Pregenerated sensors for CDKN2AIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038069Ensembl transcript IDs: ENSMUST00000038738.7, ENSMUST00000212175.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTGGAGCTGCTCCGAGCTGAGGTCCCACCACTCTCGGATTTGGTaGACGACCCCCTGGACGGCGAACTGTTTTCTTGCTGAGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: HWSCSELRSHHSRIW*TTPWTANCFLAELL Trigger: CAGCAGCTCAGCAAGAAAACAGTTCGCCGTCCAGGGGGTCGTCCACCAAATCCGAGAGTGGTGGGACCTCAGCTCGGAGCAGCTCCAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CCA 90 bp | AGCCACTGGAGCTGCTCCGAGCTGAGGTCCCACCACTCTCGGATTTaGTGGACGACCCCCTGGACGGCGAACTGTTTTCTTGCTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SHWSCSELRSHHSRI*WTTPWTANCFLAEL Trigger: CAGCTCAGCAAGAAAACAGTTCGCCGTCCAGGGGGTCGTCCACCAAATCCGAGAGTGGTGGGACCTCAGCTCGGAGCAGCTCCAGTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR TCA 90 bp | CTCTGGCTGCACACAGATCTGTCTCCTTCACTTGTGGCGCTATCCTaGTGGGAGCCACTGGAGCTGCTCCGAGCTGAGGTCCCACCACTC | + |
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Preference number: 1 (lower is better) Translates to: LWLHTDLSPSLVALS*WEPLELLRAEVPPL Trigger: GAGTGGTGGGACCTCAGCTCGGAGCAGCTCCAGTGGCTCCCATCAGGATAGCGCCACAAGTGAAGGAGACAGATCTGTGTGCAGCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR GCA 90 bp | TGTCTCCTTCACTTGTGGCGCTATCCTGATGGGAGCCACTGGAGCTaGTCCGAGCTGAGGTCCCACCACTCTCGGATTTGGTGGACGACC | + |
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Preference number: 1 (lower is better) Translates to: CLLHLWRYPDGSHWS*SELRSHHSRIWWTT Trigger: GGTCGTCCACCAAATCCGAGAGTGGTGGGACCTCAGCTCGGAGCAGCTCCAGTGGCTCCCATCAGGATAGCGCCACAAGTGAAGGAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CCA 90 bp | CAGATCTGTCTCCTTCACTTGTGGCGCTATCCTGATGGGAGCCACTaGAGCTGCTCCGAGCTGAGGTCCCACCACTCTCGGATTTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: QICLLHLWRYPDGSH*SCSELRSHHSRIWW Trigger: CCACCAAATCCGAGAGTGGTGGGACCTCAGCTCGGAGCAGCTCCAGTGGCTCCCATCAGGATAGCGCCACAAGTGAAGGAGACAGATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CCA 90 bp | TCCGAGCTGAGGTCCCACCACTCTCGGATTTGGTGGACGACCCCCTaGACGGCGAACTGTTTTCTTGCTGAGCTGCTGAACGATCCGTTT | + |
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Preference number: 1 (lower is better) Translates to: SELRSHHSRIWWTTP*TANCFLAELLNDPF Trigger: AAACGGATCGTTCAGCAGCTCAGCAAGAAAACAGTTCGCCGTCCAGGGGGTCGTCCACCAAATCCGAGAGTGGTGGGACCTCAGCTCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR GCA 90 bp | ACTCCAAAGCCTTTCCAGACCCTGCGGTTACCTGAGAGGAATTGCTaGTGCTCTGGCTGCACACAGATCTGTCTCCTTCACTTGTGGCGC | + |
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Preference number: 1 (lower is better) Translates to: TPKPFQTLRLPERNC*CSGCTQICLLHLWR Trigger: GCGCCACAAGTGAAGGAGACAGATCTGTGTGCAGCCAGAGCAGCAGCAATTCCTCTCAGGTAACCGCAGGGTCTGGAAAGGCTTTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR GCA 90 bp | CTGCACTTCCAGAGGAGCCCAACAAGGGCACCTCAATCTCTGAGCTaGTCTGAGAGGCTGAGCCTGAAGAACCTTCCAGAGCACCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: LHFQRSPTRAPQSLS*SERLSLKNLPEHPF Trigger: AAAAGGGTGCTCTGGAAGGTTCTTCAGGCTCAGCCTCTCAGAGCAGCTCAGAGATTGAGGTGCCCTTGTTGGGCTCCTCTGGAAGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR TCA 90 bp | CTTCCAGAGGAGCCCAACAAGGGCACCTCAATCTCTGAGCTGCTCTaGGAGGCTGAGCCTGAAGAACCTTCCAGAGCACCCTTTTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: LPEEPNKGTSISELL*EAEPEEPSRAPFLG Trigger: ACCTAAAAAGGGTGCTCTGGAAGGTTCTTCAGGCTCAGCCTCTCAGAGCAGCTCAGAGATTGAGGTGCCCTTGTTGGGCTCCTCTGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR GCA 90 bp | CCAAAGCCTTTCCAGACCCTGCGGTTACCTGAGAGGAATTGCTGCTaGTCTGGCTGCACACAGATCTGTCTCCTTCACTTGTGGCGCTAT | + |
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Preference number: 1 (lower is better) Translates to: PKPFQTLRLPERNCC*SGCTQICLLHLWRY Trigger: ATAGCGCCACAAGTGAAGGAGACAGATCTGTGTGCAGCCAGAGCAGCAGCAATTCCTCTCAGGTAACCGCAGGGTCTGGAAAGGCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR TCA 90 bp | AGTGTTGCTTTCAGAGCCTCAATAGCCGCGTTCAGCAGCTCTCCGTaGTTCACAGTGGGGCTGAAGCCACCAACTGCTACTAACTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: SVAFRASIAAFSSSP*FTVGLKPPTATNFH Trigger: GTGGAAGTTAGTAGCAGTTGGTGGCTTCAGCCCCACTGTGAATCACGGAGAGCTGCTGAACGCGGCTATTGAGGCTCTGAAAGCAACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR GCA 90 bp | AACTCTCACTGGCCTGGGAGGTACTTTTCGAAGGCAACTGTGAAGTaGTACTCTGAGAACCACTCTTGGCAGCTAGCTGAGACACGCTTC | + |
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Preference number: 1 (lower is better) Translates to: NSHWPGRYFSKATVK*YSENHSWQLAETRF Trigger: GAAGCGTGTCTCAGCTAGCTGCCAAGAGTGGTTCTCAGAGTAGCACTTCACAGTTGCCTTCGAAAAGTACCTCCCAGGCCAGTGAGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR GCA 90 bp | CGGGTCTTGCTTCTTCATCCAGGAGTACTAGATCCTCGATCTCGCTaGCTCGGTACTTCCTCTTACAGATCTTCACCACCACCTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: RVLLLHPGVLDPRSR*LGTSSYRSSPPPSS Trigger: AGAAGAAGGTGGTGGTGAAGATCTGTAAGAGGAAGTACCGAGGCAGCGAGATCGAGGATCTAGTACTCCTGGATGAAGAAGCAAGACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR TCA 90 bp | GCTTCTGTTTTATGTCTTCATTGGTTAACTTCCGACAAGCAAACTTaGCAGAACTCTCACTGGCCTGGGAGGTACTTTTCGAAGGCAACT | + |
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Preference number: 1 (lower is better) Translates to: ASVLCLHWLTSDKQT*QNSHWPGRYFSKAT Trigger: AGTTGCCTTCGAAAAGTACCTCCCAGGCCAGTGAGAGTTCTGTCAAGTTTGCTTGTCGGAAGTTAACCAATGAAGACATAAAACAGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR TCA 90 bp | CAGATACTGGATTCAGTGCCTACTTGGAGAAGTTACAGTAATTCTTaGGGATGTTTCAGTGCTGGAGGTAAGTTTACGGGTCTTGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: QILDSVPTWRSYSNS*GCFSAGGKFTGLAS Trigger: AGAAGCAAGACCCGTAAACTTACCTCCAGCACTGAAACATCCTCAAGAATTACTGTAACTTCTCCAAGTAGGCACTGAATCCAGTATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR TCA 90 bp | CACCAACTGCTACTAACTTCCACGCCACCGTCTTATACAGTCTATTaGAGAAAGGTTGCTTCTGTTTTATGTCTTCATTGGTTAACTTCC | + |
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Preference number: 1 (lower is better) Translates to: HQLLLTSTPPSYTVY*RKVASVLCLHWLTS Trigger: GGAAGTTAACCAATGAAGACATAAAACAGAAGCAACCTTTCTTCAATAGACTGTATAAGACGGTGGCGTGGAAGTTAGTAGCAGTTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CCA 90 bp | TCTGTTGTCTGTTATCAGTGGACTGGGTCATATGACTATTCATACTaGACTTCAACAGGGAAGAAACAAATGACGCTGAACCACGTTTAT | + |
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Preference number: 1 (lower is better) Translates to: SVVCYQWTGSYDYSY*TSTGKKQMTLNHVY Trigger: ATAAACGTGGTTCAGCGTCATTTGTTTCTTCCCTGTTGAAGTCCAGTATGAATAGTCATATGACCCAGTCCACTGATAACAGACAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR GCA 90 bp | ACTAACTTCCACGCCACCGTCTTATACAGTCTATTGAAGAAAGGTTaGTTCTGTTTTATGTCTTCATTGGTTAACTTCCGACAAGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: TNFHATVLYSLLKKG*FCFMSSLVNFRQAN Trigger: GTTTGCTTGTCGGAAGTTAACCAATGAAGACATAAAACAGAAGCAACCTTTCTTCAATAGACTGTATAAGACGGTGGCGTGGAAGTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR GCA 90 bp | TATAAAAGCCAGTTTTTCTCTTCAAACACCAGATACTGGATTCAGTaGCTACTTGGAGAAGTTACAGTAATTCTTGAGGATGTTTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: YKSQFFSSNTRYWIQ*LLGEVTVILEDVSV Trigger: CACTGAAACATCCTCAAGAATTACTGTAACTTCTCCAAGTAGGCACTGAATCCAGTATCTGGTGTTTGAAGAGAAAAACTGGCTTTTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR GCA 90 bp | GAACTCTCACTGGCCTGGGAGGTACTTTTCGAAGGCAACTGTGAAGTGCTACTCCAGCTACCTGAGCCGTaGTTTTGGATGTCAGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: ELSLAWEVLFEGNCEVLLQLPEP*FWMSAA Trigger: CGCTGCTGACATCCAAAAGCACGGCTCAGGTAGCTG...GAGTAGCACTTCACAGTTGCCTTCGAAAAGTACCTCCCAGGCCAGTGAGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR GCA 90 bp | TTGACAGAACTCTCACTGGCCTGGGAGGTACTTTTCGAAGGCAACTGTGAAGTGCCTCAATCTCTGAGCTaGTCTGAGAGGCTGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LTELSLAWEVLFEGNCEVPQSLS*SERLSL Trigger: CAGGCTCAGCCTCTCAGAGCAGCTCAGAGATTGAGG...CACTTCACAGTTGCCTTCGAAAAGTACCTCCCAGGCCAGTGAGAGTTCTGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR TCA 90 bp | GAACTCTCACTGGCCTGGGAGGTACTTTTCGAAGGCAACTGTGAAGTGCTACTCACTGGAAGCTGTCTCTaGACTAGACTTACAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: ELSLAWEVLFEGNCEVLLTGSCL*TRLTRQ Trigger: CTGTCTTGTAAGTCTAGTTCAGAGACAGCTTCCAGT...GAGTAGCACTTCACAGTTGCCTTCGAAAAGTACCTCCCAGGCCAGTGAGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR GCA 90 bp | GACTTACAAGACAGTAATGGCAACTCTACTTCTGCACTTCCAGAGGAGCCCAACAGCCTTTCCAGACCCTaGGGTTACCTGAGAGGAATT | + |
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Preference number: 2 (lower is better) Translates to: DLQDSNGNSTSALPEEPNSLSRP*GYLRGI Trigger: AATTCCTCTCAGGTAACCGCAGGGTCTGGAAAGGCT...GTTGGGCTCCTCTGGAAGTGCAGAAGTAGAGTTGCCATTACTGTCTTGTAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CAA 90 bp | GTAATTCTTGAGGATGTTTCAGTGCTGGAGGTAAGTTTACGGGTCTaGCTTCTTCATCCAGGAGTACTAGATCCTCGATCTCGCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VILEDVSVLEVSLRV*LLHPGVLDPRSRCL Trigger: GAGGCAGCGAGATCGAGGATCTAGTACTCCTGGATGAAGAAGCAAGACCCGTAAACTTACCTCCAGCACTGAAACATCCTCAAGAATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR GCA 90 bp | TTCACAGACAATACTTTCTTGAGAGCTCTTATTTTGAGGCAGATCTGCCAGTTCTGCTGCTGCTCTGGCTaGACACAGATCTGTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: FTDNTFLRALILRQICQFCCCSG*TQICLL Trigger: AAGGAGACAGATCTGTGTGCAGCCAGAGCAGCAGCA...GAACTGGCAGATCTGCCTCAAAATAAGAGCTCTCAAGAAAGTATTGTCTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CAA 90 bp | TGCTTCTGTTTTATGTCTTCATTGGTTAACTTCCGACAAGCAAACTaGACAGAACTCTCACTGGCCTGGGAGGTACTTTTCGAAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: CFCFMSSLVNFRQAN*TELSLAWEVLFEGN Trigger: GTTGCCTTCGAAAAGTACCTCCCAGGCCAGTGAGAGTTCTGTCAAGTTTGCTTGTCGGAAGTTAACCAATGAAGACATAAAACAGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACTTTTTCCACAGCCAGTaGCCAAATATACCGACTTAC | + |
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Preference number: 2 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDFFHSQ*PNIPTY Trigger: GTAAGTCGGTATATTTGGGCACTGGCTGTGGAAAAA...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR CCA 90 bp | TTCACAGACAATACTTTCTTGAGAGCTCTTATTTTGAGGCAGATCTGCCAGTTCGAATTGCTGCTGCTCTaGCTGCACACAGATCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: FTDNTFLRALILRQICQFELLLL*LHTDLS Trigger: AGACAGATCTGTGTGCAGCCAGAGCAGCAGCAATTC...GAACTGGCAGATCTGCCTCAAAATAAGAGCTCTCAAGAAAGTATTGTCTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR TCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTGAACTGTTTTCTTGCTaGGCTGCTGAACGATCCGTT | + |
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Preference number: 2 (lower is better) Translates to: VFSSANKTARWYAVNVHPELFSC*AAERSV Trigger: AACGGATCGTTCAGCAGCTCAGCAAGAAAACAGTTC...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTCTCTTCAAACACCAGATACTGGATTCAGTGCCTACTTGGAGAAGTTACTTTCGAAGGCAACTGTaGAGTGCTACTCTGAGAACC | + |
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Preference number: 2 (lower is better) Translates to: VFLFKHQILDSVPTWRSYFRRQL*SATLRT Trigger: GGTTCTCAGAGTAGCACTTCACAGTTGCCTTCGAAA...GTAACTTCTCCAAGTAGGCACTGAATCCAGTATCTGGTGTTTGAAGAGAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR GCA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGACCTGAGAGGAATTGCTaGTGCTCTGGCTGCACACAG | + |
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Preference number: 2 (lower is better) Translates to: RSFSTYIISIIVQCAVPRPERNC*CSGCTQ Trigger: CTGTGTGCAGCCAGAGCAGCAGCAATTCCTCTCAGG...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CAA 90 bp | GCCCAAATATACCGACTTACACCTCAATTCACAGACAATACTTTCTaGAGAGCTCTTATTTTGAGGCAGATCTGCCAGTTCTTTCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: AQIYRLTPQFTDNTF*RALILRQICQFFQW Trigger: CCACTGAAAGAACTGGCAGATCTGCCTCAAAATAAGAGCTCTCAAGAAAGTATTGTCTGTGAATTGAGGTGTAAGTCGGTATATTTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACCCCCCTTCTTTTATGTaGTTCAATCAAGTTAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDPPSFM*FNQVRK Trigger: TTTCCTAACTTGATTGAATCACATAAAAGAAGGGGG...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACAGCTGTTCAGCATCATaGGCAACATTTTTAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDSCSAS*ATFLNL Trigger: AAGGTTTAAAAATGTTGCTCATGATGCTGAACAGCT...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAGAGAGGAATTGCTGCTaGTCTGGCTGCACACAGATC | + |
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Preference number: 2 (lower is better) Translates to: RSFSTYIISIIVQCAVPRERNCC*SGCTQI Trigger: GATCTGTGTGCAGCCAGAGCAGCAGCAATTCCTCTC...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CAA 90 bp | CCACCAACTGCTACTAACTTCCACGCCACCGTCTTATACAGTCTATaGAAGAAAGGTTGCTTCTGTTTTATGTCTTCATTGGTTAACTTC | + |
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Preference number: 2 (lower is better) Translates to: PPTATNFHATVLYSL*KKGCFCFMSSLVNF Trigger: GAAGTTAACCAATGAAGACATAAAACAGAAGCAACCTTTCTTCAATAGACTGTATAAGACGGTGGCGTGGAAGTTAGTAGCAGTTGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTCTCTTCAAACACCAGATACTGGATTCAGTGCCTACTTGGAGAAGTTACCCACCACCTTCTTCTTaGGAAATAACTTCAGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: VFLFKHQILDSVPTWRSYPPPSS*EITSVL Trigger: AAGCACTGAAGTTATTTCTCAAGAAGAAGGTGGTGG...GTAACTTCTCCAAGTAGGCACTGAATCCAGTATCTGGTGTTTGAAGAGAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR CCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTTCAAACACCAGATACTaGATTCAGTGCCTACTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VFSSANKTARWYAVNVHPSNTRY*IQCLLG Trigger: TCCAAGTAGGCACTGAATCCAGTATCTGGTGTTTGA...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
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| 3UTR-3UTR TCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTAGTTACAGTAATTCTTaGGGATGTTTCAGTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VFSSANKTARWYAVNVHPSYSNS*GCFSAG Trigger: TCCAGCACTGAAACATCCTCAAGAATTACTGTAACT...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CAA 90 bp | TTATACAGTCTATTGAAGAAAGGTTGCTTCTGTTTTATGTCTTCATaGGTTAACTTCCGACAAGCAAACTTGACAGAACTCTCACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LYSLLKKGCFCFMSS*VNFRQANLTELSLA Trigger: GGCCAGTGAGAGTTCTGTCAAGTTTGCTTGTCGGAAGTTAACCAATGAAGACATAAAACAGAAGCAACCTTTCTTCAATAGACTGTATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR-3UTR CCA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCGTTTTATGTCTTCATTaGTTAACTTCCGACAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: HILSPLLSSVQFLESQKAVLCLH*LTSDKQ Trigger: TTGCTTGTCGGAAGTTAACCAATGAAGACATAAAAC...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CAA 90 bp | CTAGTAAATATGAAAGGTCTTTTTCTACATATATTATCTCCATTATaGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LVNMKGLFLHILSPL*SSVQFLESQKAKSH Trigger: ATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCTTTCATATTTACTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
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| 3UTR TCA 72 bp | GCTATCCTGATGGGAGCCACTGGAGCTGCTCCGAGCTaGGGTCCCACCACTCTCGGATTTGGTGGACGACCC | + |
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Preference number: 3 (lower is better) Translates to: AILMGATGAAPS*GPTTLGFGGRP Trigger: GGGTCGTCCACCAAATCCGAGAGTGGTGGGACCTCAGCTCGGAGCAGCTCCAGTGGCTCCCATCAGGATAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CCA 72 bp | CTCCTTCACTTGTGGCGCTATCCTGATGGGAGCCACTaGAGCTGCTCCGAGCTGAGGTCCCACCACTCTCGG | + |
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Preference number: 3 (lower is better) Translates to: LLHLWRYPDGSH*SCSELRSHHSR Trigger: CCGAGAGTGGTGGGACCTCAGCTCGGAGCAGCTCCAGTGGCTCCCATCAGGATAGCGCCACAAGTGAAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR GCA 72 bp | CACTTGTGGCGCTATCCTGATGGGAGCCACTGGAGCTaGTCCGAGCTGAGGTCCCACCACTCTCGGATTTGG | + |
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Preference number: 3 (lower is better) Translates to: HLWRYPDGSHWS*SELRSHHSRIW Trigger: CCAAATCCGAGAGTGGTGGGACCTCAGCTCGGAGCAGCTCCAGTGGCTCCCATCAGGATAGCGCCACAAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR TCA 72 bp | CCGCGTTCAGCAGCTCTCCGTGATTCACAGTGGGGCTaGAGCCACCAACTGCTACTAACTTCCACGCCACCG | + |
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Preference number: 3 (lower is better) Translates to: PRSAALRDSQWG*SHQLLLTSTPP Trigger: CGGTGGCGTGGAAGTTAGTAGCAGTTGGTGGCTTCAGCCCCACTGTGAATCACGGAGAGCTGCTGAACGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| 3UTR CCA 72 bp | TGCTCCGAGCTGAGGTCCCACCACTCTCGGATTTGGTaGACGACCCCCTGGACGGCGAACTGTTTTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CSELRSHHSRIW*TTPWTANCFLA Trigger: AGCAAGAAAACAGTTCGCCGTCCAGGGGGTCGTCCACCAAATCCGAGAGTGGTGGGACCTCAGCTCGGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR CCA 72 bp | AGCTGCTCCGAGCTGAGGTCCCACCACTCTCGGATTTaGTGGACGACCCCCTGGACGGCGAACTGTTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SCSELRSHHSRI*WTTPWTANCFL Trigger: AAGAAAACAGTTCGCCGTCCAGGGGGTCGTCCACCAAATCCGAGAGTGGTGGGACCTCAGCTCGGAGCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR TCA 72 bp | CACACAGATCTGTCTCCTTCACTTGTGGCGCTATCCTaGTGGGAGCCACTGGAGCTGCTCCGAGCTGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HTDLSPSLVALS*WEPLELLRAEV Trigger: GACCTCAGCTCGGAGCAGCTCCAGTGGCTCCCATCAGGATAGCGCCACAAGTGAAGGAGACAGATCTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR TCA 72 bp | GAGCCCAACAAGGGCACCTCAATCTCTGAGCTGCTCTaGGAGGCTGAGCCTGAAGAACCTTCCAGAGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: EPNKGTSISELL*EAEPEEPSRAP Trigger: GGGTGCTCTGGAAGGTTCTTCAGGCTCAGCCTCTCAGAGCAGCTCAGAGATTGAGGTGCCCTTGTTGGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR CCA 72 bp | AGGTCCCACCACTCTCGGATTTGGTGGACGACCCCCTaGACGGCGAACTGTTTTCTTGCTGAGCTGCTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RSHHSRIWWTTP*TANCFLAELLN Trigger: GTTCAGCAGCTCAGCAAGAAAACAGTTCGCCGTCCAGGGGGTCGTCCACCAAATCCGAGAGTGGTGGGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR CCA 72 bp | TGCTCTGGCTGCACACAGATCTGTCTCCTTCACTTGTaGCGCTATCCTGATGGGAGCCACTGGAGCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CSGCTQICLLHL*RYPDGSHWSCS Trigger: GGAGCAGCTCCAGTGGCTCCCATCAGGATAGCGCCACAAGTGAAGGAGACAGATCTGTGTGCAGCCAGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR GCA 72 bp | CAGAGGAGCCCAACAAGGGCACCTCAATCTCTGAGCTaGTCTGAGAGGCTGAGCCTGAAGAACCTTCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QRSPTRAPQSLS*SERLSLKNLPE Trigger: CTCTGGAAGGTTCTTCAGGCTCAGCCTCTCAGAGCAGCTCAGAGATTGAGGTGCCCTTGTTGGGCTCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR TCA 72 bp | TTCAGAGCCTCAATAGCCGCGTTCAGCAGCTCTCCGTaGTTCACAGTGGGGCTGAAGCCACCAACTGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: FRASIAAFSSSP*FTVGLKPPTAT Trigger: AGTAGCAGTTGGTGGCTTCAGCCCCACTGTGAATCACGGAGAGCTGCTGAACGCGGCTATTGAGGCTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR GCA 72 bp | CCTTTCCAGACCCTGCGGTTACCTGAGAGGAATTGCTaGTGCTCTGGCTGCACACAGATCTGTCTCCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PFQTLRLPERNC*CSGCTQICLLH Trigger: GTGAAGGAGACAGATCTGTGTGCAGCCAGAGCAGCAGCAATTCCTCTCAGGTAACCGCAGGGTCTGGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR TCA 72 bp | TCTGACTCCAAAGCCTTTCCAGACCCTGCGGTTACCTaGGAGGAATTGCTGCTGCTCTGGCTGCACACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SDSKAFPDPAVT*EELLLLWLHTD Trigger: ATCTGTGTGCAGCCAGAGCAGCAGCAATTCCTCTCAGGTAACCGCAGGGTCTGGAAAGGCTTTGGAGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR TCA 72 bp | GCGCCACTTTTGGTCGCTAGCAGTGAAGCAGCTACCTaGGCCGTGCTTTTGGATGTCAGCAGCGATGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: APLLVASSEAAT*AVLLDVSSDGF Trigger: AAATCCATCGCTGCTGACATCCAAAAGCACGGCTCAGGTAGCTGCTTCACTGCTAGCGACCAAAAGTGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR GCA 72 bp | TTCCAGACCCTGCGGTTACCTGAGAGGAATTGCTGCTaGTCTGGCTGCACACAGATCTGTCTCCTTCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: FQTLRLPERNCC*SGCTQICLLHL Trigger: CAAGTGAAGGAGACAGATCTGTGTGCAGCCAGAGCAGCAGCAATTCCTCTCAGGTAACCGCAGGGTCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR GCA 72 bp | TGGCCTGGGAGGTACTTTTCGAAGGCAACTGTGAAGTaGTACTCTGAGAACCACTCTTGGCAGCTAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: WPGRYFSKATVK*YSENHSWQLAE Trigger: CTCAGCTAGCTGCCAAGAGTGGTTCTCAGAGTAGCACTTCACAGTTGCCTTCGAAAAGTACCTCCCAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR CCA 72 bp | TCGCTAGCAGTGAAGCAGCTACCTGAGCCGTGCTTTTaGATGTCAGCAGCGATGGATTTGTGGAACTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLAVKQLPEPCF*MSAAMDLWNCS Trigger: AGAGCAGTTCCACAAATCCATCGCTGCTGACATCCAAAAGCACGGCTCAGGTAGCTGCTTCACTGCTAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR CCA 72 bp | TTGGATGTCAGCAGCGATGGATTTGTGGAACTGCTCTaGGGGGTTAGTAAAGAGCTGCCTGACGATGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LDVSSDGFVELL*GVSKELPDDEL Trigger: CAGTTCATCGTCAGGCAGCTCTTTACTAACCCCCCAGAGCAGTTCCACAAATCCATCGCTGCTGACATCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR GCA 72 bp | CTTCTTCATCCAGGAGTACTAGATCCTCGATCTCGCTaGCTCGGTACTTCCTCTTACAGATCTTCACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LLHPGVLDPRSR*LGTSSYRSSPP Trigger: TGGTGGTGAAGATCTGTAAGAGGAAGTACCGAGGCAGCGAGATCGAGGATCTAGTACTCCTGGATGAAGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR TCA 72 bp | TTATGTCTTCATTGGTTAACTTCCGACAAGCAAACTTaGCAGAACTCTCACTGGCCTGGGAGGTACTTTTCG | + |
|
Preference number: 3 (lower is better) Translates to: LCLHWLTSDKQT*QNSHWPGRYFS Trigger: CGAAAAGTACCTCCCAGGCCAGTGAGAGTTCTGTCAAGTTTGCTTGTCGGAAGTTAACCAATGAAGACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR TCA 72 bp | CTACTAACTTCCACGCCACCGTCTTATACAGTCTATTaGAGAAAGGTTGCTTCTGTTTTATGTCTTCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLTSTPPSYTVY*RKVASVLCLHW Trigger: CCAATGAAGACATAAAACAGAAGCAACCTTTCTTCAATAGACTGTATAAGACGGTGGCGTGGAAGTTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR GCA 72 bp | CACGCCACCGTCTTATACAGTCTATTGAAGAAAGGTTaGTTCTGTTTTATGTCTTCATTGGTTAACTTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: HATVLYSLLKKG*FCFMSSLVNFR Trigger: TCGGAAGTTAACCAATGAAGACATAAAACAGAAGCAACCTTTCTTCAATAGACTGTATAAGACGGTGGCGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR GCA 72 bp | CAGTTTTTCTCTTCAAACACCAGATACTGGATTCAGTaGCTACTTGGAGAAGTTACAGTAATTCTTGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QFFSSNTRYWIQ*LLGEVTVILED Trigger: ATCCTCAAGAATTACTGTAACTTCTCCAAGTAGGCACTGAATCCAGTATCTGGTGTTTGAAGAGAAAAACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR TCA 72 bp | TATGTTTTATACTATGAAAACTACTTGGTTGTAGTTTaGATAGTAGTGAGGAGCCTTAGTTATGACCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: YVLYYENYLVVV*IVVRSLSYDQG Trigger: ACCCTGGTCATAACTAAGGCTCCTCACTACTATTCAAACTACAACCAAGTAGTTTTCATAGTATAAAACATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| 3UTR CAA 72 bp | GAGCTGCTCCGAGCTGAGGTCCCACCACTCTCGGATTaGGTGGACGACCCCCTGGACGGCGAACTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELLRAEVPPLSD*VDDPLDGELFS Trigger: AGAAAACAGTTCGCCGTCCAGGGGGTCGTCCACCAAATCCGAGAGTGGTGGGACCTCAGCTCGGAGCAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR CAA 72 bp | TGCTGCTCTGGCTGCACACAGATCTGTCTCCTTCACTaGTGGCGCTATCCTGATGGGAGCCACTGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CCSGCTQICLLH*WRYPDGSHWSC Trigger: GCAGCTCCAGTGGCTCCCATCAGGATAGCGCCACAAGTGAAGGAGACAGATCTGTGTGCAGCCAGAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR GCA 90 bp | GCTGAGCCTGAAGAACCTTCCAGAGCACCCTTTTTAGGTGACCCACTCTGTTGTCCAGGTCCCCGGCATTaGGAAGCAGAAACTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEPEEPSRAPFLGDPLCCPGPRH*EAETPG Trigger: GCCGGGAGTTTCTGCTTCGCAATGCCGGGGACCTGG...ACAACAGAGTGGGTCACCTAAAAAGGGTGCTCTGGAAGGTTCTTCAGGCTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR GCA 90 bp | AGTACTAGATCCTCGATCTCGCTGCCTCGGTACTTCCTCTTACAGATCTTCACCGAGAAGGAGACCAGCTaGTGGAGCTGCCGAGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: STRSSISLPRYFLLQIFTEKETS*WSCRVR Trigger: CCGCACTCGGCAGCTCCAGCAGCTGGTCTCCTTCTC...GGTGAAGATCTGTAAGAGGAAGTACCGAGGCAGCGAGATCGAGGATCTAGTACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR CCA 90 bp | AGTACTAGATCCTCGATCTCGCTGCCTCGGTACTTCCTCTTACAGATCTTCACCGGTTCGCCCAGGCCATaGAGAAGGAGACCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: STRSSISLPRYFLLQIFTGSPRP*RRRPAA Trigger: AGCAGCTGGTCTCCTTCTCCATGGCCTGGGCGAACC...GGTGAAGATCTGTAAGAGGAAGTACCGAGGCAGCGAGATCGAGGATCTAGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR GCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACCCAGGTCCCCGGCATTaGGAAGCAGAAACTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDPGPRH*EAETPG Trigger: GCCGGGAGTTTCTGCTTCGCAATGCCGGGGACCTGG...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCCTTCACTTGTGGCGCTATCCTGATGGGAGCCACTGGAGCTGCTCCGAGCTCGTGTGGTATGGATTaGAGCATCTGTCACTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSFTCGAILMGATGAAPSSCGMD*SICHFD Trigger: ATCAAAGTGACAGATGCTCCAATCCATACCACACGA...GCTCGGAGCAGCTCCAGTGGCTCCCATCAGGATAGCGCCACAAGTGAAGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTCAAACACCAGATACTGGATTCAGTGCCTACTTGGAGAAGTTACAGTACCAGCTGCTGGAGCTaGCGAGTGCGGGCTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLFKHQILDSVPTWRSYSTSCWS*RVRAPL Trigger: GAGCGGAGCCCGCACTCGGCAGCTCCAGCAGCTGGT...ACTGTAACTTCTCCAAGTAGGCACTGAATCCAGTATCTGGTGTTTGAAGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTACCAGCTGCTGGAGCTaGCGAGTGCGGGCTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFSSANKTARWYAVNVHPTSCWS*RVRAPL Trigger: GAGCGGAGCCCGCACTCGGCAGCTCCAGCAGCTGGT...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACCAGCTACCTGAGCCGTaGTTTTGGATGTCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDQLPEP*FWMSAA Trigger: CGCTGCTGACATCCAAAAGCACGGCTCAGGTAGCTG...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAGAAACTCCCGGCGGTaGCGCCAGTGTTTGTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HILSPLLSSVQFLESQKARNSRR*RQCLSV Trigger: GACGGACAAACACTGGCGCCACCGCCGGGAGTTTCT...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACGAGAGGAATTGCTGCTaGTCTGGCTGCACACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDERNCC*SGCTQI Trigger: GATCTGTGTGCAGCCAGAGCAGCAGCAATTCCTCTC...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | TTCACAGACAATACTTTCTTGAGAGCTCTTATTTTGAGGCAGATCTGCCAGTTCGCTACCCGCGGGTTTTaGCTCAGGTACTCGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: FTDNTFLRALILRQICQFATRGF*LRYSDT Trigger: GGTGTCCGAGTACCTGAGCCAAAACCCGCGGGTAGC...GAACTGGCAGATCTGCCTCAAAATAAGAGCTCTCAAGAAAGTATTGTCTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTAGAAACTCCCGGCGGTaGCGCCAGTGTTTGTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFSSANKTARWYAVNVHPRNSRR*RQCLSV Trigger: GACGGACAAACACTGGCGCCACCGCCGGGAGTTTCT...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCCACCCTAGGAAGACATaGTTCGCCCAGGCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HILSPLLSSVQFLESQKAHPRKT*FAQAME Trigger: CTCCATGGCCTGGGCGAACCATGTCTTCCTAGGGTG...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | GACTTACAAGACAGTAATGGCAACTCTACTTCTGCACTTCCAGAGGAGCCCAACCCAGTTCGTCTCGTGTaGTATGGATTGGAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLQDSNGNSTSALPEEPNPVRLV*YGLEHL Trigger: CAGATGCTCCAATCCATACCACACGAGACGAACTGG...GTTGGGCTCCTCTGGAAGTGCAGAAGTAGAGTTGCCATTACTGTCTTGTAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR GCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACTTACCTGAGAGGAATTaGTGCTGCTCTGGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDLPERN*CCSGCT Trigger: TGTGCAGCCAGAGCAGCAGCAATTCCTCTCAGGTAA...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTCCTGAGAGGAATTGCTaGTGCTCTGGCTGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VFSSANKTARWYAVNVHPPERNC*CSGCTQ Trigger: CTGTGTGCAGCCAGAGCAGCAGCAATTCCTCTCAGG...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTCCTCAATCTCTGAGCTaGTCTGAGAGGCTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFSSANKTARWYAVNVHPPQSLS*SERLSL Trigger: CAGGCTCAGCCTCTCAGAGCAGCTCAGAGATTGAGG...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACCTCTTTTCTTCACCTTaGCAACCAGTTCGTCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDLFSSP*QPVRLV Trigger: CACGAGACGAACTGGTTGCCAAGGTGAAGAAAAGAG...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| 3UTR CAA 72 bp | GAAATAACTTCAGTGCTTCTCTCGATGCGACGGCTTTaGCGTTTTCTTTGCTTTTTCCACAGCCAGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EITSVLLSMRRL*RFLCFFHSQCP Trigger: TGGGCACTGGCTGTGGAAAAAGCAAAGAAAACGCAAAAGCCGTCGCATCGAGAGAAGCACTGAAGTTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR CAA 72 bp | GAGGATGTTTCAGTGCTGGAGGTAAGTTTACGGGTCTaGCTTCTTCATCCAGGAGTACTAGATCCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: EDVSVLEVSLRV*LLHPGVLDPRS Trigger: AGATCGAGGATCTAGTACTCCTGGATGAAGAAGCAAGACCCGTAAACTTACCTCCAGCACTGAAACATCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR TCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACACTGGAAGCTGTCTCTaGACTAGACTTACAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDTGSCL*TRLTRQ Trigger: CTGTCTTGTAAGTCTAGTTCAGAGACAGCTTCCAGT...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR TCA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCTCCGACAAGCAAACTTaGCAGAACTCTCACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HILSPLLSSVQFLESQKASDKQT*QNSHWP Trigger: AGGCCAGTGAGAGTTCTGTCAAGTTTGCTTGTCGGA...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTTGCTGCTGCTCTGGCTaGACACAGATCTGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFSSANKTARWYAVNVHPCCCSG*TQICLL Trigger: AAGGAGACAGATCTGTGTGCAGCCAGAGCAGCAGCA...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAGCTACCCGCGGGTTTTaGCTCAGGTACTCGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RSFSTYIISIIVQCAVPRATRGF*LRYSDT Trigger: GGTGTCCGAGTACCTGAGCCAAAACCCGCGGGTAGC...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTGAACTCTCACTGGCCTaGGAGGTACTTTTCGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFSSANKTARWYAVNVHPELSLA*EVLFEG Trigger: GCCTTCGAAAAGTACCTCCCAGGCCAGTGAGAGTTC...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR TCA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCTTTCGAAGGCAACTGTaGAGTGCTACTCTGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: HILSPLLSSVQFLESQKAFRRQL*SATLRT Trigger: GGTTCTCAGAGTAGCACTTCACAGTTGCCTTCGAAA...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACCCACCACCTTCTTCTTaGGAAATAACTTCAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDPPPSS*EITSVL Trigger: AAGCACTGAAGTTATTTCTCAAGAAGAAGGTGGTGG...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTGAATTGCTGCTGCTCTaGCTGCACACAGATCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFSSANKTARWYAVNVHPELLLL*LHTDLS Trigger: AGACAGATCTGTGTGCAGCCAGAGCAGCAGCAATTC...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCATTTTGAGGCAGATCTaGCAGTTCTTTCAGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HILSPLLSSVQFLESQKAILRQI*QFFQWD Trigger: GTCCCACTGAAAGAACTGGCAGATCTGCCTCAAAAT...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCTCTTCAAACACCAGATACTGGATTCAGTGCCTACTTGGAGAAGTTACTCGTCTCGTGTGGTATaGATTGGAGCATCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VFLFKHQILDSVPTWRSYSSRVV*IGASVT Trigger: AGTGACAGATGCTCCAATCCATACCACACGAGACGA...GTAACTTCTCCAAGTAGGCACTGAATCCAGTATCTGGTGTTTGAAGAGAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| 3UTR CAA 72 bp | TTTATGTCTTCATTGGTTAACTTCCGACAAGCAAACTaGACAGAACTCTCACTGGCCTGGGAGGTACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FMSSLVNFRQAN*TELSLAWEVLF Trigger: GAAAAGTACCTCCCAGGCCAGTGAGAGTTCTGTCAAGTTTGCTTGTCGGAAGTTAACCAATGAAGACATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR TCA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCCCCTTCATTGCTACTTaGTATCCCTCTTTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HILSPLLSSVQFLESQKAPFIAT*YPSFLH Trigger: GTGAAGAAAAGAGGGATATCAAGTAGCAATGAAGGG...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGACTCTTGGCAGCTAGCTaGGACACGCTTCCTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSFSTYIISIIVQCAVPRLLAAS*DTLPKE Trigger: TTCCTTAGGAAGCGTGTCTCAGCTAGCTGCCAAGAG...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTCCTCTACCCCTTCATTaGTACTTGATATCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFSSANKTARWYAVNVHPPLPLH*YLISLF Trigger: AAAGAGGGATATCAAGTAGCAATGAAGGGGTAGAGG...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAGCCTTTCCAGACCCTaGGGTTACCTGAGAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: RSFSTYIISIIVQCAVPRSLSRP*GYLRGI Trigger: AATTCCTCTCAGGTAACCGCAGGGTCTGGAAAGGCT...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTAAACACATCCAGTGTTaGTTTCAGAGCCTCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFSSANKTARWYAVNVHPKHIQC*FQSLNS Trigger: GCTATTGAGGCTCTGAAAGCAACACTGGATGTGTTT...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTTTTTTCCACAGCCAGTaGCCAAATATACCGACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VFSSANKTARWYAVNVHPFFHSQ*PNIPTY Trigger: GTAAGTCGGTATATTTGGGCACTGGCTGTGGAAAAA...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGACCAGTTCGTCTCGTGTaGTATGGATTGGAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSFSTYIISIIVQCAVPRPVRLV*YGLEHL Trigger: CAGATGCTCCAATCCATACCACACGAGACGAACTGG...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCAAAAGTCATATACCTTAGACGTTTTATGTCTTCATTaGTTAACTTCCGACAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VQCAVPRKPEGQKSYTLDVLCLH*LTSDKQ Trigger: TTGCTTGTCGGAAGTTAACCAATGAAGACATAAAAC...GTCTAAGGTATATGACTTTTGGCCTTCTGGCTTTCTAGGAACTGCACACTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGATCGTCTCGTGTGGTATaGATTGGAGCATCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RSFSTYIISIIVQCAVPRSSRVV*IGASVT Trigger: AGTGACAGATGCTCCAATCCATACCACACGAGACGA...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGGCAACTGTGAAGTaGTACTCTGAGAACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSFSTYIISIIVQCAVPRKATVK*YSENHS Trigger: AGAGTGGTTCTCAGAGTAGCACTTCACAGTTGCCTT...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| 3UTR CAA 72 bp | ATGAAAGGTCTTTTTCTACATATATTATCTCCATTATaGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MKGLFLHILSPL*SSVQFLESQKA Trigger: GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCTTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGATCGTGTGGTATGGATTaGAGCATCTGTCACTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSFSTYIISIIVQCAVPRSCGMD*SICHFD Trigger: ATCAAAGTGACAGATGCTCCAATCCATACCACACGA...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| 3UTR CAA 72 bp | CTATTGAAGAAAGGTTGCTTCTGTTTTATGTCTTCATaGGTTAACTTCCGACAAGCAAACTTGACAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKKGCFCFMSS*VNFRQANLTEL Trigger: GAGTTCTGTCAAGTTTGCTTGTCGGAAGTTAACCAATGAAGACATAAAACAGAAGCAACCTTTCTTCAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS CCA 90 bp | GCTGCCGAGTGCGGGCTCCGCTCTCCGCGTCCGCAGTCTCGTCGGTaGCGGGGACCAGGTCCCCGGCATTGCGAAGCAGAAACTCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AAECGLRSPRPQSRR*RGPGPRHCEAETPG Trigger: GCCGGGAGTTTCTGCTTCGCAATGCCGGGGACCTGGTCCCCGCCACCGACGAGACTGCGGACGCGGAGAGCGGAGCCCGCACTCGGCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS GCA 90 bp | TCGCCCAGGCCATGGAGAAGGAGACCAGCTGCTGGAGCTGCCGAGTaGGGGCTCCGCTCTCCGCGTCCGCAGTCTCGTCGGTGGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPRPWRRRPAAGAAE*GLRSPRPQSRRWRG Trigger: TCCCCGCCACCGACGAGACTGCGGACGCGGAGAGCGGAGCCCGCACTCGGCAGCTCCAGCAGCTGGTCTCCTTCTCCATGGCCTGGGCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS CCA 90 bp | GCGGGGACCAGGTCCCCGGCATTGCGAAGCAGAAACTCCCGGCGGTaGCGCCAGTGTTTGTCCGTCTCGCCCTCGCAGCGCAGCGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGTRSPALRSRNSRR*RQCLSVSPSQRSVS Trigger: GGAGACGCTGCGCTGCGAGGGCGAGACGGACAAACACTGGCGCCACCGCCGGGAGTTTCTGCTTCGCAATGCCGGGGACCTGGTCCCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS GCA 90 bp | ACATGGTTCGCCCAGGCCATGGAGAAGGAGACCAGCTGCTGGAGCTaGCGAGTGCGGGCTCCGCTCTCCGCGTCCGCAGTCTCGTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TWFAQAMEKETSCWS*RVRAPLSASAVSSV Trigger: CACCGACGAGACTGCGGACGCGGAGAGCGGAGCCCGCACTCGGCAGCTCCAGCAGCTGGTCTCCTTCTCCATGGCCTGGGCGAACCATGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS GCA 90 bp | CCTAGGAAGACATGGTTCGCCCAGGCCATGGAGAAGGAGACCAGCTaGTGGAGCTGCCGAGTGCGGGCTCCGCTCTCCGCGTCCGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRKTWFAQAMEKETS*WSCRVRAPLSASAV Trigger: GACTGCGGACGCGGAGAGCGGAGCCCGCACTCGGCAGCTCCAGCAGCTGGTCTCCTTCTCCATGGCCTGGGCGAACCATGTCTTCCTAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS CCA 90 bp | AGGAAGACATGGTTCGCCCAGGCCATGGAGAAGGAGACCAGCTGCTaGAGCTGCCGAGTGCGGGCTCCGCTCTCCGCGTCCGCAGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RKTWFAQAMEKETSC*SCRVRAPLSASAVS Trigger: CGAGACTGCGGACGCGGAGAGCGGAGCCCGCACTCGGCAGCTCCAGCAGCTGGTCTCCTTCTCCATGGCCTGGGCGAACCATGTCTTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS CCA 90 bp | TTTGAGGGTACCGGCACCCTAGGAAGACATGGTTCGCCCAGGCCATaGAGAAGGAGACCAGCTGCTGGAGCTGCCGAGTGCGGGCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FEGTGTLGRHGSPRP*RRRPAAGAAECGLR Trigger: GCGGAGCCCGCACTCGGCAGCTCCAGCAGCTGGTCTCCTTCTCCATGGCCTGGGCGAACCATGTCTTCCTAGGGTGCCGGTACCCTCAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | AAGACAGTAATGGCAACTCTACTTCTGCACTTCCAGAGGAGCCCAACAAGGGCACGGTGGCGCCAGTGTTaGTCCGTCTCGCCCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KTVMATLLLHFQRSPTRARWRQC*SVSPSQ Trigger: CTGCGAGGGCGAGACGGACAAACACTGGCGCCACCG...TGCCCTTGTTGGGCTCCTCTGGAAGTGCAGAAGTAGAGTTGCCATTACTGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTCGGTGGCGCCAGTGTTaGTCCGTCTCGCCCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VFSSANKTARWYAVNVHPRWRQC*SVSPSQ Trigger: CTGCGAGGGCGAGACGGACAAACACTGGCGCCACCG...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCACCAGGTCCCCGGCATaGCGAAGCAGAAACTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HILSPLLSSVQFLESQKATRSPA*RSRNSR Trigger: CCGGGAGTTTCTGCTTCGCAATGCCGGGGACCTGGT...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | TTCACAGACAATACTTTCTTGAGAGCTCTTATTTTGAGGCAGATCTGCCAGTTCGGCTACCCGCGGGTTTaGGCTCAGGTACTCGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: FTDNTFLRALILRQICQFGYPRV*AQVLGH Trigger: GTGTCCGAGTACCTGAGCCAAAACCCGCGGGTAGCC...GAACTGGCAGATCTGCCTCAAAATAAGAGCTCTCAAGAAAGTATTGTCTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTGGCTACCCGCGGGTTTaGGCTCAGGTACTCGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: VFSSANKTARWYAVNVHPGYPRV*AQVLGH Trigger: GTGTCCGAGTACCTGAGCCAAAACCCGCGGGTAGCC...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | GAACTCTCACTGGCCTGGGAGGTACTTTTCGAAGGCAACTGTGAAGTGCTACTCGGAGCATCTGTCACTTaGATGCCTTCAGCCATACTA | + |
|
Preference number: 5 (lower is better) Translates to: ELSLAWEVLFEGNCEVLLGASVT*MPSAIL Trigger: TAGTATGGCTGAAGGCATCAAAGTGACAGATGCTCC...GAGTAGCACTTCACAGTTGCCTTCGAAAAGTACCTCCCAGGCCAGTGAGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
||
| CDS CCA 90 bp | CCTCTACCCCTTCATTGCTACTTGATATCCCTCTTTTCTTCACCTTaGCAACCAGTTCGTCTCGTGTGGTATGGATTGGAGCATCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLPLHCYLISLFSSP*QPVRLVWYGLEHLS Trigger: TGACAGATGCTCCAATCCATACCACACGAGACGAACTGGTTGCCAAGGTGAAGAAAAGAGGGATATCAAGTAGCAATGAAGGGGTAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS CCA 90 bp | ATCCCTCTTTTCTTCACCTTGGCAACCAGTTCGTCTCGTGTGGTATaGATTGGAGCATCTGTCACTTTGATGCCTTCAGCCATACTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IPLFFTLATSSSRVV*IGASVTLMPSAILR Trigger: TCTTAGTATGGCTGAAGGCATCAAAGTGACAGATGCTCCAATCCATACCACACGAGACGAACTGGTTGCCAAGGTGAAGAAAAGAGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCCCTCTTTTCTTCACCTaGGCAACCAGTTCGTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: HILSPLLSSVQFLESQKAPLFFT*ATSSSR Trigger: ACGAGACGAACTGGTTGCCAAGGTGAAGAAAAGAGG...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS CCA 90 bp | TCTTTTCTTCACCTTGGCAACCAGTTCGTCTCGTGTGGTATGGATTaGAGCATCTGTCACTTTGATGCCTTCAGCCATACTAAGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFLHLGNQFVSCGMD*SICHFDAFSHTKNF Trigger: AAAATTCTTAGTATGGCTGAAGGCATCAAAGTGACAGATGCTCCAATCCATACCACACGAGACGAACTGGTTGCCAAGGTGAAGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTGGAGCATCTGTCACTTaGATGCCTTCAGCCATACTA | + |
|
Preference number: 5 (lower is better) Translates to: VFSSANKTARWYAVNVHPGASVT*MPSAIL Trigger: TAGTATGGCTGAAGGCATCAAAGTGACAGATGCTCC...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCTTCAGCAAATAAAACAGCACGCTGGTATGCTGTCAATGTACACCCTCCCCTTCATTGCTACTaGATATCCCTCTTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFSSANKTARWYAVNVHPPLHCY*ISLFSS Trigger: TGAAGAAAAGAGGGATATCAAGTAGCAATGAAGGGG...AGGGTGTACATTGACAGCATACCAGCGTGCTGTTTTATTTGCTGAAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCTGTTTTATGTCTTCATaGGTTAACTTCCGACAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HILSPLLSSVQFLESQKACFMSS*VNFRQA Trigger: TGCTTGTCGGAAGTTAACCAATGAAGACATAAAACA...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | CATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGAAAGCCAGAAGGCCGTCTTATACAGTCTATaGAAGAAAGGTTGCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HILSPLLSSVQFLESQKAVLYSL*KKGCFC Trigger: ACAGAAGCAACCTTTCTTCAATAGACTGTATAAGAC...GGCCTTCTGGCTTTCTAGGAACTGCACACTGGACAATAATGGAGATAATATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGATTGAGAGCTCTTATTTaGAGGCAGATCTGCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSFSTYIISIIVQCAVPRLRALI*RQICQF Trigger: GAACTGGCAGATCTGCCTCAAAATAAGAGCTCTCAA...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCTTTTTCTACATATATTATCTCCATTATTGTCCAGTGTGCAGTTCCTAGATCGATGCGACGGCTTTaGCGTTTTCTTTGCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSFSTYIISIIVQCAVPRSMRRL*RFLCFF Trigger: GAAAAAGCAAAGAAAACGCAAAAGCCGTCGCATCGA...TCTAGGAACTGCACACTGGACAATAATGGAGATAATATATGTAGAAAAAGACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
||
| CDS CCA 72 bp | TGCGGGCTCCGCTCTCCGCGTCCGCAGTCTCGTCGGTaGCGGGGACCAGGTCCCCGGCATTGCGAAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CGLRSPRPQSRR*RGPGPRHCEAE Trigger: TTCTGCTTCGCAATGCCGGGGACCTGGTCCCCGCCACCGACGAGACTGCGGACGCGGAGAGCGGAGCCCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS GCA 72 bp | CCATGGAGAAGGAGACCAGCTGCTGGAGCTGCCGAGTaGGGGCTCCGCTCTCCGCGTCCGCAGTCTCGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PWRRRPAAGAAE*GLRSPRPQSRR Trigger: CCGACGAGACTGCGGACGCGGAGAGCGGAGCCCGCACTCGGCAGCTCCAGCAGCTGGTCTCCTTCTCCATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS CCA 72 bp | TGGTTCGCCCAGGCCATGGAGAAGGAGACCAGCTGCTaGAGCTGCCGAGTGCGGGCTCCGCTCTCCGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WFAQAMEKETSC*SCRVRAPLSAS Trigger: GGACGCGGAGAGCGGAGCCCGCACTCGGCAGCTCCAGCAGCTGGTCTCCTTCTCCATGGCCTGGGCGAACCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS GCA 72 bp | ACATGGTTCGCCCAGGCCATGGAGAAGGAGACCAGCTaGTGGAGCTGCCGAGTGCGGGCTCCGCTCTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: TWFAQAMEKETS*WSCRVRAPLSA Trigger: CGCGGAGAGCGGAGCCCGCACTCGGCAGCTCCAGCAGCTGGTCTCCTTCTCCATGGCCTGGGCGAACCATGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
||
| CDS CCA 72 bp | AGGTCCCCGGCATTGCGAAGCAGAAACTCCCGGCGGTaGCGCCAGTGTTTGTCCGTCTCGCCCTCGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RSPALRSRNSRR*RQCLSVSPSQR Trigger: GCGCTGCGAGGGCGAGACGGACAAACACTGGCGCCACCGCCGGGAGTTTCTGCTTCGCAATGCCGGGGACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
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| CDS CCA 72 bp | ACCGGCACCCTAGGAAGACATGGTTCGCCCAGGCCATaGAGAAGGAGACCAGCTGCTGGAGCTGCCGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: TGTLGRHGSPRP*RRRPAAGAAEC Trigger: GCACTCGGCAGCTCCAGCAGCTGGTCTCCTTCTCCATGGCCTGGGCGAACCATGTCTTCCTAGGGTGCCGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
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| CDS CCA 72 bp | CACCTTGGCAACCAGTTCGTCTCGTGTGGTATGGATTaGAGCATCTGTCACTTTGATGCCTTCAGCCATACT | + |
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Preference number: 6 (lower is better) Translates to: HLGNQFVSCGMD*SICHFDAFSHT Trigger: AGTATGGCTGAAGGCATCAAAGTGACAGATGCTCCAATCCATACCACACGAGACGAACTGGTTGCCAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
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| CDS CCA 72 bp | CTTCTTGGCAACCAGTTCGTCTCGTGTGGTATGGATTaGAGCATCTGTCACTTTGATGCCTTCAGCCATACT | + |
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Preference number: 6 (lower is better) Translates to: LLGNQFVSCGMD*SICHFDAFSHT Trigger: AGTATGGCTGAAGGCATCAAAGTGACAGATGCTCCAATCCATACCACACGAGACGAACTGGTTGCCAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038738.7 |
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| CDS CAA 90 bp | TCCTCTACCCCTTCATTGCTACTTGATATCCCTCTTTTCTTCACCTaGGCAACCAGTTCGTCTCGTGTGGTATGGATTGGAGCATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SSTPSLLLDIPLFFT*ATSSSRVVWIGASV Trigger: GACAGATGCTCCAATCCATACCACACGAGACGAACTGGTTGCCAAGGTGAAGAAAAGAGGGATATCAAGTAGCAATGAAGGGGTAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
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| CDS CCA 72 bp | CTTCATTGCTACTTGATATCCCTCTTTTCTTCACCTTaGCAACCAGTTCGTCTCGTGTGGTATGGATTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LHCYLISLFSSP*QPVRLVWYGLE Trigger: CTCCAATCCATACCACACGAGACGAACTGGTTGCCAAGGTGAAGAAAAGAGGGATATCAAGTAGCAATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
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| CDS CAA 72 bp | CCTTCATTGCTACTTGATATCCCTCTTTTCTTCACCTaGGCAACCAGTTCGTCTCGTGTGGTATGGATTGGA | + |
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Preference number: 6 (lower is better) Translates to: PSLLLDIPLFFT*ATSSSRVVWIG Trigger: TCCAATCCATACCACACGAGACGAACTGGTTGCCAAGGTGAAGAAAAGAGGGATATCAAGTAGCAATGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212175.2 |
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| CDS CAA 72 bp | TCGTCTCGTGTGGTATGGATTGGAGCATCTGTCACTTaGATGCCTTCAGCCATACTAAGAATTTTATCCATA | + |
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Preference number: 6 (lower is better) Translates to: SSRVVWIGASVT*MPSAILRILSI Trigger: TATGGATAAAATTCTTAGTATGGCTGAAGGCATCAAAGTGACAGATGCTCCAATCCATACCACACGAGACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038738.7 ENSMUST00000212175.2 |
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