Pregenerated sensors for CDKN1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003031Ensembl transcript IDs: ENSMUST00000003115.9, ENSMUST00000067327.11, ENSMUST00000204807.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAAGTTTTAGTGGGATTCATAAGGATACGACCGTCCCTATCCTTTaGGGCCTTGGTGGCAAGTTCTTGCTTGGGAACCTCATTCTGATT | + |
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Preference number: 1 (lower is better) Translates to: LSFSGIHKDTTVPIL*GLGGKFLLGNLILI Trigger: AATCAGAATGAGGTTCCCAAGCAAGAACTTGCCACCAAGGCCCCAAAGGATAGGGACGGTCGTATCCTTATGAATCCCACTAAAACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR CCA 90 bp | TCTGATTGTCACAGCTTCGGGAAGAAGATTGCTACTGGCATCTTGTaGGGGAGGCCAGAGATAATGCCAAACATTCTAAAATGCACAGGA | + |
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Preference number: 1 (lower is better) Translates to: SDCHSFGKKIATGIL*GRPEIMPNILKCTG Trigger: TCCTGTGCATTTTAGAATGTTTGGCATTATCTCTGGCCTCCCCCACAAGATGCCAGTAGCAATCTTCTTCCCGAAGCTGTGACAATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR TCA 90 bp | TCCTTTGGGGCCTTGGTGGCAAGTTCTTGCTTGGGAACCTCATTCTaGTTCCACTTTAAGGTAAATATCTTGGGGTGCAAATACTGCATT | + |
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Preference number: 1 (lower is better) Translates to: SFGALVASSCLGTSF*FHFKVNILGCKYCI Trigger: AATGCAGTATTTGCACCCCAAGATATTTACCTTAAAGTGGAATCAGAATGAGGTTCCCAAGCAAGAACTTGCCACCAAGGCCCCAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR TCA 90 bp | AATAGGCTATTGGCTCAAAACGAACCTCTGGGAAATGGGTTCTCATaGACTGAGACTGGAAAGGAAAACTGTCATTCCCAGCCTAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: NRLLAQNEPLGNGFS*TETGKENCHSQPKF Trigger: AAACTTAGGCTGGGAATGACAGTTTTCCTTTCCAGTCTCAGTTCATGAGAACCCATTTCCCAGAGGTTCGTTTTGAGCCAATAGCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR GCA 90 bp | CACCAAGTCGAGGAATGTTTACAAAATTGCAATTTCTTACTCATATaGAGCATATCTGCACGAGTGCTTTTGACTAGAGTCTTATGGTTG | + |
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Preference number: 1 (lower is better) Translates to: HQVEECLQNCNFLLI*SISARVLLTRVLWL Trigger: CAACCATAAGACTCTAGTCAAAAGCACTCGTGCAGATATGCTGCATATGAGTAAGAAATTGCAATTTTGTAAACATTCCTCGACTTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR GCA 90 bp | GGATTCATAAGGATACGACCGTCCCTATCCTTTGGGGCCTTGGTGGCAAGTTCTTTGGGGTGCAAATACTaGATTATAGTCCCCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: GFIRIRPSLSFGALVASSLGCKY*IIVPSS Trigger: ACTTGAGGGGACTATAATGCAGTATTTGCACCCCAA...AGAACTTGCCACCAAGGCCCCAAAGGATAGGGACGGTCGTATCCTTATGAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR CAA 90 bp | ATTTCTGATTGTCACAGCTTCGGGAAGAAGATTGCTACTGGCATCTaGTGGGGGAGGCCAGAGATAATGCCAAACATTCTAAAATGCACA | + |
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Preference number: 2 (lower is better) Translates to: ISDCHSFGKKIATGI*WGRPEIMPNILKCT Trigger: TGTGCATTTTAGAATGTTTGGCATTATCTCTGGCCTCCCCCACAAGATGCCAGTAGCAATCTTCTTCCCGAAGCTGTGACAATCAGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTGGAGCGCAGCCCAGATaGGGTGTCAGTTTTGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFGAQPR*GVSFVF Trigger: GAACACAAAACTGACACCCCATCTGGGCTGCGCTCC...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CCA 90 bp | GACTTTATGATTTATAAACACAACAAGCTGGAACCCTGTGCCATCTCTATATTCCCTTTGGGGCCTTGGTaGCAAGTTCTTGCTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: DFMIYKHNKLEPCAISIFPLGPW*QVLAWE Trigger: TTCCCAAGCAAGAACTTGCCACCAAGGCCCCAAAGG...GAATATAGAGATGGCACAGGGTTCCAGCTTGTTGTGTTTATAAATCATAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAAGCCCCAGGGGACATTTaGAAATGTCTAAGAGACATT | + |
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Preference number: 2 (lower is better) Translates to: CAMLHPMLLEADGLRVPKAPGDI*KCLRDI Trigger: AATGTCTCTTAGACATTTCCAAATGTCCCCTGGGGC...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR TCA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATATAGTCCCCTCAAGTaGTTCCAGCCTTCCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQYSPLK*FQPSPV Trigger: CACTGGGGAAGGCTGGAATCACTTGAGGGGACTATA...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTATTAGCATACGGTGCTaGCGTGTGGGAAGGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFISIRC*RVGRLL Trigger: AAGCAGCCTTCCCACACGTCAGCACCGTATGCTAAT...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR CAA 90 bp | CTACAGGTATCTCCGATCCTATCTTTGCTGGATTTTTGTTCTGTTTaGTGTGGTATTAGAGTCAGGGTCCTTAACAAGTGGGCAATTTTG | + |
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Preference number: 2 (lower is better) Translates to: LQVSPILSLLDFCSV*CGIRVRVLNKWAIL Trigger: CAAAATTGCCCACTTGTTAAGGACCCTGACTCTAATACCACACAAAACAGAACAAAAATCCAGCAAAGATAGGATCGGAGATACCTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR GCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAAAAGGAACAACCTAATTaGGCAATGCTACATCCAATG | + |
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Preference number: 2 (lower is better) Translates to: CAMLHPMLLEADGLRVPKKEQPN*AMLHPM Trigger: CATTGGATGTAGCATTGCGCAATTAGGTTGTTCCTT...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| 3UTR-3UTR GCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAATGCTTGGCTAATAAATaGCTCTTTATCAGAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: CAMLHPMLLEADGLRVPKCLANK*LFIRTG Trigger: GCCTGTTCTGATAAAGAGGCATTTATTAGCCAAGCA...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCATCTTGTGGGGGAGGCCAGAGATAATGCCAAACATTCTAAAATGCACACAAAACATGCCACTTTaGCTTGTATATTGTCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: TGILWGRPEIMPNILKCTQNMPL*LVYCLD Trigger: ATCTAGACAATATACAAGCCAAAGTGGCATGTTTTG...TGTGCATTTTAGAATGTTTGGCATTATCTCTGGCCTCCCCCACAAGATGCCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR CAA 90 bp | CCACAACAAAGAATAATTTGGCTCAAAATGTCAACTGTGCAGAGGTaGAGAAACTCGCTCTATAAAATCTGGGTCAAAGAGGGTGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PQQRIIWLKMSTVQR*RNSLYKIWVKEGEK Trigger: TTTCTCACCCTCTTTGACCCAGATTTTATAGAGCGAGTTTCTCAACCTCTGCACAGTTGACATTTTGAGCCAAATTATTCTTTGTTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR CAA 90 bp | AACATTCTAAAATGCACAGGACTGCCTACCACAACAAAGAATAATTaGGCTCAAAATGTCAACTGTGCAGAGGTTGAGAAACTCGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: NILKCTGLPTTTKNN*AQNVNCAEVEKLAL Trigger: TAGAGCGAGTTTCTCAACCTCTGCACAGTTGACATTTTGAGCCAAATTATTCTTTGTTGTGGTAGGCAGTCCTGTGCATTTTAGAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTCTCCTTGCTACAAATTaGAGCAAGTTCTTCACCCCC | + |
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Preference number: 2 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFLLATN*SKFFTP Trigger: GGGGGTGAAGAACTTGCTTCAATTTGTAGCAAGGAG...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| 3UTR-3UTR GCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAACTCCGATCCTATCTTTaGTGGATTTTTGTTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: CAMLHPMLLEADGLRVPKLRSYL*WIFVLF Trigger: AAACAGAACAAAAATCCAGCAAAGATAGGATCGGAG...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CCA 90 bp | ACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATGCTACATCCAATGCTTTGAAAGTAATTCCTCCTaGCAGGCAACTAATCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: TTKQIRNNLIAQCYIQCFESNSS*QATNLP Trigger: TGGCAGATTAGTTGCCTGCCAGGAGGAATTACTTTC...AAAGCATTGGATGTAGCATTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAATGTAAATTTAGGGGCTaGGTTACTCTAATTAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: CAMLHPMLLEADGLRVPKCKFRG*VTLIRQ Trigger: TTGCCTAATTAGAGTAACCCAGCCCCTAAATTTACA...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAAATAGAGGGTATAATATaGAAAGTGACTCTAATGGCC | + |
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Preference number: 2 (lower is better) Translates to: CAMLHPMLLEADGLRVPKIEGII*KVTLMA Trigger: GGCCATTAGAGTCACTTTCCATATTATACCCTCTAT...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR GCA 90 bp | AATTGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTTTTTTGCTTTCTCAGTaGTTATACAGGATGTCCATT | + |
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Preference number: 2 (lower is better) Translates to: NCAMLHPMLLEADGLRVPFLLSQ*LYRMSI Trigger: AATGGACATCCTGTATAAGCACTGAGAAAGCAAAAA...AGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCAATT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| 3UTR-3UTR GCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAATACAGCATTTACAAATaGACAAAACATGCCACTTTG | + |
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Preference number: 2 (lower is better) Translates to: CAMLHPMLLEADGLRVPKYSIYK*TKHATL Trigger: CAAAGTGGCATGTTTTGTGCATTTGTAAATGCTGTA...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 |
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| 3UTR-3UTR CCA 90 bp | ACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATGCTACATCCAATGCTTTAGGATGTCCATTCAATaGAGTCAGCGATATGTATTT | + |
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Preference number: 2 (lower is better) Translates to: TTKQIRNNLIAQCYIQCFRMSIQ*SQRYVF Trigger: AAATACATATCGCTGACTCCATTGAATGGACATCCT...AAAGCATTGGATGTAGCATTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTAGGATGTCCATTCAATaGAGTCAGCGATATGTATTT | + |
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Preference number: 2 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFRMSIQ*SQRYVF Trigger: AAATACATATCGCTGACTCCATTGAATGGACATCCT...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| 3UTR-3UTR GCA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATTTTTGCTTTCTCAGTaGTTATACAGGATGTCCATT | + |
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Preference number: 2 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQFLLSQ*LYRMSI Trigger: AATGGACATCCTGTATAAGCACTGAGAAAGCAAAAA...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTCAAATGCACAAAACATaGCACTTTGGCTTGTATATT | + |
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Preference number: 2 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFQMHKT*HFGLYI Trigger: AATATACAAGCCAAAGTGGCATGTTTTGTGCATTTG...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 |
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| 3UTR TCA 72 bp | TCAGCACTCAGGAGGCAGAGACAATACAGATCTCTGTaGGTTCGAAGCCAGCGTGGTCTACAGAGCAATTCC | + |
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Preference number: 3 (lower is better) Translates to: SALRRQRQYRSL*VRSQRGLQSNS Trigger: GGAATTGCTCTGTAGACCACGCTGGCTTCGAACTCACAGAGATCTGTATTGTCTCTGCCTCCTGAGTGCTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR TCA 72 bp | CAAACCGTCCTGTTCCAGCAAATTAGCATACGGTGCTaGCGTGTGGGAAGGCTGCTTCCTCTAGCTGTTCAT | + |
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Preference number: 3 (lower is better) Translates to: QTVLFQQISIRC*RVGRLLPLAVH Trigger: ATGAACAGCTAGAGGAAGCAGCCTTCCCACACGTCAGCACCGTATGCTAATTTGCTGGAACAGGACGGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CAA 90 bp | GACACATGGAAAAATCCACACTTGTGTTGGACCTTCTCAGTTGGTCCTAACATCGACCGTCCCTATCCTTaGGGGCCTTGGTGGCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: DTWKNPHLCWTFSVGPNIDRPYP*GPWWQV Trigger: AACTTGCCACCAAGGCCCCAAAGGATAGGGACGGTC...GATGTTAGGACCAACTGAGAAGGTCCAACACAAGTGTGGATTTTTCCATGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CAA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAACTTGGTGGCAAGTTCTaGCTTGGGAACCTCATTCTG | + |
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Preference number: 3 (lower is better) Translates to: CAMLHPMLLEADGLRVPKLGGKF*LGNLIL Trigger: CAGAATGAGGTTCCCAAGCAAGAACTTGCCACCAAG...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR TCA 72 bp | TTGGCTCAAAACGAACCTCTGGGAAATGGGTTCTCATaGACTGAGACTGGAAAGGAAAACTGTCATTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LAQNEPLGNGFS*TETGKENCHSQ Trigger: CTGGGAATGACAGTTTTCCTTTCCAGTCTCAGTTCATGAGAACCCATTTCCCAGAGGTTCGTTTTGAGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR TCA 72 bp | GCCAGAAGCCACACAAAGCAACTAAAGCTACAGGTGTaGTGGCTAGTTAGAAAGAACTCCCATCCAATTCGA | + |
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Preference number: 3 (lower is better) Translates to: ARSHTKQLKLQV*WLVRKNSHPIR Trigger: TCGAATTGGATGGGAGTTCTTTCTAACTAGCCATCACACCTGTAGCTTTAGTTGCTTTGTGTGGCTTCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CAA 90 bp | GACACATGGAAAAATCCACACTTGTGTTGGACCTTCTCAGTTGGTCCTAACATCGATGGGGTGTCAGTTTaGTGTTCTTCCTCATTAACC | + |
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Preference number: 3 (lower is better) Translates to: DTWKNPHLCWTFSVGPNIDGVSV*CSSSLT Trigger: GGTTAATGAGGAAGAACACAAAACTGACACCCCATC...GATGTTAGGACCAACTGAGAAGGTCCAACACAAGTGTGGATTTTTCCATGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CAA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAAAAATCCACACTTGTGTaGGACCTTCTCAGTTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: CAMLHPMLLEADGLRVPKKSTLV*DLLSWS Trigger: GGACCAACTGAGAAGGTCCAACACAAGTGTGGATTT...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR TCA 72 bp | GCCTTGGTGGCAAGTTCTTGCTTGGGAACCTCATTCTaGTTCCACTTTAAGGTAAATATCTTGGGGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: ALVASSCLGTSF*FHFKVNILGCK Trigger: TTTGCACCCCAAGATATTTACCTTAAAGTGGAATCAGAATGAGGTTCCCAAGCAAGAACTTGCCACCAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR CCA 72 bp | TGGTTCAAAATAGGCTATTGGCTCAAAACGAACCTCTaGGAAATGGGTTCTCATGAACTGAGACTGGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: WFKIGYWLKTNL*EMGSHELRLER Trigger: CCTTTCCAGTCTCAGTTCATGAGAACCCATTTCCCAGAGGTTCGTTTTGAGCCAATAGCCTATTTTGAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CAA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAATCTCCTTGCTACAAATaGAAGCAAGTTCTTCACCCC | + |
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Preference number: 3 (lower is better) Translates to: CAMLHPMLLEADGLRVPKSPCYK*KQVLHP Trigger: GGGGTGAAGAACTTGCTTCAATTTGTAGCAAGGAGA...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTCCACCCCCACCCAGGTaGCTTCTCTTTATGCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFPPPPR*LLFMQV Trigger: GACTTGCATAAAGAGAAGCAACCTGGGTGGGGGTGG...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| 3UTR GCA 72 bp | TTCCACTTTAAGGTAAATATCTTGGGGTGCAAATACTaGATTATAGTCCCCTCAAGTGATTCCAGCCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: FHFKVNILGCKY*IIVPSSDSSLP Trigger: GGGAAGGCTGGAATCACTTGAGGGGACTATAATGCAGTATTTGCACCCCAAGATATTTACCTTAAAGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
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| 3UTR-3UTR CAA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAATCATGTATATCTTCCTaGCTTCATAAAGCAGTGATG | + |
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Preference number: 3 (lower is better) Translates to: CAMLHPMLLEADGLRVPKSCISS*LHKAVM Trigger: CATCACTGCTTTATGAAGCAAGGAAGATATACATGA...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| 3UTR-3UTR CAA 90 bp | AATTGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTTCATGTATATCTTCCTaGCTTCATAAAGCAGTGATG | + |
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Preference number: 3 (lower is better) Translates to: NCAMLHPMLLEADGLRVPSCISS*LHKAVM Trigger: CATCACTGCTTTATGAAGCAAGGAAGATATACATGA...AGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| 3UTR-3UTR CAA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAAACAAAACATGCCACTTaGGCTTGTATATTGTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: CAMLHPMLLEADGLRVPKTKHAT*ACILSR Trigger: TCTAGACAATATACAAGCCAAAGTGGCATGTTTTGT...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 |
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| 3UTR CCA 72 bp | GAGATTTTTGACACATGGAAAAATCCACACTTGTGTTaGACCTTCTCAGTTGGTCCTAACATCTACTATCCA | + |
|
Preference number: 3 (lower is better) Translates to: EIFDTWKNPHLC*TFSVGPNIYYP Trigger: TGGATAGTAGATGTTAGGACCAACTGAGAAGGTCCAACACAAGTGTGGATTTTTCCATGTGTCAAAAATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTTCTCCTTGCTACAAATaGAAGCAAGTTCTTCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFSPCYK*KQVLHP Trigger: GGGGTGAAGAACTTGCTTCAATTTGTAGCAAGGAGA...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTTCATGTATATCTTCCTaGCTTCATAAAGCAGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFSCISS*LHKAVM Trigger: CATCACTGCTTTATGAAGCAAGGAAGATATACATGA...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATCCTGGCGGCTCCCGCTaGCATCCTGGCTCTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CFCFLSAYTGCPFNGVSDPGGSR*HPGSPA Trigger: CGCAGGAGAGCCAGGATGTCAGCGGGAGCCGCCAGG...ATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCCTTGCTACAAATTGAAGCAAGTTCTTCACCCCCATGCTGACTCCTCACTCCCGCTGACATCCTaGCTCTCCTGCGCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FSPCYKLKQVLHPHADSSLPLTS*LSCAST Trigger: GGTGCTGGCGCAGGAGAGCCAGGATGTCAGCGGGAG...TGAGGAGTCAGCATGGGGGTGAAGAACTTGCTTCAATTTGTAGCAAGGAGAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR TCA 90 bp | GGATTCATAAGGATACGACCGTCCCTATCCTTTGGGGCCTTGGTGGCAAGTTCTCGGGTTAGTTCTTCATaGTTGACCGGGCCGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFIRIRPSLSFGALVASSRVSSS*LTGPKR Trigger: TCTCTTCGGCCCGGTCAATCATGAAGAACTAACCCG...AGAACTTGCCACCAAGGCCCCAAAGGATAGGGACGGTCGTATCCTTATGAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| CDS-3UTR GCA 90 bp | GACACATGGAAAAATCCACACTTGTGTTGGACCTTCTCAGTTGGTCCTAACATCGCGTCTGCTCCACAGTaGCAGCGTTCGGGGAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: DTWKNPHLCWTFSVGPNIASAPQ*QRSGNR Trigger: ACGGTTCCCCGAACGCTGGCACTGTGGAGCAGACGC...GATGTTAGGACCAACTGAGAAGGTCCAACACAAGTGTGGATTTTTCCATGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| CDS-3UTR CCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAACTCCCGCTGACATCCTaGCTCTCCTGCGCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CAMLHPMLLEADGLRVPKLPLTS*LSCAST Trigger: GGTGCTGGCGCAGGAGAGCCAGGATGTCAGCGGGAG...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGCATCTTGTGGGGGAGGCCAGAGATAATGCCAAACATTCTAAAATGCACAATTAAAGGCACCGCCTaGCGGCTCCCGCTGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: TGILWGRPEIMPNILKCTIKGTA*RLPLTS Trigger: GGATGTCAGCGGGAGCCGCCAGGCGGTGCCTTTAAT...TGTGCATTTTAGAATGTTTGGCATTATCTCTGGCCTCCCCCACAAGATGCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| CDS-3UTR TCA 90 bp | ACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATGCTACATCCAATGCTTTCCTGGCGGCTCCCGCTaGCATCCTGGCTCTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TTKQIRNNLIAQCYIQCFPGGSR*HPGSPA Trigger: CGCAGGAGAGCCAGGATGTCAGCGGGAGCCGCCAGG...AAAGCATTGGATGTAGCATTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | AATTGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTCCCCTCTCCACCTCCTaGCACTCGTATCTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCAMLHPMLLEADGLRVPPLSTS*HSYLPS Trigger: GGAGGGCAGATACGAGTGGCAGGAGGTGGAGAGGGG...AGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | AATTGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAGAACTCGGGCAAGCTaGCCCTCTCCACCTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NCAMLHPMLLEADGLRVPRTRAS*PSPPPA Trigger: GGCAGGAGGTGGAGAGGGGCAGCTTGCCCGAGTTCT...AGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | GACACATGGAAAAATCCACACTTGTGTTGGACCTTCTCAGTTGGTCCTAACATCGGCTTCTTGGGCGTCTaGTCCACAGTGCCAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DTWKNPHLCWTFSVGPNIGFLGV*STVPAF Trigger: GAACGCTGGCACTGTGGAGCAGACGCCCAAGAAGCC...GATGTTAGGACCAACTGAGAAGGTCCAACACAAGTGTGGATTTTTCCATGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| CDS-3UTR GCA 90 bp | TTTTCTCCTTGCTACAAATTGAAGCAAGTTCTTCACCCCCATGCTGACTCCTCAGGCTTCTTGGGCGTCTaGTCCACAGTGCCAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSPCYKLKQVLHPHADSSGFLGV*STVPAF Trigger: GAACGCTGGCACTGTGGAGCAGACGCCCAAGAAGCC...TGAGGAGTCAGCATGGGGGTGAAGAACTTGCTTCAATTTGTAGCAAGGAGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATGGTGCTCCGCTTGTCTaGCGTCCATCCGCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFCFLSAYTGCPFNGVSDGAPLV*RPSAPG Trigger: GCCTGGAGCGGATGGACGCCAGACAAGCGGAGCACC...ATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | AATTGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTGAAGGCCGGGCTTCTTaGGCGTCTGCTCCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NCAMLHPMLLEADGLRVPEGRAS*ASAPQC Trigger: GCACTGTGGAGCAGACGCCCAAGAAGCCCGGCCTTC...AGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATATGTAGAACTCGGGCAAGCTaGCCCTCTCCACCTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FAFSVLIQDVHSMESAICRTRAS*PSPPPA Trigger: GGCAGGAGGTGGAGAGGGGCAGCTTGCCCGAGTTCT...ACATATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATGCGTCTGCTCCACAGTaGCAGCGTTCGGGGAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: CFCFLSAYTGCPFNGVSDASAPQ*QRSGNR Trigger: ACGGTTCCCCGAACGCTGGCACTGTGGAGCAGACGC...ATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATTGCAGGCGGAAGGCTTaGGGTGCTCCGCTTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFCFLSAYTGCPFNGVSDCRRKA*GAPLVW Trigger: CCAGACAAGCGGAGCACCCCAAGCCTTCCGCCTGCA...ATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATATGTGGCTTCTTGGGCGTCTaGTCCACAGTGCCAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FAFSVLIQDVHSMESAICGFLGV*STVPAF Trigger: GAACGCTGGCACTGTGGAGCAGACGCCCAAGAAGCC...ACATATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATATTAAAGGCACCGCCTaGCGGCTCCCGCTGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: CFCFLSAYTGCPFNGVSDIKGTA*RLPLTS Trigger: GGATGTCAGCGGGAGCCGCCAGGCGGTGCCTTTAAT...ATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| 3UTR CAA 72 bp | TGTCACAGCTTCGGGAAGAAGATTGCTACTGGCATCTaGTGGGGGAGGCCAGAGATAATGCCAAACATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CHSFGKKIATGI*WGRPEIMPNIL Trigger: TAGAATGTTTGGCATTATCTCTGGCCTCCCCCACAAGATGCCAGTAGCAATCTTCTTCCCGAAGCTGTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCCTTGCTACAAATTGAAGCAAGTTCTTCACCCCCATGCTGACTCCTCACGGGTTAGTTCTTCATaGTTGACCGGGCCGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSPCYKLKQVLHPHADSSRVSSS*LTGPKR Trigger: TCTCTTCGGCCCGGTCAATCATGAAGAACTAACCCG...TGAGGAGTCAGCATGGGGGTGAAGAACTTGCTTCAATTTGTAGCAAGGAGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAATCCATATCCCGGCAGTaGTTCTCCAAGTCCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CAMLHPMLLEADGLRVPKSISRQ*FSKSRV Trigger: AACCCGGGACTTGGAGAAGCACTGCCGGGATATGGA...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | ACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATGCTACATCCAATGCTTTCCCCTCTCCACCTCCTaGCACTCGTATCTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTKQIRNNLIAQCYIQCFPLSTS*HSYLPS Trigger: GGAGGGCAGATACGAGTGGCAGGAGGTGGAGAGGGG...AAAGCATTGGATGTAGCATTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAAGGTGCTCCGCTTGTCTaGCGTCCATCCGCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQGAPLV*RPSAPG Trigger: GCCTGGAGCGGATGGACGCCAGACAAGCGGAGCACC...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | GACTTTATGATTTATAAACACAACAAGCTGGAACCCTGTGCCATCTCTATATTCTGCAGGCGGAAGGCTTaGGGTGCTCCGCTTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DFMIYKHNKLEPCAISIFCRRKA*GAPLVW Trigger: CCAGACAAGCGGAGCACCCCAAGCCTTCCGCCTGCA...GAATATAGAGATGGCACAGGGTTCCAGCTTGTTGTGTTTATAAATCATAAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| CDS-3UTR CCA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAACTCCCGCTGACATCCTaGCTCTCCTGCGCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQLPLTS*LSCAST Trigger: GGTGCTGGCGCAGGAGAGCCAGGATGTCAGCGGGAG...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAAGCGTCTGCTCCACAGTaGCAGCGTTCGGGGAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQASAPQ*QRSGNR Trigger: ACGGTTCCCCGAACGCTGGCACTGTGGAGCAGACGC...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATGCAGGCGGAAGGCTTaGGGTGCTCCGCTTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQCRRKA*GAPLVW Trigger: CCAGACAAGCGGAGCACCCCAAGCCTTCCGCCTGCA...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAAGAAGGCCGGGCTTCTTaGGCGTCTGCTCCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQEGRAS*ASAPQC Trigger: GCACTGTGGAGCAGACGCCCAAGAAGCCCGGCCTTC...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTGAAGGCCGGGCTTCTTaGGCGTCTGCTCCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFEGRAS*ASAPQC Trigger: GCACTGTGGAGCAGACGCCCAAGAAGCCCGGCCTTC...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATATGTCGGGTTAGTTCTTCATaGTTGACCGGGCCGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FAFSVLIQDVHSMESAICRVSSS*LTGPKR Trigger: TCTCTTCGGCCCGGTCAATCATGAAGAACTAACCCG...ACATATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR TCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAATCCTCAGAGTTTGCCTaGGACCCAATTAAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CAMLHPMLLEADGLRVPKSSEFA*DPIKGT Trigger: GGTGCCTTTAATTGGGTCTCAGGCAAACTCTGAGGA...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAAATTTGGTCCACCAAATaGCGGTCCTCAGAGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CAMLHPMLLEADGLRVPKIWSTK*RSSEFA Trigger: GGCAAACTCTGAGGACCGGCATTTGGTGGACCAAAT...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | AATTGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTATTTGGTCCACCAAATaGCGGTCCTCAGAGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NCAMLHPMLLEADGLRVPIWSTK*RSSEFA Trigger: GGCAAACTCTGAGGACCGGCATTTGGTGGACCAAAT...AGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTCCTTGCTACAAATTGAAGCAAGTTCTTCACCCCCATGCTGACTCCTCACGAAGAAGAATCTTCTaGAGCAGGTCGCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSPCYKLKQVLHPHADSSRRRIF*SRSLPH Trigger: ATGAGGAAGCGACCTGCTGCAGAAGATTCTTCTTCG...TGAGGAGTCAGCATGGGGGTGAAGAACTTGCTTCAATTTGTAGCAAGGAGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTATTAAAGGCACCGCCTaGCGGCTCCCGCTGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFIKGTA*RLPLTS Trigger: GGATGTCAGCGGGAGCCGCCAGGCGGTGCCTTTAAT...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR TCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAAAAATTCCACTTGCGCTaGCTCGCTTCTTCCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: CAMLHPMLLEADGLRVPKKFHLR*LASSIS Trigger: GGATATGGAAGAAGCGAGTCAGCGCAAGTGGAATTT...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR TCA 90 bp | AATTGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAATTCCACTTGCGCTaGCTCGCTTCTTCCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: NCAMLHPMLLEADGLRVPKFHLR*LASSIS Trigger: GGATATGGAAGAAGCGAGTCAGCGCAAGTGGAATTT...AGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | ACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATGCTACATCCAATGCTTTTCCATATCCCGGCAGTaGTTCTCCAAGTCCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTKQIRNNLIAQCYIQCFSISRQ*FSKSRV Trigger: AACCCGGGACTTGGAGAAGCACTGCCGGGATATGGA...AAAGCATTGGATGTAGCATTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATATTTGGTCCACCAAATaGCGGTCCTCAGAGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CFCFLSAYTGCPFNGVSDIWSTK*RSSEFA Trigger: GGCAAACTCTGAGGACCGGCATTTGGTGGACCAAAT...ATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR TCA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAAGTTCGGGGAACCGTCTaGAACATTTTCTTCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CAMLHPMLLEADGLRVPKVRGTV*NIFFCS Trigger: AGAACAGAAGAAAATGTTTCAGACGGTTCCCCGAAC...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATAGTCGAAATTCCACTTaGGCTGACTCGCTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CFCFLSAYTGCPFNGVSDSRNST*ADSLLP Trigger: TGGAAGAAGCGAGTCAGCGCAAGTGGAATTTCGACT...ATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATATGTAGTCGAAATTCCACTTaGGCTGACTCGCTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FAFSVLIQDVHSMESAICSRNST*ADSLLP Trigger: TGGAAGAAGCGAGTCAGCGCAAGTGGAATTTCGACT...ACATATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATCGAAGAAGAATCTTCTaGAGCAGGTCGCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFCFLSAYTGCPFNGVSDRRRIF*SRSLPH Trigger: ATGAGGAAGCGACCTGCTGCAGAAGATTCTTCTTCG...ATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR TCA 90 bp | ACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATGCTACATCCAATGCTTTTCCTCAGAGTTTGCCTaGGACCCAATTAAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TTKQIRNNLIAQCYIQCFSSEFA*DPIKGT Trigger: GGTGCCTTTAATTGGGTCTCAGGCAAACTCTGAGGA...AAAGCATTGGATGTAGCATTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATATGTGTTCGGGGAACCGTCTaGAACATTTTCTTCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FAFSVLIQDVHSMESAICVRGTV*NIFFCS Trigger: AGAACAGAAGAAAATGTTTCAGACGGTTCCCCGAAC...ACATATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| 3UTR CAA 72 bp | GGTGATGAGATTTTTGACACATGGAAAAATCCACACTaGTGTTGGACCTTCTCAGTTGGTCCTAACATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GDEIFDTWKNPH*CWTFSVGPNIY Trigger: GTAGATGTTAGGACCAACTGAGAAGGTCCAACACAAGTGTGGATTTTTCCATGTGTCAAAAATCTCATCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| CDS-3UTR TCA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATCCTCAGAGTTTGCCTaGGACCCAATTAAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQSSEFA*DPIKGT Trigger: GGTGCCTTTAATTGGGTCTCAGGCAAACTCTGAGGA...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR GCA 90 bp | ACAACAAAGCAAATAAGGAACAACCTAATTGCGCAATGCTACATCCAATGCTTTAGTCGAAATTCCACTTaGGCTGACTCGCTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTKQIRNNLIAQCYIQCFSRNST*ADSLLP Trigger: TGGAAGAAGCGAGTCAGCGCAAGTGGAATTTCGACT...AAAGCATTGGATGTAGCATTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| 3UTR CAA 72 bp | CATGGAAAAATCCACACTTGTGTTGGACCTTCTCAGTaGGTCCTAACATCTACTATCCATTTCCCCTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: HGKIHTCVGPSQ*VLTSTIHFPYK Trigger: TTTATAGGGGAAATGGATAGTAGATGTTAGGACCAACTGAGAAGGTCCAACACAAGTGTGGATTTTTCCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| 3UTR CAA 72 bp | AGAATAATTTGGCTCAAAATGTCAACTGTGCAGAGGTaGAGAAACTCGCTCTATAAAATCTGGGTCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RIIWLKMSTVQR*RNSLYKIWVKE Trigger: CTCTTTGACCCAGATTTTATAGAGCGAGTTTCTCAACCTCTGCACAGTTGACATTTTGAGCCAAATTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| CDS GCA 90 bp | ACGTCTGGCGTCGAAGGCCGGGCTTCTTGGGCGTCTGCTCCACAGTaGCAGCGTTCGGGGAACCGTCTGAAACATTTTCTTCTGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSGVEGRASWASAPQ*QRSGNRLKHFLLFC Trigger: ACAGAACAGAAGAAAATGTTTCAGACGGTTCCCCGAACGCTGGCACTGTGGAGCAGACGCCCAAGAAGCCCGGCCTTCGACGCCAGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS TCA 90 bp | TATCCCGGCAGTGCTTCTCCAAGTCCCGGGTTAGTTCTTCATGATTaGCCGGGCCGAAGAGATTTCTGCAGGCGGAAGGCTTGGGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YPGSASPSPGLVLHD*PGRRDFCRRKAWGA Trigger: AGCACCCCAAGCCTTCCGCCTGCAGAAATCTCTTCGGCCCGGTCAATCATGAAGAACTAACCCGGGACTTGGAGAAGCACTGCCGGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS TCA 90 bp | TCCATATCCCGGCAGTGCTTCTCCAAGTCCCGGGTTAGTTCTTCATaGTTGACCGGGCCGAAGAGATTTCTGCAGGCGGAAGGCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SISRQCFSKSRVSSS*LTGPKRFLQAEGLG Trigger: CCCCAAGCCTTCCGCCTGCAGAAATCTCTTCGGCCCGGTCAATCATGAAGAACTAACCCGGGACTTGGAGAAGCACTGCCGGGATATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS GCA 90 bp | AGAACTCGGGCAAGCTGCCCCTCTCCACCTCCTGCCACTCGTATCTaGCCTCCAGGGGCTTATGATTCTGAAAGTCGAAATTCCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RTRASCPSPPPATRI*PPGAYDSESRNSTC Trigger: GCAAGTGGAATTTCGACTTTCAGAATCATAAGCCCCTGGAGGGCAGATACGAGTGGCAGGAGGTGGAGAGGGGCAGCTTGCCCGAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS GCA 90 bp | GAAGAAGAATCTTCTGCAGCAGGTCGCTTCCTCATCCCTGGACACTaGTCCGCTAACCCAGCCGGATTGTCTGACGAGTCAGGCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EEESSAAGRFLIPGH*SANPAGLSDESGIW Trigger: CCAAATGCCTGACTCGTCAGACAATCCGGCTGGGTTAGCGGAGCAGTGTCCAGGGATGAGGAAGCGACCTGCTGCAGAAGATTCTTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGCATCTTGTGGGGGAGGCCAGAGATAATGCCAAACATTCTAAAATGCACACGAAGGCCGGGCTTCTaGGGCGTCTGCTCCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGILWGRPEIMPNILKCTRRPGF*GVCSTV Trigger: CACTGTGGAGCAGACGCCCAAGAAGCCCGGCCTTCG...TGTGCATTTTAGAATGTTTGGCATTATCTCTGGCCTCCCCCACAAGATGCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| CDS-3UTR CAA 90 bp | AATTGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTCTTGGGGTGCTCCGCTaGTCTGGCGTCCATCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NCAMLHPMLLEADGLRVPLGVLR*SGVHPL Trigger: GAGCGGATGGACGCCAGACAAGCGGAGCACCCCAAG...AGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | TGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTAAACTGCAGGCGGAAGGCTaGGGGTGCTCCGCTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CAMLHPMLLEADGLRVPKLQAEG*GCSACL Trigger: CAGACAAGCGGAGCACCCCAAGCCTTCCGCCTGCAG...TTTAGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS GCA 90 bp | ATCTGCCCTCCAGGGGCTTATGATTCTGAAAGTCGAAATTCCACTTaGGCTGACTCGCTTCTTCCATATCCCGGCAGTGCTTCTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ICPPGAYDSESRNST*ADSLLPYPGSASPS Trigger: ACTTGGAGAAGCACTGCCGGGATATGGAAGAAGCGAGTCAGCGCAAGTGGAATTTCGACTTTCAGAATCATAAGCCCCTGGAGGGCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| CDS-3UTR CAA 90 bp | TGTTTTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATCTGCAGGCGGAAGGCTaGGGGTGCTCCGCTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CFCFLSAYTGCPFNGVSDLQAEG*GCSACL Trigger: CAGACAAGCGGAGCACCCCAAGCCTTCCGCCTGCAG...ATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATCGAAGGCCGGGCTTCTaGGGCGTCTGCTCCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CFCFLSAYTGCPFNGVSDRRPGF*GVCSTV Trigger: CACTGTGGAGCAGACGCCCAAGAAGCCCGGCCTTCG...ATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTCTTGGGGTGCTCCGCTaGTCTGGCGTCCATCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFLGVLR*SGVHPL Trigger: GAGCGGATGGACGCCAGACAAGCGGAGCACCCCAAG...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAACTGCAGGCGGAAGGCTaGGGGTGCTCCGCTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQLQAEG*GCSACL Trigger: CAGACAAGCGGAGCACCCCAAGCCTTCCGCCTGCAG...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAACGAAGGCCGGGCTTCTaGGGCGTCTGCTCCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQRRPGF*GVCSTV Trigger: CACTGTGGAGCAGACGCCCAAGAAGCCCGGCCTTCG...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | AATTGCGCAATGCTACATCCAATGCTTTTAGAGGCAGATGGTTTAAGAGTGCCTGCCGGTCCTCAGAGTTaGCCTGAGACCCAATTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NCAMLHPMLLEADGLRVPAGPQS*PETQLK Trigger: CTTTAATTGGGTCTCAGGCAAACTCTGAGGACCGGC...AGGCACTCTTAAACCATCTGCCTCTAAAAGCATTGGATGTAGCATTGCGCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATATGTGCCGGTCCTCAGAGTTaGCCTGAGACCCAATTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FAFSVLIQDVHSMESAICAGPQS*PETQLK Trigger: CTTTAATTGGGTCTCAGGCAAACTCTGAGGACCGGC...ACATATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | GACACATGGAAAAATCCACACTTGTGTTGGACCTTCTCAGTTGGTCCTAACATCGTTGGCCCTTTTGTTTaGCGAAGAAGAATCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DTWKNPHLCWTFSVGPNIVGPFV*RRRIFC Trigger: GCAGAAGATTCTTCTTCGCAAAACAAAAGGGCCAAC...GATGTTAGGACCAACTGAGAAGGTCCAACACAAGTGTGGATTTTTCCATGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067327.11 |
||
| CDS-3UTR CAA 90 bp | TTTTCTCCTTGCTACAAATTGAAGCAAGTTCTTCACCCCCATGCTGACTCCTCAGTTCTGTTGGCCCTTTaGTTTTGCGAAGAAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: FSPCYKLKQVLHPHADSSVLLAL*FCEEES Trigger: AGATTCTTCTTCGCAAAACAAAAGGGCCAACAGAAC...TGAGGAGTCAGCATGGGGGTGAAGAACTTGCTTCAATTTGTAGCAAGGAGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | ACTATATACACAGGTAGTACAACAAAGCAAATAAGGAACAACCTAATTGCGCAAGCCGGTCCTCAGAGTTaGCCTGAGACCCAATTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TIYTGSTTKQIRNNLIAQAGPQS*PETQLK Trigger: CTTTAATTGGGTCTCAGGCAAACTCTGAGGACCGGC...TTGCGCAATTAGGTTGTTCCTTATTTGCTTTGTTGTACTACCTGTGTATATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTCTCAGTGCTTATACAGGATGTCCATTCAATGGAGTCAGCGATATGTGTTGGCCCTTTTGTTTaGCGAAGAAGAATCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FAFSVLIQDVHSMESAICVGPFV*RRRIFC Trigger: GCAGAAGATTCTTCTTCGCAAAACAAAAGGGCCAAC...ACATATCGCTGACTCCATTGAATGGACATCCTGTATAAGCACTGAGAAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTGTTGGCCCTTTTGTTTaGCGAAGAAGAATCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFVGPFV*RRRIFC Trigger: GCAGAAGATTCTTCTTCGCAAAACAAAAGGGCCAAC...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGATAATCAAATCTAAGAATTCAGAATTCCCTATTATGCACCCCAGATTTGTTCTGTTGGCCCTTTaGTTTTGCGAAGAAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SGIIKSKNSEFPIMHPRFVLLAL*FCEEES Trigger: AGATTCTTCTTCGCAAAACAAAAGGGCCAACAGAAC...AAATCTGGGGTGCATAATAGGGAATTCTGAATTCTTAGATTTGATTATCCCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS CAA 90 bp | CGGGCCGAAGAGATTTCTGCAGGCGGAAGGCTTGGGGTGCTCCGCTaGTCTGGCGTCCATCCGCTCCAGGCTCGGGCTCCCGTTAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: RAEEISAGGRLGVLR*SGVHPLQARAPVRH Trigger: GTGTCTAACGGGAGCCCGAGCCTGGAGCGGATGGACGCCAGACAAGCGGAGCACCCCAAGCCTTCCGCCTGCAGAAATCTCTTCGGCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS GCA 72 bp | GGGCCGAAGAGATTTCTGCAGGCGGAAGGCTTGGGGTaGTCCGCTTGTCTGGCGTCCATCCGCTCCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPKRFLQAEGLG*SACLASIRSRL Trigger: GAGCCTGGAGCGGATGGACGCCAGACAAGCGGAGCACCCCAAGCCTTCCGCCTGCAGAAATCTCTTCGGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS GCA 72 bp | TACGTCTGGCGTCGAAGGCCGGGCTTCTTGGGCGTCTaGTCCACAGTGCCAGCGTTCGGGGAACCGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: YVWRRRPGFLGV*STVPAFGEPSE Trigger: TTCAGACGGTTCCCCGAACGCTGGCACTGTGGAGCAGACGCCCAAGAAGCCCGGCCTTCGACGCCAGACGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS CAA 72 bp | TTGACCGGGCCGAAGAGATTTCTGCAGGCGGAAGGCTaGGGGTGCTCCGCTTGTCTGGCGTCCATCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LTGPKRFLQAEG*GCSACLASIRS Trigger: GGAGCGGATGGACGCCAGACAAGCGGAGCACCCCAAGCCTTCCGCCTGCAGAAATCTCTTCGGCCCGGTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS CAA 90 bp | GGTCGCTTCCTCATCCCTGGACACTGCTCCGCTAACCCAGCCGGATaGTCTGACGAGTCAGGCATTTGGTCCACCAAATGCCGGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GRFLIPGHCSANPAG*SDESGIWSTKCRSS Trigger: TGAGGACCGGCATTTGGTGGACCAAATGCCTGACTCGTCAGACAATCCGGCTGGGTTAGCGGAGCAGTGTCCAGGGATGAGGAAGCGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS GCA 72 bp | TCTTCTGCAGCAGGTCGCTTCCTCATCCCTGGACACTaGTCCGCTAACCCAGCCGGATTGTCTGACGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSAAGRFLIPGH*SANPAGLSDES Trigger: TGACTCGTCAGACAATCCGGCTGGGTTAGCGGAGCAGTGTCCAGGGATGAGGAAGCGACCTGCTGCAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS GCA 72 bp | GTCGAAGGCCGGGCTTCTTGGGCGTCTGCTCCACAGTaGCAGCGTTCGGGGAACCGTCTGAAACATTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VEGRASWASAPQ*QRSGNRLKHFL Trigger: AAGAAAATGTTTCAGACGGTTCCCCGAACGCTGGCACTGTGGAGCAGACGCCCAAGAAGCCCGGCCTTCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS CAA 72 bp | CTCATCCCTGGACACTGCTCCGCTAACCCAGCCGGATaGTCTGACGAGTCAGGCATTTGGTCCACCAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: LIPGHCSANPAG*SDESGIWSTKC Trigger: GCATTTGGTGGACCAAATGCCTGACTCGTCAGACAATCCGGCTGGGTTAGCGGAGCAGTGTCCAGGGATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS TCA 72 bp | CGGCAGTGCTTCTCCAAGTCCCGGGTTAGTTCTTCATaGTTGACCGGGCCGAAGAGATTTCTGCAGGCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RQCFSKSRVSSS*LTGPKRFLQAE Trigger: TTCCGCCTGCAGAAATCTCTTCGGCCCGGTCAATCATGAAGAACTAACCCGGGACTTGGAGAAGCACTGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
||
| CDS TCA 72 bp | AGTGCTTCTCCAAGTCCCGGGTTAGTTCTTCATGATTaGCCGGGCCGAAGAGATTTCTGCAGGCGGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SASPSPGLVLHD*PGRRDFCRRKA Trigger: AGCCTTCCGCCTGCAGAAATCTCTTCGGCCCGGTCAATCATGAAGAACTAACCCGGGACTTGGAGAAGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| CDS GCA 72 bp | CCAGGGGCTTATGATTCTGAAAGTCGAAATTCCACTTaGGCTGACTCGCTTCTTCCATATCCCGGCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PGAYDSESRNST*ADSLLPYPGSA Trigger: AGCACTGCCGGGATATGGAAGAAGCGAGTCAGCGCAAGTGGAATTTCGACTTTCAGAATCATAAGCCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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| CDS GCA 72 bp | TCTGTTGGCCCTTTTGTTTTGCGAAGAAGAATCTTCTaGAGCAGGTCGCTTCCTCATCCCTGGACACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SVGPFVLRRRIF*SRSLPHPWTLL Trigger: GAGCAGTGTCCAGGGATGAGGAAGCGACCTGCTGCAGAAGATTCTTCTTCGCAAAACAAAAGGGCCAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003115.9 ENSMUST00000067327.11 ENSMUST00000204807.2 |
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