC...GACCTCCTTTGATTGACAGCTGGTAGACACTCCCTGTAGATGCACACGTGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR GCA 90 bp | TCATCTCCAAGGAGTTACAGGGATGTGACGTCACCCTTGCTTACCCTCTGGCCCTGGAGTAGAACAGGCTaGAGTCCGGGCCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: SSPRSYRDVTSPLLTLWPWSRTG*SPGPHT Trigger: TGTGTGTGGGCCCGGACTGCAGCCTGTTCTACTCCA...GGGCCAGAGGGTAAGCAAGGGTGACGTCACATCCCTGTAACTCCTTGGAGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR GCA 90 bp | CTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAGGTTGGAGTGCTTCTTaGTGGTGCTCTTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSALASSSASEAGGIHPGWSAS*WCSFSS Trigger: AGAAGAGAAAGAGCACCAGCAAGAAGCACTCCAACC...TGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | TATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCCGAGGACCAGAAACCTaGCCTTGTCTGAGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YPPSSKKTGSTAPSLNPGRGPET*PCLRRR Trigger: CCTTCTCCTCAGACAAGGCCAGGTTTCTGGTCCTCG...GCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCATCCTGCTGGATTTCCTaGGGGAAAGCACTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSVLSPGQFLSFRGWRYPSCWIS*GKALMF Trigger: GAACATGAGTGCTTTCCCTCAGGAAATCCAGCAGGA...TGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCTCCTGCTGGATTTCCTaGGGGAAAGCACTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQFKEDRVHSSQPESWLSSCWIS*GKALMF Trigger: GAACATGAGTGCTTTCCCTCAGGAAATCCAGCAGGA...GCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCGATAAGGCACAAAGCTaGCACTCAAACGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVSTQFKEDRVHSSQPESDKAQS*HSNVPR Trigger: CCTGGGCACGTTTGAGTGCCAGCTTTGTGCCTTATC...GGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| 3UTR CAA 72 bp | TCATCTCCAAGGAGTTACAGGGATGTGACGTCACCCTaGCTTACCCTCTGGCCCTCGGAGGCTGAATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPRSYRDVTSP*LTLWPSEAEFP Trigger: AGGGAATTCAGCCTCCGAGGGCCAGAGGGTAAGCAAGGGTGACGTCACATCCCTGTAACTCCTTGGAGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR TCA 90 bp | TACAGGGATGTGACGTCACCCTTGCTTACCCTCTGGCCCTCGGAGGCTGAATTCTCCTGCTGGATTTCCTaGGGGAAAGCACTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRDVTSPLLTLWPSEAEFSCWIS*GKALMF Trigger: GAACATGAGTGCTTTCCCTCAGGAAATCCAGCAGGA...GAATTCAGCCTCCGAGGGCCAGAGGGTAAGCAAGGGTGACGTCACATCCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGTGTCTACCAGCTGTCAATCAAAGGAGGTCCCTCTCCATCTCTCCTGGGATAAGGCACAAAGCTaGCACTCAAACGTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGVSTSCQSKEVPLHLSWDKAQS*HSNVPR Trigger: CCTGGGCACGTTTGAGTGCCAGCTTTGTGCCTTATC...CCAGGAGAGATGGAGAGGGACCTCCTTTGATTGACAGCTGGTAGACACTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR CCA 90 bp | CGTGTGCATCTACAGGGAGTGTCTACCAGCTGTCAATCAAAGGAGGTCCCTCTCGCACTCATGTTCTCCTaGACACAGGGAAGGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RVHLQGVSTSCQSKEVPLALMFS*TQGRQT Trigger: GGTCTGCCTTCCCTGTGTCCAGGAGAACATGAGTGC...GAGAGGGACCTCCTTTGATTGACAGCTGGTAGACACTCCCTGTAGATGCACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR CCA 90 bp | GGCTGGAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGTGGAGTGCTTCTTGCTaGTGCTCTTTCTCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GWRYPPSSKKTGSTAPSLWSASC*CSFSSL Trigger: TAGAGAAGAGAAAGAGCACCAGCAAGAAGCACTCCA...CAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR TCA 90 bp | AGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTTCCTGCTGGATTTCCTaGGGGAAAGCACTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RYPPSSKKTGSTAPSLNPSCWIS*GKALMF Trigger: GAACATGAGTGCTTTCCCTCAGGAAATCCAGCAGGA...AGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCTTCCCACGTGTGCATCTACAGGGAGTGTCTACCAGCTGTCAATCAAAGGCGAGGACCAGAAACCTaGCCTTGTCTGAGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSSHVCIYRECLPAVNQRRGPET*PCLRRR Trigger: CCTTCTCCTCAGACAAGGCCAGGTTTCTGGTCCTCG...CCTTTGATTGACAGCTGGTAGACACTCCCTGTAGATGCACACGTGGGAAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCTGGAGTGCTTCTTGCTaGTGCTCTTTCTCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TQFKEDRVHSSQPESWLSWSASC*CSFSSL Trigger: TAGAGAAGAGAAAGAGCACCAGCAAGAAGCACTCCA...GCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGAGTGCTTCTTGCTaGTGCTCTTTCTCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: EVSTQFKEDRVHSSQPESWSASC*CSFSSL Trigger: TAGAGAAGAGAAAGAGCACCAGCAAGAAGCACTCCA...GGATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR GCA 90 bp | CGTGTGCATCTACAGGGAGTGTCTACCAGCTGTCAATCAAAGGAGGTCCCTCTCGGTTGGAGTGCTTCTTaGTGGTGCTCTTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVHLQGVSTSCQSKEVPLGWSAS*WCSFSS Trigger: AGAAGAGAAAGAGCACCAGCAAGAAGCACTCCAACC...GAGAGGGACCTCCTTTGATTGACAGCTGGTAGACACTCCCTGTAGATGCACACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR CCA 90 bp | TGGAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGAATTGGAGTGCTTCTTGCTaGTGCTCTTTCTCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: WRYPPSSKKTGSTAPSLNWSASC*CSFSSL Trigger: TAGAGAAGAGAAAGAGCACCAGCAAGAAGCACTCCA...ATTCAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTGCTTACCCTCTGGCCCTCGGAGGCTGAATTCCCTAGACAGATAACATTGTGGAGTGCTTCTTGCTaGTGCTCTTTCTCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLLTLWPSEAEFPRQITLWSASC*CSFSSL Trigger: TAGAGAAGAGAAAGAGCACCAGCAAGAAGCACTCCA...CAATGTTATCTGTCTAGGGAATTCAGCCTCCGAGGGCCAGAGGGTAAGCAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| 3UTR CAA 72 bp | TGGCCCTCGGAGGCTGAATTCCCTAGACAGATAACATaGTGTTGTTTGGAAGTCTGGAGAGAAGCTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WPSEAEFPRQIT*CCLEVWREARC Trigger: ACACCTAGCTTCTCTCCAGACTTCCAAACAACACAATGTTATCTGTCTAGGGAATTCAGCCTCCGAGGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS-3UTR TCA 90 bp | AGGTTTAAATCATCTCCAAGGAGTTACAGGGATGTGACGTCACCCTTGCTTACCAAACCTGGCCTTGTCTaGGGAGAAGGGGTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFKSSPRSYRDVTSPLLTKPGLV*GEGVFH Trigger: ATGAAAGACCCCTTCTCCTCAGACAAGGCCAGGTTT...GGTAAGCAAGGGTGACGTCACATCCCTGTAACTCCTTGGAGATGATTTAAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| 3UTR CAA 72 bp | GAGGCTGAATTCCCTAGACAGATAACATTGTGTTGTTaGGAAGTCTGGAGAGAAGCTAGGTGTCTTCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: EAEFPRQITLCC*EVWREARCLPT Trigger: CGTGGGAAGACACCTAGCTTCTCTCCAGACTTCCAAACAACACAATGTTATCTGTCTAGGGAATTCAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS GCA 90 bp | TGGAGTAGAACAGGCTGCAGTCCGGGCCCACACACACCAGCCTGCTaGACACACTGCACCGAGAGCCGAGGACCAGAAACCTGGCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WSRTGCSPGPHTPAC*THCTESRGPETWPC Trigger: ACAAGGCCAGGTTTCTGGTCCTCGGCTCTCGGTGCAGTGTGTGCAGCAGGCTGGTGTGTGTGGGCCCGGACTGCAGCCTGTTCTACTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CAA 90 bp | GAAGACCGGGTCCACAGCTCCCAGCCTGAATCCTGGCTGAGCCCAGCCCAATGCACCAGAAACCTGGCCTaGTCTGAGGAGAAGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EDRVHSSQPESWLSPAQCTRNLA*SEEKGS Trigger: AGACCCCTTCTCCTCAGACAAGGCCAGGTTTCTGGT...GCATTGGGCTGGGCTCAGCCAGGATTCAGGCTGGGAGCTGTGGACCCGGTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS CCA 90 bp | GGAAAGCACTCATGTTCTCCTGGACACAGGGAAGGCAGACCCTCTTaGAGTAGAACAGGCTGCAGTCCGGGCCCACACACACCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKHSCSPGHREGRPS*SRTGCSPGPHTPAC Trigger: GCAGGCTGGTGTGTGTGGGCCCGGACTGCAGCCTGTTCTACTCCAAGAGGGTCTGCCTTCCCTGTGTCCAGGAGAACATGAGTGCTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCAGACCAGAAACCTGGCCTaGTCTGAGGAGAAGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPQPWPVPQLPRLEVSTQTRNLA*SEEKGS Trigger: AGACCCCTTCTCCTCAGACAAGGCCAGGTTTCTGGT...CTGGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCTCAGCCCTGGCCAGTTCCTCAGCTTCCGAGGCTGGAGGTATCCACCCACCAGAAACCTGGCCTaGTCTGAGGAGAAGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVLSPGQFLSFRGWRYPPTRNLA*SEEKGS Trigger: AGACCCCTTCTCCTCAGACAAGGCCAGGTTTCTGGT...GGGTGGATACCTCCAGCCTCGGAAGCTGAGGAACTGGCCAGGGCTGAGGACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGGAGGTATCCACCCAGTTCAAAGAAGACCGGGTCCACAGCTCCCAGCCTGACCAGAAACCTGGCCTaGTCTGAGGAGAAGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GWRYPPSSKKTGSTAPSLTRNLA*SEEKGS Trigger: AGACCCCTTCTCCTCAGACAAGGCCAGGTTTCTGGT...CAGGCTGGGAGCTGTGGACCCGGTCTTCTTTGAACTGGGTGGATACCTCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS-3UTR CAA 90 bp | TACAGGGAGTGTCTACCAGCTGTCAATCAAAGGAGGTCCCTCTCCATCTCTCCTCGGTTGGAGTGCTTCTaGCTGGTGCTCTTTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YRECLPAVNQRRSLSISPRLECF*LVLFLF Trigger: GAAGAGAAAGAGCACCAGCAAGAAGCACTCCAACCG...AGGAGAGATGGAGAGGGACCTCCTTTGATTGACAGCTGGTAGACACTCCCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071876.13 |
||
| CDS TCA 90 bp | TTCTTGCTGGTGCTCTTTCTCTTCTCTACATCCTGCTGGATTTCCTaGGGGAAAGCACTCATGTTCTCCTGGACACAGGGAAGGCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: FLLVLFLFSTSCWIS*GKALMFSWTQGRQT Trigger: GGTCTGCCTTCCCTGTGTCCAGGAGAACATGAGTGCTTTCCCTCAGGAAATCCAGCAGGATGTAGAGAAGAGAAAGAGCACCAGCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||
| CDS TCA 72 bp | GTGCTCTTTCTCTTCTCTACATCCTGCTGGATTTCCTaGGGGAAAGCACTCATGTTCTCCTGGACACAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VLFLFSTSCWIS*GKALMFSWTQG Trigger: TCCCTGTGTCCAGGAGAACATGAGTGCTTTCCCTCAGGAAATCCAGCAGGATGTAGAGAAGAGAAAGAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071876.13 ENSMUST00000125947.8 ENSMUST00000134631.8 ENSMUST00000144067.8 ENSMUST00000150995.8 |
||