Pregenerated sensors for CDK9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009555Ensembl transcript IDs: ENSMUST00000009699.16, ENSMUST00000120105.8, ENSMUST00000123170.8, ENSMUST00000154131.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCGTCTGGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTaGTGGGTGATCTGGCTGCCCTTCCGCCGTGGCGGTGCCAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: SVWLVVAGFLLWLVD*WVIWLPFRRGGARY Trigger: GTACCTGGCACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR CCA 90 bp | ATGCCCTTGAGGTCCGAGGGCATGGGGTCCGACCAGAAGAAGTCGTaGTTGAGGGCATCGTCACTGTCAATCCGCTGCGCGGGGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: MPLRSEGMGSDQKKS*LRASSLSIRCAGSS Trigger: GCTGGACCCCGCGCAGCGGATTGACAGTGACGATGCCCTCAACCACGACTTCTTCTGGTCGGACCCCATGCCCTCGGACCTCAAGGGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR CCA 90 bp | GTCTGGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTGCTaGGTGATCTGGCTGCCCTTCCGCCGTGGCGGTGCCAGGTACTCA | + |
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Preference number: 1 (lower is better) Translates to: VWLVVAGFLLWLVDC*VIWLPFRRGGARYS Trigger: TGAGTACCTGGCACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR TCA 90 bp | AAGTCACAGTGGGTGAGCCTCTCCCACCTCACTTTGTGTCCACGCTaGGACCTCCAGAGAGGGGCAGGCAGGATAGCTCCACCCCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: KSQWVSLSHLTLCPR*DLQRGAGRIAPPQP Trigger: GGGCTGGGGTGGAGCTATCCTGCCTGCCCCTCTCTGGAGGTCTCAGCGTGGACACAAAGTGAGGTGGGAGAGGCTCACCCACTGTGACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| 3UTR TCA 90 bp | CACTGTCAATCCGCTGCGCGGGGTCCAGCACCAGCAGCTTGTCAATaGGGTCCAGAGCATAGGGGTCGCGCACGTAGGCCTTCAGACGGT | + |
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Preference number: 1 (lower is better) Translates to: HCQSAARGPAPAACQ*GPEHRGRARRPSDG Trigger: ACCGTCTGAAGGCCTACGTGCGCGACCCCTATGCTCTGGACCTCATTGACAAGCTGCTGGTGCTGGACCCCGCGCAGCGGATTGACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR TCA 90 bp | GGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTGCTGGGTaGTCTGGCTGCCCTTCCGCCGTGGCGGTGCCAGGTACTCAAACA | + |
|
Preference number: 1 (lower is better) Translates to: GWWWRDFCSGWWTAG*SGCPSAVAVPGTQT Trigger: TGTTTGAGTACCTGGCACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR TCA 90 bp | CCCTTCCGCCGTGGCGGTGCCAGGTACTCAAACATAGACGTCAAGTaGGTAGACAGCATGCCCTTGAGGTCCGAGGGCATGGGGTCCGAC | + |
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Preference number: 1 (lower is better) Translates to: PFRRGGARYSNIDVK*VDSMPLRSEGMGSD Trigger: GTCGGACCCCATGCCCTCGGACCTCAAGGGCATGCTGTCTACTCACTTGACGTCTATGTTTGAGTACCTGGCACCGCCACGGCGGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR CCA 90 bp | GTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTGCTGGGTGATCTaGCTGCCCTTCCGCCGTGGCGGTGCCAGGTACTCAAACATAGAC | + |
|
Preference number: 1 (lower is better) Translates to: VVAGFLLWLVDCWVI*LPFRRGGARYSNID Trigger: GTCTATGTTTGAGTACCTGGCACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR CCA 90 bp | ACACGTTCAAATTCCGTCTGGTTGGTGGTGGCGGGATTTCTGCTCTaGTTGGTGGACTGCTGGGTGATCTGGCTGCCCTTCCGCCGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: TRSNSVWLVVAGFLL*LVDCWVIWLPFRRG Trigger: GCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR GCA 90 bp | GGGGTGATGGAGCCACAGAGCTGGCTGATGAGGGCGAGCTGGTGCTaGTCTGTGTTACCCTGCATGATAGGGCTACGAGTCCACATCTCT | + |
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Preference number: 1 (lower is better) Translates to: GVMEPQSWLMRASWC*SVLPCMIGLRVHIS Trigger: AGAGATGTGGACTCGTAGCCCTATCATGCAGGGTAACACAGAGCAGCACCAGCTCGCCCTCATCAGCCAGCTCTGTGGCTCCATCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR GCA 90 bp | TCTGGGGTGATGGAGCCACAGAGCTGGCTGATGAGGGCGAGCTGGTaGTGCTCTGTGTTACCCTGCATGATAGGGCTACGAGTCCACATC | + |
|
Preference number: 1 (lower is better) Translates to: SGVMEPQSWLMRASW*CSVLPCMIGLRVHI Trigger: GATGTGGACTCGTAGCCCTATCATGCAGGGTAACACAGAGCAGCACCAGCTCGCCCTCATCAGCCAGCTCTGTGGCTCCATCACCCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR GCA 90 bp | GTTGGTGGACTGCTGGGTGATCTGGCTGCCCTTCCGCCGTGGCGGTaGCAGGTACTCAAACATAGACGTCAAGTGAGTAGACAGCATGCC | + |
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Preference number: 1 (lower is better) Translates to: VGGLLGDLAALPPWR*QVLKHRRQVSRQHA Trigger: GGCATGCTGTCTACTCACTTGACGTCTATGTTTGAGTACCTGGCACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR CCA 90 bp | GCTCTGGTTGGTGGACTGCTGGGTGATCTGGCTGCCCTTCCGCCGTaGCGGTGCCAGGTACTCAAACATAGACGTCAAGTGAGTAGACAG | + |
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Preference number: 1 (lower is better) Translates to: ALVGGLLGDLAALPP*RCQVLKHRRQVSRQ Trigger: CTGTCTACTCACTTGACGTCTATGTTTGAGTACCTGGCACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR GCA 90 bp | CAGAGCTGGCTGATGAGGGCGAGCTGGTGCTGCTCTGTGTTACCCTaGATGATAGGGCTACGAGTCCACATCTCTGCCATGATGCACCCA | + |
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Preference number: 1 (lower is better) Translates to: QSWLMRASWCCSVLP*MIGLRVHISAMMHP Trigger: TGGGTGCATCATGGCAGAGATGTGGACTCGTAGCCCTATCATGCAGGGTAACACAGAGCAGCACCAGCTCGCCCTCATCAGCCAGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR CCA 90 bp | AACACCGGCCAGTTCCGGCCTCAGAAGACACGTTCAAATTCCGTCTaGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: NTGQFRPQKTRSNSV*LVVAGFLLWLVDCW Trigger: CCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTGTCTTCTGAGGCCGGAACTGGCCGGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR GCA 90 bp | GCAGCCCAGCAAGGTCATGCTCACAGAAGTCAAACACCAGATAGATaGTGCCCTTGCAGCGGTTATACGGTGAGGCTTTGGTCCGACAAA | + |
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Preference number: 1 (lower is better) Translates to: AAQQGHAHRSQTPDR*CPCSGYTVRLWSDK Trigger: TTTGTCGGACCAAAGCCTCACCGTATAACCGCTGCAAGGGCAGCATCTATCTGGTGTTTGACTTCTGTGAGCATGACCTTGCTGGGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| 3UTR CCA 90 bp | TTCCCTCAAGGCTGTGATGGGGAACTAGGGAGGAGAAAGAGGAAGTaGTCAAAATTGAGAGCACAACAGACGGAGGAACTGTGGGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: FPQGCDGELGRRKRK*SKLRAQQTEELWVG Trigger: CCCCACCCACAGTTCCTCCGTCTGTTGTGCTCTCAATTTTGACCACTTCCTCTTTCTCCTCCCTAGTTCCCCATCACAGCCTTGAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154131.2 |
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| 3UTR GCA 90 bp | GCCCAGCAAGGTCATGCTCACAGAAGTCAAACACCAGATAGATGCTaGCCTTGCAGCGGTTATACGGTGAGGCTTTGGTCCGACAAATCT | + |
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Preference number: 1 (lower is better) Translates to: AQQGHAHRSQTPDRC*PCSGYTVRLWSDKS Trigger: AGATTTGTCGGACCAAAGCCTCACCGTATAACCGCTGCAAGGGCAGCATCTATCTGGTGTTTGACTTCTGTGAGCATGACCTTGCTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| 3UTR GCA 90 bp | CAAGGTCATGCTCACAGAAGTCAAACACCAGATAGATGCTGCCCTTaGAGCGGTTATACGGTGAGGCTTTGGTCCGACAAATCTCAATTA | + |
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Preference number: 1 (lower is better) Translates to: QGHAHRSQTPDRCCP*SGYTVRLWSDKSQL Trigger: TAATTGAGATTTGTCGGACCAAAGCCTCACCGTATAACCGCTGCAAGGGCAGCATCTATCTGGTGTTTGACTTCTGTGAGCATGACCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGGTCGCGCACGTAGGCCTTCAGACGGTCCTTCACCTTCCGCTTCTGGCCCTGCCACACCTCTGGGGTaGTGGAGCCACAGAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RGRARRPSDGPSPSASGPATPLG*WSHRAG Trigger: GCCAGCTCTGTGGCTCCATCACCCCAGAGGTGTGGC...AGGGCCAGAAGCGGAAGGTGAAGGACCGTCTGAAGGCCTACGTGCGCGACCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGGTGGACTGCTGGGTGATCTGGCTGCCCTTCCGCCGTGGCGGTGCCAGGTATCACTGTCAATCCGCTaGGCGGGGTCCAGCACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VGGLLGDLAALPPWRCQVSLSIR*AGSSTS Trigger: GCTGGTGCTGGACCCCGCGCAGCGGATTGACAGTGA...TACCTGGCACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR CAA 90 bp | CCCTTGAGGTCCGAGGGCATGGGGTCCGACCAGAAGAAGTCGTGGTaGAGGGCATCGTCACTGTCAATCCGCTGCGCGGGGTCCAGCACC | + |
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Preference number: 2 (lower is better) Translates to: PLRSEGMGSDQKKSW*RASSLSIRCAGSST Trigger: GGTGCTGGACCCCGCGCAGCGGATTGACAGTGACGATGCCCTCAACCACGACTTCTTCTGGTCGGACCCCATGCCCTCGGACCTCAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCATAGGGGTCGCGCACGTAGGCCTTCAGACGGTCCTTCACCTTCCGCTTCTGTTTGGCCACACCTCTaGGGTGATGGAGCCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: EHRGRARRPSDGPSPSASVWPHL*GDGATE Trigger: CTCTGTGGCTCCATCACCCCAGAGGTGTGGCCAAAC...AGAAGCGGAAGGTGAAGGACCGTCTGAAGGCCTACGTGCGCGACCCCTATGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGGACCCCATCCCGGGTAATGAGCACATTCGCAGCCTTCATGTCCCTGTGCGGAGGAACTGTGGGTaGGGTGGGGGTGTGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LQDPIPGNEHIRSLHVPVRRNCG*GGGVFG Trigger: CCCAAACACACCCCCACCCCACCCACAGTTCCTCCG...CACAGGGACATGAAGGCTGCGAATGTGCTCATTACCCGGGATGGGGTCCTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154131.2 |
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| 3UTR CAA 90 bp | ACCGGCCAGTTCCGGCCTCAGAAGACACGTTCAAATTCCGTCTGGTaGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: TGQFRPQKTRSNSVW*VVAGFLLWLVDCWV Trigger: CACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTGTCTTCTGAGGCCGGAACTGGCCGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTGAAAGTCACAGTGGGTaGGCCTCTCCCACCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: ELAMARDLCLPPTMQVVLESHSG*ASPTSL Trigger: AAGTGAGGTGGGAGAGGCTCACCCACTGTGACTTTC...AAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| 3UTR-3UTR TCA 90 bp | CACGTTCAAATTCCGTCTGGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGGTAGTCCCGCTCTCCTaGGAAGAAGAGGGTACCGGG | + |
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Preference number: 2 (lower is better) Translates to: HVQIPSGWWWRDFCSGWWVVPLS*EEEGTG Trigger: CCCGGTACCCTCTTCTTCTCAGGAGAGCGGGACTAC...CCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR CCA 90 bp | ACAACACCGGCCAGTTCCGGCCTCAGAAGACACGTTCAAATTCCGTCTGGTTGGATGGAGCCACAGAGCTaGCTGATGAGGGCGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TTPASSGLRRHVQIPSGWMEPQS*LMRASW Trigger: CCAGCTCGCCCTCATCAGCCAGCTCTGTGGCTCCAT...CCAACCAGACGGAATTTGAACGTGTCTTCTGAGGCCGGAACTGGCCGGTGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR CCA 90 bp | CACGTTCAAATTCCGTCTGGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGCTGATGAGGGCGAGCTaGTGCTGCTCTGTGTTACCC | + |
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Preference number: 2 (lower is better) Translates to: HVQIPSGWWWRDFCSGWWLMRAS*CCSVLP Trigger: GGGTAACACAGAGCAGCACCAGCTCGCCCTCATCAG...CCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCAGCTTCAGGACCCCATCCCGGGTAATGAGCACATTCGCAGCCTTCATGCTGAGGGACAGAGGTTaGAAGACAGGCGAGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: SASFRTPSRVMSTFAAFMLRDRG*KTGERI Trigger: GATTCTCTCGCCTGTCTTTCAACCTCTGTCCCTCAG...CATGAAGGCTGCGAATGTGCTCATTACCCGGGATGGGGTCCTGAAGCTGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154131.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACCCCATCCCGGGTAATGAGCACATTCGCAGCCTTCATGTCCCTGTGCAGGCCGTTCAGCAGCATCTaGATCACTCTCTTGATCTCA | + |
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Preference number: 2 (lower is better) Translates to: RTPSRVMSTFAAFMSLCRPFSSI*ITLLIS Trigger: TGAGATCAAGAGAGTGATGCAGATGCTGCTGAACGG...CCTGCACAGGGACATGAAGGCTGCGAATGTGCTCATTACCCGGGATGGGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTTTCCCAGTGCCAGGGTaGGAGTTAATATGTACTGGA | + |
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Preference number: 2 (lower is better) Translates to: ELAMARDLCLPPTMQVVLFPVPG*ELICTG Trigger: TCCAGTACATATTAACTCCCACCCTGGCACTGGGAA...AAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAATTCCGTCTGGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTGCTTCACCTTCCGCTTCTaGCCCTTCACAAGTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SNSVWLVVAGFLLWLVDCFTFRF*PFTSSS Trigger: GCTGGAACTTGTGAAGGGCCAGAAGCGGAAGGTGAA...GCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR TCA 90 bp | AAGACACGTTCAAATTCCGTCTGGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGTCCACATCTCTGCCATaGTGCACCCAGCACCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: KTRSNSVWLVVAGFLLWLSTSLP*CTQHPK Trigger: TTTGGGGTGCTGGGTGCATCATGGCAGAGATGTGGA...CAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR GCA 90 bp | CACGTTCAAATTCCGTCTGGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACACCAGATAGATGCTaGCCTTGCAGCGGTTATACG | + |
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Preference number: 2 (lower is better) Translates to: HVQIPSGWWWRDFCSGWWTPDRC*PCSGYT Trigger: CGTATAACCGCTGCAAGGGCAGCATCTATCTGGTGT...CCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAATTCCGTCTGGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTGCAACATAGACGTCAAGTaGGTAGACAGCATGCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SNSVWLVVAGFLLWLVDCNIDVK*VDSMPL Trigger: CAAGGGCATGCTGTCTACTCACTTGACGTCTATGTT...GCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAATTCCGTCTGGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTGCCAAACACCAGATAGATaGTGCCCTTGCAGCGGTTAT | + |
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Preference number: 2 (lower is better) Translates to: SNSVWLVVAGFLLWLVDCQTPDR*CPCSGY Trigger: ATAACCGCTGCAAGGGCAGCATCTATCTGGTGTTTG...GCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR GCA 90 bp | AACGTGAACTTGACTAAGACGTTGCTCAGCAGCCCAGCAAGGTCATGCTCACAGACACCAGATAGATGCTaGCCTTGCAGCGGTTATACG | + |
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Preference number: 2 (lower is better) Translates to: NVNLTKTLLSSPARSCSQTPDRC*PCSGYT Trigger: CGTATAACCGCTGCAAGGGCAGCATCTATCTGGTGT...CTGTGAGCATGACCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTTCACGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGATAGATGCTGCCCTTGCAGCGGTTATACGGTGAGGCTTTGGTCCGACAAACAAACACCAGATAGATaGTGCCCTTGCAGCGGTTAT | + |
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Preference number: 2 (lower is better) Translates to: PDRCCPCSGYTVRLWSDKQTPDR*CPCSGY Trigger: ATAACCGCTGCAAGGGCAGCATCTATCTGGTGTTTG...TTTGTCGGACCAAAGCCTCACCGTATAACCGCTGCAAGGGCAGCATCTATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| 3UTR CAA 90 bp | TTCAGCAGCATCTGCATCACTCTCTTGATCTCAGACAACGTGAACTaGACTAAGACGTTGCTCAGCAGCCCAGCAAGGTCATGCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: FSSICITLLISDNVN*TKTLLSSPARSCSQ Trigger: CTGTGAGCATGACCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTTCACGTTGTCTGAGATCAAGAGAGTGATGCAGATGCTGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| 3UTR CAA 90 bp | TGCATCACTCTCTTGATCTCAGACAACGTGAACTTGACTAAGACGTaGCTCAGCAGCCCAGCAAGGTCATGCTCACAGAAGTCAAACACC | + |
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Preference number: 2 (lower is better) Translates to: CITLLISDNVNLTKT*LSSPARSCSQKSNT Trigger: GGTGTTTGACTTCTGTGAGCATGACCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTTCACGTTGTCTGAGATCAAGAGAGTGATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACTAAGACGTTGCTCAGCAGCCCAGCAAGGTCATGCTCACAGAAGTCAAACGTTTGGGGTCTATACTaGGGGACAGAGGTTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LTKTLLSSPARSCSQKSNVWGLY*GTEVER Trigger: TCTTTCAACCTCTGTCCCTCAGTATAGACCCCAAAC...GTTTGACTTCTGTGAGCATGACCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154131.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGAGAAATGTCACATGTTCCATaGAAAGGAAGCAATCCACTC | + |
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Preference number: 2 (lower is better) Translates to: LRQLFPVPGWELICTGGEMSHVP*KGSNPL Trigger: GAGTGGATTGCTTCCTTTGCATGGAACATGTGACAT...TTCTCCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGATGTCACATGTTCCATaGAAAGGAAGCAATCCACTC | + |
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Preference number: 2 (lower is better) Translates to: DLCLPPTMQVVLRKSQWVMSHVP*KGSNPL Trigger: GAGTGGATTGCTTCCTTTGCATGGAACATGTGACAT...CACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCAGACAACGTGAACTTGACTAAGACGTTGCTCAGCAGCCCAGCAAGGTCAATGTCACATGTTCCATaGAAAGGAAGCAATCCACTC | + |
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Preference number: 2 (lower is better) Translates to: ISDNVNLTKTLLSSPARSMSHVP*KGSNPL Trigger: GAGTGGATTGCTTCCTTTGCATGGAACATGTGACAT...TGACCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTTCACGTTGTCTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACGTTGCTCAGCAGCCCAGCAAGGTCATGCTCACAGAAGTCAAACACCAGTGATGGTTCCTATCTaGAATCCAATTCTCGTATCA | + |
|
Preference number: 2 (lower is better) Translates to: LRRCSAAQQGHAHRSQTPVMVPI*NPILVS Trigger: TGATACGAGAATTGGATTCCAGATAGGAACCATCAC...TGGTGTTTGACTTCTGTGAGCATGACCTTGCTGGGCTGCTGAGCAACGTCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154131.2 |
||
| 3UTR CCA 72 bp | GTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTGCTaGGTGATCTGGCTGCCCTTCCGCCGTGGCGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VVAGFLLWLVDC*VIWLPFRRGGA Trigger: GGCACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR GCA 72 bp | TTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACTaGTGGGTGATCTGGCTGCCCTTCCGCCGTGGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: LVVAGFLLWLVD*WVIWLPFRRGG Trigger: ACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CCA 72 bp | AGGTCCGAGGGCATGGGGTCCGACCAGAAGAAGTCGTaGTTGAGGGCATCGTCACTGTCAATCCGCTGCGCG | + |
|
Preference number: 3 (lower is better) Translates to: RSEGMGSDQKKS*LRASSLSIRCA Trigger: CGCGCAGCGGATTGACAGTGACGATGCCCTCAACCACGACTTCTTCTGGTCGGACCCCATGCCCTCGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CCA 72 bp | GGATTTCTGCTCTGGTTGGTGGACTGCTGGGTGATCTaGCTGCCCTTCCGCCGTGGCGGTGCCAGGTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GFLLWLVDCWVI*LPFRRGGARYS Trigger: TGAGTACCTGGCACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGCAGAAATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CCA 72 bp | GCCTCTGTCCCTCAAACTCTCATCCAGAGGAAGAGCTaGCGATGGCGAGGGACCTGTGCCTTCCTCCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: ASVPQTLIQRKS*RWRGTCAFLPP Trigger: TGGTGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAGGGACAGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| 3UTR CCA 72 bp | GGTGGACTGCTGGGTGATCTGGCTGCCCTTCCGCCGTaGCGGTGCCAGGTACTCAAACATAGACGTCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GGLLGDLAALPP*RCQVLKHRRQV Trigger: CACTTGACGTCTATGTTTGAGTACCTGGCACCGCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR GCA 72 bp | AAGTCGTGGTTGAGGGCATCGTCACTGTCAATCCGCTaGGCGGGGTCCAGCACCAGCAGCTTGTCAATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSWLRASSLSIR*AGSSTSSLSMR Trigger: CCTCATTGACAAGCTGCTGGTGCTGGACCCCGCGCAGCGGATTGACAGTGACGATGCCCTCAACCACGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CCA 72 bp | GTCCCTCAAACTCTCATCCAGAGGAAGAGCTGGCGATaGCGAGGGACCTGTGCCTTCCTCCCACCATGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VPQTLIQRKSWR*RGTCAFLPPCK Trigger: CTTGCATGGTGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| 3UTR CCA 72 bp | TTTGGCCACACCTCTGGGGTGATGGAGCCACAGAGCTaGCTGATGAGGGCGAGCTGGTGCTGCTCTGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: FGHTSGVMEPQS*LMRASWCCSVL Trigger: TAACACAGAGCAGCACCAGCTCGCCCTCATCAGCCAGCTCTGTGGCTCCATCACCCCAGAGGTGTGGCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CCA 72 bp | AATTCCGTCTGGTTGGTGGTGGCGGGATTTCTGCTCTaGTTGGTGGACTGCTGGGTGATCTGGCTGCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: NSVWLVVAGFLL*LVDCWVIWLPF Trigger: GAAGGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR TCA 72 bp | CGTGGCGGTGCCAGGTACTCAAACATAGACGTCAAGTaGGTAGACAGCATGCCCTTGAGGTCCGAGGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: RGGARYSNIDVK*VDSMPLRSEGM Trigger: CATGCCCTCGGACCTCAAGGGCATGCTGTCTACTCACTTGACGTCTATGTTTGAGTACCTGGCACCGCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR GCA 72 bp | CTGATGAGGGCGAGCTGGTGCTGCTCTGTGTTACCCTaGATGATAGGGCTACGAGTCCACATCTCTGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: LMRASWCCSVLP*MIGLRVHISAM Trigger: CATGGCAGAGATGTGGACTCGTAGCCCTATCATGCAGGGTAACACAGAGCAGCACCAGCTCGCCCTCATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CCA 72 bp | CACAATGTCACCACACGGTTGGTGTATCGGTTGGGCTaGCTATTCTTAGCTAGGCTGAAGGCACGGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HNVTTRLVYRLG*LFLARLKARAS Trigger: GCTGGCCCGTGCCTTCAGCCTAGCTAAGAATAGCCAGCCCAACCGATACACCAACCGTGTGGTGACATTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR GCA 72 bp | GTTACCCTGCATGATAGGGCTACGAGTCCACATCTCTaGCATGATGCACCCAGCACCCCAAAGGTCAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: VTLHDRATSPHL*HDAPSTPKVNG Trigger: CCCATTGACCTTTGGGGTGCTGGGTGCATCATGGCAGAGATGTGGACTCGTAGCCCTATCATGCAGGGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CCA 72 bp | CTCAGAAGACACGTTCAAATTCCGTCTGGTTGGTGGTaGCGGGATTTCTGCTCTGGTTGGTGGACTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRRHVQIPSGWW*RDFCSGWWTAG Trigger: CCCAGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTGTCTTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CCA 72 bp | GGCCTCAGAAGACACGTTCAAATTCCGTCTGGTTGGTaGTGGCGGGATTTCTGCTCTGGTTGGTGGACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GLRRHVQIPSGW*WRDFCSGWWTA Trigger: AGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTGTCTTCTGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CCA 72 bp | TCCGGCCTCAGAAGACACGTTCAAATTCCGTCTGGTTaGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: SGLRRHVQIPSG*WWRDFCSGWWT Trigger: AGTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTGTCTTCTGAGGCCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CCA 72 bp | CAGTTCCGGCCTCAGAAGACACGTTCAAATTCCGTCTaGTTGGTGGTGGCGGGATTTCTGCTCTGGTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QFRPQKTRSNSV*LVVAGFLLWLV Trigger: CACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTGTCTTCTGAGGCCGGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR GCA 72 bp | GGTCATGCTCACAGAAGTCAAACACCAGATAGATGCTaGCCTTGCAGCGGTTATACGGTGAGGCTTTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GHAHRSQTPDRC*PCSGYTVRLWS Trigger: GGACCAAAGCCTCACCGTATAACCGCTGCAAGGGCAGCATCTATCTGGTGTTTGACTTCTGTGAGCATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
||
| 3UTR CCA 72 bp | CCCAGCCCACTCAGGCAGCTGTTCCCAGTGCCAGGGTaGGAGTTAATATGTACTGGAGGAGAAAATCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PSPLRQLFPVPG*ELICTGGENLK Trigger: TTTGAGATTTTCTCCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAGTGGGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| 3UTR GCA 72 bp | CAAGGTCATGCTCACAGAAGTCAAACACCAGATAGATaGTGCCCTTGCAGCGGTTATACGGTGAGGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGHAHRSQTPDR*CPCSGYTVRLW Trigger: CCAAAGCCTCACCGTATAACCGCTGCAAGGGCAGCATCTATCTGGTGTTTGACTTCTGTGAGCATGACCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGCGGTTATACGGTGAGGCTTTGGTCCGACAAATCTCAATTAGGTTCACCAAGGAAGTGGTCAAAATaGAGAGCACAACAGACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CSGYTVRLWSDKSQLGSPRKWSK*RAQQTE Trigger: CTCCGTCTGTTGTGCTCTCAATTTTGACCACTTCCT...TGGTGAACCTAATTGAGATTTGTCGGACCAAAGCCTCACCGTATAACCGCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154131.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCGACAAATCTCAATTAGGTTCACCACATTCTCATGTTTTAGGAGCTGTAGAAAACTTGACTAAGACGTaGCTCAGCAGCCCAGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SDKSQLGSPHSHVLGAVENLTKT*LSSPAR Trigger: CCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTT...TTCTACAGCTCCTAAAACATGAGAATGTGGTGAACCTAATTGAGATTTGTCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCTCTGCCCGCTCGGGAGTCCTCACCGAGCAGCAGCTCCGGAGGCCGGTACTGCCTTGGCCGATCTTaGCAAGTTTCTCGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPARESSPSSSSGGRYCLGRS*QVSRTW Trigger: CCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCA...GTACCGGCCTCCGGAGCTGCTGCTCGGTGAGGACTCCCGAGCGGGCAGAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CAA 72 bp | TCCGAGGGCATGGGGTCCGACCAGAAGAAGTCGTGGTaGAGGGCATCGTCACTGTCAATCCGCTGCGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEGMGSDQKKSW*RASSLSIRCAG Trigger: CCCCGCGCAGCGGATTGACAGTGACGATGCCCTCAACCACGACTTCTTCTGGTCGGACCCCATGCCCTCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCAGCCACACCTCTGGGGTaGTGGAGCCACAGAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLIQRKSWRWRGTCAFLPATPLG*WSHRAG Trigger: GCCAGCTCTGTGGCTCCATCACCCCAGAGGTGTGGC...TGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCATGGTGGACTGCTGGGTaGTCTGGCTGCCCTTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLIQRKSWRWRGTCAFLPWWTAG*SGCPSA Trigger: GGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCA...TGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTTGGTGGACTGCTGGGTaGTCTGGCTGCCCTTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSNSHPEEELAMARDLCLWWTAG*SGCPSA Trigger: GGCGGAAGGGCAGCCAGATCACCCAGCAGTCCACCA...AAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCCCACCTCACTTTGTGTCCACGCTGAGACCTCCAGAGAGGGGCAGGCAGCTCTGGTTGGTGGACTaGTGGGTGATCTGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLPPHFVSTLRPPERGRQLWLVD*WVIWLP Trigger: GGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAG...CTGCCTGCCCCTCTCTGGAGGTCTCAGCGTGGACACAAAGTGAGGTGGGAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCCACCTCACTTTGTGTCCACGCTGAGACCTCCAGAGAGGGGCAGGCAGGTTTGGCCACACCTCTaGGGTGATGGAGCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLPPHFVSTLRPPERGRQVWPHL*GDGATE Trigger: CTCTGTGGCTCCATCACCCCAGAGGTGTGGCCAAAC...CTGCCTGCCCCTCTCTGGAGGTCTCAGCGTGGACACAAAGTGAGGTGGGAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCGCTGCCCTTCCGCCGTaGCGGTGCCAGGTACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKLSSRGRAGDGEGPVPSAALPP*RCQVLK Trigger: TTTGAGTACCTGGCACCGCCACGGCGGAAGGGCAGC...GGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCCACCTCACTTTGTGTCCACGCTGAGACCTCCAGAGAGGGGCAGGCAGGCGGGATTTCTGCTCTaGTTGGTGGACTGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLPPHFVSTLRPPERGRQAGFLL*LVDCWV Trigger: CACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGC...CTGCCTGCCCCTCTCTGGAGGTCTCAGCGTGGACACAAAGTGAGGTGGGAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CCCACTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGGCTGCCCTTCCGCCGTaGCGGTGCCAGGTACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PTQAAVPSARVGVNMYWRAALPP*RCQVLK Trigger: TTTGAGTACCTGGCACCGCCACGGCGGAAGGGCAGC...CCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTGGCCAGCCCAAAATCTaGCAGCTTCAGGACCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PSNSHPEEELAMARDLCLGQPKI*QLQDPI Trigger: GATGGGGTCCTGAAGCTGGCAGATTTTGGGCTGGCC...AAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | CTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCATGAGGGCGAGCTGGTaGTGCTCTGTGTTACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKLSSRGRAGDGEGPVPSMRASW*CSVLPC Trigger: GCAGGGTAACACAGAGCAGCACCAGCTCGCCCTCAT...GGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCACTTCCGCCGTGGCGGTaGCAGGTACTCAAACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLIQRKSWRWRGTCAFLPLPPWR*QVLKHR Trigger: TCTATGTTTGAGTACCTGGCACCGCCACGGCGGAAG...TGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTGTTTGGCCACACCTCTaGGGTGATGGAGCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSNSHPEEELAMARDLCLVWPHL*GDGATE Trigger: CTCTGTGGCTCCATCACCCCAGAGGTGTGGCCAAAC...AAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCCACCTCACTTTGTGTCCACGCTGAGACCTCCAGAGAGGGGCAGGCAGTTCACCTTCCGCTTCTaGCCCTTCACAAGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPPHFVSTLRPPERGRQFTFRF*PFTSSS Trigger: GCTGGAACTTGTGAAGGGCCAGAAGCGGAAGGTGAA...CTGCCTGCCCCTCTCTGGAGGTCTCAGCGTGGACACAAAGTGAGGTGGGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGAGAGACTGCTGGGTGATCTaGCTGCCCTTCCGCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQAAVPSARVGVNMYWRRDCWVI*LPFRRG Trigger: GCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTC...TCTCCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCGTCTGGTTGGTGGTaGCGGGATTTCTGCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSNSHPEEELAMARDLCLPSGWW*RDFCSG Trigger: ACCAGAGCAGAAATCCCGCCACCACCAACCAGACGG...AAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTACGAGTCCACATCTCTaGCATGATGCACCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ELAMARDLCLPPTMQVVLTSPHL*HDAPST Trigger: GGTGCTGGGTGCATCATGGCAGAGATGTGGACTCGT...AAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGAGACACCCCAAAGGTCAATaGGCGGGCCGTAGTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQAAVPSARVGVNMYWRRHPKGQ*AGRSPA Trigger: AGCGGGACTACGGCCCGCCCATTGACCTTTGGGGTG...TCTCCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGAGCGACTGCTGGGTGATCTaGCTGCCCTTCCGCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLPPTMQVVLRKSQWVSDCWVI*LPFRRG Trigger: GCCACGGCGGAAGGGCAGCCAGATCACCCAGCAGTC...GCTCACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CCCACTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGCCGTCTGGTTGGTGGTaGCGGGATTTCTGCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTQAAVPSARVGVNMYWRPSGWW*RDFCSG Trigger: ACCAGAGCAGAAATCCCGCCACCACCAACCAGACGG...CCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCACAAATTCCGTCTGGTTaGTGGTGGCGGGATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLIQRKSWRWRGTCAFLPQIPSG*WWRDFC Trigger: GCAGAAATCCCGCCACCACCAACCAGACGGAATTTG...TGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | CTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCAGACTTCCCCGAATGTaGCTTGGCCGATCTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKLSSRGRAGDGEGPVPSRLPRM*LGRSWQ Trigger: TTGCCAAGATCGGCCAAGGCACATTCGGGGAAGTCT...GGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009699.16 |
||
| CDS-3UTR GCA 90 bp | ACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCATGCTCTGTGTTACCCTaGATGATAGGGCTACGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLIQRKSWRWRGTCAFLPCSVLP*MIGLRV Trigger: GACTCGTAGCCCTATCATGCAGGGTAACACAGAGCA...TGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | AGGACCCCATCCCGGGTAATGAGCACATTCGCAGCCTTCATGTCCCTGTGCAGGATGGGGAACCGAATGTaGCTTGGCCGATCTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTPSRVMSTFAAFMSLCRMGNRM*LGRSWQ Trigger: TTGCCAAGATCGGCCAAGGCACATTCGGTTCCCCAT...CCTGCACAGGGACATGAAGGCTGCGAATGTGCTCATTACCCGGGATGGGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGAGCCACCCCAAAGGTCAATaGGCGGGCCGTAGTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLPPTMQVVLRKSQWVSHPKGQ*AGRSPA Trigger: AGCGGGACTACGGCCCGCCCATTGACCTTTGGGGTG...GCTCACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTTCACCTTCCGCTTCTaGCCCTTCACAAGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKLSSRGRAGDGEGPVPSFTFRF*PFTSSS Trigger: GCTGGAACTTGTGAAGGGCCAGAAGCGGAAGGTGAA...GGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCAGAAGAAGTCGTGGTTaGGGGCATCGTCACTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKLSSRGRAGDGEGPVPSRRSRG*GHRHCQ Trigger: TTGACAGTGACGATGCCCTCAACCACGACTTCTTCT...GGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGAGAAGGCCAGCCCAAAATCTaGCAGCTTCAGGACCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRQLFPVPGWELICTGGEGQPKI*QLQDPI Trigger: GATGGGGTCCTGAAGCTGGCAGATTTTGGGCTGGCC...TTCTCCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CCCACTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGTCCCCGAATGTGCCTTaGCCGATCTTGGCAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTQAAVPSARVGVNMYWRSPNVP*PILASF Trigger: GAAACTTGCCAAGATCGGCCAAGGCACATTCGGGGA...CCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009699.16 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTCGTTCAAATTCCGTCTaGTTGGTGGTGGCGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: ELAMARDLCLPPTMQVVLRSNSV*LVVAGF Trigger: AAATCCCGCCACCACCAACCAGACGGAATTTGAACG...AAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| 3UTR CAA 72 bp | CGGTACCACAATGTCACCACACGGTTGGTGTATCGGTaGGGCTGGCTATTCTTAGCTAGGCTGAAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: RYHNVTTRLVYR*GWLFLARLKAR Trigger: CCGTGCCTTCAGCCTAGCTAAGAATAGCCAGCCCAACCGATACACCAACCGTGTGGTGACATTGTGGTACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| 3UTR CAA 72 bp | TTCCGGCCTCAGAAGACACGTTCAAATTCCGTCTGGTaGGTGGTGGCGGGATTTCTGCTCTGGTTGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FRPQKTRSNSVW*VVAGFLLWLVD Trigger: GTCCACCAACCAGAGCAGAAATCCCGCCACCACCAACCAGACGGAATTTGAACGTGTCTTCTGAGGCCGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGAGATCCACATCTCTGCCATaGTGCACCCAGCACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQAAVPSARVGVNMYWRRSTSLP*CTQHPK Trigger: TTTGGGGTGCTGGGTGCATCATGGCAGAGATGTGGA...TCTCCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGAGATGGTGGCGGGATTTCTaGTCTGGTTGGTGGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQAAVPSARVGVNMYWRRWWRDF*SGWWTA Trigger: AGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCA...TCTCCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | GACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGCTGATGAGGGCGAGCTaGTGCTGCTCTGTGTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: DLCLPPTMQVVLRKSQWVLMRAS*CCSVLP Trigger: GGGTAACACAGAGCAGCACCAGCTCGCCCTCATCAG...CACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGAGCACCTTCTGGCCCGTCTaGCGGTGCTTGGCTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLPPTMQVVLRKSQWVSTFWPV*RCLALK Trigger: CTTTAAAGCCAAGCACCGTCAGACGGGCCAGAAGGT...GCTCACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009699.16 |
||
| CDS-3UTR TCA 90 bp | AACGTGAACTTGACTAAGACGTTGCTCAGCAGCCCAGCAAGGTCATGCTCACAGACCTTCTGGCCCGTCTaGCGGTGCTTGGCTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NVNLTKTLLSSPARSCSQTFWPV*RCLALK Trigger: CTTTAAAGCCAAGCACCGTCAGACGGGCCAGAAGGT...CTGTGAGCATGACCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTTCACGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154131.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGAGCTCCACATCTCTGCCATaGTGCACCCAGCACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLPPTMQVVLRKSQWVSSTSLP*CTQHPK Trigger: TTTGGGGTGCTGGGTGCATCATGGCAGAGATGTGGA...GCTCACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGAGCATTCCGTCTGGTTGGTaGTGGCGGGATTTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLPPTMQVVLRKSQWVSIPSGW*WRDFCS Trigger: AGAGCAGAAATCCCGCCACCACCAACCAGACGGAAT...GCTCACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | GACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGTGCTCTGTGTTACCCTaGATGATAGGGCTACGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLCLPPTMQVVLRKSQWVCSVLP*MIGLRV Trigger: GACTCGTAGCCCTATCATGCAGGGTAACACAGAGCA...CACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGAGCTGCCTTGGCCGATCTTaGCAAGTTTCTCGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLPPTMQVVLRKSQWVSCLGRS*QVSRTW Trigger: CCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCA...GCTCACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009699.16 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGACAACGTGAACTTGACTAAGACGTTGCTCAGCAGCCCAGCAAGGTCATCCCCGAATGTGCCTTaGCCGATCTTGGCAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISDNVNLTKTLLSSPARSSPNVP*PILASF Trigger: GAAACTTGCCAAGATCGGCCAAGGCACATTCGGGGA...TGACCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTTCACGTTGTCTGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154131.2 |
||
| CDS-3UTR TCA 90 bp | GACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGAACATAGACGTCAAGTaGGTAGACAGCATGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLCLPPTMQVVLRKSQWVNIDVK*VDSMPL Trigger: CAAGGGCATGCTGTCTACTCACTTGACGTCTATGTT...CACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | AATCTTGATTTCCCTCAAGGCTGTGATGGGGAACTAGGGAGGAGAAAGAGGAAGAGACTTCCCCGAATGTaGCTTGGCCGATCTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NLDFPQGCDGELGRRKRKRLPRM*LGRSWQ Trigger: TTGCCAAGATCGGCCAAGGCACATTCGGGGAAGTCT...CTTCCTCTTTCTCCTCCCTAGTTCCCCATCACAGCCTTGAGGGAAATCAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154131.2 |
||
| CDS-3UTR GCA 90 bp | GACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGCCGTTCAGCAGCATCTaGATCACTCTCTTGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLCLPPTMQVVLRKSQWVPFSSI*ITLLIS Trigger: TGAGATCAAGAGAGTGATGCAGATGCTGCTGAACGG...CACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | ATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAATCACTGTCAATCCGCTaGGCGGGGTCCAGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MYWRRKSQMSHHVTCSMQSLSIR*AGSSTS Trigger: GCTGGTGCTGGACCCCGCGCAGCGGATTGACAGTGA...TTGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| 3UTR CAA 72 bp | CTCTTGATCTCAGACAACGTGAACTTGACTAAGACGTaGCTCAGCAGCCCAGCAAGGTCATGCTCACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLISDNVNLTKT*LSSPARSCSQK Trigger: CTTCTGTGAGCATGACCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTTCACGTTGTCTGAGATCAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
||
| CDS-3UTR GCA 90 bp | AATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGTCACTGTCAATCCGCTaGGCGGGGTCCAGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NMYWRRKSQMSHHVTCSMSLSIR*AGSSTS Trigger: GCTGGTGCTGGACCCCGCGCAGCGGATTGACAGTGA...CATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | TATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCACTCTGGTTGGTGGACTaGTGGGTGATCTGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YVLEEKISNVPSCHMFHALWLVD*WVIWLP Trigger: GGGCAGCCAGATCACCCAGCAGTCCACCAACCAGAG...TGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | TATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAATGGAGCCACAGAGCTaGCTGATGAGGGCGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YVLEEKISNVPSCHMFHAMEPQS*LMRASW Trigger: CCAGCTCGCCCTCATCAGCCAGCTCTGTGGCTCCAT...TGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| 3UTR CAA 72 bp | ATCTGCATCACTCTCTTGATCTCAGACAACGTGAACTaGACTAAGACGTTGCTCAGCAGCCCAGCAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ICITLLISDNVN*TKTLLSSPARS Trigger: TGACCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTTCACGTTGTCTGAGATCAAGAGAGTGATGCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
||
| CDS-3UTR CCA 90 bp | TGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAAACTGATGAGGGCGAGCTaGTGCTGCTCTGTGTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: CTGGENLKCPIMSHVPCKLMRAS*CCSVLP Trigger: GGGTAACACAGAGCAGCACCAGCTCGCCCTCATCAG...TTTGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR TCA 90 bp | TGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAAACCAGCAGCTTGTCAATaGGGTCCAGAGCATAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CTGGENLKCPIMSHVPCKPAACQ*GPEHRG Trigger: ACCCCTATGCTCTGGACCTCATTGACAAGCTGCTGG...TTTGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | AATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGATGAGGGCGAGCTGGTaGTGCTCTGTGTTACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NMYWRRKSQMSHHVTCSMMRASW*CSVLPC Trigger: GCAGGGTAACACAGAGCAGCACCAGCTCGCCCTCAT...CATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCATCACTCTCTTGATCTCAGACAACGTGAACTTGACTAAGACGTTGCTCTGCCTTGGCCGATCTTaGCAAGTTTCTCGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ICITLLISDNVNLTKTLLCLGRS*QVSRTW Trigger: CCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCA...GAGCAACGTCTTAGTCAAGTTCACGTTGTCTGAGATCAAGAGAGTGATGCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
||
| CDS-3UTR CCA 90 bp | AATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGGCGGGATTTCTGCTCTaGTTGGTGGACTGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NMYWRRKSQMSHHVTCSMAGFLL*LVDCWV Trigger: CACCCAGCAGTCCACCAACCAGAGCAGAAATCCCGC...CATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCATCACTCTCTTGATCTCAGACAACGTGAACTTGACTAAGACGTTGCTCGAACCGAATGTGCCTTaGCCGATCTTGGCAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICITLLISDNVNLTKTLLEPNVP*PILASF Trigger: GAAACTTGCCAAGATCGGCCAAGGCACATTCGGTTC...GAGCAACGTCTTAGTCAAGTTCACGTTGTCTGAGATCAAGAGAGTGATGCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTCCAGCAGCTTGTCAATaGGGTCCAGAGCATAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVNMYWRRKSQMSHHVTCPAACQ*GPEHRG Trigger: ACCCCTATGCTCTGGACCTCATTGACAAGCTGCTGG...ACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | AATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCTTCCGCCGTGGCGGTaGCAGGTACTCAAACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: NMYWRRKSQMSHHVTCSMLPPWR*QVLKHR Trigger: TCTATGTTTGAGTACCTGGCACCGCCACGGCGGAAG...CATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTATGTCACCACACGGTTaGTGTATCGGTTGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVNMYWRRKSQMSHHVTCMSPHG*CIGWAG Trigger: GCCAGCCCAACCGATACACCAACCGTGTGGTGACAT...ACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | TATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAACACCAGATAGATGCTaGCCTTGCAGCGGTTATACG | + |
|
Preference number: 4 (lower is better) Translates to: YVLEEKISNVPSCHMFHATPDRC*PCSGYT Trigger: CGTATAACCGCTGCAAGGGCAGCATCTATCTGGTGT...TGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | TTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCAACGAGTCCACATCTCTaGCATGATGCACCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LICTGGENLKCPIMSHVPTSPHL*HDAPST Trigger: GGTGCTGGGTGCATCATGGCAGAGATGTGGACTCGT...TGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | TTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGGTGGCGGGATTTCTaGTCTGGTTGGTGGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LICTGGENLKCPIMSHVPWWRDF*SGWWTA Trigger: AGCAGTCCACCAACCAGAGCAGAAATCCCGCCACCA...TGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR CCA 90 bp | TTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCAATGTCACCACACGGTTaGTGTATCGGTTGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LICTGGENLKCPIMSHVPMSPHG*CIGWAG Trigger: GCCAGCCCAACCGATACACCAACCGTGTGGTGACAT...TGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTACACCAGATAGATGCTaGCCTTGCAGCGGTTATACG | + |
|
Preference number: 4 (lower is better) Translates to: GVNMYWRRKSQMSHHVTCTPDRC*PCSGYT Trigger: CGTATAACCGCTGCAAGGGCAGCATCTATCTGGTGT...ACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
||
| CDS-3UTR GCA 90 bp | ATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAACAAACACCAGATAGATaGTGCCCTTGCAGCGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: MYWRRKSQMSHHVTCSMQQTPDR*CPCSGY Trigger: ATAACCGCTGCAAGGGCAGCATCTATCTGGTGTTTG...TTGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR GCA 90 bp | AATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCCGTTCAGCAGCATCTaGATCACTCTCTTGATCTCA | + |
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Preference number: 4 (lower is better) Translates to: NMYWRRKSQMSHHVTCSMPFSSI*ITLLIS Trigger: TGAGATCAAGAGAGTGATGCAGATGCTGCTGAACGG...CATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR TCA 90 bp | TTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCAAACATAGACGTCAAGTaGGTAGACAGCATGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LICTGGENLKCPIMSHVPNIDVK*VDSMPL Trigger: CAAGGGCATGCTGTCTACTCACTTGACGTCTATGTT...TGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | CCTCTCCCACCTCACTTTGTGTCCACGCTGAGACCTCCAGAGAGGGGCAGGCAGTCCAGCACCAGCAGCTaGTCAATGAGGTCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLPPHFVSTLRPPERGRQSSTSS*SMRSRA Trigger: TGCTCTGGACCTCATTGACAAGCTGCTGGTGCTGGA...CTGCCTGCCCCTCTCTGGAGGTCTCAGCGTGGACACAAAGTGAGGTGGGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | CCTCTCCCACCTCACTTTGTGTCCACGCTGAGACCTCCAGAGAGGGGCAGGCAGCGGTTGGTGTATCGGTaGGGCTGGCTATTCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLPPHFVSTLRPPERGRQRLVYR*GWLFLA Trigger: AGCTAAGAATAGCCAGCCCAACCGATACACCAACCG...CTGCCTGCCCCTCTCTGGAGGTCTCAGCGTGGACACAAAGTGAGGTGGGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | CCTCTCCCACCTCACTTTGTGTCCACGCTGAGACCTCCAGAGAGGGGCAGGCAGTCAAATTCCGTCTGGTaGGTGGTGGCGGGATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLPPHFVSTLRPPERGRQSNSVW*VVAGFL Trigger: CAGAAATCCCGCCACCACCAACCAGACGGAATTTGA...CTGCCTGCCCCTCTCTGGAGGTCTCAGCGTGGACACAAAGTGAGGTGGGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | ACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCACAGAAGAAGTCGTGGTaGAGGGCATCGTCACTGTCA | + |
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Preference number: 5 (lower is better) Translates to: TLIQRKSWRWRGTCAFLPQKKSW*RASSLS Trigger: TGACAGTGACGATGCCCTCAACCACGACTTCTTCTG...TGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS TCA 90 bp | CCCCGAATGTGCCTTGGCCGATCTTGGCAAGTTTCTCGTACTTGGTaGCCTCATCGCAGAACGGGCATTCCACCGAGTCGTACTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRMCLGRSWQVSRTW*PHRRTGIPPSRTAW Trigger: CCAAGCAGTACGACTCGGTGGAATGCCCGTTCTGCGATGAGGTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATTCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000154131.2 |
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| CDS-3UTR CAA 90 bp | CTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCGTGCCTTGGCCGATCTaGGCAAGTTTCTCGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKLSSRGRAGDGEGPVPSVPWPI*ASFSYL Trigger: CAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCAC...GGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009699.16 |
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| CDS-3UTR CAA 90 bp | TTCAGGACCCCATCCCGGGTAATGAGCACATTCGCAGCCTTCATGTCCCTGTGCTTCCCCGAATGTGCCTaGGCCGATCTTGGCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FRTPSRVMSTFAAFMSLCFPECA*ADLGKF Trigger: AAACTTGCCAAGATCGGCCAAGGCACATTCGGGGAA...GCACAGGGACATGAAGGCTGCGAATGTGCTCATTACCCGGGATGGGGTCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154131.2 |
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| CDS TCA 90 bp | AACCGAATGTGCCTTGGCCGATCTTGGCAAGTTTCTCGTACTTGGTaGCCTCATCGCAGAACGGGCATTCCACCGAGTCGTACTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NRMCLGRSWQVSRTW*PHRRTGIPPSRTAW Trigger: CCAAGCAGTACGACTCGGTGGAATGCCCGTTCTGCGATGAGGTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATTCGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| CDS-3UTR CAA 90 bp | ACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCTCCCAATCTGCATCACTCTCTaGATCTCAGACAACGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TLIQRKSWRWRGTCAFLPICITL*ISDNVN Trigger: GTTCACGTTGTCTGAGATCAAGAGAGTGATGCAGAT...TGGGAGGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS TCA 90 bp | TCATTCTCCATCAACACTTTCTTCAGAGCCACCTTCTGGCCCGTCTaGCGGTGCTTGGCTTTAAAGACTTCCCCGAATGTGCCTTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SFSINTFFRATFWPV*RCLALKTSPNVPWP Trigger: CGGCCAAGGCACATTCGGGGAAGTCTTTAAAGCCAAGCACCGTCAGACGGGCCAGAAGGTGGCTCTGAAGAAAGTGTTGATGGAGAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000154131.2 |
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| CDS-3UTR CAA 90 bp | CTCAAACTCTCATCCAGAGGAAGAGCTGGCGATGGCGAGGGACCTGTGCCTTCCATCTGCATCACTCTCTaGATCTCAGACAACGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LKLSSRGRAGDGEGPVPSICITL*ISDNVN Trigger: GTTCACGTTGTCTGAGATCAAGAGAGTGATGCAGAT...GGAAGGCACAGGTCCCTCGCCATCGCCAGCTCTTCCTCTGGATGAGAGTTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | GACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGTCCAGCACCAGCAGCTaGTCAATGAGGTCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DLCLPPTMQVVLRKSQWVSSTSS*SMRSRA Trigger: TGCTCTGGACCTCATTGACAAGCTGCTGGTGCTGGA...CACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | ACTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGAGATCAAATTCCGTCTGGTaGGTGGTGGCGGGATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQAAVPSARVGVNMYWRRSNSVW*VVAGFL Trigger: CAGAAATCCCGCCACCACCAACCAGACGGAATTTGA...TCTCCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | TGCTCAGCAGCCCAGCAAGGTCATGCTCACAGAAGTCAAACACCAGATAGATGCGTGCCTTGGCCGATCTaGGCAAGTTTCTCGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSAAQQGHAHRSQTPDRCVPWPI*ASFSYL Trigger: CAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCAC...GCATCTATCTGGTGTTTGACTTCTGTGAGCATGACCTTGCTGGGCTGCTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| CDS-3UTR CAA 90 bp | GACCTGTGCCTTCCTCCCACCATGCAAGTAGTTCTTAGAAAGTCACAGTGGGTGAACTTGACTAAGACGTaGCTCAGCAGCCCAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLCLPPTMQVVLRKSQWVNLTKT*LSSPAR Trigger: CCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTT...CACCCACTGTGACTTTCTAAGAACTACTTGCATGGTGGGAGGAAGGCACAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | CGGTACCACAATGTCACCACACGGTTGGTGTATCGGTTGGGCTGGCTATTCTTAGGAACCGAATGTGCCTaGGCCGATCTTGGCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RYHNVTTRLVYRLGWLFLGTECA*ADLGKF Trigger: AAACTTGCCAAGATCGGCCAAGGCACATTCGGTTCC...TAAGAATAGCCAGCCCAACCGATACACCAACCGTGTGGTGACATTGTGGTACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| CDS-3UTR CAA 90 bp | CTCAGGCAGCTGTTCCCAGTGCCAGGGTGGGAGTTAATATGTACTGGAGGAGAAAGGAGCTGTAGAATCTaGATTTCCCTCAAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRQLFPVPGWELICTGGERSCRI*ISLKAV Trigger: CACAGCCTTGAGGGAAATCAAGATTCTACAGCTCCT...TTCTCCTCCAGTACATATTAACTCCCACCCTGGCACTGGGAACAGCTGCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | ATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAAGTAGACAGCATGCCCTaGAGGTCCGAGGGCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MYWRRKSQMSHHVTCSMQVDSMP*RSEGMG Trigger: CCCCATGCCCTCGGACCTCAAGGGCATGCTGTCTAC...TTGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | TTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCAGTAGACAGCATGCCCTaGAGGTCCGAGGGCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LICTGGENLKCPIMSHVPVDSMP*RSEGMG Trigger: CCCCATGCCCTCGGACCTCAAGGGCATGCTGTCTAC...TGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | ATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAAAATGTCACCACACGGTaGGTGTATCGGTTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MYWRRKSQMSHHVTCSMQNVTTR*VYRLGW Trigger: CCAGCCCAACCGATACACCAACCGTGTGGTGACATT...TTGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | ATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAATTCCCCGAATGTGCCTaGGCCGATCTTGGCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MYWRRKSQMSHHVTCSMQFPECA*ADLGKF Trigger: AAACTTGCCAAGATCGGCCAAGGCACATTCGGGGAA...TTGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009699.16 |
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| CDS-3UTR CAA 90 bp | TGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAAAAACTTGACTAAGACGTaGCTCAGCAGCCCAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CTGGENLKCPIMSHVPCKNLTKT*LSSPAR Trigger: CCTTGCTGGGCTGCTGAGCAACGTCTTAGTCAAGTT...TTTGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | ATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAACGGTTGGTGTATCGGTaGGGCTGGCTATTCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: MYWRRKSQMSHHVTCSMQRLVYR*GWLFLA Trigger: AGCTAAGAATAGCCAGCCCAACCGATACACCAACCG...TTGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | GGAGTTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTAATGTCACCACACGGTaGGTGTATCGGTTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GVNMYWRRKSQMSHHVTCNVTTR*VYRLGW Trigger: CCAGCCCAACCGATACACCAACCGTGTGGTGACATT...ACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | TGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCAAACAGAAGAAGTCGTGGTaGAGGGCATCGTCACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CTGGENLKCPIMSHVPCKQKKSW*RASSLS Trigger: TGACAGTGACGATGCCCTCAACCACGACTTCTTCTG...TTTGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | TCCGACAAATCTCAATTAGGTTCACCACATTCTCATGTTTTAGGAGCTGTAGAAGTGCCTTGGCCGATCTaGGCAAGTTTCTCGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDKSQLGSPHSHVLGAVEVPWPI*ASFSYL Trigger: CAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCAC...TTCTACAGCTCCTAAAACATGAGAATGTGGTGAACCTAATTGAGATTTGTCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| CDS-3UTR CAA 90 bp | TATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATGCATCAAACAGCTCATACTaGTCTACGTTTGGCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: YVLEEKISNVPSCHMFHASNSSY*STFGHT Trigger: GGTGTGGCCAAACGTAGACAAGTATGAGCTGTTTGA...TGCATGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | TTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCAAGGAGCTGTAGAATCTaGATTTCCCTCAAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LICTGGENLKCPIMSHVPRSCRI*ISLKAV Trigger: CACAGCCTTGAGGGAAATCAAGATTCTACAGCTCCT...TGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS-3UTR CAA 90 bp | TTAATATGTACTGGAGGAGAAAATCTCAAATGTCCCATCATGTCACATGTTCCATCAAACAGCTCATACTaGTCTACGTTTGGCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: LICTGGENLKCPIMSHVPSNSSY*STFGHT Trigger: GGTGTGGCCAAACGTAGACAAGTATGAGCTGTTTGA...TGGAACATGTGACATGATGGGACATTTGAGATTTTCTCCTCCAGTACATATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000120105.8 |
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| CDS CAA 90 bp | GGGGAACCGAATGTGCCTTGGCCGATCTTGGCAAGTTTCTCGTACTaGGTGACCTCATCGCAGAACGGGCATTCCACCGAGTCGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GEPNVPWPILASFSY*VTSSQNGHSTESYC Trigger: GCAGTACGACTCGGTGGAATGCCCGTTCTGCGATGAGGTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATTCGGTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| CDS CAA 90 bp | ACTTCCCCGAATGTGCCTTGGCCGATCTTGGCAAGTTTCTCGTACTaGGTGACCTCATCGCAGAACGGGCATTCCACCGAGTCGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSPNVPWPILASFSY*VTSSQNGHSTESYC Trigger: GCAGTACGACTCGGTGGAATGCCCGTTCTGCGATGAGGTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATTCGGGGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000154131.2 |
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| CDS CAA 72 bp | GGCTGTGATGGGGAACCGAATGTGCCTTGGCCGATCTaGGCAAGTTTCTCGTACTTGGTGACCTCATCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GCDGEPNVPWPI*ASFSYLVTSSQ Trigger: CTGCGATGAGGTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATTCGGTTCCCCATCACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123170.8 |
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| CDS CAA 90 bp | GCCCGTCTGACGGTGCTTGGCTTTAAAGACTTCCCCGAATGTGCCTaGGCCGATCTTGGCAAGTTTCTCGTACTTGGTGACCTCATCGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARLTVLGFKDFPECA*ADLGKFLVLGDLIA Trigger: TGCGATGAGGTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATTCGGGGAAGTCTTTAAAGCCAAGCACCGTCAGACGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000154131.2 |
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| CDS CAA 72 bp | AATGTGCCTTGGCCGATCTTGGCAAGTTTCTCGTACTaGGTGACCTCATCGCAGAACGGGCATTCCACCGAG | + |
|
Preference number: 6 (lower is better) Translates to: NVPWPILASFSY*VTSSQNGHSTE Trigger: CTCGGTGGAATGCCCGTTCTGCGATGAGGTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009699.16 ENSMUST00000123170.8 ENSMUST00000154131.2 |
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| CDS CAA 90 bp | CGGTGCTTGGCTTTAAAGACTTCCCCGAATGTGCCTTGGCCGATCTaGGCAAGTTTCTCGTACTTGGTGACCTCATCGCAGAACGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RCLALKTSPNVPWPI*ASFSYLVTSSQNGH Trigger: ATGCCCGTTCTGCGATGAGGTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATTCGGGGAAGTCTTTAAAGCCAAGCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000154131.2 |
||
| CDS CCA 72 bp | CGGTGCTTGGCTTTAAAGACTTCCCCGAATGTGCCTTaGCCGATCTTGGCAAGTTTCTCGTACTTGGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: RCLALKTSPNVP*PILASFSYLVT Trigger: GGTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATTCGGGGAAGTCTTTAAAGCCAAGCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000154131.2 |
||
| CDS TCA 72 bp | ATCAACACTTTCTTCAGAGCCACCTTCTGGCCCGTCTaGCGGTGCTTGGCTTTAAAGACTTCCCCGAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: INTFFRATFWPV*RCLALKTSPNV Trigger: CACATTCGGGGAAGTCTTTAAAGCCAAGCACCGTCAGACGGGCCAGAAGGTGGCTCTGAAGAAAGTGTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000154131.2 |
||
| CDS CAA 72 bp | GCTTTAAAGACTTCCCCGAATGTGCCTTGGCCGATCTaGGCAAGTTTCTCGTACTTGGTGACCTCATCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ALKTSPNVPWPI*ASFSYLVTSSQ Trigger: CTGCGATGAGGTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATTCGGGGAAGTCTTTAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000154131.2 |
||
| CDS CAA 72 bp | ACGGTGCTTGGCTTTAAAGACTTCCCCGAATGTGCCTaGGCCGATCTTGGCAAGTTTCTCGTACTTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TVLGFKDFPECA*ADLGKFLVLGD Trigger: GTCACCAAGTACGAGAAACTTGCCAAGATCGGCCAAGGCACATTCGGGGAAGTCTTTAAAGCCAAGCACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009699.16 ENSMUST00000154131.2 |
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