Pregenerated sensors for CDK8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029635Ensembl transcript IDs: ENSMUST00000031640.15, ENSMUST00000161181.8, ENSMUST00000162494.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTAGGCAGCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTaGCTCGCAGAGGTCACCGTGCCTCGAGGAGGTCACCGTGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: TRQLQIRTEECGLTP*LAEVTVPRGGHRAS Trigger: TGAGGCACGGTGACCTCCTCGAGGCACGGTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGCTGCCTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR TCA 90 bp | AGCACTACACTAGGCAGCTTCAAATCAGGACAGAAGAGTGCGGACTaGCGCCGTGCCTCGCAGAGGTCACCGTGCCTCGAGGAGGTCACC | + |
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Preference number: 1 (lower is better) Translates to: STTLGSFKSGQKSAD*RRASQRSPCLEEVT Trigger: GGTGACCTCCTCGAGGCACGGTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGCTGCCTAGTGTAGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR GCA 90 bp | CCGTGCCTCGAGGAGGTCACCGTGCCTCACGGAGGTCGCCACTCATaGTTTTGTATTCAGAAAGCATGCTCACAAATCAGCAACACCAAC | + |
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Preference number: 1 (lower is better) Translates to: PCLEEVTVPHGGRHS*FCIQKACSQISNTN Trigger: GTTGGTGTTGCTGATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGGCACGGTGACCTCCTCGAGGCACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR CCA 90 bp | AAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTaGTGGAACTCGGCTACTGGACATTGTGAAGATGTGGTTGTACAG | + |
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Preference number: 1 (lower is better) Translates to: KLRYNLEATTPICDN*WNSATGHCEDVVVQ Trigger: CTGTACAACCACATCTTCACAATGTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACCAGTACCGATGTGTCTaGTGTGAGTACTGTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHQYRCV*CEYCGG Trigger: GCCTCCACAGTACTCACATCAGACACATCGGTACTG...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACTCCTGGTTCCCCGGATaGCCAGTTCCGTTAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDSWFPG*PVPLVW Trigger: CCACACTAACGGAACTGGCCATCCGGGGAACCAGGA...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACCTGCATGGCCTGCTCTaGGGTAATTCGCTTTATTGG | + |
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Preference number: 2 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHLHGLL*GNSLYW Trigger: CCAATAAAGCGAATTACCTCAGAGCAGGCCATGCAG...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACCCGATGTGTCTGATGTaGGTACTGTGGAGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDPMCLM*VLWRLL Trigger: CAGCAGCCTCCACAGTACTCACATCAGACACATCGG...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACCCAATCTGTGACAACTaGTGGAACTCGGCTACTGGA | + |
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Preference number: 2 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHPICDN*WNSATG Trigger: TCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGG...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACCAGCATGAGCAACAGTaGACTGACAGACTCCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDQHEQQ*TDRLQH Trigger: GTGCTGGAGTCTGTCAGTGCACTGTTGCTCATGCTG...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACTTGCCCTGCTGCTGCTaGTGGGTCTTTTTGTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDLPCCC*WVFLSP Trigger: AGGAGACAAAAAGACCCAGCAGCAGCAGCAGGGCAA...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACATCTGTGACAACTGGTaGAACTCGGCTACTGGACAT | + |
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Preference number: 2 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHICDNW*NSATGH Trigger: ATGTCCAGTAGCCGAGTTCCACCAGTTGTCACAGAT...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACGCTACAGACTGTCACTaGAAACTATGCTTGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHATDCH*KLCLVS Trigger: ACTGACCAAGCATAGTTTTCAGTGACAGTCTGTAGC...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACATCTGTGACAACTGGTaGAACTCGGCTACTGGACAT | + |
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Preference number: 2 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDICDNW*NSATGH Trigger: ATGTCCAGTAGCCGAGTTCCACCAGTTGTCACAGAT...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACGGCTACTGGACATTGTaGAGATGTGGTTGTACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDGYWTL*RCGCTV Trigger: TACTGTACAACCACATCTTCACAATGTCCAGTAGCC...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCTACCACCCCAATCTGTaGCAACTGGTGGAACTCGGC | + |
|
Preference number: 2 (lower is better) Translates to: PHGGRHSCFCIQKACSQIYHPNL*QLVELG Trigger: GCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTA...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACTATGCTTGGTCAGTCTaGACCATGTCAAGTAAACTA | + |
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Preference number: 2 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHYAWSV*TMSSKL Trigger: TAGTTTACTTGACATGGTTCAGACTGACCAAGCATA...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCACCGGCGAAAACATCTaGCGTGGGAAGTGGGTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PHGGRHSCFCIQKACSQITGENI*RGKWVF Trigger: GAAGACCCACTTCCCACGTCAGATGTTTTCGCCGGT...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACTGTATTCAGAAAGCATaGTCACAAATCAGCAACACC | + |
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Preference number: 2 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHCIQKA*SQISNT Trigger: GGTGTTGCTGATTTGTGAGCATGCTTTCTGAATACA...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACGACATTGTGAAGATGTaGTTGTACAGTACATTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHDIVKM*LYSTFA Trigger: TGCGAATGTACTGTACAACCACATCTTCACAATGTC...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCGGGTCCTGCATGGCCTaGTCTGAGGTAATTCGCTTT | + |
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Preference number: 2 (lower is better) Translates to: PHGGRHSCFCIQKACSQIGSCMA*SEVIRF Trigger: AAAGCGAATTACCTCAGAGCAGGCCATGCAGGACCC...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCTGGTTGTTGCCCTGCTaGTGCTGCTGGGTCTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: PHGGRHSCFCIQKACSQIWLLPC*CCWVFL Trigger: CAAAAAGACCCAGCAGCAGCAGCAGGGCAACAACCA...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR GCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTCAGCATGAGCAACAGTaGACTGACAGACTCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTQHEQQ*TDRLQH Trigger: GTGCTGGAGTCTGTCAGTGCACTGTTGCTCATGCTG...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACGGTAATTCGCTTTATTaGGTCCATAGTGAGCAACTT | + |
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Preference number: 2 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDGNSLY*VHSEQL Trigger: AAGTTGCTCACTATGGACCCAATAAAGCGAATTACC...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCGGCTACTGGACATTGTaGAGATGTGGTTGTACAGTA | + |
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Preference number: 2 (lower is better) Translates to: PHGGRHSCFCIQKACSQIGYWTL*RCGCTV Trigger: TACTGTACAACCACATCTTCACAATGTCCAGTAGCC...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCGCTACAGACTGTCACTaGAAACTATGCTTGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PHGGRHSCFCIQKACSQIATDCH*KLCLVS Trigger: ACTGACCAAGCATAGTTTTCAGTGACAGTCTGTAGC...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTGGGATATGGGATCTGACAACCGGCGAAAACATCTGACGTGGGAAGTGGGTAGCCCAAATATCAATTaGTTTGGTATAATGTCGCGC | + |
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Preference number: 2 (lower is better) Translates to: VWDMGSDNRRKHLTWEVGSPNIN*FGIMSR Trigger: GCGCGACATTATACCAAAGCAATTGATATTTGGGCT...ACCCACTTCCCACGTCAGATGTTTTCGCCGGTTGTCAGATCCCATATCCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR TCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTGGCTACTGGACATTGTaGAGATGTGGTTGTACAGTA | + |
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Preference number: 2 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTGYWTL*RCGCTV Trigger: TACTGTACAACCACATCTTCACAATGTCCAGTAGCC...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCCTGAAGCAAGTGGAATaGTTTACTATCGGGTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: PHGGRHSCFCIQKACSQILKQVE*FTIGFN Trigger: GTTAAACCCGATAGTAAAGCATTCCACTTGCTTCAG...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCTTCCCAATCTTTATCTaGAGGGAATCCCATTACATT | + |
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Preference number: 2 (lower is better) Translates to: PHGGRHSCFCIQKACSQIFPIFI*RESHYI Trigger: AATGTAATGGGATTCCCTGCAGATAAAGATTGGGAA...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR CCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTGACATTGTGAAGATGTaGTTGTACAGTACATTCGCA | + |
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Preference number: 2 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTDIVKM*LYSTFA Trigger: TGCGAATGTACTGTACAACCACATCTTCACAATGTC...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCAAATATCAATTGCTTTaGTATAATGTCGCGCTCCGA | + |
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Preference number: 2 (lower is better) Translates to: PHGGRHSCFCIQKACSQIKYQLL*YNVALR Trigger: TCGGAGCGCGACATTATACCAAAGCAATTGATATTT...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR CAA 90 bp | CACCAACGAGGAAAAGAAAACCCTGTCTGCAACACTCATTTCAGTTaGCTGAACCAACAGGCTTCTATCAATGACAACATATTTAATTAC | + |
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Preference number: 2 (lower is better) Translates to: HQRGKENPVCNTHFS*LNQQASINDNIFNY Trigger: GTAATTAAATATGTTGTCATTGATAGAAGCCTGTTGGTTCAGCAAACTGAAATGAGTGTTGCAGACAGGGTTTTCTTTTCCTCGTTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR CCA 72 bp | GGCCCCTGTGCGTGGCCGCTGTCCTGGTTCCCCGGATaGCCAGTTCCGTTAGTGTGGTTGTTGCCCTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GPCAWPLSWFPG*PVPLVWLLPCC Trigger: GCAGCAGGGCAACAACCACACTAACGGAACTGGCCATCCGGGGAACCAGGACAGCGGCCACGCACAGGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR TCA 72 bp | CTAGGCAGCTTCAAATCAGGACAGAAGAGTGCGGACTaGCGCCGTGCCTCGCAGAGGTCACCGTGCCTCGAG | + |
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Preference number: 3 (lower is better) Translates to: LGSFKSGQKSAD*RRASQRSPCLE Trigger: CTCGAGGCACGGTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGCTGCCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR GCA 72 bp | CTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTaGCTCGCAGAGGTCACCGTGCCTCGAGGAGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LQIRTEECGLTP*LAEVTVPRGGH Trigger: GTGACCTCCTCGAGGCACGGTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR GCA 72 bp | CACTACACTAGGCAGCTTCAAATCAGGACAGAAGAGTaGGGACTGACGCCGTGCCTCGCAGAGGTCACCGTG | + |
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Preference number: 3 (lower is better) Translates to: HYTRQLQIRTEE*GLTPCLAEVTV Trigger: CACGGTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGCTGCCTAGTGTAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR GCA 72 bp | CCAGTTCCGTTAGTGTGGTTGTTGCCCTGCTGCTGCTaGTGGGTCTTTTTGTCTCCTTTCTCATCAGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: PVPLVWLLPCCC*WVFLSPFSSGS Trigger: AGAGCCTGATGAGAAAGGAGACAAAAAGACCCAGCAGCAGCAGCAGGGCAACAACCACACTAACGGAACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACTCGCCACTCATGCTTTaGTATTCAGAAAGCATGCTC | + |
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Preference number: 3 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDSPLML*YSESML Trigger: GAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGA...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACAACACTCATTTCAGTTaGCTGAACCAACAGGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDNTHFS*LNQQAS Trigger: AGAAGCCTGTTGGTTCAGCAAACTGAAATGAGTGTT...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR CCA 72 bp | AACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTaGAACTCGGCTACTGGACATTGTGAAGATGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: NLEATTPICDNW*NSATGHCEDVV Trigger: AACCACATCTTCACAATGTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR CCA 72 bp | TACAACCTGGAAGCTACCACCCCAATCTGTGACAACTaGTGGAACTCGGCTACTGGACATTGTGAAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: YNLEATTPICDN*WNSATGHCEDV Trigger: CACATCTTCACAATGTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACGTCGACAGTGAAATATaGGTTCTGACGTTAGTAGTT | + |
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Preference number: 3 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDVDSEI*VLTLVV Trigger: AACTACTAACGTCAGAACCAATATTTCACTGTCGAC...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| CDS-3UTR CCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCATCCTGGTTCCCCGGATaGCCAGTTCCGTTAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSASWFPG*PVPLVW Trigger: CCACACTAACGGAACTGGCCATCCGGGGAACCAGGA...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR TCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCACCGATGTGTCTGATGTaGGTACTGTGGAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSAPMCLM*VLWRLL Trigger: CAGCAGCCTCCACAGTACTCACATCAGACACATCGG...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR CCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCACCAGTTCCGTTAGTGTaGTTGTTGCCCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSAPVPLV*LLPCCC Trigger: GCAGCAGCAGGGCAACAACCACACTAACGGAACTGG...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACACCGGCGAAAACATCTaGCGTGGGAAGTGGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHTGENI*RGKWVF Trigger: GAAGACCCACTTCCCACGTCAGATGTTTTCGCCGGT...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR TCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACCCGATGTGTCTGATGTaGGTACTGTGGAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHPMCLM*VLWRLL Trigger: CAGCAGCCTCCACAGTACTCACATCAGACACATCGG...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR CCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCAAAGGGAGATGACGTTTaGGTGCTTAAGCTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSAKGDDV*VLKLSE Trigger: CTCCGAGAGCTTAAGCACCCAAACGTCATCTCCCTT...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| CDS-3UTR CCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCAAAGCAGCATGTGGATTaGAACGCTGATAGTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSAKQHVD*NADSRR Trigger: CCTCCGACTATCAGCGTTCCAATCCACATGCTGCTT...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACGATCTGGTACAACAGTaGCTTCACCATTCCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHDLVQQ*LHHSPR Trigger: CCTCGGGGAATGGTGAAGTCACTGTTGTACCAGATC...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
||
| CDS-3UTR GCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCATGCCTCGACCAACTTTaGAGCCCTCGTATTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSACLDQL*SPRIQT Trigger: TGTTTGAATACGAGGGCTGCAAAGTTGGTCGAGGCA...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000162494.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACGGGTCCTGCATGGCCTaGTCTGAGGTAATTCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHGSCMA*SEVIRF Trigger: AAAGCGAATTACCTCAGAGCAGGCCATGCAGGACCC...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR TCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCAACTTTCCGATCAGCATaGGACAGAAACACCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSATFRSA*DRNTFR Trigger: TCTGAAGGTGTTTCTGTCTCATGCTGATCGGAAAGT...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACACCGGCGAAAACATCTaGCGTGGGAAGTGGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDTGENI*RGKWVF Trigger: GAAGACCCACTTCCCACGTCAGATGTTTTCGCCGGT...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR GCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCAGAGATGACGTTTGGGTaGTTAAGCTCTCGGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSAEMTFG*LSSRSN Trigger: ATTACTCCGAGAGCTTAAGCACCCAAACGTCATCTC...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACAAGGGAGATGACGTTTaGGTGCTTAAGCTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHKGDDV*VLKLSE Trigger: CTCCGAGAGCTTAAGCACCCAAACGTCATCTCCCTT...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
||
| CDS-3UTR CCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCAGAACTGGCTTCTTGTTaGCTTTCGAAGCTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSAELASC*LSKLCE Trigger: TTCACAGAGCTTCGAAAGCCAACAAGAAGCCAGTTC...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACGATCTGGTACAACAGTaGCTTCACCATTCCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDDLVQQ*LHHSPR Trigger: CCTCGGGGAATGGTGAAGTCACTGTTGTACCAGATC...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACGGGTCCTGCATGGCCTaGTCTGAGGTAATTCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDGSCMA*SEVIRF Trigger: AAAGCGAATTACCTCAGAGCAGGCCATGCAGGACCC...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR CCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACCCCTGCTGCTGCTGCTaGGTCTTTTTGTCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDPCCCC*VFLSPF Trigger: GAAAGGAGACAAAAAGACCCAGCAGCAGCAGCAGGG...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR TCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCAGCTTTCGAAGCTCTGTaGAACTTAATTATATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSAAFEAL*NLIICQ Trigger: CTGGCATATAATTAAGTTTCACAGAGCTTCGAAAGC...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| CDS-3UTR TCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACCTGCATGGCCTGCTCTaGGGTAATTCGCTTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDLHGLL*GNSLYW Trigger: CCAATAAAGCGAATTACCTCAGAGCAGGCCATGCAG...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACGAGATGACGTTTGGGTaGTTAAGCTCTCGGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHEMTFG*LSSRSN Trigger: ATTACTCCGAGAGCTTAAGCACCCAAACGTCATCTC...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| CDS-3UTR GCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCAAGCCCAAATATCAATTaGTTTGGTATAATGTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSASPNIN*FGIMSR Trigger: GCGCGACATTATACCAAAGCAATTGATATTTGGGCT...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031640.15 |
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| CDS-3UTR GCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACTTGTTGCCCTGCTGCTaGTGCTGGGTCTTTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDLLPCC*CWVFLS Trigger: AGACAAAAAGACCCAGCAGCAGCAGCAGGGCAACAA...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR CCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACAAGCAGCATGTGGATTaGAACGCTGATAGTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDKQHVD*NADSRR Trigger: CCTCCGACTATCAGCGTTCCAATCCACATGCTGCTT...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR GCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACTGCCTCGACCAACTTTaGAGCCCTCGTATTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDCLDQL*SPRIQT Trigger: TGTTTGAATACGAGGGCTGCAAAGTTGGTCGAGGCA...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000162494.8 |
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| CDS-3UTR GCA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCAAAATATACACCCAATTaGTTTGGTATAATGTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSRECRSQSCSMSNSAKYTPN*FGIMSR Trigger: GCGCGACATTATACCAAAGCAATTGGGTGTATATTT...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161181.8 |
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| CDS-3UTR TCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACACTTTCCGATCAGCATaGGACAGAAACACCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDTFRSA*DRNTFR Trigger: TCTGAAGGTGTTTCTGTCTCATGCTGATCGGAAAGT...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| CDS-3UTR TCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACGCTTTCGAAGCTCTGTaGAACTTAATTATATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHAFEAL*NLIICQ Trigger: CTGGCATATAATTAAGTTTCACAGAGCTTCGAAAGC...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
||
| CDS-3UTR GCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCAGACGTGCCCGTAAGTaGCTCGACCAACTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHGGRHSCFCIQKACSQIRRARK*LDQLCS Trigger: GCTGCAAAGTTGGTCGAGGCACTTACGGGCACGTCT...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000162494.8 |
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| CDS-3UTR GCA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACCTGAAGCAAGTGGAATaGTTTACTATCGGGTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHLKQVE*FTIGFN Trigger: GTTAAACCCGATAGTAAAGCATTCCACTTGCTTCAG...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR CCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACATCCCATCTAGGATCTaGTACAACAGTGACTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDIPSRI*YNSDFT Trigger: GGTGAAGTCACTGTTGTACCAGATCCTAGATGGGAT...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| CDS-3UTR GCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTAGACGTGCCCGTAAGTaGCTCGACCAACTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTRRARK*LDQLCS Trigger: GCTGCAAAGTTGGTCGAGGCACTTACGGGCACGTCT...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000162494.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACTGCTATCTCTCTGCATaGCGACATAGAAATTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDCYLSA*RHRNSS Trigger: ACTGGAATTTCTATGTCGGCATGCAGAGAGATAGCA...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000162494.8 |
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| CDS-3UTR GCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCTTGCCCTGCTGCTGCTaGTGGGTCTTTTTGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHGGRHSCFCIQKACSQILPCCC*WVFLSP Trigger: AGGAGACAAAAAGACCCAGCAGCAGCAGCAGGGCAA...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR CCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTCCAGTTCCGTTAGTGTaGTTGTTGCCCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTPVPLV*LLPCCC Trigger: GCAGCAGCAGGGCAACAACCACACTAACGGAACTGG...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR TCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTGATCTGGTACAACAGTaGCTTCACCATTCCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTDLVQQ*LHHSPR Trigger: CCTCGGGGAATGGTGAAGTCACTGTTGTACCAGATC...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
||
| CDS-3UTR GCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTTGGTTGTTGCCCTGCTaGTGCTGCTGGGTCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTWLLPC*CCWVFL Trigger: CAAAAAGACCCAGCAGCAGCAGCAGGGCAACAACCA...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR CCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCAAGGGAGATGACGTTTaGGTGCTTAAGCTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PHGGRHSCFCIQKACSQIKGDDV*VLKLSE Trigger: CTCCGAGAGCTTAAGCACCCAAACGTCATCTCCCTT...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGGGATATGGGATCTGACAACCGGCGAAAACATCTGACGTGGGAAGTGGGTGAACTGGCTTCTTGTTaGCTTTCGAAGCTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VWDMGSDNRRKHLTWEVGELASC*LSKLCE Trigger: TTCACAGAGCTTCGAAAGCCAACAAGAAGCCAGTTC...ACCCACTTCCCACGTCAGATGTTTTCGCCGGTTGTCAGATCCCATATCCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGGGATATGGGATCTGACAACCGGCGAAAACATCTGACGTGGGAAGTGGGTATCCCATCTAGGATCTaGTACAACAGTGACTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VWDMGSDNRRKHLTWEVGIPSRI*YNSDFT Trigger: GGTGAAGTCACTGTTGTACCAGATCCTAGATGGGAT...ACCCACTTCCCACGTCAGATGTTTTCGCCGGTTGTCAGATCCCATATCCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
||
| CDS-3UTR CCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTCCCTGCTGCTGCTGCTaGGTCTTTTTGTCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTPCCCC*VFLSPF Trigger: GAAAGGAGACAAAAAGACCCAGCAGCAGCAGCAGGG...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR GCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTTTGTTGCCCTGCTGCTaGTGCTGGGTCTTTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTLLPCC*CWVFLS Trigger: AGACAAAAAGACCCAGCAGCAGCAGCAGGGCAACAA...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
||
| CDS-3UTR TCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCACTTTCCGATCAGCATaGGACAGAAACACCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHGGRHSCFCIQKACSQITFRSA*DRNTFR Trigger: TCTGAAGGTGTTTCTGTCTCATGCTGATCGGAAAGT...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
||
| CDS-3UTR GCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCGAGATGACGTTTGGGTaGTTAAGCTCTCGGAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: PHGGRHSCFCIQKACSQIEMTFG*LSSRSN Trigger: ATTACTCCGAGAGCTTAAGCACCCAAACGTCATCTC...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| CDS-3UTR CCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTATCCCATCTAGGATCTaGTACAACAGTGACTTCACC | + |
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Preference number: 4 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTIPSRI*YNSDFT Trigger: GGTGAAGTCACTGTTGTACCAGATCCTAGATGGGAT...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| CDS-3UTR CCA 90 bp | CCTCACGGAGGTCGCCACTCATGCTTTTGTATTCAGAAAGCATGCTCACAAATCGGTAATTCGCTTTATTaGGTCCATAGTGAGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: PHGGRHSCFCIQKACSQIGNSLY*VHSEQL Trigger: AAGTTGCTCACTATGGACCCAATAAAGCGAATTACC...GATTTGTGAGCATGCTTTCTGAATACAAAAGCATGAGTGGCGACCTCCGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR CCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTAATTCGCTTTATTaGGTCCATAGTGAGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTGNSLY*VHSEQL Trigger: AAGTTGCTCACTATGGACCCAATAAAGCGAATTACC...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR CCA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTAAATATCAATTGCTTTaGTATAATGTCGCGCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTKYQLL*YNVALR Trigger: TCGGAGCGCGACATTATACCAAAGCAATTGATATTT...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031640.15 |
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| 3UTR CAA 72 bp | GGAAAAGAAAACCCTGTCTGCAACACTCATTTCAGTTaGCTGAACCAACAGGCTTCTATCAATGACAACATA | + |
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Preference number: 4 (lower is better) Translates to: GKENPVCNTHFS*LNQQASINDNI Trigger: TATGTTGTCATTGATAGAAGCCTGTTGGTTCAGCAAACTGAAATGAGTGTTGCAGACAGGGTTTTCTTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 ENSMUST00000162494.8 |
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| CDS-3UTR CAA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCAGTGCCTCGACCAACTTaGCAGCCCTCGTATTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: TPGSRECRSQSCSMSNSAVPRPT*QPSYSN Trigger: GTTTGAATACGAGGGCTGCAAAGTTGGTCGAGGCAC...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000162494.8 |
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| CDS-3UTR CAA 90 bp | ACACCAGGTTCCCGCGAGTGCCGCAGCCAGTCCTGCAGCATGAGCAACAGTGCAGTCGACAGTGAAATATaGGTTCTGACGTTAGTAGTT | + |
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Preference number: 5 (lower is better) Translates to: TPGSRECRSQSCSMSNSAVDSEI*VLTLVV Trigger: AACTACTAACGTCAGAACCAATATTTCACTGTCGAC...TGCACTGTTGCTCATGCTGCAGGACTGGCTGCGGCACTCGCGGGAACCTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR CAA 90 bp | ACCTGGAAGCTACCACCCCAATCTGTGACAACTGGTGGAACTCGGCTACTGGACTGCTGCTGGGTCTTTTaGTCTCCTTTCTCATCAGGC | + |
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Preference number: 5 (lower is better) Translates to: TWKLPPQSVTTGGTRLLDCCWVF*SPFSSG Trigger: GCCTGATGAGAAAGGAGACAAAAAGACCCAGCAGCA...GTCCAGTAGCCGAGTTCCACCAGTTGTCACAGATTGGGGTGGTAGCTTCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR CAA 90 bp | GTTTGGGATATGGGATCTGACAACCGGCGAAAACATCTGACGTGGGAAGTGGGTGTGCCTCGACCAACTTaGCAGCCCTCGTATTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: VWDMGSDNRRKHLTWEVGVPRPT*QPSYSN Trigger: GTTTGAATACGAGGGCTGCAAAGTTGGTCGAGGCAC...ACCCACTTCCCACGTCAGATGTTTTCGCCGGTTGTCAGATCCCATATCCCAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162494.8 |
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| CDS-3UTR CAA 90 bp | GCTTCAAATCAGGACAGAAGAGTGCGGACTGACGCCGTGCCTCGCAGAGGTCACTTGATAAGGCTGCAATaGGTATACGTATTTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: ASNQDRRVRTDAVPRRGHLIRLQ*VYVFLL Trigger: CAGAAGAAATACGTATACCAATTGCAGCCTTATCAA...GTGACCTCTGCGAGGCACGGCGTCAGTCCGCACTCTTCTGTCCTGATTTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR CAA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTTGCTGCTGGGTCTTTTaGTCTCCTTTCTCATCAGGC | + |
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Preference number: 5 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTCCWVF*SPFSSG Trigger: GCCTGATGAGAAAGGAGACAAAAAGACCCAGCAGCA...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031640.15 ENSMUST00000161181.8 |
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| CDS-3UTR CAA 90 bp | CTAACTCCAAACTTAGGTACAACCTGGAAGCTACCACCCCAATCTGTGACAACTCAAATATACACCCAATaGCTTTGGTATAATGTCGCG | + |
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Preference number: 5 (lower is better) Translates to: LTPNLGTTWKLPPQSVTTQIYTQ*LWYNVA Trigger: CGCGACATTATACCAAAGCAATTGGGTGTATATTTG...AGTTGTCACAGATTGGGGTGGTAGCTTCCAGGTTGTACCTAAGTTTGGAGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161181.8 |
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