Pregenerated sensors for CDK6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040274Ensembl transcript IDs: ENSMUST00000042410.5, ENSMUST00000165117.8, ENSMUST00000197385.2
Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGATGGCTGAGGTGCAGCAGGTCACTGGTCCTCCCACAATATCCTaGTTGGCCTGGCTCCGCTGCCCCGCCCCCTGTCATTCAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: QMAEVQQVTGPPTIS*LAWLRCPAPCHSAG Trigger: TCCTGCTGAATGACAGGGGGCGGGGCAGCGGAGCCAGGCCAAGCAGGATATTGTGGGAGGACCAGTGACCTGCTGCACCTCAGCCATCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | CACAGGGTTCACAGGCCATTCAGAGAAAGGTCTTGGGGGTGGGAGTaGGGGACCTGGCAGGCCAACCTGGTAACTCCATCTGGAGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: HRVHRPFRERSWGWE*GTWQANLVTPSGGH Trigger: GTGCCCTCCAGATGGAGTTACCAGGTTGGCCTGCCAGGTCCCCCACTCCCACCCCCAAGACCTTTCTCTGAATGGCCTGTGAACCCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR GCA 90 bp | GTGGCACGGCACCCCAGCACACGATGCTCTTCTGTGCCTAACACTTaGCCGTTAACCTTCAGCTCAGGACAGAAACCACAGCAGGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: VARHPSTRCSSVPNT*PLTFSSGQKPQQGN Trigger: GTTGCCCTGCTGTGGTTTCTGTCCTGAGCTGAAGGTTAACGGGCAAGTGTTAGGCACAGAAGAGCATCGTGTGCTGGGGTGCCGTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | ATACAGCACAGGGTTCACAGGCCATTCAGAGAAAGGTCTTGGGGGTaGGAGTGGGGGACCTGGCAGGCCAACCTGGTAACTCCATCTGGA | + |
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Preference number: 1 (lower is better) Translates to: IQHRVHRPFRERSWG*EWGTWQANLVTPSG Trigger: TCCAGATGGAGTTACCAGGTTGGCCTGCCAGGTCCCCCACTCCCACCCCCAAGACCTTTCTCTGAATGGCCTGTGAACCCTGTGCTGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | AGATGTTTGAGATATGCAATCCTACCTTGCAGAGGCGGGAGGCTGTaGGCACCAGCCCCTCCTGGCCTGTATAACTGGACTGAGCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: RCLRYAILPCRGGRL*APAPPGLYNWTEPV Trigger: GACAGGCTCAGTCCAGTTATACAGGCCAGGAGGGGCTGGTGCCCACAGCCTCCCGCCTCTGCAAGGTAGGATTGCATATCTCAAACATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | GTCAGGCTCAGGAACTCCAGAATGGTGGCAGACCCAGGGGACCCTTaGCCTTTCACTGAGGGGCTTAACCTGAGATCTGCTTCAGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: VRLRNSRMVADPGDP*PFTEGLNLRSASVR Trigger: TCTCACTGAAGCAGATCTCAGGTTAAGCCCCTCAGTGAAAGGCCAAGGGTCCCCTGGGTCTGCCACCATTCTGGAGTTCCTGAGCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | CTCAGAGGACAGCTCTGTGTTTCTCGAGCACCCTGCTTCCTAAGATaGCACAACAGATGGCTGAGGTGCAGCAGGTCACTGGTCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: LRGQLCVSRAPCFLR*HNRWLRCSRSLVLP Trigger: TGGGAGGACCAGTGACCTGCTGCACCTCAGCCATCTGTTGTGCCATCTTAGGAAGCAGGGTGCTCGAGAAACACAGAGCTGTCCTCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | GGTGTGGGATTGGGGCAGCTGGGCCATCTGTCGTTAGCCAGGCAGTaGCAGGAAAATGAATTAGAAGTGCTGGTGGTTGAGAGCTTCGCA | + |
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Preference number: 1 (lower is better) Translates to: GVGLGQLGHLSLARQ*QENELEVLVVESFA Trigger: TGCGAAGCTCTCAACCACCAGCACTTCTAATTCATTTTCCTGCCACTGCCTGGCTAACGACAGATGGCCCAGCTGCCCCAATCCCACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | CCAGGAAAGGTAGGGTCGCCAGAGGAGATACGTCACATTCACCCTTaGATACAGCACAGGGTTCACAGGCCATTCAGAGAAAGGTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: PGKVGSPEEIRHIHP*IQHRVHRPFRERSW Trigger: CCAAGACCTTTCTCTGAATGGCCTGTGAACCCTGTGCTGTATCCAAGGGTGAATGTGACGTATCTCCTCTGGCGACCCTACCTTTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR GCA 90 bp | TACACACACAGAACAAGCACTCTTCACTGCCTAGGTGACCTCAGCTaGGGCAGGGGGAAGACTGTATTACAAAGGCACAAGGGGATACTG | + |
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Preference number: 1 (lower is better) Translates to: YTHRTSTLHCLGDLS*GRGKTVLQRHKGIL Trigger: CAGTATCCCCTTGTGCCTTTGTAATACAGTCTTCCCCCTGCCGCAGCTGAGGTCACCTAGGCAGTGAAGAGTGCTTGTTCTGTGTGTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR GCA 90 bp | GACTCACACCTTGCACCAGGCAGCTTCCCCACTGTGGCAGATGAATaGACGGACACCTTCCTTAGGATGTACTTGGATGTAAGTATGCAC | + |
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Preference number: 1 (lower is better) Translates to: DSHLAPGSFPTVADE*TDTFLRMYLDVSMH Trigger: GTGCATACTTACATCCAAGTACATCCTAAGGAAGGTGTCCGTGCATTCATCTGCCACAGTGGGGAAGCTGCCTGGTGCAAGGTGTGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | ACACTCGAGACAGAGGCAAGTGGATCTCTGAGTTTGAGGCTAGCCTaGTCTACAGAGCAAGTTCTAGGACAGCCAGGGCCACATAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: TLETEASGSLSLRLA*STEQVLGQPGPHRE Trigger: TTCTCTATGTGGCCCTGGCTGTCCTAGAACTTGCTCTGTAGACCAGGCTAGCCTCAAACTCAGAGATCCACTTGCCTCTGTCTCGAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | GTATTTCTCATCACATGCTTGATGCCTAACTTTCAGCCAAGGAGATaGGAAGCACCAAAGGGACAGGTCAGGGTAGTGGTAGGGAGCACC | + |
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Preference number: 1 (lower is better) Translates to: VFLITCLMPNFQPRR*EAPKGQVRVVVGST Trigger: GGTGCTCCCTACCACTACCCTGACCTGTCCCTTTGGTGCTTCCCATCTCCTTGGCTGAAAGTTAGGCATCAAGCATGTGATGAGAAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | ATCTGTTACCCTCCAAATTTCCTGCCGGTCTCCTCTCCTGCCCTGTaGCATAGAATGAACACTGTAGCTCTCTCTAGGGAAGTCCCATGT | + |
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Preference number: 1 (lower is better) Translates to: ICYPPNFLPVSSPAL*HRMNTVALSREVPC Trigger: ACATGGGACTTCCCTAGAGAGAGCTACAGTGTTCATTCTATGTCACAGGGCAGGAGAGGAGACCGGCAGGAAATTTGGAGGGTAACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR GCA 90 bp | ACAGTCGGTAGTAGTCTATACACACACAGAACAAGCACTCTTCACTaGCTAGGTGACCTCAGCTGCGGCAGGGGGAAGACTGTATTACAA | + |
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Preference number: 1 (lower is better) Translates to: TVGSSLYTHRTSTLH*LGDLSCGRGKTVLQ Trigger: TTGTAATACAGTCTTCCCCCTGCCGCAGCTGAGGTCACCTAGGCAGTGAAGAGTGCTTGTTCTGTGTGTGTATAGACTACTACCGACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | TCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGGGCTTTaGAGAGCAACCTTAGAGATATCCTTTTATGCTTTCCCTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SSAPRTGAKAFSSGL*RATLEISFYAFPQE Trigger: TTCCTGAGGGAAAGCATAAAAGGATATCTCTAAGGTTGCTCTTCAAAGCCCTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | TGGAGACAGCTAGATGGTATTCCCGCCTCTAGTCAGAGCAGGAAGTaGTTCCCTAAGGTGACAAGGTATCAAGGTATCAAGAGACGTGAA | + |
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Preference number: 1 (lower is better) Translates to: WRQLDGIPASSQSRK*FPKVTRYQGIKRRE Trigger: TTCACGTCTCTTGATACCTTGATACCTTGTCACCTTAGGGAATCACTTCCTGCTCTGACTAGAGGCGGGAATACCATCTAGCTGTCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | AACCCAACCCAACCCAACTCCAAACTACCTTCCATCCCCACCATTTaGACTTGGAATTGCTGCAACAGTATTTTGGTAGATGCTGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: NPTQPNSKLPSIPTI*TWNCCNSILVDAGG Trigger: CCCTCCAGCATCTACCAAAATACTGTTGCAGCAATTCCAAGTTCAAATGGTGGGGATGGAAGGTAGTTTGGAGTTGGGTTGGGTTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | GCAGGAAGATGCAGATACAGTGTGGGGATGCTAGACTCTTGGGGCTaGCTTACACAACCTAGATTAGCATCTAATGGGTGTGATTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: AGRCRYSVGMLDSWG*LTQPRLASNGCDFY Trigger: GTAGAAATCACACCCATTAGATGCTAATCTAGGTTGTGTAAGCCAGCCCCAAGAGTCTAGCATCCCCACACTGTATCTGCATCTTCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | GTTTTATTGCTAGGATGGACTGCTTCTGTATACAGAATGTATGCCTaGAATCTGAAAACACGGGCAGGAAGCCTCAAGGCATACGCTACC | + |
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Preference number: 1 (lower is better) Translates to: VLLLGWTASVYRMYA*NLKTRAGSLKAYAT Trigger: GGTAGCGTATGCCTTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAGGCATACATTCTGTATACAGAAGCAGTCCATCCTAGCAATAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | AGCTCAGGACAGAAACCACAGCAGGGCAACTGCCTTTTGAGTTGTTaGGGATTCCTAGGTTTTATTGCTAGGATGGACTGCTTCTGTATA | + |
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Preference number: 1 (lower is better) Translates to: SSGQKPQQGNCLLSC*GFLGFIARMDCFCI Trigger: TATACAGAAGCAGTCCATCCTAGCAATAAAACCTAGGAATCCCCAACAACTCAAAAGGCAGTTGCCCTGCTGTGGTTTCTGTCCTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | TTTCTAGGCCCTAGCAAAAATGTCTGTATTTTGGACCTTGTTCAATaGCAAGGCAGAACTCGCTGTCCAAGTGAGACCTCGAGTAGACCT | + |
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Preference number: 1 (lower is better) Translates to: FLGPSKNVCILDLVQ*QGRTRCPSETSSRP Trigger: AGGTCTACTCGAGGTCTCACTTGGACAGCGAGTTCTGCCTTGTCATTGAACAAGGTCCAAAATACAGACATTTTTGCTAGGGCCTAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | CAGGGTGGACGGCACAGCTTTCTATTCAAAGGAAAGTATTGTCTTTaGGATAGCAGCACCCTGTGCAACTTGGGGTCTTCATTTTTACTT | + |
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Preference number: 1 (lower is better) Translates to: QGGRHSFLFKGKYCL*DSSTLCNLGSSFLL Trigger: AAGTAAAAATGAAGACCCCAAGTTGCACAGGGTGCTGCTATCTCAAAGACAATACTTTCCTTTGAATAGAAAGCTGTGCCGTCCACCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | AAAGACAAGTTCAGGACATTCTTTAAAACTCAAAATGCTTGCTCCTaGCTTTCTCAAGCAAGTTGGCTAGCACCCATTGCAGGGTGGACG | + |
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Preference number: 1 (lower is better) Translates to: KDKFRTFFKTQNACS*LSQASWLAPIAGWT Trigger: CGTCCACCCTGCAATGGGTGCTAGCCAACTTGCTTGAGAAAGTCAGGAGCAAGCATTTTGAGTTTTAAAGAATGTCCTGAACTTGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | GCAATTATGCACCCAGAGGGAACGTGTACCCTGATGTCTGCACCGTaGAATCAAAATGGCAGAACGAATTTCAAGTATGAAAAAGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: AIMHPEGTCTLMSAP*NQNGRTNFKYEKAR Trigger: CCTTGCTTTTTCATACTTGAAATTCGTTCTGCCATTTTGATTTCACGGTGCAGACATCAGGGTACACGTTCCCTCTGGGTGCATAATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | CAAACAAGTGTACAAACGAACATAAAGCTGCAATCACCCTTGCATTaGTCTCTGAACAGTAAACTAGGTGGTTTCCTTGGTAAGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: QTSVQTNIKLQSPLH*SLNSKLGGFLGKAE Trigger: CTCTGCCTTACCAAGGAAACCACCTAGTTTACTGTTCAGAGATCAATGCAAGGGTGATTGCAGCTTTATGTTCGTTTGTACACTTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR GCA 90 bp | GGGATCTATTTTAACCATCCAGAGACTGAAGGTCAAACTCAGAGATaGTGGCGACCACAGGAATATTGCTGGCTAATATATGTTATTGCA | + |
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Preference number: 1 (lower is better) Translates to: GIYFNHPETEGQTQR*WRPQEYCWLIYVIA Trigger: TGCAATAACATATATTAGCCAGCAATATTCCTGTGGTCGCCAGCATCTCTGAGTTTGACCTTCAGTCTCTGGATGGTTAAAATAGATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | ACCAGTTCTTCCAGTATTTGTCGAGCACTGTGGTTCTTTAGAAAATaGTCTGCATACTCAGTTACAGATGCAGTGCTTCCTTTGTTCACT | + |
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Preference number: 1 (lower is better) Translates to: TSSSSICRALWFFRK*SAYSVTDAVLPLFT Trigger: AGTGAACAAAGGAAGCACTGCATCTGTAACTGAGTATGCAGACCATTTTCTAAAGAACCACAGTGCTCGACAAATACTGGAAGAACTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | GAGTTCTTTGGACAGAAGATTGAAACAACTGTGATGTTTGAAAGTTaGCATGATTTAACTCCCACAGTGACGATGGCTGTGACTGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: EFFGQKIETTVMFES*HDLTPTVTMAVTGF Trigger: AAAGCCAGTCACAGCCATCGTCACTGTGGGAGTTAAATCATGTCAACTTTCAAACATCACAGTTGTTTCAATCTTCTGTCCAAAGAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | ATTGTAAGAAGTACAAATGGTAAGGCAAATGCACAAACCATTCTCTaGTTTGCTTTCAACCAATTCGGCTGGCATACAAGTGAGGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: IVRSTNGKANAQTIL*FAFNQFGWHTSEAN Trigger: ATTGGCCTCACTTGTATGCCAGCCGAATTGGTTGAAAGCAAACCAGAGAATGGTTTGTGCATTTGCCTTACCATTTGTACTTCTTACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR TCA 90 bp | AGACATTACACTGACAACATACACTTAAAGATAGGAAACACCAAGTaGCAGTCGGTAGTAGTCTATACACACACAGAACAAGCACTCTTC | + |
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Preference number: 1 (lower is better) Translates to: RHYTDNIHLKIGNTK*QSVVVYTHTEQALF Trigger: GAAGAGTGCTTGTTCTGTGTGTGTATAGACTACTACCGACTGTCACTTGGTGTTTCCTATCTTTAAGTGTATGTTGTCAGTGTAATGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | ACATTTCCTAGTCTAAGAATAAGTCAAACAAAAAGCAGCTTACTGTaGTCTACAGCTTTGCTGAAGCCTCTAGAAGCTTTAACAAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: TFPSLRISQTKSSLL*STALLKPLEALTSP Trigger: GGGACTTGTTAAAGCTTCTAGAGGCTTCAGCAAAGCTGTAGACCACAGTAAGCTGCTTTTTGTTTGACTTATTCTTAGACTAGGAAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR GCA 90 bp | TGTGGTTCTTTAGAAAATGGTCTGCATACTCAGTTACAGATGCAGTaGTTCCTTTGTTCACTTGAGTTTAGAAATGACAGTGTCAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: CGSLENGLHTQLQMQ*FLCSLEFRNDSVKR Trigger: CCTTTTGACACTGTCATTTCTAAACTCAAGTGAACAAAGGAAGCACTGCATCTGTAACTGAGTATGCAGACCATTTTCTAAAGAACCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR GCA 90 bp | ACTATGCTAAACAAATCTCTGCCAGAAGCAATAGCTACAGAGTTCTaGTGCTTTGCCTCTTTTAATGTAAAAAGACACCTAGACACCAAA | + |
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Preference number: 1 (lower is better) Translates to: TMLNKSLPEAIATEF*CFASFNVKRHLDTK Trigger: TTTGGTGTCTAGGTGTCTTTTTACATTAAAAGAGGCAAAGCAGCAGAACTCTGTAGCTATTGCTTCTGGCAGAGATTTGTTTAGCATAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | ATCTATTTTAACCATCCAGAGACTGAAGGTCAAACTCAGAGATGCTaGCGACCACAGGAATATTGCTGGCTAATATATGTTATTGCATTT | + |
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Preference number: 1 (lower is better) Translates to: IYFNHPETEGQTQRC*RPQEYCWLIYVIAF Trigger: AAATGCAATAACATATATTAGCCAGCAATATTCCTGTGGTCGCCAGCATCTCTGAGTTTGACCTTCAGTCTCTGGATGGTTAAAATAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR GCA 90 bp | TCACTTTATCACATGGATGTTAATATAGAATGGATTAGGCCTCAATaGAGTGAGTTTTATGGTCGATTTCTAGGCCCTAGCAAAAATGTC | + |
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Preference number: 1 (lower is better) Translates to: SLYHMDVNIEWIRPQ*SEFYGRFLGPSKNV Trigger: GACATTTTTGCTAGGGCCTAGAAATCGACCATAAAACTCACTGCATTGAGGCCTAATCCATTCTATATTAACATCCATGTGATAAAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CCA 90 bp | TCCCCAAAGAAACAATTAAGTACATACTGTACTATATATAGGGCCTaGGACACATTAAGTTCAGCTTTCCAAAGAGTAAATAGAAGATGT | + |
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Preference number: 1 (lower is better) Translates to: SPKKQLSTYCTIYRA*DTLSSAFQRVNRRC Trigger: ACATCTTCTATTTACTCTTTGGAAAGCTGAACTTAATGTGTCCCAGGCCCTATATATAGTACAGTATGTACTTAATTGTTTCTTTGGGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR CAA 90 bp | ATGGCTGAGGTGCAGCAGGTCACTGGTCCTCCCACAATATCCTGCTaGGCCTGGCTCCGCTGCCCCGCCCCCTGTCATTCAGCAGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: MAEVQQVTGPPTISC*AWLRCPAPCHSAGV Trigger: TACTCCTGCTGAATGACAGGGGGCGGGGCAGCGGAGCCAGGCCAAGCAGGATATTGTGGGAGGACCAGTGACCTGCTGCACCTCAGCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR GCA 90 bp | ACGGTAAGCGTGCAAGCGGGTGTGGGATTGGGGCAGCTGGGCCATCTGTCGTTAGCAGCACAAGGCAGATaGGCCATGGTGGGTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: TVSVQAGVGLGQLGHLSLAAQGR*AMVGGG Trigger: TCCACCACCCACCATGGCGCATCTGCCTTGTGCTGC...TAACGACAGATGGCCCAGCTGCCCCAATCCCACACCCGCTTGCACGCTTACCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR CAA 90 bp | AGACAGGAGGCAGCACCTAGACGCCTGCTCTGCCTAGAATCCACTTaGCTGGCCACCTGGCACAGTCCCTTATTGAAGGCAACCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: RQEAAPRRLLCLEST*LATWHSPLLKATST Trigger: TGTAGAGGTTGCCTTCAATAAGGGACTGTGCCAGGTGGCCAGCAAAGTGGATTCTAGGCAGAGCAGGCGTCTAGGTGCTGCCTCCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR CCA 90 bp | GACCATCACTGCTTGGCTATGTGTCCCCTGAAAAACCAAAGCCCTACACTCAACCAAAGCCGGGCGTGGTaGCGCACGCCTTTGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: DHHCLAMCPLKNQSPTLNQSRAW*RTPLIP Trigger: TGGGATCAAAGGCGTGCGCCACCACGCCCGGCTTTG...GTTGAGTGTAGGGCTTTGGTTTTTCAGGGGACACATAGCCAAGCAGTGATGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR CCA 90 bp | GATAAATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGGAGGCGGCGGGCCACTaGGTGCTCTCAGGTACTCGG | + |
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Preference number: 2 (lower is better) Translates to: DKLTSIFISSKDGSKGLQEAAGH*VLSGTR Trigger: CCGAGTACCTGAGAGCACCCAGTGGCCCGCCGCCTC...CTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAATTTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAATCTGAAAACACGGGCAGGAAGCCTCAAGGCATACGCTACCAGTTCTGTCTAGGTGACCTCAGCTaGGGCAGGGGGAAGACTGTA | + |
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Preference number: 2 (lower is better) Translates to: LESENTGRKPQGIRYQFCLGDLS*GRGKTV Trigger: TACAGTCTTCCCCCTGCCGCAGCTGAGGTCACCTAG...ACAGAACTGGTAGCGTATGCCTTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGTCTTTAAAGAGGGGCTaGATAGGAGGCGGCGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: IDQYFHQLQGREQRPSAQSLKRG*IGGGGP Trigger: TGGCCCGCCGCCTCCTATTCAGCCCCTCTTTAAAGA...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTCTGTTCATCCCAGTGTACTGTCACTATTGGCTCAGGGGGCTGGGTCTCTGCCCAGAAACACATCCTaGGGACAGACAGAGAGATCA | + |
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Preference number: 2 (lower is better) Translates to: VSVHPSVLSLLAQGAGSLPRNTS*GQTERS Trigger: TGATCTCTCTGTCTGTCCGCAGGATGTGTTTCTGGG...CAGAGACCCAGCCCCCTGAGCCAATAGTGACAGTACACTGGGATGAACAGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCCAGGCAGTGGCAGGAAAATGAATTAGAAGTGCTGGTGGTTGAGAGCTTCAGCCCACCCAGAAGCTaGCAGCCAGAAGGTTGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LARQWQENELEVLVVESFSPPRS*QPEGWQ Trigger: CTGCCAACCTTCTGGCTGCCAGCTTCTGGGTGGGCT...GAAGCTCTCAACCACCAGCACTTCTAATTCATTTTCCTGCCACTGCCTGGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGGGATACTGTTAGGGTTTCGGAATGGGAGCCTACGCCCAAAGCATTCGGTAGTCAGAGCAGGAAGTaGTTCCCTAAGGTGACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: QGDTVRVSEWEPTPKAFGSQSRK*FPKVTR Trigger: CCTTGTCACCTTAGGGAATCACTTCCTGCTCTGACT...ACCGAATGCTTTGGGCGTAGGCTCCCATTCCGAAACCCTAACAGTATCCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | CTACACTGGCAGCATTCAAGGTTAGAAAACGAAATGGCAGCACAATTGGTCAGCAGCCCACCCAGAAGCTaGCAGCCAGAAGGTTGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LHWQHSRLENEMAAQLVSSPPRS*QPEGWQ Trigger: CTGCCAACCTTCTGGCTGCCAGCTTCTGGGTGGGCT...GCTGACCAATTGTGCTGCCATTTCGTTTTCTAACCTTGAATGCTGCCAGTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCAAGGAGATGGGAAGCACCAAAGGGACAGGTCAGGGTAGTGGTAGGGAGCGCACCCTGTGCAACTTaGGGTCTTCATTTTTACTTA | + |
|
Preference number: 2 (lower is better) Translates to: QPRRWEAPKGQVRVVVGSAPCAT*GLHFYL Trigger: TAAGTAAAAATGAAGACCCCAAGTTGCACAGGGTGC...GCTCCCTACCACTACCCTGACCTGTCCCTTTGGTGCTTCCCATCTCCTTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAATCTGAAAACACGGGCAGGAAGCCTCAAGGCATACGCTACCAGTTCTGTATTGGCTCAGGGGGCTaGGTCTCTGAGAAAAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LESENTGRKPQGIRYQFCIGSGG*VSEKSV Trigger: CACACTTTTCTCAGAGACCCAGCCCCCTGAGCCAAT...ACAGAACTGGTAGCGTATGCCTTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAATCTGAAAACACGGGCAGGAAGCCTCAAGGCATACGCTACCAGTTCTGTCCCTGCTTCCTAAGATaGCACAACAGATGGCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LESENTGRKPQGIRYQFCPCFLR*HNRWLR Trigger: CCTCAGCCATCTGTTGTGCCATCTTAGGAAGCAGGG...ACAGAACTGGTAGCGTATGCCTTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 90 bp | TTTAGTTCAAGCACACTCGAGACAGAGGCAAGTGGATCTCTGAGTTaGAGGCTAGCCTGGTCTACAGAGCAAGTTCTAGGACAGCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FSSSTLETEASGSLS*RLAWSTEQVLGQPG Trigger: CCCTGGCTGTCCTAGAACTTGCTCTGTAGACCAGGCTAGCCTCAAACTCAGAGATCCACTTGCCTCTGTCTCGAGTGTGCTTGAACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 90 bp | TCCTCATTTGAGACCACTATCACTAATCATTCCAGGACTCACACCTaGCACCAGGCAGCTTCCCCACTGTGGCAGATGAATGCACGGACA | + |
|
Preference number: 2 (lower is better) Translates to: SSFETTITNHSRTHT*HQAASPLWQMNART Trigger: TGTCCGTGCATTCATCTGCCACAGTGGGGAAGCTGCCTGGTGCAAGGTGTGAGTCCTGGAATGATTAGTGATAGTGGTCTCAAATGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTGAAGCCTCTAGAAGCTTTAACAAGTCCCTGTGGGAATACAGAAACAATAGGTGGCGCACGCCTTTaGTCCCAGCACTTGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LLKPLEALTSPCGNTETIGGARL*SQHLGG Trigger: GCCTCCCAAGTGCTGGGATCAAAGGCGTGCGCCACC...TATTGTTTCTGTATTCCCACAGGGACTTGTTAAAGCTTCTAGAGGCTTCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR TCA 90 bp | GACCATCACTGCTTGGCTATGTGTCCCCTGAAAAACCAAAGCCCTACACTCAACAATCTTCAACTGCTCTaGGAGGCTTGCTTAGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: DHHCLAMCPLKNQSPTLNNLQLL*EACLGD Trigger: GTCCCCTAAGCAAGCCTCTCAGAGCAGTTGAAGATT...GTTGAGTGTAGGGCTTTGGTTTTTCAGGGGACACATAGCCAAGCAGTGATGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACAGAAACCACAGCAGGGCAACTGCCTTTTGAGTTGTTGGGGATTCCTAGGTCTTTCTGCCATGGTGTaGTACTGTGTCTGTTCATCC | + |
|
Preference number: 2 (lower is better) Translates to: GQKPQQGNCLLSCWGFLGLSAMV*YCVCSS Trigger: GGATGAACAGACACAGTACCACACCATGGCAGAAAG...ACCTAGGAATCCCCAACAACTCAAAAGGCAGTTGCCCTGCTGTGGTTTCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 90 bp | TTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGGGCTTaGAAGAGCAACCTTAGAGATATCCTTTTATGCTTTCCCTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FISSKDGSKGLQLRA*KSNLRDILLCFPSG Trigger: TCCTGAGGGAAAGCATAAAAGGATATCTCTAAGGTTGCTCTTCAAAGCCCTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGTGTGAGCAAACGGAATaGGAGCAATTATGCACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: IDQYFHQLQGREQRPSAQCEQTE*EQLCTQ Trigger: CTGGGTGCATAATTGCTCTCATTCCGTTTGCTCACA...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTGAAGCCTCTAGAAGCTTTAACAAGTCCCTGTGGGAATACAGAAACAATAGCAGCACAAGGCAGATaGGCCATGGTGGGTGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLKPLEALTSPCGNTETIAAQGR*AMVGGG Trigger: TCCACCACCCACCATGGCGCATCTGCCTTGTGCTGC...TATTGTTTCTGTATTCCCACAGGGACTTGTTAAAGCTTCTAGAGGCTTCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCAAGGAGATGGGAAGCACCAAAGGGACAGGTCAGGGTAGTGGTAGGGAGCAAACAAATAACCACATaGATTGTTCAGCTACGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QPRRWEAPKGQVRVVVGSKQITT*IVQLRE Trigger: TTCTCGTAGCTGAACAATGCATGTGGTTATTTGTTT...GCTCCCTACCACTACCCTGACCTGTCCCTTTGGTGCTTCCCATCTCCTTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGTTGTCTATTCTCAGCTaGACGAGAGGCAAAGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: IDQYFHQLQGREQRPSAQLSILS*TRGKGL Trigger: AAGGCCTTTGCCTCTCGTGCAGCTGAGAATAGACAA...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 90 bp | CAACCCAACCCAACCCAACTCCAAACTACCTTCCATCCCCACCATTaGAACTTGGAATTGCTGCAACAGTATTTTGGTAGATGCTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QPNPTQLQTTFHPHH*NLELLQQYFGRCWR Trigger: CCTCCAGCATCTACCAAAATACTGTTGCAGCAATTCCAAGTTCAAATGGTGGGGATGGAAGGTAGTTTGGAGTTGGGTTGGGTTGGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 90 bp | TTAACCTTCAGCTCAGGACAGAAACCACAGCAGGGCAACTGCCTTTaGAGTTGTTGGGGATTCCTAGGTTTTATTGCTAGGATGGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: LTFSSGQKPQQGNCL*SCWGFLGFIARMDC Trigger: GCAGTCCATCCTAGCAATAAAACCTAGGAATCCCCAACAACTCAAAAGGCAGTTGCCCTGCTGTGGTTTCTGTCCTGAGCTGAAGGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR GCA 90 bp | CCATCTAAGGATAAGCGGCACACAGTAAGCTCTTCAGTTTACTCTATGTTTCCCACAAGCACTCTTCACTaGCTAGGTGACCTCAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PSKDKRHTVSSSVYSMFPTSTLH*LGDLSC Trigger: GCAGCTGAGGTCACCTAGGCAGTGAAGAGTGCTTGT...GGGAAACATAGAGTAAACTGAAGAGCTTACTGTGTGCCGCTTATCCTTAGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR GCA 90 bp | GATAAATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGATCTGGAGCCTACACTaGCGTGTGAAACATCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: DKLTSIFISSKDGSKGLQIWSLH*RVKHQA Trigger: TGCCTGATGTTTCACACGGCAGTGTAGGCTCCAGAT...CTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAATTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAATCTGAAAACACGGGCAGGAAGCCTCAAGGCATACGCTACCAGTTCTGTGAGATGTTTGAGATATaGAATCCTACCTTGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LESENTGRKPQGIRYQFCEMFEI*NPTLQR Trigger: CCTCTGCAAGGTAGGATTGCATATCTCAAACATCTC...ACAGAACTGGTAGCGTATGCCTTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATCTAAGGATAAGCGGCACACAGTAAGCTCTTCAGTTTACTCTATGTTTCCCGTTAGGGTTTCGGAATaGGAGCCTACGCCCAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PSKDKRHTVSSSVYSMFPVRVSE*EPTPKA Trigger: TGCTTTGGGCGTAGGCTCCCATTCCGAAACCCTAAC...GGGAAACATAGAGTAAACTGAAGAGCTTACTGTGTGCCGCTTATCCTTAGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR CAA 90 bp | CCCACTGTGGCAGATGAATGCACGGACACCTTCCTTAGGATGTACTaGGATGTAAGTATGCACAGGATAAGGGGTTTTTGTAAGGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: PTVADECTDTFLRMY*DVSMHRIRGFCKDA Trigger: TGCATCCTTACAAAAACCCCTTATCCTGTGCATACTTACATCCAAGTACATCCTAAGGAAGGTGTCCGTGCATTCATCTGCCACAGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGTGCTTTAAGAAAATGTaGGCCACTTCTGTGCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: IDQYFHQLQGREQRPSAQCFKKM*ATSVLI Trigger: GATGAGCACAGAAGTGGCTCACATTTTCTTAAAGCA...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGGGGATACTGTTAGGGTTTCGGAATGGGAGCCTACGCCCAAAGCATTCGGTACACCAGAAAACAGGTaGTCTCTATCTTTAAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: QGDTVRVSEWEPTPKAFGTPENR*SLSLKP Trigger: AGGTTTTAAAGATAGAGAGCACCTGTTTTCTGGTGT...ACCGAATGCTTTGGGCGTAGGCTCCCATTCCGAAACCCTAACAGTATCCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAATCTGAAAACACGGGCAGGAAGCCTCAAGGCATACGCTACCAGTTCTGTAGAGCTTCAGATGGCTaGTTTCTTCCTATGAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: LESENTGRKPQGIRYQFCRASDG*FLPMKQ Trigger: TTGTTTCATAGGAAGAAAGCAGCCATCTGAAGCTCT...ACAGAACTGGTAGCGTATGCCTTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR GCA 90 bp | AGAATAAGTCAAACAAAAAGCAGCTTACTGTGGTCTACAGCTTTGCTGAAGCCTAACAGATGGCTGAGGTaGAGCAGGTCACTGGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: RISQTKSSLLWSTALLKPNRWLR*SRSLVL Trigger: GAGGACCAGTGACCTGCTGCACCTCAGCCATCTGTT...AGGCTTCAGCAAAGCTGTAGACCACAGTAAGCTGCTTTTTGTTTGACTTATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCCAGGCAGTGGCAGGAAAATGAATTAGAAGTGCTGGTGGTTGAGAGCTTCATTCCCACCCTACACTaGCAGCATTCAAGGTTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LARQWQENELEVLVVESFIPTLH*QHSRLE Trigger: TTCTAACCTTGAATGCTGCCAGTGTAGGGTGGGAAT...GAAGCTCTCAACCACCAGCACTTCTAATTCATTTTCCTGCCACTGCCTGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAATCTGAAAACACGGGCAGGAAGCCTCAAGGCATACGCTACCAGTTCTGTAGTCAGCTGTCATGGTaGTGCATGTCTTTAGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LESENTGRKPQGIRYQFCSQLSW*CMSLVL Trigger: TAAAACTAAAGACATGCACCACCATGACAGCTGACT...ACAGAACTGGTAGCGTATGCCTTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGACTCCATTGTGAATCACCTTTCACTGAACAAGCCCTTCTTACTATCAGTCAATCTTCAACTGCTCTaGGAGGCTTGCTTAGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: QDSIVNHLSLNKPFLLSVNLQLL*EACLGD Trigger: GTCCCCTAAGCAAGCCTCTCAGAGCAGTTGAAGATT...GACTGATAGTAAGAAGGGCTTGTTCAGTGAAAGGTGATTCACAATGGAGTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGAATCTGAAAACACGGGCAGGAAGCCTCAAGGCATACGCTACCAGTTCTGTCAGAATGTAAAGGACTaGAAGAAAACAGTAAGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: LESENTGRKPQGIRYQFCQNVKD*KKTVRY Trigger: GTACCTTACTGTTTTCTTTCAGTCCTTTACATTCTG...ACAGAACTGGTAGCGTATGCCTTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGAATAGTCAGCTGTCATaGTGGTGCATGTCTTTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: IDQYFHQLQGREQRPSAQNSQLS*WCMSLV Trigger: AACTAAAGACATGCACCACCATGACAGCTGACTATT...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACAGAAACCACAGCAGGGCAACTGCCTTTTGAGTTGTTGGGGATTCCTAGGTGAAGCTTCCTCTAAATaGGAAAATCCTCTTTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: GQKPQQGNCLLSCWGFLGEASSK*ENPLSV Trigger: AACAGAAAGAGGATTTTCCCATTTAGAGGAAGCTTC...ACCTAGGAATCCCCAACAACTCAAAAGGCAGTTGCCCTGCTGTGGTTTCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAATCTGAAAACACGGGCAGGAAGCCTCAAGGCATACGCTACCAGTTCTGTTGGTTCTTTAGAAAATaGTCTGCATACTCAGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: LESENTGRKPQGIRYQFCWFFRK*SAYSVT Trigger: TGTAACTGAGTATGCAGACCATTTTCTAAAGAACCA...ACAGAACTGGTAGCGTATGCCTTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| 3UTR-3UTR CCA 90 bp | AGAATAAGTCAAACAAAAAGCAGCTTACTGTGGTCTACAGCTTTGCTGAAGCCTACTTTGCTGGCCACCTaGCACAGTCCCTTATTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: RISQTKSSLLWSTALLKPTLLAT*HSPLLK Trigger: CTTCAATAAGGGACTGTGCCAGGTGGCCAGCAAAGT...AGGCTTCAGCAAAGCTGTAGACCACAGTAAGCTGCTTTTTGTTTGACTTATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGTGCCTTTTGAGTTGTTaGGGATTCCTAGGTTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: IDQYFHQLQGREQRPSAQCLLSC*GFLGFI Trigger: AATAAAACCTAGGAATCCCCAACAACTCAAAAGGCA...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR TCA 90 bp | GATAAATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGATGGCATTATTTGTGTaGCCTGACAATTCACACAGA | + |
|
Preference number: 2 (lower is better) Translates to: DKLTSIFISSKDGSKGLQMALFV*PDNSHR Trigger: TCTGTGTGAATTGTCAGGTCACACAAATAATGCCAT...CTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAATTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTCTCTTACACACACATACGCATGCACACACACTCACAAGTACCAAAGCAAAATGGCAGCACAATTaGTCAGCAGCTTCTCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SSLLHTHTHAHTLTSTKAKWQHN*SAASLL Trigger: AAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTT...TGCTTTGGTACTTGTGAGTGTGTGTGCATGCGTATGTGTGTGTAAGAGAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATCTAAGGATAAGCGGCACACAGTAAGCTCTTCAGTTTACTCTATGTTTCCCAAATGGCAGCACAATTaGTCAGCAGCTTCTCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PSKDKRHTVSSSVYSMFPKWQHN*SAASLL Trigger: AAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTT...GGGAAACATAGAGTAAACTGAAGAGCTTACTGTGTGCCGCTTATCCTTAGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CCA 90 bp | GATAAATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGACTATATATAGGGCCTaGGACACATTAAGTTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DKLTSIFISSKDGSKGLQTIYRA*DTLSSA Trigger: AGCTGAACTTAATGTGTCCCAGGCCCTATATATAGT...CTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAATTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCTCTCTTACACACACATACGCATGCACACACACTCACAAGTACCAAAGCACAATCACCCTTGCATTaGTCTCTGAACAGTAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: SSLLHTHTHAHTLTSTKAQSPLH*SLNSKL Trigger: TAGTTTACTGTTCAGAGATCAATGCAAGGGTGATTG...TGCTTTGGTACTTGTGAGTGTGTGTGCATGCGTATGTGTGTGTAAGAGAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CAA 90 bp | ATGCACATGATCCCTTTATCATGGTTTTTGGATAAGGCTTATAAGTaGTCTATTCTCAGCTGCACGAGAGGCAAAGGCCTTTTAAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: MHMIPLSWFLDKAYK*SILSCTRGKGLLNF Trigger: AAAGTTTAAAAGGCCTTTGCCTCTCGTGCAGCTGAGAATAGACAACTTATAAGCCTTATCCAAAAACCATGATAAAGGGATCATGTGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | GGTCCTCCCACAATATCCTGCTTGGCCTGGCTCCGCTaGCCCGCCCCCTGTCATTCAGCAGGAGTAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GPPTISCLAWLR*PAPCHSAGVGV Trigger: CACCCCTACTCCTGCTGAATGACAGGGGGCGGGGCAGCGGAGCCAGGCCAAGCAGGATATTGTGGGAGGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | GAGGTGCAGCAGGTCACTGGTCCTCCCACAATATCCTaGTTGGCCTGGCTCCGCTGCCCCGCCCCCTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: EVQQVTGPPTIS*LAWLRCPAPCH Trigger: ATGACAGGGGGCGGGGCAGCGGAGCCAGGCCAAGCAGGATATTGTGGGAGGACCAGTGACCTGCTGCACCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | TGCAGCAGGTCACTGGTCCTCCCACAATATCCTGCTTaGCCTGGCTCCGCTGCCCCGCCCCCTGTCATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CSRSLVLPQYPA*PGSAAPPPVIQ Trigger: CTGAATGACAGGGGGCGGGGCAGCGGAGCCAGGCCAAGCAGGATATTGTGGGAGGACCAGTGACCTGCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | GCACCCTGGGCCGTGGCACGGCACCCCAGCACACGATaGTCTTCTGTGCCTAACACTTGCCCGTTAACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: APWAVARHPSTR*SSVPNTCPLTF Trigger: GAAGGTTAACGGGCAAGTGTTAGGCACAGAAGAGCATCGTGTGCTGGGGTGCCGTGCCACGGCCCAGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | TTGTCCCAGAGGTTCCAGGCTGACTGTCTCGAGCGTTaGCAGTGTCGGCAGCAGAGCTGTGAGGACGAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: LSQRFQADCLER*QCRQQSCEDER Trigger: GCGCTCGTCCTCACAGCTCTGCTGCCGACACTGCCAACGCTCGAGACAGTCAGCCTGGAACCTCTGGGACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | CAGCACAGGGTTCACAGGCCATTCAGAGAAAGGTCTTaGGGGTGGGAGTGGGGGACCTGGCAGGCCAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: QHRVHRPFRERS*GWEWGTWQANL Trigger: CAGGTTGGCCTGCCAGGTCCCCCACTCCCACCCCCAAGACCTTTCTCTGAATGGCCTGTGAACCCTGTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | GTAACAGTCTCTACTGCTAACACGCACCCTGGGCCGTaGCACGGCACCCCAGCACACGATGCTCTTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VTVSTANTHPGP*HGTPAHDALLC Trigger: GCACAGAAGAGCATCGTGTGCTGGGGTGCCGTGCCACGGCCCAGGGTGCGTGTTAGCAGTAGAGACTGTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | AGGCTGTGGGCACCAGCCCCTCCTGGCCTGTATAACTaGACTGAGCCTGTCCATAGGAAGGAAACTGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RLWAPAPPGLYN*TEPVHRKETGG Trigger: CCCACCAGTTTCCTTCCTATGGACAGGCTCAGTCCAGTTATACAGGCCAGGAGGGGCTGGTGCCCACAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCAAGGAGATGGGAAGCACCAAAGGGACAGGTCAGGGTAGTGGTAGGGAGCCCAGGTGGCTATTTTTaGGAGGGGTCAGAGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: QPRRWEAPKGQVRVVVGSPGGYF*EGSEDQ Trigger: CTGGTCCTCTGACCCCTCCAAAAAATAGCCACCTGG...GCTCCCTACCACTACCCTGACCTGTCCCTTTGGTGCTTCCCATCTCCTTGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | GCCAGAAGGTTGGCAGCCAGCAATCTTCAACTGCTCTaGGAGGCTTGCTTAGGGGACTCGCAGCCGCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: ARRLAASNLQLL*EACLGDSQPPM Trigger: CATTGGCGGCTGCGAGTCCCCTAAGCAAGCCTCTCAGAGCAGTTGAAGATTGCTGGCTGCCAACCTTCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | CACTACACAAGGCAGCACAAGGCAGATGCGCCATGGTaGGTGGTGGAGACAGCTAGATGGTATTCCCGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HYTRQHKADAPW*VVETARWYSRL Trigger: GAGGCGGGAATACCATCTAGCTGTCTCCACCACCCACCATGGCGCATCTGCCTTGTGCTGCCTTGTGTAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | GGTTTCGGAATGGGAGCCTACGCCCAAAGCATTCGGTaGAAGACGGTAAGCGTGCAAGCGGGTGTGGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: GFGMGAYAQSIR*KTVSVQAGVGL Trigger: CAATCCCACACCCGCTTGCACGCTTACCGTCTTTCACCGAATGCTTTGGGCGTAGGCTCCCATTCCGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | ATCCCAGCACTTGGGAGGCAGAGGCAGGCGCATTTCTaGATTCGAGGCCAGCCTGGTCTACAGAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: IPALGRQRQAHF*IRGQPGLQSEF Trigger: GAACTCACTCTGTAGACCAGGCTGGCCTCGAATTCAGAAATGCGCCTGCCTCTGCCTCCCAAGTGCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | AGGAACTCCAGAATGGTGGCAGACCCAGGGGACCCTTaGCCTTTCACTGAGGGGCTTAACCTGAGATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RNSRMVADPGDP*PFTEGLNLRSA Trigger: AGCAGATCTCAGGTTAAGCCCCTCAGTGAAAGGCCAAGGGTCCCCTGGGTCTGCCACCATTCTGGAGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | TCTCGAGCACCCTGCTTCCTAAGATGGCACAACAGATaGCTGAGGTGCAGCAGGTCACTGGTCCTCCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: SRAPCFLRWHNR*LRCSRSLVLPQ Trigger: TTGTGGGAGGACCAGTGACCTGCTGCACCTCAGCCATCTGTTGTGCCATCTTAGGAAGCAGGGTGCTCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | GCTACCAGTTCTGTTCCTACAGAACACCCCTCACGCTaGTCCCTTCTCTACAGTACCACGTGTTCCCACCGC | + |
|
Preference number: 3 (lower is better) Translates to: ATSSVPTEHPSR*SLLYSTTCSHR Trigger: GCGGTGGGAACACGTGGTACTGTAGAGAAGGGATCAGCGTGAGGGGTGTTCTGTAGGAACAGAACTGGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | CCCTGCTTCCTAAGATGGCACAACAGATGGCTGAGGTaGAGCAGGTCACTGGTCCTCCCACAATATCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PCFLRWHNRWLR*SRSLVLPQYPA Trigger: AGCAGGATATTGTGGGAGGACCAGTGACCTGCTGCACCTCAGCCATCTGTTGTGCCATCTTAGGAAGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | AGGACTCACACCTTGCACCAGGCAGCTTCCCCACTGTaGCAGATGAATGCACGGACACCTTCCTTAGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: RTHTLHQAASPL*QMNARTPSLGC Trigger: ACATCCTAAGGAAGGTGTCCGTGCATTCATCTGCCACAGTGGGGAAGCTGCCTGGTGCAAGGTGTGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | CAGCTCTGTGTTTCTCGAGCACCCTGCTTCCTAAGATaGCACAACAGATGGCTGAGGTGCAGCAGGTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: QLCVSRAPCFLR*HNRWLRCSRSL Trigger: CAGTGACCTGCTGCACCTCAGCCATCTGTTGTGCCATCTTAGGAAGCAGGGTGCTCGAGAAACACAGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | CACCCCAGCACACGATGCTCTTCTGTGCCTAACACTTaGCCGTTAACCTTCAGCTCAGGACAGAAACCACAG | + |
|
Preference number: 3 (lower is better) Translates to: HPSTRCSSVPNT*PLTFSSGQKPQ Trigger: CTGTGGTTTCTGTCCTGAGCTGAAGGTTAACGGGCAAGTGTTAGGCACAGAAGAGCATCGTGTGCTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | ACAGAGGCAAGTGGATCTCTGAGTTTGAGGCTAGCCTaGTCTACAGAGCAAGTTCTAGGACAGCCAGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TEASGSLSLRLA*STEQVLGQPGP Trigger: TGGCCCTGGCTGTCCTAGAACTTGCTCTGTAGACCAGGCTAGCCTCAAACTCAGAGATCCACTTGCCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATCTAAGGATAAGCGGCACACAGTAAGCTCTTCAGTTTACTCTATGTTTCCCCAAGCGGGTGTGGGATaGGGGCAGCTGGGCCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSKDKRHTVSSSVYSMFPQAGVG*GQLGHL Trigger: CAGATGGCCCAGCTGCCCCAATCCCACACCCGCTTG...GGGAAACATAGAGTAAACTGAAGAGCTTACTGTGTGCCGCTTATCCTTAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | CCTTTCTGGAGTGAAGTCAGGCAGGGTGTGTGTGTGTaGAGTCAGGCAGTGTGTGTGTGTGTGTGTGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PFWSEVRQGVCV*SQAVCVCVCEV Trigger: GACTTCACACACACACACACACACTGCCTGACTTCACACACACACACCCTGCCTGACTTCACTCCAGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | AGAACAAGCACTCTTCACTGCCTAGGTGACCTCAGCTaGGGCAGGGGGAAGACTGTATTACAAAGGCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RTSTLHCLGDLS*GRGKTVLQRHK Trigger: CTTGTGCCTTTGTAATACAGTCTTCCCCCTGCCGCAGCTGAGGTCACCTAGGCAGTGAAGAGTGCTTGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | AGTAGTCTATACACACACAGAACAAGCACTCTTCACTaGCTAGGTGACCTCAGCTGCGGCAGGGGGAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: SSLYTHRTSTLH*LGDLSCGRGKT Trigger: AGTCTTCCCCCTGCCGCAGCTGAGGTCACCTAGGCAGTGAAGAGTGCTTGTTCTGTGTGTGTATAGACTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | ACAAAGGCACAAGGGGATACTGTTAGGGTTTCGGAATaGGAGCCTACGCCCAAAGCATTCGGTGAAAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: TKAQGDTVRVSE*EPTPKAFGERR Trigger: CCGTCTTTCACCGAATGCTTTGGGCGTAGGCTCCCATTCCGAAACCCTAACAGTATCCCCTTGTGCCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | GTAGGGTCGCCAGAGGAGATACGTCACATTCACCCTTaGATACAGCACAGGGTTCACAGGCCATTCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VGSPEEIRHIHP*IQHRVHRPFRE Trigger: TTCTCTGAATGGCCTGTGAACCCTGTGCTGTATCCAAGGGTGAATGTGACGTATCTCCTCTGGCGACCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGGGATACTGTTAGGGTTTCGGAATGGGAGCCTACGCCCAAAGCATTCGGTGAAATGGCAGCACAATaGGTCAGCAGCTTCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QGDTVRVSEWEPTPKAFGEMAAQ*VSSFSS Trigger: AGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTC...ACCGAATGCTTTGGGCGTAGGCTCCCATTCCGAAACCCTAACAGTATCCCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGGTAAGCGTGCAAGCGGGTGTGGGATTGGGGCAGCTGGGCCATCTGTCGTTAGCATCTAAACCTTTATaGTTTACTGCTAGCAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TVSVQAGVGLGQLGHLSLASKPL*FTASKS Trigger: GCTTTTGCTAGCAGTAAACAATAAAGGTTTAGATGC...TAACGACAGATGGCCCAGCTGCCCCAATCCCACACCCGCTTGCACGCTTACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | TTCATTCTGTGCCCAGCACCAGGTATTATCTCTTGTTaGCTATGGCTAGCCAAAGGCAAAGTGGGGGCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FILCPAPGIISC*LWLAKGKVGAV Trigger: CACCGCCCCCACTTTGCCTTTGGCTAGCCATAGTCAACAAGAGATAATACCTGGTGCTGGGCACAGAATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | CTAGGCAGTGATTTCCCACAGTGCTTTTTGACCCGCTaGACCCAAAGCACCAAAACAGAGCATCCTGTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LGSDFPQCFLTR*TQSTKTEHPVA Trigger: TGCTACAGGATGCTCTGTTTTGGTGCTTTGGGTTCAGCGGGTCAAAAAGCACTGTGGGAAATCACTGCCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | AACAAAGCCGAAACTGAGTTAGAGATGTTTGAGATATaGAATCCTACCTTGCAGAGGCGGGAGGCTGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NKAETELEMFEI*NPTLQRREAVG Trigger: GCCCACAGCCTCCCGCCTCTGCAAGGTAGGATTGCATATCTCAAACATCTCTAACTCAGTTTCGGCTTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | ATCACATGCTTGATGCCTAACTTTCAGCCAAGGAGATaGGAAGCACCAAAGGGACAGGTCAGGGTAGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ITCLMPNFQPRR*EAPKGQVRVVV Trigger: TACCACTACCCTGACCTGTCCCTTTGGTGCTTCCCATCTCCTTGGCTGAAAGTTAGGCATCAAGCATGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | TTCTCAATGCTTGAGCACCTGGTCTGTGTAAATGACTaGAACCTCCCTGCCAGCCTTTCTGGAGTGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FSMLEHLVCVND*NLPASLSGVKS Trigger: TGACTTCACTCCAGAAAGGCTGGCAGGGAGGTTTCAGTCATTTACACAGACCAGGTGCTCAAGCATTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | ACGTACAGGAGAAATATGCTTGAGGGCTTTTCTGACTaGCATCATGGGTTCATTCTGTGCCCAGCACCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TYRRNMLEGFSD*HHGFILCPAPG Trigger: ACCTGGTGCTGGGCACAGAATGAACCCATGATGTCAGTCAGAAAAGCCCTCAAGCATATTTCTCCTGTACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | ACCCAAAGCACCAAAACAGAGCATCCTGTAGCAGTGTaGGCAAACGGAATGAGAGCAATTATGCACCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TQSTKTEHPVAV*ANGMRAIMHPE Trigger: CTCTGGGTGCATAATTGCTCTCATTCCGTTTGCTCACACTGCTACAGGATGCTCTGTTTTGGTGCTTTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | CCAAGGACGGGAGCAAAGGCCTTCAGCTCAGGGCTTTaGAGAGCAACCTTAGAGATATCCTTTTATGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PRTGAKAFSSGL*RATLEISFYAF Trigger: GAAAGCATAAAAGGATATCTCTAAGGTTGCTCTTCAAAGCCCTGAGCTGAAGGCCTTTGCTCCCGTCCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | TGCAGATACAGTGTGGGGATGCTAGACTCTTGGGGCTaGCTTACACAACCTAGATTAGCATCTAATGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CRYSVGMLDSWG*LTQPRLASNGC Trigger: ACACCCATTAGATGCTAATCTAGGTTGTGTAAGCCAGCCCCAAGAGTCTAGCATCCCCACACTGTATCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGGGACACATTAAGTTCAGCTTTCCAAAGAGTAAATAGAAGATGTATGCCTCTGGCAGCCAGAAGGTaGGCAGCCAGCAATCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: AWDTLSSAFQRVNRRCMPLAARR*AASNLQ Trigger: TTGAAGATTGCTGGCTGCCAACCTTCTGGCTGCCAG...AGGCATACATCTTCTATTTACTCTTTGGAAAGCTGAACTTAATGTGTCCCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | ACTGCTAGCAAAAGCTTTTGGACAGGAAGGCAACTCTaGGGACTTAGGTCCAACCTTCCTAACAAGACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TASKSFWTGRQL*GLRSNLPNKTP Trigger: TGGAGTCTTGTTAGGAAGGTTGGACCTAAGTCCTCAGAGTTGCCTTCCTGTCCAAAAGCTTTTGCTAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | CCGCCTCTAGTCAGAGCAGGAAGTGATTCCCTAAGGTaGCAAGGTATCAAGGTATCAAGAGACGTGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPLVRAGSDSLR*QGIKVSRDVKK Trigger: TTTCTTCACGTCTCTTGATACCTTGATACCTTGTCACCTTAGGGAATCACTTCCTGCTCTGACTAGAGGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | CTAGATGGTATTCCCGCCTCTAGTCAGAGCAGGAAGTaGTTCCCTAAGGTGACAAGGTATCAAGGTATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LDGIPASSQSRK*FPKVTRYQGIK Trigger: CTTGATACCTTGATACCTTGTCACCTTAGGGAATCACTTCCTGCTCTGACTAGAGGCGGGAATACCATCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | CTTTCTCAAGCAAGTTGGCTAGCACCCATTGCAGGGTaGACGGCACAGCTTTCTATTCAAAGGAAAGTATTG | + |
|
Preference number: 3 (lower is better) Translates to: LSQASWLAPIAG*TAQLSIQRKVL Trigger: CAATACTTTCCTTTGAATAGAAAGCTGTGCCGTCCACCCTGCAATGGGTGCTAGCCAACTTGCTTGAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | GAGTTTTCTCTGAAAGCGCCACCTTGTGAAACACATTaGGATAGAGGAATAAACCCCACACTGACCTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: EFSLKAPPCETH*DRGINPTLTLG Trigger: CCCTAAGGTCAGTGTGGGGTTTATTCCTCTATCCCAATGTGTTTCACAAGGTGGCGCTTTCAGAGAAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCCCAAAGAAACAATTAAGTACATACTGTACTATATATAGGGCCTGGGACCTGGCAGCCAGAAGGTaGGCAGCCAGCAATCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSPKKQLSTYCTIYRAWDLAARR*AASNLQ Trigger: TTGAAGATTGCTGGCTGCCAACCTTCTGGCTGCCAG...GTCCCAGGCCCTATATATAGTACAGTATGTACTTAATTGTTTCTTTGGGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGAACAGTAAGGTACAGTaGTTTATAATGCCCAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: IDQYFHQLQGREQRPSAQNSKVQ*FIMPRV Trigger: TACCCTGGGCATTATAAACAACTGTACCTTACTGTT...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCATCACTGCTTGGCTATGTGTCCCCTGAAAAACCAAAGCCCTACACTCAACTCTGTATTTTGGACCTaGTTCAATGACAAGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DHHCLAMCPLKNQSPTLNSVFWT*FNDKAE Trigger: TTCTGCCTTGTCATTGAACAAGGTCCAAAATACAGA...GTTGAGTGTAGGGCTTTGGTTTTTCAGGGGACACATAGCCAAGCAGTGATGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | CCTAGCAAAAATGTCTGTATTTTGGACCTTGTTCAATaGCAAGGCAGAACTCGCTGTCCAAGTGAGACCTCG | + |
|
Preference number: 3 (lower is better) Translates to: PSKNVCILDLVQ*QGRTRCPSETS Trigger: CGAGGTCTCACTTGGACAGCGAGTTCTGCCTTGTCATTGAACAAGGTCCAAAATACAGACATTTTTGCTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | CGGCACAGCTTTCTATTCAAAGGAAAGTATTGTCTTTaGGATAGCAGCACCCTGTGCAACTTGGGGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RHSFLFKGKYCL*DSSTLCNLGSS Trigger: TGAAGACCCCAAGTTGCACAGGGTGCTGCTATCTCAAAGACAATACTTTCCTTTGAATAGAAAGCTGTGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | CACCCAGAGGGAACGTGTACCCTGATGTCTGCACCGTaGAATCAAAATGGCAGAACGAATTTCAAGTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: HPEGTCTLMSAP*NQNGRTNFKYE Trigger: TTCATACTTGAAATTCGTTCTGCCATTTTGATTTCACGGTGCAGACATCAGGGTACACGTTCCCTCTGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | ATTGCTAGGATGGACTGCTTCTGTATACAGAATGTATaGCTGGAATCTGAAAACACGGGCAGGAAGCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: IARMDCFCIQNV*LESENTGRKPQ Trigger: TTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAGGCATACATTCTGTATACAGAAGCAGTCCATCCTAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | CACACAGTAAGCTCTTCAGTTTACTCTATGTTTCCCTaGGCTACTAAAGACCCCAATGGCAAGTCTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HTVSSSVYSMFP*ATKDPNGKSPC Trigger: ACAAGGAGACTTGCCATTGGGGTCTTTAGTAGCCCAGGGAAACATAGAGTAAACTGAAGAGCTTACTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | CAGGCATACTTGGTGCTGAAAGTATTTCTCATCACATaGTTGATGCCTAACTTTCAGCCAAGGAGATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QAYLVLKVFLIT*LMPNFQPRRWE Trigger: TTCCCATCTCCTTGGCTGAAAGTTAGGCATCAAGCATGTGATGAGAAATACTTTCAGCACCAAGTATGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | TTTTTAACCTGGGACTATAGCCAACAGCGAACGCTCTaGATAATGACTGGGTTTAAAGATCAGGACGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: FLTWDYSQQRTL*IMTGFKDQDVQ Trigger: CTGTACGTCCTGATCTTTAAACCCAGTCATTATGCAGAGCGTTCGCTGTTGGCTATAGTCCCAGGTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | AGTATTGTCTTTGAGATAGCAGCACCCTGTGCAACTTaGGGTCTTCATTTTTACTTAGCACGACCATGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SIVFEIAAPCAT*GLHFYLARPCG Trigger: TCCACATGGTCGTGCTAAGTAAAAATGAAGACCCCAAGTTGCACAGGGTGCTGCTATCTCAAAGACAATACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | AACCATCCAGAGACTGAAGGTCAAACTCAGAGATGCTaGCGACCACAGGAATATTGCTGGCTAATATATGTT | + |
|
Preference number: 3 (lower is better) Translates to: NHPETEGQTQRC*RPQEYCWLIYV Trigger: AACATATATTAGCCAGCAATATTCCTGTGGTCGCCAGCATCTCTGAGTTTGACCTTCAGTCTCTGGATGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAACCCAACTCCAAACTACCTTCCATCCCCACCATTTGAACTTGGAATTGCTGCATCTAAACCTTTATaGTTTACTGCTAGCAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PNPTPNYLPSPPFELGIAASKPL*FTASKS Trigger: GCTTTTGCTAGCAGTAAACAATAAAGGTTTAGATGC...AGCAATTCCAAGTTCAAATGGTGGGGATGGAAGGTAGTTTGGAGTTGGGTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | AGTCCTGTAAATGGTAGAGTCTCTGGAACCAAACCTTaGACAGAAGCTATTCGGTATATTCTTGCCCTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SPVNGRVSGTKP*TEAIRYILALV Trigger: GACTAGGGCAAGAATATACCGAATAGCTTCTGTTCAAGGTTTGGTTCCAGAGACTCTACCATTTACAGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | TACTTAGCACGACCATGTGGAGGTCCTATTTTTAAGTaGGCTTCTGAGCTGAGTTTAGTAAATCACTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YLARPCGGPIFK*ASELSLVNHLG Trigger: CCCCAAGTGATTTACTAAACTCAGCTCAGAAGCTCACTTAAAAATAGGACCTCCACATGGTCGTGCTAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | CAACCCAACTCCAAACTACCTTCCATCCCCACCATTTaGACTTGGAATTGCTGCAACAGTATTTTGGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: QPNSKLPSIPTI*TWNCCNSILVD Trigger: ATCTACCAAAATACTGTTGCAGCAATTCCAAGTTCAAATGGTGGGGATGGAAGGTAGTTTGGAGTTGGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | AACCAAACCTTGAACAGAAGCTATTCGGTATATTCTTaGCCTAGTCTCACTAAAAGCTGCTTCAGTGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: NQTLNRSYSVYS*PSLTKSCFSGT Trigger: GGTTCCACTGAAGCAGCTTTTAGTGAGACTAGGGCAAGAATATACCGAATAGCTTCTGTTCAAGGTTTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | AAGCAAGCATGTATTCTTCCAATGGCTATCCATATGTaGTTACACAAGTGTCACACTGGGATGGGGATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KQACILPMAIHM*LHKCHTGMGIF Trigger: GAAAATCCCCATCCCAGTGTGACACTTGTGTAAGCACATATGGATAGCCATTGGAAGAATACATGCTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | TTTAACCATCCAGAGACTGAAGGTCAAACTCAGAGATaGTGGCGACCACAGGAATATTGCTGGCTAATATAT | + |
|
Preference number: 3 (lower is better) Translates to: FNHPETEGQTQR*WRPQEYCWLIY Trigger: ATATATTAGCCAGCAATATTCCTGTGGTCGCCAGCATCTCTGAGTTTGACCTTCAGTCTCTGGATGGTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | TCCAGTATTTGTCGAGCACTGTGGTTCTTTAGAAAATaGTCTGCATACTCAGTTACAGATGCAGTGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSICRALWFFRK*SAYSVTDAVLP Trigger: AGGAAGCACTGCATCTGTAACTGAGTATGCAGACCATTTTCTAAAGAACCACAGTGCTCGACAAATACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | GTACAAACGAACATAAAGCTGCAATCACCCTTGCATTaGTCTCTGAACAGTAAACTAGGTGGTTTCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VQTNIKLQSPLH*SLNSKLGGFLG Trigger: ACCAAGGAAACCACCTAGTTTACTGTTCAGAGATCAATGCAAGGGTGATTGCAGCTTTATGTTCGTTTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | GGACAGAAGATTGAAACAACTGTGATGTTTGAAAGTTaGCATGATTTAACTCCCACAGTGACGATGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GQKIETTVMFES*HDLTPTVTMAV Trigger: CACAGCCATCGTCACTGTGGGAGTTAAATCATGTCAACTTTCAAACATCACAGTTGTTTCAATCTTCTGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | AGTACAAATGGTAAGGCAAATGCACAAACCATTCTCTaGTTTGCTTTCAACCAATTCGGCTGGCATACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: STNGKANAQTIL*FAFNQFGWHTS Trigger: ACTTGTATGCCAGCCGAATTGGTTGAAAGCAAACCAGAGAATGGTTTGTGCATTTGCCTTACCATTTGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATAAGTCAAACAAAAAGCAGCTTACTGTGGTCTACAGCTTTGCTGAAGCCTGCTTCCTTTGTTCACTaGAGTTTAGAAATGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RISQTKSSLLWSTALLKPASFVH*SLEMTV Trigger: CACTGTCATTTCTAAACTCAAGTGAACAAAGGAAGC...AGGCTTCAGCAAAGCTGTAGACCACAGTAAGCTGCTTTTTGTTTGACTTATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | AAATCTCTGCCAGAAGCAATAGCTACAGAGTTCTGCTaGTTTGCCTCTTTTAATGTAAAAAGACACCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KSLPEAIATEFC*FASFNVKRHLD Trigger: GTCTAGGTGTCTTTTTACATTAAAAGAGGCAAAGCAGCAGAACTCTGTAGCTATTGCTTCTGGCAGAGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | AATGGCTATCCATATGTGCTTACACAAGTGTCACACTaGGATGGGGATTTTCAATGTTATTCTTTCCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: NGYPYVLTQVSH*DGDFQCYSFLD Trigger: GTCTAGGAAAGAATAACATTGAAAATCCCCATCCCAGTGTGACACTTGTGTAAGCACATATGGATAGCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | TTTGCTGAAGCCTCTAGAAGCTTTAACAAGTCCCTGTaGGAATACAGAAACAATACACACTTTACAGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FAEASRSFNKSL*EYRNNTHFTVK Trigger: CTTCACTGTAAAGTGTGTATTGTTTCTGTATTCCCACAGGGACTTGTTAAAGCTTCTAGAGGCTTCAGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATAAGTCAAACAAAAAGCAGCTTACTGTGGTCTACAGCTTTGCTGAAGCCTCATTTGAACTTGGAATaGCTGCAACAGTATTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RISQTKSSLLWSTALLKPHLNLE*LQQYFG Trigger: ACCAAAATACTGTTGCAGCAATTCCAAGTTCAAATG...AGGCTTCAGCAAAGCTGTAGACCACAGTAAGCTGCTTTTTGTTTGACTTATTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | ACTGACAACATACACTTAAAGATAGGAAACACCAAGTaGCAGTCGGTAGTAGTCTATACACACACAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: TDNIHLKIGNTK*QSVVVYTHTEQ Trigger: TTGTTCTGTGTGTGTATAGACTACTACCGACTGTCACTTGGTGTTTCCTATCTTTAAGTGTATGTTGTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | AACAAATCTCTGCCAGAAGCAATAGCTACAGAGTTCTaGTGCTTTGCCTCTTTTAATGTAAAAAGACACCTA | + |
|
Preference number: 3 (lower is better) Translates to: NKSLPEAIATEF*CFASFNVKRHL Trigger: TAGGTGTCTTTTTACATTAAAAGAGGCAAAGCAGCAGAACTCTGTAGCTATTGCTTCTGGCAGAGATTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | AAACATACCAGTTCTTCCAGTATTTGTCGAGCACTGTaGTTCTTTAGAAAATGGTCTGCATACTCAGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: KHTSSSSICRAL*FFRKWSAYSVT Trigger: TGTAACTGAGTATGCAGACCATTTTCTAAAGAACCACAGTGCTCGACAAATACTGGAAGAACTGGTATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CCA 72 bp | AGTCTAAGAATAAGTCAAACAAAAAGCAGCTTACTGTaGTCTACAGCTTTGCTGAAGCCTCTAGAAGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SLRISQTKSSLL*STALLKPLEAL Trigger: TAAAGCTTCTAGAGGCTTCAGCAAAGCTGTAGACCACAGTAAGCTGCTTTTTGTTTGACTTATTCTTAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR TCA 72 bp | AAAGTAGAAAGTAACGAACTCCATGCGTTTGCCAATTaGAGTAGAAGAGCTTTTCAAACTGAGACAGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KVESNELHAFAN*SRRAFQTETVS Trigger: TGAAACTGTCTCAGTTTGAAAAGCTCTTCTACTTCAATTGGCAAACGCATGGAGTTCGTTACTTTCTACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | TTAGAAAATGGTCTGCATACTCAGTTACAGATGCAGTaGTTCCTTTGTTCACTTGAGTTTAGAAATGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: LENGLHTQLQMQ*FLCSLEFRNDS Trigger: ACTGTCATTTCTAAACTCAAGTGAACAAAGGAAGCACTGCATCTGTAACTGAGTATGCAGACCATTTTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR GCA 72 bp | CATCAAAAATGTCTCTTAAGTAAAGGCCTTCTTTATTaGTTAAACATCACTCTCAAGCCTAACTTAGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: HQKCLLSKGLLY*LNITLKPNLVT Trigger: AGTGACTAAGTTAGGCTTGAGAGTGATGTTTAAGCAATAAAGAAGGCCTTTACTTAAGAGACATTTTTGATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | ACGGTAAGCGTGCAAGCGGGTGTGGGATTGGGGCAGCTGGGCCATCTGTCGTTACCGCCACCTCGCGGATaGTGGAGAGCGGCATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSVQAGVGLGQLGHLSLPPPRG*WRAACP Trigger: AGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGG...TAACGACAGATGGCCCAGCTGCCCCAATCCCACACCCGCTTGCACGCTTACCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | GTGCAGCAGGTCACTGGTCCTCCCACAATATCCTGCTaGGCCTGGCTCCGCTGCCCCGCCCCCTGTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQQVTGPPTISC*AWLRCPAPCHS Trigger: TGAATGACAGGGGGCGGGGCAGCGGAGCCAGGCCAAGCAGGATATTGTGGGAGGACCAGTGACCTGCTGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | AATGGGAGCCTACGCCCAAAGCATTCGGTGAAAGACGGTAAGCGTGCAAGCGGGCCCTCCTCACTGGTCTaGACTCGCACGCGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGSLRPKHSVKDGKRASGPSSLV*TRTRFR Trigger: TCTGAAGCGCGTGCGAGTGCAGACCAGTGAGGAGGG...CCCGCTTGCACGCTTACCGTCTTTCACCGAATGCTTTGGGCGTAGGCTCCCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGGCGGATTACATCATAACTCAGCTGGGCCTGGATTCCCACCCTACACTGGCATGCCCTCCTCACTaGTCTGCACTCGCACGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQADYIITQLGLDSHPTLACPPH*SALARA Trigger: AGCGCGTGCGAGTGCAGACCAGTGAGGAGGGCATGC...CAGTGTAGGGTGGGAATCCAGGCCCAGCTGAGTTATGATGTAATCCGCCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCAGCTGGGCCTGGATCTGGAGCAGGACTTCTaGGGCTCGGTACCACAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KQAQQLQADYIITQLGLDLEQDF*GSVPQR Trigger: ACGCTGTGGTACCGAGCCCCAGAAGTCCTGCTCCAG...ATCCAGGCCCAGCTGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGCCTACGCCCAAAGCATTCGGTGAAAGACGGTAAGCGTGCAAGCGGGTGTTGTTCAGCTCCGAGGTaGTCTGGTTGGATGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLRPKHSVKDGKRASGCCSAPR*SGWMAG Trigger: ACCTGCCATCCAACCAGAGCACCTCGGAGCTGAACA...ACACCCGCTTGCACGCTTACCGTCTTTCACCGAATGCTTTGGGCGTAGGCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGGCGGATTACATCATAACTCAGCTGGGCCTGGATTCCCACCCTACACTGCTGGAGCAGGACTTCTaGGGCTCGGTACCACAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LQADYIITQLGLDSHPTLLEQDF*GSVPQR Trigger: ACGCTGTGGTACCGAGCCCCAGAAGTCCTGCTCCAG...CAGTGTAGGGTGGGAATCCAGGCCCAGCTGAGTTATGATGTAATCCGCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | AGTACCAAAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCAGCTGGGAGAGGTCCACAGGGGTaGCATAGCTGGACTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STKAGPAAAGGLHHNSAGRGPQG*HSWTGA Trigger: TGCTCCAGTCCAGCTATGCCACCCCTGTGGACCTCT...CCCAGCTGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTTTGGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | GCAGCACCTAGACGCCTGCTCTGCCTAGAATCCACTTaGCTGGCCACCTGGCACAGTCCCTTATTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAPRRLLCLEST*LATWHSPLLKA Trigger: TGCCTTCAATAAGGGACTGTGCCAGGTGGCCAGCAAAGTGGATTCTAGGCAGAGCAGGCGTCTAGGTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGTCAGGTCGCGGGCCTTaGACACCTTCCCATAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IDQYFHQLQGREQRPSAQSGRGP*TPSHRR Trigger: GCGCCTATGGGAAGGTGTTCAAGGCCCGCGACCTGA...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAAGTACCAAAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCACTGACCACGTTGGGGTaGTCGAAGGTCTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTSTKAGPAAAGGLHHNSLTTLG*SKVSRC Trigger: GCACCTGGAGACCTTCGAGCACCCCAACGTGGTCAG...TGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTTTGGTACTTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | AGTACCAAAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCAGCTGGGTGTTCAGCTCCGAGGTaGTCTGGTTGGATGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: STKAGPAAAGGLHHNSAGCSAPR*SGWMAG Trigger: ACCTGCCATCCAACCAGAGCACCTCGGAGCTGAACA...CCCAGCTGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTTTGGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | GTTGGCAGCCAGCAATCTTCAACTGCTCTGAGAGGCTaGCTTAGGGGACTCGCAGCCGCCAATGTGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGSQQSSTALRG*LRGLAAANVFR Trigger: TCTGAACACATTGGCGGCTGCGAGTCCCCTAAGCAAGCCTCTCAGAGCAGTTGAAGATTGCTGGCTGCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | AGTACCAAAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCAGCTGGGACACATCAAACAACCTaGCCACGTTGGGGTGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: STKAGPAAAGGLHHNSAGTHQTT*PRWGAR Trigger: TCGAGCACCCCAACGTGGTCAGGTTGTTTGATGTGT...CCCAGCTGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTTTGGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CCCAACCCAACTCCAAACTACCTTCCATCCCCACCATTTGAACTTGGAATTGCTGCATGCCCTCCTCACTaGTCTGCACTCGCACGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNPTPNYLPSPPFELGIAACPPH*SALARA Trigger: AGCGCGTGCGAGTGCAGACCAGTGAGGAGGGCATGC...AGCAATTCCAAGTTCAAATGGTGGGGATGGAAGGTAGTTTGGAGTTGGGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | GGACAGAAACCACAGCAGGGCAACTGCCTTTTGAGTTGTTGGGGATTCCTAGGTAGAGGTCCACAGGGGTaGCATAGCTGGACTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQKPQQGNCLLSCWGFLGRGPQG*HSWTGA Trigger: TGCTCCAGTCCAGCTATGCCACCCCTGTGGACCTCT...ACCTAGGAATCCCCAACAACTCAAAAGGCAGTTGCCCTGCTGTGGTTTCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | CCCAACCCAACTCCAAACTACCTTCCATCCCCACCATTTGAACTTGGAATTGCTACGCACTCATACTGCTaGTCGGCGCGACTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNPTPNYLPSPPFELGIATHSYC*SARLRL Trigger: CAGCCTGAGTCGCGCCGATCAGCAGTATGAGTGCGT...AGCAATTCCAAGTTCAAATGGTGGGGATGGAAGGTAGTTTGGAGTTGGGTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | ACGGTAAGCGTGCAAGCGGGTGTGGGATTGGGGCAGCTGGGCCATCTGTCGTTAAAGATTTTTCCTAGTTaGTCCACGTCTGAACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVSVQAGVGLGQLGHLSLKIFPS*STSELP Trigger: TGGAAGTTCAGACGTGGATCAACTAGGAAAAATCTT...TAACGACAGATGGCCCAGCTGCCCCAATCCCACACCCGCTTGCACGCTTACCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | TCCCACCCTACACTGGCAGCATTCAAGGTTAGAAAACGAAATGGCAGCACAATTTGGTGGAGAGCGGCATaGCCTCCTCACTGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHPTLAAFKVRKRNGSTIWWRAA*PPHWSA Trigger: TGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCA...AATTGTGCTGCCATTTCGTTTTCTAACCTTGAATGCTGCCAGTGTAGGGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | CTACACTGGCAGCATTCAAGGTTAGAAAACGAAATGGCAGCACAATTGGTCAGCTGGTGGAGAGCGGCATaGCCTCCTCACTGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHWQHSRLENEMAAQLVSWWRAA*PPHWSA Trigger: TGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCA...GCTGACCAATTGTGCTGCCATTTCGTTTTCTAACCTTGAATGCTGCCAGTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CAAGACTCCATTGTGAATCACCTTTCACTGAACAAGCCCTTCTTACTATCAGTCCCACCTCGCGGATGGTaGAGAGCGGCATGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QDSIVNHLSLNKPFLLSVPPRGW*RAACPP Trigger: AGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGG...GACTGATAGTAAGAAGGGCTTGTTCAGTGAAAGGTGATTCACAATGGAGTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CTCACAAGTACCAAAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCACCTTTATGGTTTCTGTaGGTACGCCGGGCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTSTKAGPAAAGGLHHNSPLWFL*VRRALE Trigger: TTCCAGAGCCCGGCGTACCCACAGAAACCATAAAGG...TGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTTTGGTACTTGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTTAGAAAACGAAATGGCAGCACAATTGGTCAGCAGCTTCTCTTCTTCTGGACGCACTCATACTGCTaGTCGGCGCGACTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVRKRNGSTIGQQLLFFWTHSYC*SARLRL Trigger: CAGCCTGAGTCGCGCCGATCAGCAGTATGAGTGCGT...CCAGAAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTCGTTTTCTAACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | AGTACCAAAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCAGCTGGGGCTTTATCTGTCCACTaGTGGTCACCAGAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STKAGPAAAGGLHHNSAGALSVH*WSPECS Trigger: AGAACATTCTGGTGACCAGCAGTGGACAGATAAAGC...CCCAGCTGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTTTGGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGACACATTAAGTTCAGCTTTCCAAAGAGTAAATAGAAGATGTATGCCTCCACCTCGCGGATGGTaGAGAGCGGCATGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AWDTLSSAFQRVNRRCMPPPRGW*RAACPP Trigger: AGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGG...AGGCATACATCTTCTATTTACTCTTTGGAAAGCTGAACTTAATGTGTCCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | AGTACCAAAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCAGCTGGGACATCATATCCTTTATaGTTTCTGTGGGTACGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: STKAGPAAAGGLHHNSAGTSYPL*FLWVRR Trigger: CCGGCGTACCCACAGAAACCATAAAGGATATGATGT...CCCAGCTGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTTTGGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | GAGACCACTATCACTAATCATTCCAGGACTCACACCTaGCACCAGGCAGCTTCCCCACTGTGGCAGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ETTITNHSRTHT*HQAASPLWQMN Trigger: ATTCATCTGCCACAGTGGGGAAGCTGCCTGGTGCAAGGTGTGAGTCCTGGAATGATTAGTGATAGTGGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | GTTCATTCTGTGCCCAGCACCAGGTATTATCTCTTGTaGACTATGGCTAGCCAAAGGCAAAGTGGGGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VHSVPSTRYYLL*TMASQRQSGGG Trigger: ACCGCCCCCACTTTGCCTTTGGCTAGCCATAGTCAACAAGAGATAATACCTGGTGCTGGGCACAGAATGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | TGGGTTCATTCTGTGCCCAGCACCAGGTATTATCTCTaGTTGACTATGGCTAGCCAAAGGCAAAGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WVHSVPSTRYYL*LTMASQRQSGG Trigger: GCCCCCACTTTGCCTTTGGCTAGCCATAGTCAACAAGAGATAATACCTGGTGCTGGGCACAGAATGAACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGTTCTCTGTCCGTCCGTaGCACTGTGCACACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IDQYFHQLQGREQRPSAQFSVRP*HCAHIK Trigger: TTTGATGTGTGCACAGTGTCACGGACGGACAGAGAA...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTGGTAAGGCAGAGCCCACCCAGAAGCTGGCAGCCAGAAGGTTGGCAGCCACTTTATCCAAGTAAGTaGTCAAGTCTTGATCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLVRQSPPRSWQPEGWQPLYPSK*SSLDQH Trigger: ATGTTGATCAAGACTTGACCACTTACTTGGATAAAG...TGGCTGCCAACCTTCTGGCTGCCAGCTTCTGGGTGGGCTCTGCCTTACCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGGGGTACGCCGGGCTCTaGAACTTTATCCAAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IDQYFHQLQGREQRPSAQGYAGL*NFIQVS Trigger: ACTTACTTGGATAAAGTTCCAGAGCCCGGCGTACCC...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGTGGGTTGAGCAGATTTaGAATGAAAAGCCTGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IDQYFHQLQGREQRPSAQWVEQI*NEKPAG Trigger: CCCGGCAGGCTTTTCATTCCAAATCTGCTCAACCCA...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCCAAAGAAACAATTAAGTACATACTGTACTATATATAGGGCCTGGGACTCAGGTCGCGGGCCTTaGACACCTTCCCATAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPKKQLSTYCTIYRAWDSGRGP*TPSHRR Trigger: GCGCCTATGGGAAGGTGTTCAAGGCCCGCGACCTGA...GTCCCAGGCCCTATATATAGTACAGTATGTACTTAATTGTTTCTTTGGGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | AATGGGAGCCTACGCCCAAAGCATTCGGTGAAAGACGGTAAGCGTGCAAGCGGGGAAAAAGAGGCTTTCTaGGAAACATTTCTGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGSLRPKHSVKDGKRASGEKEAF*ETFLQR Trigger: TCTTTGCAGAAATGTTTCGCAGAAAGCCTCTTTTTC...CCCGCTTGCACGCTTACCGTCTTTCACCGAATGCTTTGGGCGTAGGCTCCCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCCAGGCAGTGGCAGGAAAATGAATTAGAAGTGCTGGTGGTTGAGAGCTTCGGGTACGCCGGGCTCTaGAACTTTATCCAAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LARQWQENELEVLVVESFGYAGL*NFIQVS Trigger: ACTTACTTGGATAAAGTTCCAGAGCCCGGCGTACCC...GAAGCTCTCAACCACCAGCACTTCTAATTCATTTTCCTGCCACTGCCTGGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CTACACTGGCAGCATTCAAGGTTAGAAAACGAAATGGCAGCACAATTGGTCAGCCCTTTATGGTTTCTGTaGGTACGCCGGGCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHWQHSRLENEMAAQLVSPLWFL*VRRALE Trigger: TTCCAGAGCCCGGCGTACCCACAGAAACCATAAAGG...GCTGACCAATTGTGCTGCCATTTCGTTTTCTAACCTTGAATGCTGCCAGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAATCTGAAAACACGGGCAGGAAGCCTCAAGGCATACGCTACCAGTTCTGTACATCATATCCTTTATaGTTTCTGTGGGTACGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LESENTGRKPQGIRYQFCTSYPL*FLWVRR Trigger: CCGGCGTACCCACAGAAACCATAAAGGATATGATGT...ACAGAACTGGTAGCGTATGCCTTGAGGCTTCCTGCCCGTGTTTTCAGATTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | GAATCCACTTTGCTGGCCACCTGGCACAGTCCCTTATaGAAGGCAACCTCTACATGCTACCTTAACATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESTLLATWHSPL*KATSTCYLNIC Trigger: GCAAATGTTAAGGTAGCATGTAGAGGTTGCCTTCAATAAGGGACTGTGCCAGGTGGCCAGCAAAGTGGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | AGCTCAGGACAGAAACCACAGCAGGGCAACTGCCTTTaGAGTTGTTGGGGATTCCTAGGTTTTATTGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGQKPQQGNCL*SCWGFLGFIAR Trigger: CCTAGCAATAAAACCTAGGAATCCCCAACAACTCAAAAGGCAGTTGCCCTGCTGTGGTTTCTGTCCTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCCAAAGAAACAATTAAGTACATACTGTACTATATATAGGGCCTGGGACCCCTCCTCACTGGTCTaGACTCGCACGCGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSPKKQLSTYCTIYRAWDPSSLV*TRTRFR Trigger: TCTGAAGCGCGTGCGAGTGCAGACCAGTGAGGAGGG...GTCCCAGGCCCTATATATAGTACAGTATGTACTTAATTGTTTCTTTGGGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGGCTTTATCTGTCCACTaGTGGTCACCAGAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IDQYFHQLQGREQRPSAQALSVH*WSPECS Trigger: AGAACATTCTGGTGACCAGCAGTGGACAGATAAAGC...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTTAGAAAACGAAATGGCAGCACAATTGGTCAGCAGCTTCTCTTCTTCTGGTTCTCTGTCCGTCCGTaGCACTGTGCACACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KVRKRNGSTIGQQLLFFWFSVRP*HCAHIK Trigger: TTTGATGTGTGCACAGTGTCACGGACGGACAGAGAA...CCAGAAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTCGTTTTCTAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | GGACAGAAACCACAGCAGGGCAACTGCCTTTTGAGTTGTTGGGGATTCCTAGGTAAGATTTTTCCTAGTTaGTCCACGTCTGAACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQKPQQGNCLLSCWGFLGKIFPS*STSELP Trigger: TGGAAGTTCAGACGTGGATCAACTAGGAAAAATCTT...ACCTAGGAATCCCCAACAACTCAAAAGGCAGTTGCCCTGCTGTGGTTTCTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAAGTACCAAAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCATCAGAAGTAGGTCTTTaGCTAGTTCGTCAATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSTKAGPAAAGGLHHNSSEVGL*LVRQYL Trigger: CAGATATTGACGAACTAGGCAAAGACCTACTTCTGA...TGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTTTGGTACTTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTTAGAAAACGAAATGGCAGCACAATTGGTCAGCAGCTTCTCTTCTTCTGGCCAGTCTTCCTCTCCTaGGAGTCCAATGATGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVRKRNGSTIGQQLLFFWPVFLS*ESNDVQ Trigger: TTGGACATCATTGGACTCCCAGGAGAGGAAGACTGG...CCAGAAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTCGTTTTCTAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | TCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGGGCTTaGAAGAGCAACCTTAGAGATATCCTTTTATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKDGSKGLQLRA*KSNLRDILLCF Trigger: AAAGCATAAAAGGATATCTCTAAGGTTGCTCTTCAAAGCCCTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCCAGGCAGTGGCAGGAAAATGAATTAGAAGTGCTGGTGGTTGAGAGCTTCTCTGCGAAACATTTCTaGAAAGATGCAACCGACACT | + |
|
Preference number: 4 (lower is better) Translates to: LARQWQENELEVLVVESFSAKHF*KDATDT Trigger: AGTGTCGGTTGCATCTTTGCAGAAATGTTTCGCAGA...GAAGCTCTCAACCACCAGCACTTCTAATTCATTTTCCTGCCACTGCCTGGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAAGTACCAAAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCAGAAAAAGAGGCTTTCTaGGAAACATTTCTGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTSTKAGPAAAGGLHHNSEKEAF*ETFLQR Trigger: TCTTTGCAGAAATGTTTCGCAGAAAGCCTCTTTTTC...TGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTTTGGTACTTGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | TTTCCCATTCTTGTAAGTGGGAAGGGCTTGGATAAATaGACCAGTATTTTCATCAGCTCCAAGGACGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPILVSGKGLDK*TSIFISSKDGS Trigger: GCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAATTTATCCAAGCCCTTCCCACTTACAAGAATGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | TCCCACCCTACACTGGCAGCATTCAAGGTTAGAAAACGAAATGGCAGCACAATTAGACCTCGGAGAAGCTaGAACATCATATCCTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: SHPTLAAFKVRKRNGSTIRPRRS*NIISFM Trigger: CATAAAGGATATGATGTTTCAGCTTCTCCGAGGTCT...AATTGTGCTGCCATTTCGTTTTCTAACCTTGAATGCTGCCAGTGTAGGGTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | GATAAATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGTCTGCGAAACATTTCTaGAAAGATGCAACCGACACT | + |
|
Preference number: 4 (lower is better) Translates to: DKLTSIFISSKDGSKGLQSAKHF*KDATDT Trigger: AGTGTCGGTTGCATCTTTGCAGAAATGTTTCGCAGA...CTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAATTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | GCAGATGAATGCACGGACACCTTCCTTAGGATGTACTaGGATGTAAGTATGCACAGGATAAGGGGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADECTDTFLRMY*DVSMHRIRGFC Trigger: ACAAAAACCCCTTATCCTGTGCATACTTACATCCAAGTACATCCTAAGGAAGGTGTCCGTGCATTCATCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | CCAACCCAACTCCAAACTACCTTCCATCCCCACCATTaGAACTTGGAATTGCTGCAACAGTATTTTGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTQLQTTFHPHH*NLELLQQYFGR Trigger: TCTACCAAAATACTGTTGCAGCAATTCCAAGTTCAAATGGTGGGGATGGAAGGTAGTTTGGAGTTGGGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | CAAATGGTAAGGCAAATGCACAAACCATTCTCTGGTTaGCTTTCAACCAATTCGGCTGGCATACAAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QMVRQMHKPFSG*LSTNSAGIQVR Trigger: CCTCACTTGTATGCCAGCCGAATTGGTTGAAAGCAAACCAGAGAATGGTTTGTGCATTTGCCTTACCATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCCAAAGAAACAATTAAGTACATACTGTACTATATATAGGGCCTGGGACCCAGTCTTCCTCTCCTaGGAGTCCAATGATGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPKKQLSTYCTIYRAWDPVFLS*ESNDVQ Trigger: TTGGACATCATTGGACTCCCAGGAGAGGAAGACTGG...GTCCCAGGCCCTATATATAGTACAGTATGTACTTAATTGTTTCTTTGGGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCCAAAGAAACAATTAAGTACATACTGTACTATATATAGGGCCTGGGACTGGGTTGAGCAGATTTaGAATGAAAAGCCTGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPKKQLSTYCTIYRAWDWVEQI*NEKPAG Trigger: CCCGGCAGGCTTTTCATTCCAAATCTGCTCAACCCA...GTCCCAGGCCCTATATATAGTACAGTATGTACTTAATTGTTTCTTTGGGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | AGTCAAACAAAAAGCAGCTTACTGTGGTCTACAGCTTaGCTGAAGCCTCTAGAAGCTTTAACAAGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQTKSSLLWSTA*LKPLEALTSPC Trigger: ACAGGGACTTGTTAAAGCTTCTAGAGGCTTCAGCAAAGCTGTAGACCACAGTAAGCTGCTTTTTGTTTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTTAGAAAACGAAATGGCAGCACAATTGGTCAGCAGCTTCTCTTCTTCTGGTCAGAAGTAGGTCTTTaGCTAGTTCGTCAATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVRKRNGSTIGQQLLFFWSEVGL*LVRQYL Trigger: CAGATATTGACGAACTAGGCAAAGACCTACTTCTGA...CCAGAAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTCGTTTTCTAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | ATCCCTTTATCATGGTTTTTGGATAAGGCTTATAAGTaGTCTATTCTCAGCTGCACGAGAGGCAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IPLSWFLDKAYK*SILSCTRGKGL Trigger: AAGGCCTTTGCCTCTCGTGCAGCTGAGAATAGACAACTTATAAGCCTTATCCAAAAACCATGATAAAGGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | AACCTCTACTTTCCCATTCTTGTAAGTGGGAAGGGCTaGGATAAATTGACCAGTATTTTCATCAGCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLYFPILVSGKG*DKLTSIFISSK Trigger: CTTGGAGCTGATGAAAATACTGGTCAATTTATCCAAGCCCTTCCCACTTACAAGAATGGGAAAGTAGAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGACACATTAAGTTCAGCTTTCCAAAGAGTAAATAGAAGATGTATGCCTAGACCTCGGAGAAGCTaGAACATCATATCCTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: AWDTLSSAFQRVNRRCMPRPRRS*NIISFM Trigger: CATAAAGGATATGATGTTTCAGCTTCTCCGAGGTCT...AGGCATACATCTTCTATTTACTCTTTGGAAAGCTGAACTTAATGTGTCCCAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CTACACTGGCAGCATTCAAGGTTAGAAAACGAAATGGCAGCACAATTGGTCAGCCTTTATCCAAGTAAGTaGTCAAGTCTTGATCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LHWQHSRLENEMAAQLVSLYPSK*SSLDQH Trigger: ATGTTGATCAAGACTTGACCACTTACTTGGATAAAG...GCTGACCAATTGTGCTGCCATTTCGTTTTCTAACCTTGAATGCTGCCAGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAAGCCTCTAGAAGCTTTAACAAGTCCCTGTGGGAATACAGAAACAATATCACAAACTTCTCGATaGGTTGAGCAGATTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKPLEALTSPCGNTETISQTSR*VEQIWN Trigger: ATTCCAAATCTGCTCAACCCATCGAGAAGTTTGTGA...TATTGTTTCTGTATTCCCACAGGGACTTGTTAAAGCTTCTAGAGGCTTCAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCCAAAGAAACAATTAAGTACATACTGTACTATATATAGGGCCTGGGACTCACAAACTTCTCGATaGGTTGAGCAGATTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPKKQLSTYCTIYRAWDSQTSR*VEQIWN Trigger: ATTCCAAATCTGCTCAACCCATCGAGAAGTTTGTGA...GTCCCAGGCCCTATATATAGTACAGTATGTACTTAATTGTTTCTTTGGGGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | ATACTCAGTTACAGATGCAGTGCTTCCTTTGTTCACTaGAGTTTAGAAATGACAGTGTCAAAAGGTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILSYRCSASFVH*SLEMTVSKGHG Trigger: TCCATGACCTTTTGACACTGTCATTTCTAAACTCAAGTGAACAAAGGAAGCACTGCATCTGTAACTGAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| 3UTR CAA 72 bp | TTTGTAAGGATGCACATGATCCCTTTATCATGGTTTTaGGATAAGGCTTATAAGTTGTCTATTCTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FVRMHMIPLSWF*DKAYKLSILSC Trigger: GCAGCTGAGAATAGACAACTTATAAGCCTTATCCAAAAACCATGATAAAGGGATCATGTGCATCCTTACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
||
| CDS CCA 90 bp | GCACCGCCACCTCGCGGATGGTGGAGAGCGGCATGCCCTCCTCACTaGTCTGCACTCGCACGCGCTTCAGAGCCACGAAGCGGCCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: APPPRGWWRAACPPH*SALARASEPRSGRR Trigger: ACGGCGGCCGCTTCGTGGCTCTGAAGCGCGTGCGAGTGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
||
| CDS GCA 90 bp | GCCACCTCGCGGATGGTGGAGAGCGGCATGCCCTCCTCACTGGTCTaGACTCGCACGCGCTTCAGAGCCACGAAGCGGCCGCCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATSRMVESGMPSSLV*TRTRFRATKRPPFF Trigger: GAAGAACGGCGGCCGCTTCGTGGCTCTGAAGCGCGTGCGAGTGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
||
| CDS GCA 90 bp | CCAGGTGCCTCAGCACCGCCACCTCGCGGATGGTGGAGAGCGGCATaGCCTCCTCACTGGTCTGCACTCGCACGCGCTTCAGAGCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: PGASAPPPRGWWRAA*PPHWSALARASEPR Trigger: TCGTGGCTCTGAAGCGCGTGCGAGTGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
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| CDS CCA 90 bp | GCTCGAAGGTCTCCAGGTGCCTCAGCACCGCCACCTCGCGGATGGTaGAGAGCGGCATGCCCTCCTCACTGGTCTGCACTCGCACGCGCT | + |
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Preference number: 5 (lower is better) Translates to: ARRSPGASAPPPRGW*RAACPPHWSALARA Trigger: AGCGCGTGCGAGTGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGACCTTCGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
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| CDS CCA 90 bp | GGTGCTCGAAGGTCTCCAGGTGCCTCAGCACCGCCACCTCGCGGATaGTGGAGAGCGGCATGCCCTCCTCACTGGTCTGCACTCGCACGC | + |
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Preference number: 5 (lower is better) Translates to: GARRSPGASAPPPRG*WRAACPPHWSALAR Trigger: GCGTGCGAGTGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGACCTTCGAGCACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
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| CDS TCA 90 bp | GCTTCAGAGCCACGAAGCGGCCGCCGTTCTTCAGGTCGCGGGCCTTaGACACCTTCCCATAGGCGCCTTCGCCGATCTCCGCCACGCACT | + |
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Preference number: 5 (lower is better) Translates to: ASEPRSGRRSSGRGP*TPSHRRLRRSPPRT Trigger: AGTGCGTGGCGGAGATCGGCGAAGGCGCCTATGGGAAGGTGTTCAAGGCCCGCGACCTGAAGAACGGCGGCCGCTTCGTGGCTCTGAAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
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| CDS GCA 90 bp | ACATCAAACAACCTGACCACGTTGGGGTGCTCGAAGGTCTCCAGGTaGCTCAGCACCGCCACCTCGCGGATGGTGGAGAGCGGCATGCCC | + |
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Preference number: 5 (lower is better) Translates to: TSNNLTTLGCSKVSR*LSTATSRMVESGMP Trigger: GGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGACCTTCGAGCACCCCAACGTGGTCAGGTTGTTTGATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
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| CDS-3UTR CAA 90 bp | AATGGGAGCCTACGCCCAAAGCATTCGGTGAAAGACGGTAAGCGTGCAAGCGGGGTATCTCTCCAGATCTaGGAAGTACGGGTGATTCAG | + |
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Preference number: 5 (lower is better) Translates to: NGSLRPKHSVKDGKRASGVSLQI*EVRVIQ Trigger: CTGAATCACCCGTACTTCCAAGATCTGGAGAGATAC...CCCGCTTGCACGCTTACCGTCTTTCACCGAATGCTTTGGGCGTAGGCTCCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS-3UTR CAA 90 bp | TTAGCCAGGCAGTGGCAGGAAAATGAATTAGAAGTGCTGGTGGTTGAGAGCTTCAACAACCTGACCACGTaGGGGTGCTCGAAGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LARQWQENELEVLVVESFNNLTT*GCSKVS Trigger: GGAGACCTTCGAGCACCCCAACGTGGTCAGGTTGTT...GAAGCTCTCAACCACCAGCACTTCTAATTCATTTTCCTGCCACTGCCTGGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS-3UTR CAA 90 bp | CTACACTGGCAGCATTCAAGGTTAGAAAACGAAATGGCAGCACAATTGGTCAGCAACAACCTGACCACGTaGGGGTGCTCGAAGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LHWQHSRLENEMAAQLVSNNLTT*GCSKVS Trigger: GGAGACCTTCGAGCACCCCAACGTGGTCAGGTTGTT...GCTGACCAATTGTGCTGCCATTTCGTTTTCTAACCTTGAATGCTGCCAGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS-3UTR CAA 90 bp | AAGCAGGCCCAGCAGCTGCAGGCGGATTACATCATAACTCAGCTGGGCCTGGATGTAAGTGGTCAAGTCTaGATCAACATGCTCAAACAC | + |
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Preference number: 5 (lower is better) Translates to: KQAQQLQADYIITQLGLDVSGQV*INMLKH Trigger: GTGTTTGAGCATGTTGATCAAGACTTGACCACTTAC...ATCCAGGCCCAGCTGAGTTATGATGTAATCCGCCTGCAGCTGCTGGGCCTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS-3UTR CAA 90 bp | CAAGGGGATACTGTTAGGGTTTCGGAATGGGAGCCTACGCCCAAAGCATTCGGTGAGTTCAGGTTGTCCTaGTATCTCTCCAGATCTTGG | + |
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Preference number: 5 (lower is better) Translates to: QGDTVRVSEWEPTPKAFGEFRLS*YLSRSW Trigger: CCAAGATCTGGAGAGATACAAGGACAACCTGAACTC...ACCGAATGCTTTGGGCGTAGGCTCCCATTCCGAAACCCTAACAGTATCCCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS-3UTR CAA 90 bp | AATGGGAGCCTACGCCCAAAGCATTCGGTGAAAGACGGTAAGCGTGCAAGCGGGTTCAGAAGTAGGTCTTaGCCTAGTTCGTCAATATCT | + |
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Preference number: 5 (lower is better) Translates to: NGSLRPKHSVKDGKRASGFRSRS*PSSSIS Trigger: AGATATTGACGAACTAGGCAAAGACCTACTTCTGAA...CCCGCTTGCACGCTTACCGTCTTTCACCGAATGCTTTGGGCGTAGGCTCCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS CCA 90 bp | GTAGGTCTTTGCCTAGTTCGTCAATATCTGTCACAAACTTCTCGATaGGTTGAGCAGATTTGGAATGAAAAGCCTGCCGGGGAAGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: VGLCLVRQYLSQTSR*VEQIWNEKPAGEGP Trigger: TGGCCCTTCCCCGGCAGGCTTTTCATTCCAAATCTGCTCAACCCATCGAGAAGTTTGTGACAGATATTGACGAACTAGGCAAAGACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS-3UTR CAA 90 bp | ATTGACCAGTATTTTCATCAGCTCCAAGGACGGGAGCAAAGGCCTTCAGCTCAGGTATCTCTCCAGATCTaGGAAGTACGGGTGATTCAG | + |
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Preference number: 5 (lower is better) Translates to: IDQYFHQLQGREQRPSAQVSLQI*EVRVIQ Trigger: CTGAATCACCCGTACTTCCAAGATCTGGAGAGATAC...CTGAGCTGAAGGCCTTTGCTCCCGTCCTTGGAGCTGATGAAAATACTGGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165117.8 |
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| CDS TCA 90 bp | TCTTCCTCTCCTGGGAGTCCAATGATGTCCAAGATTTTTCCTAGTTaGTCCACGTCTGAACTTCCACGAAAAAGAGGCTTTCTGCGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SSSPGSPMMSKIFPS*STSELPRKRGFLRN Trigger: GTTTCGCAGAAAGCCTCTTTTTCGTGGAAGTTCAGACGTGGATCAACTAGGAAAAATCTTGGACATCATTGGACTCCCAGGAGAGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS-3UTR CAA 90 bp | TCTTCTCTCTTACACACACATACGCATGCACACACACTCACAAGTACCAAAGCAGAGTTCAGGTTGTCCTaGTATCTCTCCAGATCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SSLLHTHTHAHTLTSTKAEFRLS*YLSRSW Trigger: CCAAGATCTGGAGAGATACAAGGACAACCTGAACTC...TGCTTTGGTACTTGTGAGTGTGTGTGCATGCGTATGTGTGTGTAAGAGAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS CCA 90 bp | CTGAAACATCATATCCTTTATGGTTTCTGTGGGTACGCCGGGCTCTaGAACTTTATCCAAGTAAGTGGTCAAGTCTTGATCAACATGCTC | + |
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Preference number: 5 (lower is better) Translates to: LKHHILYGFCGYAGL*NFIQVSGQVLINML Trigger: GAGCATGTTGATCAAGACTTGACCACTTACTTGGATAAAGTTCCAGAGCCCGGCGTACCCACAGAAACCATAAAGGATATGATGTTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS-3UTR CAA 90 bp | TCCCACCCTACACTGGCAGCATTCAAGGTTAGAAAACGAAATGGCAGCACAATTGTAAGTGGTCAAGTCTaGATCAACATGCTCAAACAC | + |
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Preference number: 5 (lower is better) Translates to: SHPTLAAFKVRKRNGSTIVSGQV*INMLKH Trigger: GTGTTTGAGCATGTTGATCAAGACTTGACCACTTAC...AATTGTGCTGCCATTTCGTTTTCTAACCTTGAATGCTGCCAGTGTAGGGTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS-3UTR CAA 90 bp | TCCCACCCTACACTGGCAGCATTCAAGGTTAGAAAACGAAATGGCAGCACAATTTTCAGAAGTAGGTCTTaGCCTAGTTCGTCAATATCT | + |
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Preference number: 5 (lower is better) Translates to: SHPTLAAFKVRKRNGSTIFRSRS*PSSSIS Trigger: AGATATTGACGAACTAGGCAAAGACCTACTTCTGAA...AATTGTGCTGCCATTTCGTTTTCTAACCTTGAATGCTGCCAGTGTAGGGTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS-3UTR CAA 90 bp | TCTTCTCTCTTACACACACATACGCATGCACACACACTCACAAGTACCAAAGCAAAACTTCTCGATGGGTaGAGCAGATTTGGAATGAAA | + |
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Preference number: 5 (lower is better) Translates to: SSLLHTHTHAHTLTSTKAKLLDG*SRFGMK Trigger: TTTCATTCCAAATCTGCTCAACCCATCGAGAAGTTT...TGCTTTGGTACTTGTGAGTGTGTGTGCATGCGTATGTGTGTGTAAGAGAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS GCA 72 bp | CGGATGGTGGAGAGCGGCATGCCCTCCTCACTGGTCTaGACTCGCACGCGCTTCAGAGCCACGAAGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RMVESGMPSSLV*TRTRFRATKRP Trigger: CGGCCGCTTCGTGGCTCTGAAGCGCGTGCGAGTGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCATCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
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| CDS GCA 72 bp | TCAGCACCGCCACCTCGCGGATGGTGGAGAGCGGCATaGCCTCCTCACTGGTCTGCACTCGCACGCGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SAPPPRGWWRAA*PPHWSALARAS Trigger: TGAAGCGCGTGCGAGTGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
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| CDS CCA 72 bp | CCTCGCGGATGGTGGAGAGCGGCATGCCCTCCTCACTaGTCTGCACTCGCACGCGCTTCAGAGCCACGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PRGWWRAACPPH*SALARASEPRS Trigger: GCTTCGTGGCTCTGAAGCGCGTGCGAGTGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
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| CDS CCA 72 bp | AGGTCTCCAGGTGCCTCAGCACCGCCACCTCGCGGATaGTGGAGAGCGGCATGCCCTCCTCACTGGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RSPGASAPPPRG*WRAACPPHWSA Trigger: TGCAGACCAGTGAGGAGGGCATGCCGCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
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| CDS GCA 72 bp | AACCTGACCACGTTGGGGTGCTCGAAGGTCTCCAGGTaGCTCAGCACCGCCACCTCGCGGATGGTGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: NLTTLGCSKVSR*LSTATSRMVES Trigger: GCTCTCCACCATCCGCGAGGTGGCGGTGCTGAGGCACCTGGAGACCTTCGAGCACCCCAACGTGGTCAGGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 ENSMUST00000197385.2 |
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| CDS GCA 72 bp | ACTGTGCACACATCAAACAACCTGACCACGTTGGGGTaGTCGAAGGTCTCCAGGTGCCTCAGCACCGCCACC | + |
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Preference number: 6 (lower is better) Translates to: TVHTSNNLTTLG*SKVSRCLSTAT Trigger: GGTGGCGGTGCTGAGGCACCTGGAGACCTTCGAGCACCCCAACGTGGTCAGGTTGTTTGATGTGTGCACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS TCA 72 bp | GTGTTCAGCTCCGAGGTGCTCTGGTTGGATGGCAGGTaGGAGTTCAGGTTGTCCTTGTATCTCTCCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: VFSSEVLWLDGR*EFRLSLYLSRS Trigger: AGATCTGGAGAGATACAAGGACAACCTGAACTCTCACCTGCCATCCAACCAGAGCACCTCGGAGCTGAACAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS CCA 72 bp | TATCTGTCACAAACTTCTCGATGGGTTGAGCAGATTTaGAATGAAAAGCCTGCCGGGGAAGGGCCACGTCCC | + |
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Preference number: 6 (lower is better) Translates to: YLSQTSRWVEQI*NEKPAGEGPRP Trigger: GGGACGTGGCCCTTCCCCGGCAGGCTTTTCATTCCAAATCTGCTCAACCCATCGAGAAGTTTGTGACAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS CCA 72 bp | TGCCTAGTTCGTCAATATCTGTCACAAACTTCTCGATaGGTTGAGCAGATTTGGAATGAAAAGCCTGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: CLVRQYLSQTSR*VEQIWNEKPAG Trigger: CCCGGCAGGCTTTTCATTCCAAATCTGCTCAACCCATCGAGAAGTTTGTGACAGATATTGACGAACTAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS CCA 72 bp | CATATCCTTTATGGTTTCTGTGGGTACGCCGGGCTCTaGAACTTTATCCAAGTAAGTGGTCAAGTCTTGATC | + |
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Preference number: 6 (lower is better) Translates to: HILYGFCGYAGL*NFIQVSGQVLI Trigger: GATCAAGACTTGACCACTTACTTGGATAAAGTTCCAGAGCCCGGCGTACCCACAGAAACCATAAAGGATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS CCA 72 bp | GGAGAAGCTGAAACATCATATCCTTTATGGTTTCTGTaGGTACGCCGGGCTCTGGAACTTTATCCAAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: GEAETSYPLWFL*VRRALELYPSK Trigger: CTTACTTGGATAAAGTTCCAGAGCCCGGCGTACCCACAGAAACCATAAAGGATATGATGTTTCAGCTTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS TCA 72 bp | CCTGGGAGTCCAATGATGTCCAAGATTTTTCCTAGTTaGTCCACGTCTGAACTTCCACGAAAAAGAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: PGSPMMSKIFPS*STSELPRKRGF Trigger: AAAGCCTCTTTTTCGTGGAAGTTCAGACGTGGATCAACTAGGAAAAATCTTGGACATCATTGGACTCCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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| CDS CAA 72 bp | GCTGGATTAAACGTCAGGCATTTCAGAAGTAGGTCTTaGCCTAGTTCGTCAATATCTGTCACAAACTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: AGLNVRHFRSRS*PSSSISVTNFS Trigger: CGAGAAGTTTGTGACAGATATTGACGAACTAGGCAAAGACCTACTTCTGAAATGCCTGACGTTTAATCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042410.5 ENSMUST00000165117.8 |
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