Pregenerated sensors for CDKN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037628Ensembl transcript IDs: ENSMUST00000067426.6, ENSMUST00000227149.2, ENSMUST00000228106.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCCTTCCTTCCCCTGATGCAAGCACAGAGGTAGTCACAAAGGACTaGGCTCGGGTCCTGACACTGGCCAAGGTCCTCGAGCTTGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: ILPSPDASTEVVTKD*ARVLTLAKVLELAF Trigger: GAAAGCAAGCTCGAGGACCTTGGCCAGTGTCAGGACCCGAGCCCAGTCCTTTGTGACTACCTCTGTGCTTGCATCAGGGGAAGGAAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR GCA 90 bp | TGTATCGCCCCAGATCCTCTGACATCTCGAAGGCTGTCTATGGCTTaGTGTGGTGAGATTGAGTCAGACAAGTATAGGAGGAGACAAGCA | + |
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Preference number: 1 (lower is better) Translates to: CIAPDPLTSRRLSMA*CGEIESDKYRRRQA Trigger: TGCTTGTCTCCTCCTATACTTGTCTGACTCAATCTCACCACAGCAAGCCATAGACAGCCTTCGAGATGTCAGAGGATCTGGGGCGATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
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| 3UTR GCA 90 bp | TCTCTCTGCCTTCTGTTTACCTCTCCAACTCTGGGTACAGCACCTTaGACTCAGATCAGCATTGCTGAGTTATCACCAGAAGCAGTACAT | + |
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Preference number: 1 (lower is better) Translates to: SLCLLFTSPTLGTAP*TQISIAELSPEAVH Trigger: ATGTACTGCTTCTGGTGATAACTCAGCAATGCTGATCTGAGTGCAAGGTGCTGTACCCAGAGTTGGAGAGGTAAACAGAAGGCAGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR TCA 90 bp | TTGAAAGACAAGCAAGTGACTTCCTTGCTACTGAAAAGGCTGAGATaGCAAGTTAAGAGACACGACAGACCAGGAGCAATGCCACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LKDKQVTSLLLKRLR*QVKRHDRPGAMPQE Trigger: CTCCTGTGGCATTGCTCCTGGTCTGTCGTGTCTCTTAACTTGTCATCTCAGCCTTTTCAGTAGCAAGGAAGTCACTTGCTTGTCTTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| 3UTR CCA 90 bp | AACTCAAGACTTACTCTCTCTGCCTTCTGTTTACCTCTCCAACTCTaGGTACAGCACCTTGCACTCAGATCAGCATTGCTGAGTTATCAC | + |
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Preference number: 1 (lower is better) Translates to: NSRLTLSAFCLPLQL*VQHLALRSALLSYH Trigger: GTGATAACTCAGCAATGCTGATCTGAGTGCAAGGTGCTGTACCCAGAGTTGGAGAGGTAAACAGAAGGCAGAGAGAGTAAGTCTTGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR CAA 90 bp | GTGCTGGGGTCAGCCTCAGGCCCTCATACCTCAGTGGCAAGCACTTaGCCAACTGATGCTCTTAATAGCCCATTGAAGTCATATTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: VLGSASGPHTSVAST*PTDALNSPLKSYFK Trigger: TTTGAAATATGACTTCAATGGGCTATTAAGAGCATCAGTTGGCAAAGTGCTTGCCACTGAGGTATGAGGGCCTGAGGCTGACCCCAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR-3UTR TCA 90 bp | TCGGGTCCTGACACTGGCCAAGGTCCTCGAGCTTGCTTTCTTTTATCTGTGAGACTGAAAAGGCTGAGATaGCAAGTTAAGAGACACGAC | + |
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Preference number: 2 (lower is better) Translates to: SGPDTGQGPRACFLLSVRLKRLR*QVKRHD Trigger: GTCGTGTCTCTTAACTTGTCATCTCAGCCTTTTCAG...TCTCACAGATAAAAGAAAGCAAGCTCGAGGACCTTGGCCAGTGTCAGGACCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR-3UTR GCA 90 bp | GCACGTGGCAGTGTTTATAAAGGGCTCAGAACACAGGCTGGAGAGAGAAACCTCCAGTGGCAAGCACTTTaGCAACTGATGCTCTTAATA | + |
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Preference number: 2 (lower is better) Translates to: ARGSVYKGLRTQAGERNLQWQAL*QLMLLI Trigger: TATTAAGAGCATCAGTTGGCAAAGTGCTTGCCACTG...GAGGTTTCTCTCTCCAGCCTGTGTTCTGAGCCCTTTATAAACACTGCCACGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCTCGAGCTTGCTTTCTTTTATCTGTGAGATGGTGTTACTAATAGAACCTAGGCTTTTTCATGGGTaGTGGGGTCAGCCTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RSSSLLSFICEMVLLIEPRLFHG*WGQPQA Trigger: GGCCTGAGGCTGACCCCAGCACCCATGAAAAAGCCT...AGGTTCTATTAGTAACACCATCTCACAGATAAAAGAAAGCAAGCTCGAGGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCAAGACTTACTCTCTCTGCCTTCTGTTTACCTCTCCAACTCTGGGTACAGGCTCAGAACACAGGCTaGAGAGAGAAACCTCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: NSRLTLSAFCLPLQLWVQAQNTG*REKPLN Trigger: ATTCAGAGGTTTCTCTCTCCAGCCTGTGTTCTGAGC...CTGTACCCAGAGTTGGAGAGGTAAACAGAAGGCAGAGAGAGTAAGTCTTGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACGATGGTGGCCTCCAATACAGACTATaGTGGAGAACTTGGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: MTQALGGSVQNTYVHDGGLQYRL*WRTWRP Trigger: GGGTCTCCAAGTTCTCCAGCATAGTCTGTATTGGAG...GCCACCATCGTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
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| 3UTR-3UTR GCA 90 bp | GTGACTACTGAACCCCAAACCCTACATCTGAGAAGCGGAACAAGTAGGAATCAATATGGGACTCTACCATaGAAGGCTTTTTCATGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VTTEPQTLHLRSGTSRNQYGTLP*KAFSWV Trigger: CACCCATGAAAAAGCCTTGCATGGTAGAGTCCCATA...TTGATTCCTACTTGTTCCGCTTCTCAGATGTAGGGTTTGGGGTTCAGTAGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGTCAGACAAGTATAGGAGGAGACAAGCAGCTACAAGACAGGATCTTCCAACTGAAAAGGCTGAGATaGCAAGTTAAGAGACACGAC | + |
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Preference number: 2 (lower is better) Translates to: LSQTSIGGDKQLQDRIFQLKRLR*QVKRHD Trigger: GTCGTGTCTCTTAACTTGTCATCTCAGCCTTTTCAG...TTGGAAGATCCTGTCTTGTAGCTGCTTGTCTCCTCCTATACTTGTCTGACTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
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| 3UTR-3UTR GCA 90 bp | TTACAACTCAAGACTTACTCTCTCTGCCTTCTGTTTACCTCTCCAACTCTGGGTACCAGAAGCAGTACATaGTCATTCATGTTGTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LQLKTYSLCLLFTSPTLGTRSST*SFMLSG Trigger: ACCTGACAACATGAATGAGCATGTACTGCTTCTGGT...ACCCAGAGTTGGAGAGGTAAACAGAAGGCAGAGAGAGTAAGTCTTGAGTTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR CCA 72 bp | GGGTGCTGGGGTCAGCCTCAGGCCCTCATACCTCAGTaGCAAGCACTTTGCCAACTGATGCTCTTAATAGCC | + |
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Preference number: 3 (lower is better) Translates to: GCWGQPQALIPQ*QALCQLMLLIA Trigger: GGCTATTAAGAGCATCAGTTGGCAAAGTGCTTGCCACTGAGGTATGAGGGCCTGAGGCTGACCCCAGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR GCA 72 bp | TTTATGGGACTCTACCATGCAAGGCTTTTTCATGGGTaGTGGGGTCAGCCTCAGGCCCTCATACCTCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: FMGLYHARLFHG*WGQPQALIPQW Trigger: CCACTGAGGTATGAGGGCCTGAGGCTGACCCCAGCACCCATGAAAAAGCCTTGCATGGTAGAGTCCCATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGACTGGGCTCGGGTCCTGACACTGGCCAAGGTCCTCGAGCTTGCTTTCTTTTCTGAAATTTTGCCTTaGGGTTACCTCATGATGGGT | + |
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Preference number: 3 (lower is better) Translates to: KDWARVLTLAKVLELAFFSEILP*GYLMMG Trigger: ACCCATCATGAGGTAACCCAAAGGCAAAATTTCAGA...AAAGAAAGCAAGCTCGAGGACCTTGGCCAGTGTCAGGACCCGAGCCCAGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR TCA 72 bp | GAGCAAGTGCCAACATACAATCATCCTTCCTTCCCCTaGTGCAAGCACAGAGGTAGTCACAAAGGACTGGGC | + |
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Preference number: 3 (lower is better) Translates to: EQVPTYNHPSFP*CKHRGSHKGLG Trigger: GCCCAGTCCTTTGTGACTACCTCTGTGCTTGCATCAGGGGAAGGAAGGATGATTGTATGTTGGCACTTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR GCA 72 bp | CCAGATCCTCTGACATCTCGAAGGCTGTCTATGGCTTaGTGTGGTGAGATTGAGTCAGACAAGTATAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: PDPLTSRRLSMA*CGEIESDKYRR Trigger: CCTCCTATACTTGTCTGACTCAATCTCACCACAGCAAGCCATAGACAGCCTTCGAGATGTCAGAGGATCTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
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| 3UTR CCA 72 bp | CTTACTCTCTCTGCCTTCTGTTTACCTCTCCAACTCTaGGTACAGCACCTTGCACTCAGATCAGCATTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LTLSAFCLPLQL*VQHLALRSALL Trigger: CAGCAATGCTGATCTGAGTGCAAGGTGCTGTACCCAGAGTTGGAGAGGTAAACAGAAGGCAGAGAGAGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR CCA 72 bp | AGGAGGATCTGTACAGAACACTTATGTTCACGATGGTaGCAGCACTCGCAGTGTGCTCCAATACAGACTATG | + |
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Preference number: 3 (lower is better) Translates to: RRICTEHLCSRW*QHSQCAPIQTM Trigger: CATAGTCTGTATTGGAGCACACTGCGAGTGCTGCCACCATCGTGAACATAAGTGTTCTGTACAGATCCTCCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
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| 3UTR-3UTR CAA 90 bp | CATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACGATGGTGGACTATGCTGGAGAACTaGGAGACCCTAGATGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: HDSSIRRICTEHLCSRWWTMLEN*ETLDVL Trigger: GAGCACATCTAGGGTCTCCAAGTTCTCCAGCATAGT...CCACCATCGTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
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| 3UTR-3UTR CAA 90 bp | CGAGCTTTTCTGTTTAAGCATCAGGTAGGAAGTTTGGCTGCTGGAACCTGCTTGAAGCAAGTGACTTCCTaGCTACTGAAAAGGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: RAFLFKHQVGSLAAGTCLKQVTS*LLKRLR Trigger: TCTCAGCCTTTTCAGTAGCAAGGAAGTCACTTGCTT...CAAGCAGGTTCCAGCAGCCAAACTTCCTACCTGATGCTTAAACAGAAAAGCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR-3UTR CAA 90 bp | AACTCAAGACTTACTCTCTCTGCCTTCTGTTTACCTCTCCAACTCTGGGTACAGCCAAGGTCCTCGAGCTaGCTTTCTTTTATCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: NSRLTLSAFCLPLQLWVQPRSSS*LSFICE Trigger: CTCACAGATAAAAGAAAGCAAGCTCGAGGACCTTGG...CTGTACCCAGAGTTGGAGAGGTAAACAGAAGGCAGAGAGAGTAAGTCTTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR-3UTR CAA 90 bp | AACTCAAGACTTACTCTCTCTGCCTTCTGTTTACCTCTCCAACTCTGGGTACAGGCACTCAGATCAGCATaGCTGAGTTATCACCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: NSRLTLSAFCLPLQLWVQALRSA*LSYHQK Trigger: CTTCTGGTGATAACTCAGCAATGCTGATCTGAGTGC...CTGTACCCAGAGTTGGAGAGGTAAACAGAAGGCAGAGAGAGTAAGTCTTGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR TCA 72 bp | GTTTGGCTGCTGGAACCTGCTTGGGGTAGAATTTCCTaGGCCTTACTAAACTCAACTGCCTTGATATCTGCA | + |
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Preference number: 3 (lower is better) Translates to: VWLLEPAWGRIS*ALLNSTALISA Trigger: TGCAGATATCAAGGCAGTTGAGTTTAGTAAGGCTCAGGAAATTCTACCCCAAGCAGGTTCCAGCAGCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR TCA 72 bp | GAAGCAGTACATGCTCATTCATGTTGTCAGGTGTTCTaGATTCCTCTAAGGGTCAAAGAGGGCCTTAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: EAVHAHSCCQVF*IPLRVKEGLSD Trigger: GTCACTAAGGCCCTCTTTGACCCTTAGAGGAATTCAGAACACCTGACAACATGAATGAGCATGTACTGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR TCA 72 bp | TGTGAGATGGTGTTACTAATAGAACCTGTATCAGAGTaGGCGTTGCACGTGGCAGTGTTTATAAAGGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: CEMVLLIEPVSE*ALHVAVFIKGS Trigger: TGAGCCCTTTATAAACACTGCCACGTGCAACGCTCACTCTGATACAGGTTCTATTAGTAACACCATCTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTCCTCGAGCTTGCTTTCTTTTATCTGTGAGATGGTGTTACTAATAGAACCTTCAGTGGCAAGCACTTaGCCAACTGATGCTCTTAAT | + |
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Preference number: 3 (lower is better) Translates to: RSSSLLSFICEMVLLIEPSVAST*PTDALN Trigger: ATTAAGAGCATCAGTTGGCAAAGTGCTTGCCACTGA...AGGTTCTATTAGTAACACCATCTCACAGATAAAAGAAAGCAAGCTCGAGGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR TCA 72 bp | CAAGCACTTTGCCAACTGATGCTCTTAATAGCCCATTaGAGTCATATTTCAAAAGACCACTTACTGAATAGG | + |
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Preference number: 3 (lower is better) Translates to: QALCQLMLLIAH*SHISKDHLLNR Trigger: CCTATTCAGTAAGTGGTCTTTTGAAATATGACTTCAATGGGCTATTAAGAGCATCAGTTGGCAAAGTGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| 3UTR GCA 72 bp | TTCCTGAGCCTTACTAAACTCAACTGCCTTGATATCTaGAAAGATACAAGTTGCTTTAGGATCTTTGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: FLSLTKLNCLDI*KDTSCFRIFEK Trigger: TTTTTCAAAGATCCTAAAGCAACTTGTATCTTTGCAGATATCAAGGCAGTTGAGTTTAGTAAGGCTCAGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| CDS-3UTR TCA 90 bp | AAGGACTGGGCTCGGGTCCTGACACTGGCCAAGGTCCTCGAGCTTGCTTTCTTTTGGCCAGCTCCTCCATaGTTTCCCAGCAGCTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: KDWARVLTLAKVLELAFFWPAPP*FPSSCQ Trigger: TTGGCAGCTGCTGGGAAATCATGGAGGAGCTGGCCA...AAAGAAAGCAAGCTCGAGGACCTTGGCCAGTGTCAGGACCCGAGCCCAGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| CDS-3UTR TCA 90 bp | CTGACATCTCGAAGGCTGTCTATGGCTTGCTGTGGTGAGATTGAGTCAGACAAGGCATTGGCTTTGTCCTaGCGGCAGAGGAGGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LTSRRLSMACCGEIESDKALALS*RQRRES Trigger: GCTCTCCCTCCTCTGCCGTCAGGACAAAGCCAATGC...CTTGTCTGACTCAATCTCACCACAGCAAGCCATAGACAGCCTTCGAGATGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
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| CDS-3UTR TCA 90 bp | TGTATCGCCCCAGATCCTCTGACATCTCGAAGGCTGTCTATGGCTTGCTGTGGTTTTTCCGGTTGTTTTTaGGGCAGGTGGCCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CIAPDPLTSRRLSMACCGFSGCF*GRWPAP Trigger: AGGAGCTGGCCACCTGCCTCAAAAACAACCGGAAAA...ACCACAGCAAGCCATAGACAGCCTTCGAGATGTCAGAGGATCTGGGGCGATACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
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| CDS-3UTR GCA 90 bp | AAGGACTGGGCTCGGGTCCTGACACTGGCCAAGGTCCTCGAGCTTGCTTTCTTTACAGCTCCCCTCTGGTaGAGAAAACAAACACGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KDWARVLTLAKVLELAFFTAPLW*RKQTRL Trigger: AAGACGTGTTTGTTTTCTGCACCAGAGGGGAGCTGT...AAAGAAAGCAAGCTCGAGGACCTTGGCCAGTGTCAGGACCCGAGCCCAGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| CDS-3UTR TCA 90 bp | TCGGGTCCTGACACTGGCCAAGGTCCTCGAGCTTGCTTTCTTTTATCTGTGAGATTTTCCGGTTGTTTTTaGGGCAGGTGGCCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGPDTGQGPRACFLLSVRFSGCF*GRWPAP Trigger: AGGAGCTGGCCACCTGCCTCAAAAACAACCGGAAAA...TCTCACAGATAAAAGAAAGCAAGCTCGAGGACCTTGGCCAGTGTCAGGACCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| CDS-3UTR GCA 90 bp | TCGGGTCCTGACACTGGCCAAGGTCCTCGAGCTTGCTTTCTTTTATCTGTGAGAAAACACTCGCAGCTCTaGTTGTGGCCAGTAGTACCC | + |
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Preference number: 4 (lower is better) Translates to: SGPDTGQGPRACFLLSVRKHSQL*LWPVVP Trigger: GGGTACTACTGGCCACAAGCAGAGCTGCGAGTGTTT...TCTCACAGATAAAAGAAAGCAAGCTCGAGGACCTTGGCCAGTGTCAGGACCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| CDS-3UTR CCA 90 bp | TCTGCCTTCTGTTTACCTCTCCAACTCTGGGTACAGCACCTTGCACTCAGATCAGGGAGTCCCTCCATCTaGGATCGGATGATGATGGGT | + |
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Preference number: 4 (lower is better) Translates to: SAFCLPLQLWVQHLALRSGSPSI*DRMMMG Trigger: ACCCATCATCATCCGATCCCAGATGGAGGGACTCCC...TGATCTGAGTGCAAGGTGCTGTACCCAGAGTTGGAGAGGTAAACAGAAGGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| CDS-3UTR CCA 90 bp | TTCATGGGTGCTGGGGTCAGCCTCAGGCCCTCATACCTCAGTGGCAAGCACTTTAGTACCCTTGAAGTGTaGAAGCAGGAAGTTCATGAG | + |
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Preference number: 4 (lower is better) Translates to: FMGAGVSLRPSYLSGKHFSTLEV*KQEVHE Trigger: CTCATGAACTTCCTGCTTCCACACTTCAAGGGTACT...AAAGTGCTTGCCACTGAGGTATGAGGGCCTGAGGCTGACCCCAGCACCCATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGACAAGCAGCTACAAGACAGGATCTTCCAAGTCCTCCGTAACAATGAATTGGCCAGCTCCTCCATaGTTTCCCAGCAGCTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: EETSSYKTGSSKSSVTMNWPAPP*FPSSCQ Trigger: TTGGCAGCTGCTGGGAAATCATGGAGGAGCTGGCCA...ATTCATTGTTACGGAGGACTTGGAAGATCCTGTCTTGTAGCTGCTTGTCTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
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| CDS-3UTR TCA 90 bp | GGTGTTACTAATAGAACCTGTATCAGAGTGAGCGTTGCACGTGGCAGTGTTTATGCATTGGCTTTGTCCTaGCGGCAGAGGAGGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GVTNRTCIRVSVARGSVYALALS*RQRRES Trigger: GCTCTCCCTCCTCTGCCGTCAGGACAAAGCCAATGC...ATAAACACTGCCACGTGCAACGCTCACTCTGATACAGGTTCTATTAGTAACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| CDS-3UTR TCA 90 bp | TCACCCATCCGCCGAGCTTTTCTGTTTAAGCATCAGGTAGGAAGTTTGGCTGCTGAAGCAGGAAGTTCATaGGTGCTTCCTTCCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: SPIRRAFLFKHQVGSLAAEAGSS*VLPSSV Trigger: GACCGAGGAAGGAAGCACTCATGAACTTCCTGCTTC...AGCAGCCAAACTTCCTACCTGATGCTTAAACAGAAAAGCTCGGCGGATGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| CDS-3UTR CCA 90 bp | ATAGGAGGAGACAAGCAGCTACAAGACAGGATCTTCCAAGTCCTCCGTAACAATGGGAGTCCCTCCATCTaGGATCGGATGATGATGGGT | + |
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Preference number: 4 (lower is better) Translates to: IGGDKQLQDRIFQVLRNNGSPSI*DRMMMG Trigger: ACCCATCATCATCCGATCCCAGATGGAGGGACTCCC...ATTGTTACGGAGGACTTGGAAGATCCTGTCTTGTAGCTGCTTGTCTCCTCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTATGGCTTGCTGTGGTGAGATTGAGTCAGACAAGTATAGGAGGAGACAAGGGAGAGCTGCTGTGTaGTACCCAGGGAAGAACGTA | + |
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Preference number: 4 (lower is better) Translates to: LSMACCGEIESDKYRRRQGRAAV*YPGKNV Trigger: TACGTTCTTCCCTGGGTACCACACAGCAGCTCTCCC...TTGTCTCCTCCTATACTTGTCTGACTCAATCTCACCACAGCAAGCCATAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
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| CDS-3UTR TCA 90 bp | ATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACGATGGTGGCTCGCCCCAGATCCTCTaGCATCTCGAAGGCTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: MTQALGGSVQNTYVHDGGSPQIL*HLEGCL Trigger: TAGACAGCCTTCGAGATGTCAGAGGATCTGGGGCGA...GCCACCATCGTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
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| CDS-3UTR GCA 90 bp | TTACAACTCAAGACTTACTCTCTCTGCCTTCTGTTTACCTCTCCAACTCTGGGTGTCCCAGGCCTGTCGTaGTCTTCTCATGCATTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LQLKTYSLCLLFTSPTLGVPGLS*SSHALA Trigger: AGCCAATGCATGAGAAGAGCACGACAGGCCTGGGAC...ACCCAGAGTTGGAGAGGTAAACAGAAGGCAGAGAGAGTAAGTCTTGAGTTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
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| CDS-3UTR CCA 90 bp | TCACCCATCCGCCGAGCTTTTCTGTTTAAGCATCAGGTAGGAAGTTTGGCTGCTTTGACAGCTCCCCTCTaGTGCAGAAAACAAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: SPIRRAFLFKHQVGSLAALTAPL*CRKQTR Trigger: ACGTGTTTGTTTTCTGCACCAGAGGGGAGCTGTCAA...AGCAGCCAAACTTCCTACCTGATGCTTAAACAGAAAAGCTCGGCGGATGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
||
| 3UTR CAA 72 bp | CATCTCGAAGGCTGTCTATGGCTTGCTGTGGTGAGATaGAGTCAGACAAGTATAGGAGGAGACAAGCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HLEGCLWLAVVR*SQTSIGGDKQL Trigger: TAGCTGCTTGTCTCCTCCTATACTTGTCTGACTCAATCTCACCACAGCAAGCCATAGACAGCCTTCGAGATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
||
| CDS-3UTR TCA 90 bp | ACCGAATTCATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACTGGCCAGCTCCTCCATaGTTTCCCAGCAGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TEFMTQALGGSVQNTYVHWPAPP*FPSSCQ Trigger: TTGGCAGCTGCTGGGAAATCATGGAGGAGCTGGCCA...GTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCATGAATTCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR TCA 90 bp | AATACAGACTATGCTGGAGAACTTGGAGACCCTAGATGTGCTCGTTTATTTGGGTTTTCCGGTTGTTTTTaGGGCAGGTGGCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTDYAGELGDPRCARLFGFSGCF*GRWPAP Trigger: AGGAGCTGGCCACCTGCCTCAAAAACAACCGGAAAA...CCCAAATAAACGAGCACATCTAGGGTCTCCAAGTTCTCCAGCATAGTCTGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTTCTGTTTACCTCTCCAACTCTGGGTACAGCACCTTGCACTCAGATCACATAAACCGAGAAACTaGGAACAATTCACTCGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAFCLPLQLWVQHLALRSHKPRN*EQFTRD Trigger: GTCGCGAGTGAATTGTTCCCAGTTTCTCGGTTTATG...TGATCTGAGTGCAAGGTGCTGTACCCAGAGTTGGAGAGGTAAACAGAAGGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
||
| CDS-3UTR CCA 90 bp | GTGACTACTGAACCCCAAACCCTACATCTGAGAAGCGGAACAAGTAGGAATCAAGCTCTTCTCATGCATTaGCTTTGTCCTGACGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTTEPQTLHLRSGTSRNQALLMH*LCPDGR Trigger: TCTGCCGTCAGGACAAAGCCAATGCATGAGAAGAGC...TTGATTCCTACTTGTTCCGCTTCTCAGATGTAGGGTTTGGGGTTCAGTAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
||
| CDS-3UTR CCA 90 bp | TCTATGGCTTGCTGTGGTGAGATTGAGTCAGACAAGTATAGGAGGAGACAAGCAGCTCTTCTCATGCATTaGCTTTGTCCTGACGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMACCGEIESDKYRRRQAALLMH*LCPDGR Trigger: TCTGCCGTCAGGACAAAGCCAATGCATGAGAAGAGC...TGCTTGTCTCCTCCTATACTTGTCTGACTCAATCTCACCACAGCAAGCCATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
||
| CDS-3UTR TCA 90 bp | AAATGGCCTACCACCAAACAGTTCTGCAAAACTACACCTTCCAGGAAAACAACGTGGGACTCTATATTTTaGCAGCTCCCCTCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KWPTTKQFCKTTPSRKTTWDSIF*QLPSGA Trigger: TGCACCAGAGGGGAGCTGTCAAAATATAGAGTCCCA...CGTTGTTTTCCTGGAAGGTGTAGTTTTGCAGAACTGTTTGGTGGTAGGCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGGTGAGATTGAGTCAGACAAGTATAGGAGGAGACAAGCAGCTACAAGAACAGCTCCCCTCTGGTaGAGAAAACAAACACGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCGEIESDKYRRRQAATRTAPLW*RKQTRL Trigger: AAGACGTGTTTGTTTTCTGCACCAGAGGGGAGCTGT...TCTTGTAGCTGCTTGTCTCCTCCTATACTTGTCTGACTCAATCTCACCACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTACAAGACAGGATCTTCCAAGTCCTCCGTAACAATGAATAGGGAATTTAAACACTCGCAGCTCTaGTTGTGGCCAGTAGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: SSYKTGSSKSSVTMNREFKHSQL*LWPVVP Trigger: GGGTACTACTGGCCACAAGCAGAGCTGCGAGTGTTT...AAATTCCCTATTCATTGTTACGGAGGACTTGGAAGATCCTGTCTTGTAGCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCCAATACAGACTATGCTGGAGAACTTGGAGACCCTAGATGTGCTCGTTTATTGACAGCTCCCCTCTaGTGCAGAAAACAAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: CSNTDYAGELGDPRCARLLTAPL*CRKQTR Trigger: ACGTGTTTGTTTTCTGCACCAGAGGGGAGCTGTCAA...TAAACGAGCACATCTAGGGTCTCCAAGTTCTCCAGCATAGTCTGTATTGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR CCA 90 bp | TTCATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACGATGGTGGGAGTCCCTCCATCTaGGATCGGATGATGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FMTQALGGSVQNTYVHDGGSPSI*DRMMMG Trigger: ACCCATCATCATCCGATCCCAGATGGAGGGACTCCC...ACCATCGTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR CCA 90 bp | TTTGAAAGACAAGCAAGTGACTTCCTTGCTACTGAAAAGGCTGAGATGACAAGTGGGAGAGCTGCTGTGTaGTACCCAGGGAAGAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: FERQASDFLATEKAEMTSGRAAV*YPGKNV Trigger: TACGTTCTTCCCTGGGTACCACACAGCAGCTCTCCC...ACTTGTCATCTCAGCCTTTTCAGTAGCAAGGAAGTCACTTGCTTGTCTTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
||
| 3UTR CAA 72 bp | TCGCAGTGTGCTCCAATACAGACTATGCTGGAGAACTaGGAGACCCTAGATGTGCTCGTTTATTTGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SQCAPIQTMLEN*ETLDVLVYLGS Trigger: AGATCCCAAATAAACGAGCACATCTAGGGTCTCCAAGTTCTCCAGCATAGTCTGTATTGGAGCACACTGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTTCTGTTTACCTCTCCAACTCTGGGTACAGCACCTTGCACTCAGATCAGGTAGCCATGAAATTTaGATTGGAGTCTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAFCLPLQLWVQHLALRSGSHEI*IGVCSS Trigger: TGAAGAACAGACTCCAATTCAAATTTCATGGCTACC...TGATCTGAGTGCAAGGTGCTGTACCCAGAGTTGGAGAGGTAAACAGAAGGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAAGACAAGCAAGTGACTTCCTTGCTACTGAAAAGGCTGAGATGACAAGTGAAGCAGGAAGTTCATaGGTGCTTCCTTCCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FERQASDFLATEKAEMTSEAGSS*VLPSSV Trigger: GACCGAGGAAGGAAGCACTCATGAACTTCCTGCTTC...ACTTGTCATCTCAGCCTTTTCAGTAGCAAGGAAGTCACTTGCTTGTCTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
||
| CDS-3UTR GCA 90 bp | ATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACGATGGTGGCACAGCTCCCCTCTGGTaGAGAAAACAAACACGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MTQALGGSVQNTYVHDGGTAPLW*RKQTRL Trigger: AAGACGTGTTTGTTTTCTGCACCAGAGGGGAGCTGT...GCCACCATCGTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR CCA 90 bp | CTGTCTATGGCTTGCTGTGGTGAGATTGAGTCAGACAAGTATAGGAGGAGACAACATAAACCGAGAAACTaGGAACAATTCACTCGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSMACCGEIESDKYRRRQHKPRN*EQFTRD Trigger: GTCGCGAGTGAATTGTTCCCAGTTTCTCGGTTTATG...TTGTCTCCTCCTATACTTGTCTGACTCAATCTCACCACAGCAAGCCATAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
||
| CDS-3UTR TCA 90 bp | ACCGAATTCATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACTGGGACTCTATATTTTaGCAGCTCCCCTCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEFMTQALGGSVQNTYVHWDSIF*QLPSGA Trigger: TGCACCAGAGGGGAGCTGTCAAAATATAGAGTCCCA...GTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCATGAATTCGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAATACAGACTATGCTGGAGAACTTGGAGACCCTAGATGTGCTCGTTTATCGGATGATGATGGGTaGCAATTCCATATTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSNTDYAGELGDPRCARLSDDDG*QFHIVG Trigger: ACCAACAATATGGAATTGTCACCCATCATCATCCGA...TAAACGAGCACATCTAGGGTCTCCAAGTTCTCCAGCATAGTCTGTATTGGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR TCA 90 bp | CTGTCTATGGCTTGCTGTGGTGAGATTGAGTCAGACAAGTATAGGAGGAGACAATCGGATGATGATGGGTaGCAATTCCATATTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSMACCGEIESDKYRRRQSDDDG*QFHIVG Trigger: ACCAACAATATGGAATTGTCACCCATCATCATCCGA...TTGTCTCCTCCTATACTTGTCTGACTCAATCTCACCACAGCAAGCCATAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
||
| CDS-3UTR TCA 90 bp | GGTGAGATTGAGTCAGACAAGTATAGGAGGAGACAAGCAGCTACAAGACAGGATGGTAGCCATGAAATTTaGATTGGAGTCTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GEIESDKYRRRQAATRQDGSHEI*IGVCSS Trigger: TGAAGAACAGACTCCAATTCAAATTTCATGGCTACC...ATCCTGTCTTGTAGCTGCTTGTCTCCTCCTATACTTGTCTGACTCAATCTCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
||
| CDS-3UTR TCA 90 bp | GGTGTTACTAATAGAACCTGTATCAGAGTGAGCGTTGCACGTGGCAGTGTTTATTCGGATGATGATGGGTaGCAATTCCATATTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVTNRTCIRVSVARGSVYSDDDG*QFHIVG Trigger: ACCAACAATATGGAATTGTCACCCATCATCATCCGA...ATAAACACTGCCACGTGCAACGCTCACTCTGATACAGGTTCTATTAGTAACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
||
| CDS-3UTR GCA 90 bp | AACACCGAATTCATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTAGGCTGTCTATGGCTTaGTGTGGTGAGATTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTEFMTQALGGSVQNTYVRLSMA*CGEIES Trigger: TGACTCAATCTCACCACAGCAAGCCATAGACAGCCT...AACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCATGAATTCGGTGTT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
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| CDS-3UTR CCA 90 bp | TTCATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACGATGGTCATAAACCGAGAAACTaGGAACAATTCACTCGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: FMTQALGGSVQNTYVHDGHKPRN*EQFTRD Trigger: GTCGCGAGTGAATTGTTCCCAGTTTCTCGGTTTATG...ACCATCGTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR CCA 90 bp | TTTGAAAGACAAGCAAGTGACTTCCTTGCTACTGAAAAGGCTGAGATGACAAGTAGTACCCTTGAAGTGTaGAAGCAGGAAGTTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FERQASDFLATEKAEMTSSTLEV*KQEVHE Trigger: CTCATGAACTTCCTGCTTCCACACTTCAAGGGTACT...ACTTGTCATCTCAGCCTTTTCAGTAGCAAGGAAGTCACTTGCTTGTCTTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS-3UTR TCA 90 bp | CGAATTCATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACGAGGTAGCCATGAAATTTaGATTGGAGTCTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RIHDSSIRRICTEHLCSRGSHEI*IGVCSS Trigger: TGAAGAACAGACTCCAATTCAAATTTCATGGCTACC...TCGTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCATGAATTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
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| CDS TCA 90 bp | TCGGTCCCAGGCCTGTCGTGCTCTTCTCATGCATTGGCTTTGTCCTaGCGGCAGAGGAGGGAGAGCTGCTGTGTGGTACCCAGGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVPGLSCSSHALALS*RQRRESCCVVPREE Trigger: TTCTTCCCTGGGTACCACACAGCAGCTCTCCCTCCTCTGCCGTCAGGACAAAGCCAATGCATGAGAAGAGCACGACAGGCCTGGGACCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS GCA 90 bp | ATGAGTGCTTCCTTCCTCGGTCCCAGGCCTGTCGTGCTCTTCTCATaGATTGGCTTTGTCCTGACGGCAGAGGAGGGAGAGCTGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: MSASFLGPRPVVLFS*IGFVLTAEEGELLC Trigger: ACACAGCAGCTCTCCCTCCTCTGCCGTCAGGACAAAGCCAATGCATGAGAAGAGCACGACAGGCCTGGGACCGAGGAAGGAAGCACTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS-3UTR CAA 90 bp | AAGGACTGGGCTCGGGTCCTGACACTGGCCAAGGTCCTCGAGCTTGCTTTCTTTTTGGGACTCTATATTTaGACAGCTCCCCTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KDWARVLTLAKVLELAFFLGLYI*TAPLWC Trigger: GCACCAGAGGGGAGCTGTCAAAATATAGAGTCCCAA...AAAGAAAGCAAGCTCGAGGACCTTGGCCAGTGTCAGGACCCGAGCCCAGTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
||
| CDS-3UTR CAA 90 bp | CATGGGTGCTGGGGTCAGCCTCAGGCCCTCATACCTCAGTGGCAAGCACTTTGCAAGAATCAAACTCACTaGCTTGTATTGAAATGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HGCWGQPQALIPQWQALCKNQTH*LVLKWA Trigger: CGCCCATTTCAATACAAGCAAGTGAGTTTGATTCTT...GCAAAGTGCTTGCCACTGAGGTATGAGGGCCTGAGGCTGACCCCAGCACCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
||
| CDS TCA 90 bp | TGCCAATGTCGGGAGTCCCTCCATCTGGGATCGGATGATGATGGGTaGCAATTCCATATTGTTGGTAGAGGTCCAGAAGGTTTGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: CQCRESLHLGSDDDG*QFHIVGRGPEGLGL Trigger: GAGTCCCAAACCTTCTGGACCTCTACCAACAATATGGAATTGTCACCCATCATCATCCGATCCCAGATGGAGGGACTCCCGACATTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067426.6 ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CCA 90 bp | CTCCATGATTTCCCAGCAGCTGCCAATGTCGGGAGTCCCTCCATCTaGGATCGGATGATGATGGGTGACAATTCCATATTGTTGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHDFPAAANVGSPSI*DRMMMGDNSILLVE Trigger: CTCTACCAACAATATGGAATTGTCACCCATCATCATCCGATCCCAGATGGAGGGACTCCCGACATTGGCAGCTGCTGGGAAATCATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067426.6 ENSMUST00000227149.2 ENSMUST00000228106.2 |
||
| CDS-3UTR CAA 90 bp | TACCATGCAAGGCTTTTTCATGGGTGCTGGGGTCAGCCTCAGGCCCTCATACCTGCCATGAAATTTGAATaGGAGTCTGTTCTTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: YHARLFHGCWGQPQALIPAMKFE*ESVLHQ Trigger: TTGATGAAGAACAGACTCCAATTCAAATTTCATGGC...AGGTATGAGGGCCTGAGGCTGACCCCAGCACCCATGAAAAAGCCTTGCATGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
||
| CDS-3UTR CAA 90 bp | GGTGAGATTGAGTCAGACAAGTATAGGAGGAGACAAGCAGCTACAAGACAGGATTTGGGACTCTATATTTaGACAGCTCCCCTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GEIESDKYRRRQAATRQDLGLYI*TAPLWC Trigger: GCACCAGAGGGGAGCTGTCAAAATATAGAGTCCCAA...ATCCTGTCTTGTAGCTGCTTGTCTCCTCCTATACTTGTCTGACTCAATCTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTGGTGAGATTGAGTCAGACAAGTATAGGAGGAGACAAGCAGCTACAAGACAAGAATCAAACTCACTaGCTTGTATTGAAATGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AVVRLSQTSIGGDKQLQDKNQTH*LVLKWA Trigger: CGCCCATTTCAATACAAGCAAGTGAGTTTGATTCTT...GTCTTGTAGCTGCTTGTCTCCTCCTATACTTGTCTGACTCAATCTCACCACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
||
| CDS-3UTR CAA 90 bp | ACCGAATTCATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACTTGGGACTCTATATTTaGACAGCTCCCCTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TEFMTQALGGSVQNTYVHLGLYI*TAPLWC Trigger: GCACCAGAGGGGAGCTGTCAAAATATAGAGTCCCAA...GTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCATGAATTCGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR CAA 90 bp | GACTATGCTGGAGAACTTGGAGACCCTAGATGTGCTCGTTTATTTGGGATCTTCGACAATTCCATATTGTaGGTAGAGGTCCAGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DYAGELGDPRCARLFGIFDNSIL*VEVQKV Trigger: AACCTTCTGGACCTCTACCAACAATATGGAATTGTC...GAAGATCCCAAATAAACGAGCACATCTAGGGTCTCCAAGTTCTCCAGCATAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR CAA 90 bp | AAATGGCCTACCACCAAACAGTTCTGCAAAACTACACCTTCCAGGAAAACAACGGACAATTCCATATTGTaGGTAGAGGTCCAGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KWPTTKQFCKTTPSRKTTDNSIL*VEVQKV Trigger: AACCTTCTGGACCTCTACCAACAATATGGAATTGTC...CGTTGTTTTCCTGGAAGGTGTAGTTTTGCAGAACTGTTTGGTGGTAGGCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227149.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCCAATACAGACTATGCTGGAGAACTTGGAGACCCTAGATGTGCTCGTTTAATCTGGACACAGATCTaGATAGTGAATCTCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CSNTDYAGELGDPRCARLIWTQI*IVNLLM Trigger: CATCAAGAGATTCACTATCAAGATCTGTGTCCAGAT...TAAACGAGCACATCTAGGGTCTCCAAGTTCTCCAGCATAGTCTGTATTGGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR CAA 90 bp | ATGACTCAAGCATTAGGAGGATCTGTACAGAACACTTATGTTCACGATGGTGGCAAGAATCAAACTCACTaGCTTGTATTGAAATGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MTQALGGSVQNTYVHDGGKNQTH*LVLKWA Trigger: CGCCCATTTCAATACAAGCAAGTGAGTTTGATTCTT...GCCACCATCGTGAACATAAGTGTTCTGTACAGATCCTCCTAATGCTTGAGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR CAA 90 bp | GACTATGCTGGAGAACTTGGAGACCCTAGATGTGCTCGTTTATTTGGGATCTTCGCCATGAAATTTGAATaGGAGTCTGTTCTTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: DYAGELGDPRCARLFGIFAMKFE*ESVLHQ Trigger: TTGATGAAGAACAGACTCCAATTCAAATTTCATGGC...GAAGATCCCAAATAAACGAGCACATCTAGGGTCTCCAAGTTCTCCAGCATAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
||
| CDS-3UTR CAA 90 bp | AGCAGCTACAAGACAGGATCTTCCAAGTCCTCCGTAACAATGAATAGGGAATTTGACAATTCCATATTGTaGGTAGAGGTCCAGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSYKTGSSKSSVTMNREFDNSIL*VEVQKV Trigger: AACCTTCTGGACCTCTACCAACAATATGGAATTGTC...AAATTCCCTATTCATTGTTACGGAGGACTTGGAAGATCCTGTCTTGTAGCTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228106.2 |
||
| CDS CCA 72 bp | CCTCGGTCCCAGGCCTGTCGTGCTCTTCTCATGCATTaGCTTTGTCCTGACGGCAGAGGAGGGAGAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRSQACRALLMH*LCPDGRGGRAA Trigger: AGCAGCTCTCCCTCCTCTGCCGTCAGGACAAAGCCAATGCATGAGAAGAGCACGACAGGCCTGGGACCGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
||
| CDS TCA 72 bp | GGCCTGTCGTGCTCTTCTCATGCATTGGCTTTGTCCTaGCGGCAGAGGAGGGAGAGCTGCTGTGTGGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: GLSCSSHALALS*RQRRESCCVVP Trigger: GGGTACCACACAGCAGCTCTCCCTCCTCTGCCGTCAGGACAAAGCCAATGCATGAGAAGAGCACGACAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
||
| CDS GCA 72 bp | TCCTTCCTCGGTCCCAGGCCTGTCGTGCTCTTCTCATaGATTGGCTTTGTCCTGACGGCAGAGGAGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SFLGPRPVVLFS*IGFVLTAEEGE Trigger: CTCTCCCTCCTCTGCCGTCAGGACAAAGCCAATGCATGAGAAGAGCACGACAGGCCTGGGACCGAGGAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CAA 90 bp | GGTACCCAGGGAAGAACGTACTGTATCAGGGTTTTCCGGTTGTTTTaGAGGCAGGTGGCCAGCTCCTCCATGATTTCCCAGCAGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GTQGRTYCIRVFRLF*RQVASSSMISQQLP Trigger: TGGCAGCTGCTGGGAAATCATGGAGGAGCTGGCCACCTGCCTCAAAAACAACCGGAAAACCCTGATACAGTACGTTCTTCCCTGGGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS GCA 72 bp | AGTACCCTTGAAGTGTGGAAGCAGGAAGTTCATGAGTaGTTCCTTCCTCGGTCCCAGGCCTGTCGTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: STLEVWKQEVHE*FLPRSQACRAL Trigger: AAGAGCACGACAGGCCTGGGACCGAGGAAGGAAGCACTCATGAACTTCCTGCTTCCACACTTCAAGGGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CCA 72 bp | CTTTGTCCTGACGGCAGAGGAGGGAGAGCTGCTGTGTaGTACCCAGGGAAGAACGTACTGTATCAGGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LCPDGRGGRAAV*YPGKNVLYQGF Trigger: AAAACCCTGATACAGTACGTTCTTCCCTGGGTACCACACAGCAGCTCTCCCTCCTCTGCCGTCAGGACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CCA 72 bp | GCAGCTCTGCTTGTGGCCAGTAGTACCCTTGAAGTGTaGAAGCAGGAAGTTCATGAGTGCTTCCTTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: AALLVASSTLEV*KQEVHECFLPR Trigger: CCGAGGAAGGAAGCACTCATGAACTTCCTGCTTCCACACTTCAAGGGTACTACTGGCCACAAGCAGAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CAA 90 bp | CTGTGTGGTACCCAGGGAAGAACGTACTGTATCAGGGTTTTCCGGTaGTTTTTGAGGCAGGTGGCCAGCTCCTCCATGATTTCCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LCGTQGRTYCIRVFR*FLRQVASSSMISQQ Trigger: CTGCTGGGAAATCATGGAGGAGCTGGCCACCTGCCTCAAAAACAACCGGAAAACCCTGATACAGTACGTTCTTCCCTGGGTACCACACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CCA 72 bp | TTCCCAGCAGCTGCCAATGTCGGGAGTCCCTCCATCTaGGATCGGATGATGATGGGTGACAATTCCATATTG | + |
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Preference number: 6 (lower is better) Translates to: FPAAANVGSPSI*DRMMMGDNSIL Trigger: CAATATGGAATTGTCACCCATCATCATCCGATCCCAGATGGAGGGACTCCCGACATTGGCAGCTGCTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067426.6 ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS TCA 72 bp | CGGGAGTCCCTCCATCTGGGATCGGATGATGATGGGTaGCAATTCCATATTGTTGGTAGAGGTCCAGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: RESLHLGSDDDG*QFHIVGRGPEG Trigger: ACCTTCTGGACCTCTACCAACAATATGGAATTGTCACCCATCATCATCCGATCCCAGATGGAGGGACTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067426.6 ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CAA 72 bp | GGAAGAACGTACTGTATCAGGGTTTTCCGGTTGTTTTaGAGGCAGGTGGCCAGCTCCTCCATGATTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GRTYCIRVFRLF*RQVASSSMISQ Trigger: CTGGGAAATCATGGAGGAGCTGGCCACCTGCCTCAAAAACAACCGGAAAACCCTGATACAGTACGTTCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CAA 72 bp | AAACACTCGCAGCTCTGCTTGTGGCCAGTAGTACCCTaGAAGTGTGGAAGCAGGAAGTTCATGAGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: KHSQLCLWPVVP*KCGSRKFMSAS Trigger: GGAAGCACTCATGAACTTCCTGCTTCCACACTTCAAGGGTACTACTGGCCACAAGCAGAGCTGCGAGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CAA 72 bp | CATCTCGAAGGCTGTCTATGGCTTGCTGTGGTGAGATaGAGTCAGACAAGTATAGGAGGAGACAAGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: HLEGCLWLAVVR*SQTSIGGDKQQ Trigger: TTGCTGCTTGTCTCCTCCTATACTTGTCTGACTCAATCTCACCACAGCAAGCCATAGACAGCCTTCGAGATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067426.6 |
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| CDS CAA 72 bp | GTTGGTAGAGGTCCAGAAGGTTTGGGACTCTATATTTaGACAGCTCCCCTCTGGTGCAGAAAACAAACACGT | + |
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Preference number: 6 (lower is better) Translates to: VGRGPEGLGLYI*TAPLWCRKQTR Trigger: ACGTGTTTGTTTTCTGCACCAGAGGGGAGCTGTCAAAATATAGAGTCCCAAACCTTCTGGACCTCTACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067426.6 ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CAA 90 bp | TTCCATATTGTTGGTAGAGGTCCAGAAGGTTTGGGACTCTATATTTaGACAGCTCCCCTCTGGTGCAGAAAACAAACACGTCTTGGATCC | + |
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Preference number: 6 (lower is better) Translates to: FHIVGRGPEGLGLYI*TAPLWCRKQTRLGS Trigger: GGATCCAAGACGTGTTTGTTTTCTGCACCAGAGGGGAGCTGTCAAAATATAGAGTCCCAAACCTTCTGGACCTCTACCAACAATATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067426.6 ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CCA 72 bp | AACTTACAACCTGGAAGAGCACATAAACCGAGAAACTaGGAACAATTCACTCGCGACAGAGGTAGCCATGAA | + |
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Preference number: 6 (lower is better) Translates to: NLQPGRAHKPRN*EQFTRDRGSHE Trigger: TTCATGGCTACCTCTGTCGCGAGTGAATTGTTCCCAGTTTCTCGGTTTATGTGCTCTTCCAGGTTGTAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067426.6 ENSMUST00000227149.2 ENSMUST00000228106.2 |
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| CDS CAA 72 bp | TGGGATCGGATGATGATGGGTGACAATTCCATATTGTaGGTAGAGGTCCAGAAGGTTTGGGACTCTATATTT | + |
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Preference number: 6 (lower is better) Translates to: WDRMMMGDNSIL*VEVQKVWDSIF Trigger: AAATATAGAGTCCCAAACCTTCTGGACCTCTACCAACAATATGGAATTGTCACCCATCATCATCCGATCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067426.6 ENSMUST00000227149.2 ENSMUST00000228106.2 |
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