Pregenerated sensors for CDK5RAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027487Ensembl transcript IDs: ENSMUST00000028990.10, ENSMUST00000109730.3, ENSMUST00000109731.8
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACATCTTTAACCCCTGAACTCAGGCAGAAGAGGCAGATGGATCAATaGCAGCCTGGTCTAGGGAGTGAGCTCCAGGGAAACCCCATCTTG | + |
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Preference number: 1 (lower is better) Translates to: TSLTPELRQKRQMDQ*QPGLGSELQGNPIL Trigger: CAAGATGGGGTTTCCCTGGAGCTCACTCCCTAGACCAGGCTGGCATTGATCCATCTGCCTCTTCTGCCTGAGTTCAGGGGTTAAAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| 3UTR CCA 90 bp | GCATTTGTAAGCTGCCCCACACAGATAGATGCTGGGAACCAAATCTaGGTCCCCTGTAAGAACAGTATATGCTGCTTACTGCTGATACAT | + |
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Preference number: 1 (lower is better) Translates to: AFVSCPTQIDAGNQI*VPCKNSICCLLLIH Trigger: ATGTATCAGCAGTAAGCAGCATATACTGTTCTTACAGGGGACCCAGATTTGGTTCCCAGCATCTATCTGTGTGGGGCAGCTTACAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| 3UTR GCA 90 bp | TTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTaGTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGC | + |
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Preference number: 1 (lower is better) Translates to: FYRQQRNVLFHLVQR*FKTITCLQSMRKTC Trigger: GCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| 3UTR-3UTR TCA 90 bp | CTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACCATGTCTCCAAAGCATaGGAAAAACCTGCCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LSTTKKCTLPFGAKVLQDHVSKA*EKPAQV Trigger: GACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATG...GTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCACATGTCTCCAAAGCATaGGAAAAACCTGCCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: IVTVVLSTTKKCTLPFGAHVSKA*EKPAQV Trigger: GACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATG...TGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| 3UTR GCA 72 bp | ACCCCTGAACTCAGGCAGAAGAGGCAGATGGATCAATaGCAGCCTGGTCTAGGGAGTGAGCTCCAGGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: TPELRQKRQMDQ*QPGLGSELQGN Trigger: GTTTCCCTGGAGCTCACTCCCTAGACCAGGCTGGCATTGATCCATCTGCCTCTTCTGCCTGAGTTCAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| 3UTR TCA 72 bp | AGTGAACTGGTGGTGGTAGCACACATCTTTAACCCCTaGACTCAGGCAGAAGAGGCAGATGGATCAATGCCA | + |
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Preference number: 3 (lower is better) Translates to: SELVVVAHIFNP*TQAEEADGSMP Trigger: TGGCATTGATCCATCTGCCTCTTCTGCCTGAGTTCAGGGGTTAAAGATGTGTGCTACCACCACCAGTTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| 3UTR CCA 72 bp | AGCTGCCCCACACAGATAGATGCTGGGAACCAAATCTaGGTCCCCTGTAAGAACAGTATATGCTGCTTACTG | + |
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Preference number: 3 (lower is better) Translates to: SCPTQIDAGNQI*VPCKNSICCLL Trigger: CAGTAAGCAGCATATACTGTTCTTACAGGGGACCCAGATTTGGTTCCCAGCATCTATCTGTGTGGGGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| 3UTR TCA 72 bp | CCTGTGCAAGAGTGTGCACATGAGTGTAGTTGCCTGTaGAATTCAGAACACAGAGTTGAATCTCCTGGACCT | + |
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Preference number: 3 (lower is better) Translates to: PVQECAHECSCL*NSEHRVESPGP Trigger: AGGTCCAGGAGATTCAACTCTGTGTTCTGAATTTCACAGGCAACTACACTCATGTGCACACTCTTGCACAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| 3UTR GCA 72 bp | CAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTaGTTCAAGACTATTACATGTCTCCAAAGCATGAGA | + |
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Preference number: 3 (lower is better) Translates to: QQRNVLFHLVQR*FKTITCLQSMR Trigger: TCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| 3UTR GCA 72 bp | TGCTTACTGCTGATACATCTCTCCAGCTCCATAGTTTaGTTTTTAGAGGGTTGTTTTTGTTTGTTTGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: CLLLIHLSSSIV*FLEGCFCLFVW Trigger: CCAAACAAACAAACAAAAACAACCCTCTAAAAAGCAAACTATGGAGCTGGAGAGATGTATCAGCAGTAAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR CCA 90 bp | CACACATCTTTAACCCCTGAACTCAGGCAGAAGAGGCAGATGGATCAATGCCAGCGAGAGATAGGGAGGTaGGTCCTCCACCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTSLTPELRQKRQMDQCQREIGR*VLHLWR Trigger: TCTCCAGAGGTGGAGGACCCACCTCCCTATCTCTCG...CTGGCATTGATCCATCTGCCTCTTCTGCCTGAGTTCAGGGGTTAAAGATGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR CCA 90 bp | GTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCGAGAATGGAGGCAACTaGCCGGCTCCTCTCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: VLQDYYMSPKHEKNLPKSENGGN*PAPLPA Trigger: GGCCGGGAGAGGAGCCGGCCAGTTGCCTCCATTCTC...GGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | ATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTAATCCAGGAGAATGGAGGCAACTaGCCGGCTCCTCTCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: ITCLQSMRKTCPSPLLIQENGGN*PAPLPA Trigger: GGCCGGGAGAGGAGCCGGCCAGTTGCCTCCATTCTC...CTGGATTAGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | CACACATCTTTAACCCCTGAACTCAGGCAGAAGAGGCAGATGGATCAATGCCAGGAGCTGAAGTCCTTCTaGGCTTCTGAGCTCTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: HTSLTPELRQKRQMDQCQELKSF*ASELFA Trigger: GGCGAAGAGCTCAGAAGCTCAGAAGGACTTCAGCTC...CTGGCATTGATCCATCTGCCTCTTCTGCCTGAGTTCAGGGGTTAAAGATGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR CCA 90 bp | GTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCCGGCTGCTTCCACTCTaGGCTGGCAGGTGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: VLQDYYMSPKHEKNLPKSRLLPL*AGRWIC Trigger: GCAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCG...GGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | ATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTAATCCAGAGGCAGAAGTGGCACTaGGGCTCGTCTGGACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: ITCLQSMRKTCPSPLLIQRQKWH*GSSGLA Trigger: TGCCAGTCCAGACGAGCCCCAGTGCCACTTCTGCCT...CTGGATTAGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | ACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTAATCCAGCAGTGGGGTGAGGAGAGGTaGATCGGATCCTCATTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TCLQSMRKTCPSPLLIQQWGEER*IGSSFQ Trigger: CTGAAATGAGGATCCGATTCACCTCTCCTCACCCCA...CTGCTGGATTAGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | CAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTCATCCAGTACACGGCTaGTTCCACTCTGGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QDYYMSPKHEKNLPKSTPHPVHG*FHSGLA Trigger: TGCCAGCCCAGAGTGGAAGCAGCCGTGTACTGGATG...AGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCCGAGAGATAGGGAGGTaGGTCCTCCACCTCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: AKVLQDYYMSPKHEKNLPREIGR*VLHLWR Trigger: TCTCCAGAGGTGGAGGACCCACCTCCCTATCTCTCG...GGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | AAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGAGGCAGAAGTGGCACTaGGGCTCGTCTGGACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVLQDYYMSPKHEKNLPKRQKWH*GSSGLA Trigger: TGCCAGTCCAGACGAGCCCCAGTGCCACTTCTGCCT...CTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | CAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTGAGCTGAAGTCCTTCTaGGCTTCTGAGCTCTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: QDYYMSPKHEKNLPKSTPELKSF*ASELFA Trigger: GGCGAAGAGCTCAGAAGCTCAGAAGGACTTCAGCTC...AGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | CACACATCTTTAACCCCTGAACTCAGGCAGAAGAGGCAGATGGATCAATGCCAGTTCAGGACTTTGAGCTaGTGTAAGCGGTTCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: HTSLTPELRQKRQMDQCQFRTLS*CKRFQM Trigger: CATCTGGAACCGCTTACATCAGCTCAAAGTCCTGAA...CTGGCATTGATCCATCTGCCTCTTCTGCCTGAGTTCAGGGGTTAAAGATGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR GCA 90 bp | ACACAGATAGATGCTGGGAACCAAATCTGGGTCCCCTGTAAGAACAGTATATGCGACTGGGACAAGGAGTaGTGGACACACTGCTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: TQIDAGNQIWVPCKNSICDWDKE*WTHCFV Trigger: CACAAAGCAGTGTGTCCAGCACTCCTTGTCCCAGTC...GCATATACTGTTCTTACAGGGGACCCAGATTTGGTTCCCAGCATCTATCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR GCA 90 bp | AACCAAATCTGGGTCCCCTGTAAGAACAGTATATGCTGCTTACTGCTGATACATCAGCCTCTTGGAGGTTaGTGGTCCGAAGGTAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: NQIWVPCKNSICCLLLIHQPLGG*WSEGSH Trigger: GTGGCTACCTTCGGACCAGCAACCTCCAAGAGGCTG...ATGTATCAGCAGTAAGCAGCATATACTGTTCTTACAGGGGACCCAGATTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR CCA 90 bp | AACCAAATCTGGGTCCCCTGTAAGAACAGTATATGCTGCTTACTGCTGATACATGTAAGCGGTTCCAGATaGTCTGCTCGGCCTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: NQIWVPCKNSICCLLLIHVSGSR*SARPSP Trigger: GGGAGAAGGCCGAGCAGACCATCTGGAACCGCTTAC...ATGTATCAGCAGTAAGCAGCATATACTGTTCTTACAGGGGACCCAGATTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR CCA 90 bp | GTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCGCACTGGGGCTCGTCTaGACTGGCATGATATCTGCG | + |
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Preference number: 4 (lower is better) Translates to: VLFHLVQRCFKTITCLQSALGLV*TGMISA Trigger: CGCAGATATCATGCCAGTCCAGACGAGCCCCAGTGC...GCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | GTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCGAGCTGAAGTCCTTCTaGGCTTCTGAGCTCTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: VLFHLVQRCFKTITCLQSELKSF*ASELFA Trigger: GGCGAAGAGCTCAGAAGCTCAGAAGGACTTCAGCTC...GCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | AACCAAATCTGGGTCCCCTGTAAGAACAGTATATGCTGCTTACTGCTGATACATTGGCTAGCCTGGAGCTaGAGTCCTTCTGAGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: NQIWVPCKNSICCLLLIHWLAWS*SPSELL Trigger: CAGAAGCTCAGAAGGACTTCAGCTCCAGGCTAGCCA...ATGTATCAGCAGTAAGCAGCATATACTGTTCTTACAGGGGACCCAGATTTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR TCA 90 bp | GTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCACATTTGCTGCTTGCTaGCCTGACTCCACCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLFHLVQRCFKTITCLQSTFAAC*PDSTTA Trigger: GGCTGTGGTGGAGTCAGGTCAGCAAGCAGCAAATGT...GCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | ACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTAATCCCTCTTGGAGGTTGCTaGTCCGAAGGTAGCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: TITCLQSMRKTCPSPLLIPLGGC*SEGSHS Trigger: AGAGTGGCTACCTTCGGACCAGCAACCTCCAAGAGG...GATTAGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | TACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCAGTAAGCGGTTCCAGATaGTCTGCTCGGCCTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: YSSIWCKGASRLLHVSKAVSGSR*SARPSP Trigger: GGGAGAAGGCCGAGCAGACCATCTGGAACCGCTTAC...TGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCCTCTGGGCTGGCAGGTaGATCTGCTTACAGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: AKVLQDYYMSPKHEKNLPLWAGR*ICLQML Trigger: CAACATCTGTAAGCAGATCCACCTGCCAGCCCAGAG...GGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | GACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTAATGCTTCCACTCTGGGCTaGCAGGTGGATCTGCTTACA | + |
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Preference number: 4 (lower is better) Translates to: DYYMSPKHEKNLPKSTPNASTLG*QVDLLT Trigger: TGTAAGCAGATCCACCTGCCAGCCCAGAGTGGAAGC...ATTAGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | ACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACCGGCTGCTTCCACTCTaGGCTGGCAGGTGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: TTKKCTLPFGAKVLQDYYRLLPL*AGRWIC Trigger: GCAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCG...GTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | TACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGGCTAGCCTGGAGCTaGAGTCCTTCTGAGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: YSSIWCKGASRLLHVSKAWLAWS*SPSELL Trigger: CAGAAGCTCAGAAGGACTTCAGCTCCAGGCTAGCCA...TGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | TTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGACCATCTTCTCCCTGTTaGGGATCTCTCCCTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FHLVQRCFKTITCLQSMRPSSPC*GSLPSA Trigger: GGCTGAAGGGAGAGATCCTCAACAGGGAGAAGATGG...TCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | TACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCACCATCTTCTCCCTGTTaGGGATCTCTCCCTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: YSSIWCKGASRLLHVSKAPSSPC*GSLPSA Trigger: GGCTGAAGGGAGAGATCCTCAACAGGGAGAAGATGG...TGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | CTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTGACTGGGACAAGGAGTaGTGGACACACTGCTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: LQDYYMSPKHEKNLPKSTDWDKE*WTHCFV Trigger: CACAAAGCAGTGTGTCCAGCACTCCTTGTCCCAGTC...AGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | TTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGCAGCCTCTTGGAGGTTaGTGGTCCGAAGGTAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FYRQQRNVLFHLVQRCFKQPLGG*WSEGSH Trigger: GTGGCTACCTTCGGACCAGCAACCTCCAAGAGGCTG...CTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | GTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCGCACGATACAGTAACTaGACATGTTGTCGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: VLFHLVQRCFKTITCLQSARYSN*TCCRSP Trigger: GGGGCTGCGACAACATGTGCAGTTACTGTATCGTGC...GCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | AACCAAATCTGGGTCCCCTGTAAGAACAGTATATGCTGCTTACTGCTGATACATTGGGACAAGGAGTGCTaGACACACTGCTTTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: NQIWVPCKNSICCLLLIHWDKEC*THCFVL Trigger: GAGCACAAAGCAGTGTGTCCAGCACTCCTTGTCCCA...ATGTATCAGCAGTAAGCAGCATATACTGTTCTTACAGGGGACCCAGATTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR CCA 90 bp | GTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCTGGGACAAGGAGTGCTaGACACACTGCTTTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VLFHLVQRCFKTITCLQSWDKEC*THCFVL Trigger: GAGCACAAAGCAGTGTGTCCAGCACTCCTTGTCCCA...GCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | ATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTACGAGAGATAGGGAGGTaGGTCCTCCACCTCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: IDNKEMYSSIWCKGASRLREIGR*VLHLWR Trigger: TCTCCAGAGGTGGAGGACCCACCTCCCTATCTCTCG...TAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | AAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAGCACTGGGGCTCGTCTaGACTGGCATGATATCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KCTLPFGAKVLQDYYMSPALGLV*TGMISA Trigger: CGCAGATATCATGCCAGTCCAGACGAGCCCCAGTGC...TGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | GTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATACAAAGGCAGAAGTaGCACTGGGGCTCGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLFHLVQRCFKTITCLQSIQRQK*HWGSSG Trigger: TCCAGACGAGCCCCAGTGCCACTTCTGCCTTTGTAT...GCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCTTCAGGACTTTGAGCTaGTGTAAGCGGTTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AKVLQDYYMSPKHEKNLPFRTLS*CKRFQM Trigger: CATCTGGAACCGCTTACATCAGCTCAAAGTCCTGAA...GGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | TTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGATGGGGTGAGGAGAGGTaGATCGGATCCTCATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FHLVQRCFKTITCLQSMRWGEER*IGSSFQ Trigger: CTGAAATGAGGATCCGATTCACCTCTCCTCACCCCA...TCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAGGAAAATCCTTGGGGTaGGGAGAGGTGAATCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PFGAKVLQDYYMSPKHEKGKSLG*GEVNRI Trigger: GATCCGATTCACCTCTCCTCACCCCAAGGATTTTCC...TTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | ATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTAATCCAGCACATATGCTTCTCTTaGATATCCTCTCCGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITCLQSMRKTCPSPLLIQHICFS*ISSPHG Trigger: GCCATGCGGAGAGGATATTCAAGAGAAGCATATGTG...CTGGATTAGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | CAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTTCATCCTTCAGCCTGTaGTATGCTCGTGTCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QDYYMSPKHEKNLPKSTPSSFSL*YARVFC Trigger: GCAAAAGACACGAGCATATCACAGGCTGAAGGATGA...AGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGCAGCCTCTTGGAGGTTaGTGGTCCGAAGGTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKKCTLPFGAKVLQDYYMQPLGG*WSEGSH Trigger: GTGGCTACCTTCGGACCAGCAACCTCCAAGAGGCTG...CATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | TTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGCGGTTCCAGATGGTCTaGTCGGCCTTCTCCCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: FYRQQRNVLFHLVQRCFKRFQMV*SAFSLI Trigger: TATCAGGGAGAAGGCCGAGCAGACCATCTGGAACCG...CTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | CAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTGACTGGCATGATATCTaGGTAGGTCTCATCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QDYYMSPKHEKNLPKSTPDWHDI*VGLIQR Trigger: TCTCTGGATGAGACCTACGCAGATATCATGCCAGTC...AGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | ACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTAATCCAGCAGAATCACCTTAAGGTTTaGATCATTCCGGCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCLQSMRKTCPSPLLIQQNHLKV*IIPATK Trigger: CTTTGTGGCCGGAATGATGCAAACCTTAAGGTGATT...CTGCTGGATTAGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | CTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTGGGACAAGGAGTGCTaGACACACTGCTTTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTTKKCTLPFGAKVLQDWDKEC*THCFVL Trigger: GAGCACAAAGCAGTGTGTCCAGCACTCCTTGTCCCA...GTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCACCTCTTGGAGGTTGCTaGTCCGAAGGTAGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSIDNKEMYSSIWCKGASPLGGC*SEGSHS Trigger: AGAGTGGCTACCTTCGGACCAGCAACCTCCAAGAGG...TGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | ACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTAATCCAGCAGCCACTGAGGTCTTATTaGCTTTTGAAGCTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TCLQSMRKTCPSPLLIQQPLRSY*LLKLLL Trigger: GAGAAGAAGCTTCAAAAGCCAATAAGACCTCAGTGG...CTGCTGGATTAGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | TACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATCGTCTGGACTGGCATaGTATCTGCGTAGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YSSIWCKGASRLLHVSKASSGLA*YLRRSH Trigger: ATGAGACCTACGCAGATATCATGCCAGTCCAGACGA...TGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | AATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAGGAAAATCCTTGGGGTaGGGAGAGGTGAATCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: NVLFHLVQRCFKTITCLQGKSLG*GEVNRI Trigger: GATCCGATTCACCTCTCCTCACCCCAAGGATTTTCC...TTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | CATCTCTCCAGCTCCATAGTTTGCTTTTTAGAGGGTTGTTTTTGTTTGTTTGTTCGGTTCCAGATGGTCTaGTCGGCCTTCTCCCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSIVCFLEGCFCLFVRFQMV*SAFSLI Trigger: TATCAGGGAGAAGGCCGAGCAGACCATCTGGAACCG...AACAAACAAACAAAAACAACCCTCTAAAAAGCAAACTATGGAGCTGGAGAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
||
| CDS-3UTR GCA 90 bp | ACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGCGGTTCCAGATGGTCTaGTCGGCCTTCTCCCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: TKKCTLPFGAKVLQDYYMRFQMV*SAFSLI Trigger: TATCAGGGAGAAGGCCGAGCAGACCATCTGGAACCG...CATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | TGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAACATCCAGTACACGGCTaGTTCCACTCTGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CNSCSIDNKEMYSSIWCKHPVHG*FHSGLA Trigger: TGCCAGCCCAGAGTGGAAGCAGCCGTGTACTGGATG...TTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | GATACATCTCTCCAGCTCCATAGTTTGCTTTTTAGAGGGTTGTTTTTGTTTGTTCCTCTTGGAGGTTGCTaGTCCGAAGGTAGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTSLQLHSLLFRGLFLFVPLGGC*SEGSHS Trigger: AGAGTGGCTACCTTCGGACCAGCAACCTCCAAGAGG...AACAAACAAAAACAACCCTCTAAAAAGCAAACTATGGAGCTGGAGAGATGTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAATCACATCAGCCTCTTaGAGGTTGCTGGTCCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSIDNKEMYSSIWCKGASITSAS*RLLVRR Trigger: CCTTCGGACCAGCAACCTCCAAGAGGCTGATGTGAT...TGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | ATTGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAGTAAGCGGTTCCAGATaGTCTGCTCGGCCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IVTVVLSTTKKCTLPFGAVSGSR*SARPSP Trigger: GGGAGAAGGCCGAGCAGACCATCTGGAACCGCTTAC...TGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | ACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACGCTTCCACTCTGGGCTaGCAGGTGGATCTGCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: TTKKCTLPFGAKVLQDYYASTLG*QVDLLT Trigger: TGTAAGCAGATCCACCTGCCAGCCCAGAGTGGAAGC...GTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | GTGCACATGAGTGTAGTTGCCTGTGAAATTCAGAACACAGAGTTGAATCTCCTGGAAGATGGTTTCTCTTaGGGAACTGAAGCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHMSVVACEIQNTELNLLEDGFS*GTEALL Trigger: AAGAAGTGCTTCAGTTCCTCAAGAGAAACCATCTTC...CAGGAGATTCAACTCTGTGTTCTGAATTTCACAGGCAACTACACTCATGTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR TCA 90 bp | TGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAACATTTGCTGCTTGCTaGCCTGACTCCACCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CNSCSIDNKEMYSSIWCKTFAAC*PDSTTA Trigger: GGCTGTGGTGGAGTCAGGTCAGCAAGCAGCAAATGT...TTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | AATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAATCGTCTGGACTGGCATaGTATCTGCGTAGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NVLFHLVQRCFKTITCLQSSGLA*YLRRSH Trigger: ATGAGACCTACGCAGATATCATGCCAGTCCAGACGA...TTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | CCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAAATCATCCTTCAGCCTGTaGTATGCTCGTGTCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFGAKVLQDYYMSPKHEKSSFSL*YARVFC Trigger: GCAAAAGACACGAGCATATCACAGGCTGAAGGATGA...TTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | CAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTGGTCTTATTGGCTTTTaGAGCTTCTTCTCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QDYYMSPKHEKNLPKSTPGLIGF*SFFSED Trigger: GTCTTCAGAGAAGAAGCTTCAAAAGCCAATAAGACC...AGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | ACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCAGCCTCTCAGCCATaGAGCCTAGAATCCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TKKCTLPFGAKVLQDYYMSASQP*SLESQS Trigger: GGATTGGGATTCTAGGCTGCATGGCTGAGAGGCTGA...CATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTTCAGCCTCTCAGCCATaGAGCCTAGAATCCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: KKCTLPFGAKVLQDYYMSSASQP*SLESQS Trigger: GGATTGGGATTCTAGGCTGCATGGCTGAGAGGCTGA...AGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | TTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGGCTGGCAGGTGGATCTaGTTACAGATGTTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FYRQQRNVLFHLVQRCFKAGRWI*LQMLCL Trigger: GAGACACAACATCTGTAAGCAGATCCACCTGCCAGC...CTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | TTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAGATATCCTCCACCTCTaGGTCAGGGAAAATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: FHLVQRCFKTITCLQSMRDILHL*VRENHL Trigger: AAGGTGATTTTCCCTGACGCAGAGGTGGAGGATATC...TCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | GATACATCTCTCCAGCTCCATAGTTTGCTTTTTAGAGGGTTGTTTTTGTTTGTTATCACATCAGCCTCTTaGAGGTTGCTGGTCCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTSLQLHSLLFRGLFLFVITSAS*RLLVRR Trigger: CCTTCGGACCAGCAACCTCCAAGAGGCTGATGTGAT...AACAAACAAAAACAACCCTCTAAAAAGCAAACTATGGAGCTGGAGAGATGTATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
||
| CDS-3UTR CCA 90 bp | GTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGATCACATCAGCCTCTTaGAGGTTGCTGGTCCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTVVLSTTKKCTLPFGAKITSAS*RLLVRR Trigger: CCTTCGGACCAGCAACCTCCAAGAGGCTGATGTGAT...CTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | GACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTAATACAAAGGCAGAAGTaGCACTGGGGCTCGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DNKEMYSSIWCKGASRLLIQRQK*HWGSSG Trigger: TCCAGACGAGCCCCAGTGCCACTTCTGCCTTTGTAT...TAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTGCATTATTGAACTaGACTTCCGAATTGTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQDYYMSPKHEKNLPKSTPALLN*TSELSR Trigger: TCGGGACAATTCGGAAGTCCAGTTCAATAATGCAGG...AGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCTGGGCTGGCAGGTaGATCTGCTTACAGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRNVLFHLVQRCFKTITCLWAGR*ICLQML Trigger: CAACATCTGTAAGCAGATCCACCTGCCAGCCCAGAG...ACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | AATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAATTCAGGACTTTGAGCTaGTGTAAGCGGTTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NVLFHLVQRCFKTITCLQFRTLS*CKRFQM Trigger: CATCTGGAACCGCTTACATCAGCTCAAAGTCCTGAA...TTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | TACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCACTCTCACGAATCAGCTaGAGAACCTCATCAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YSSIWCKGASRLLHVSKALSRIS*RTSSGK Trigger: TTTTCCTGATGAGGTTCTTCAGCTGATTCGTGAGAG...TGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | TTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGCACATATGCTTCTCTTaGATATCCTCTCCGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYRQQRNVLFHLVQRCFKHICFS*ISSPHG Trigger: GCCATGCGGAGAGGATATTCAAGAGAAGCATATGTG...CTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | CAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACAGGACACACTGCTTTGTaGTCTGCAGGTCCTAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QQRNVLFHLVQRCFKTITGHTAL*SAGPKQ Trigger: TTGCTTAGGACCTGCAGAGCACAAAGCAGTGTGTCC...TGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | GATACATCTCTCCAGCTCCATAGTTTGCTTTTTAGAGGGTTGTTTTTGTTTGTTGGACACACTGCTTTGTaGTCTGCAGGTCCTAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DTSLQLHSLLFRGLFLFVGHTAL*SAGPKQ Trigger: TTGCTTAGGACCTGCAGAGCACAAAGCAGTGTGTCC...AACAAACAAAAACAACCCTCTAAAAAGCAAACTATGGAGCTGGAGAGATGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
||
| CDS-3UTR GCA 90 bp | AATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAGACTGGCATGATATCTaGGTAGGTCTCATCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVLFHLVQRCFKTITCLQDWHDI*VGLIQR Trigger: TCTCTGGATGAGACCTACGCAGATATCATGCCAGTC...TTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | TGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGCACGATACAGTAACTaGACATGTTGTCGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CNSCSIDNKEMYSSIWCKARYSN*TCCRSP Trigger: GGGGCTGCGACAACATGTGCAGTTACTGTATCGTGC...TTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | CATCTCTCCAGCTCCATAGTTTGCTTTTTAGAGGGTTGTTTTTGTTTGTTTGTTTGGGTCCTCCACCTCTaGAGAAGATGGTTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSIVCFLEGCFCLFVWVLHL*RRWFLL Trigger: CAAGAGAAACCATCTTCTCCAGAGGTGGAGGACCCA...AACAAACAAACAAAAACAACCCTCTAAAAAGCAAACTATGGAGCTGGAGAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
||
| CDS-3UTR TCA 90 bp | TTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCCAGACCCTGCATTATTaGACTGGACTTCCGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFYRQQRNVLFHLVQRCFQTLHY*TGLPNC Trigger: ACAATTCGGAAGTCCAGTTCAATAATGCAGGGTCTG...GAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | TGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGACACACTGCTTTGTaGTCTGCAGGTCCTAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CNSCSIDNKEMYSSIWCKGHTAL*SAGPKQ Trigger: TTGCTTAGGACCTGCAGAGCACAAAGCAGTGTGTCC...TTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | ATTGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAGCTGGCAGGTGGATCTaGTTACAGATGTTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVTVVLSTTKKCTLPFGAAGRWI*LQMLCL Trigger: GAGACACAACATCTGTAAGCAGATCCACCTGCCAGC...TGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTGTGTCTTTTGCCTCATaGTGTATGCAAAGAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQDYYMSPKHEKNLPKSTVSFAS*CMQREN Trigger: GTTTTCTCTTTGCATACAGCATGAGGCAAAAGACAC...AGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | AAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTGATATCCTCCACCTCTaGGTCAGGGAAAATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKCTLPFGAKVLQDYYMSDILHL*VRENHL Trigger: AAGGTGATTTTCCCTGACGCAGAGGTGGAGGATATC...AGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCATGGGTCCTCCACCTCTaGAGAAGATGGTTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IVTVVLSTTKKCTLPFGAWVLHL*RRWFLL Trigger: CAAGAGAAACCATCTTCTCCAGAGGTGGAGGACCCA...TGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGCAGACCCTGCATTATTaGACTGGACTTCCGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKKCTLPFGAKVLQDYYMQTLHY*TGLPNC Trigger: ACAATTCGGAAGTCCAGTTCAATAATGCAGGGTCTG...CATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCTCTCACGAATCAGCTaGAGAACCTCATCAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKCTLPFGAKVLQDYYMSLSRIS*RTSSGK Trigger: TTTTCCTGATGAGGTTCTTCAGCTGATTCGTGAGAG...AGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | AAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCATATGCTCGTGTCTTTTaGCTCATGCTGTATGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KCTLPFGAKVLQDYYMSPYARVF*LMLYAK Trigger: CTTTGCATACAGCATGAGGCAAAAGACACGAGCATA...TGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAATCACCTTAAGGTTTaGATCATTCCGGCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSIDNKEMYSSIWCKGASNHLKV*IIPATK Trigger: CTTTGTGGCCGGAATGATGCAAACCTTAAGGTGATT...TGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | ACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACCACTCTTCTGTAAGATaGACCAGGCTATCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTKKCTLPFGAKVLQDYYHSSVR*TRLSLC Trigger: ACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTG...GTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | CATCTCTCCAGCTCCATAGTTTGCTTTTTAGAGGGTTGTTTTTGTTTGTTTGTTCACTCTTCTGTAAGATaGACCAGGCTATCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSSIVCFLEGCFCLFVHSSVR*TRLSLC Trigger: ACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTG...AACAAACAAACAAAAACAACCCTCTAAAAAGCAAACTATGGAGCTGGAGAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
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| CDS-3UTR CCA 90 bp | CAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCACTCTTCTGTAAGATaGACCAGGCTATCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRNVLFHLVQRCFKTITCHSSVR*TRLSLC Trigger: ACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTG...ACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR CCA 90 bp | AAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCACCACTGAGGTCTTATTaGCTTTTGAAGCTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KCTLPFGAKVLQDYYMSPPLRSY*LLKLLL Trigger: GAGAAGAAGCTTCAAAAGCCAATAAGACCTCAGTGG...TGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTGAAGATGGTTTCTCTTaGGGAACTGAAGCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRNVLFHLVQRCFKTITCEDGFS*GTEALL Trigger: AAGAAGTGCTTCAGTTCCTCAAGAGAAACCATCTTC...ACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | AAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCGGTCTTATTGGCTTTTaGAGCTTCTTCTCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KEMYSSIWCKGASRLLHVGLIGF*SFFSED Trigger: GTCTTCAGAGAAGAAGCTTCAAAAGCCAATAAGACC...GACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | AAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGAAACCGGTATTATACTaGACTTCTCTAAGTAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVLQDYYMSPKHEKNLPKKPVLY*TSLSKD Trigger: GTCTTTACTTAGAGAAGTGCAGTATAATACCGGTTT...CTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | AAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTATGCTCGTGTCTTTTaGCTCATGCTGTATGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEMYSSIWCKGASRLLHVYARVF*LMLYAK Trigger: CTTTGCATACAGCATGAGGCAAAAGACACGAGCATA...GACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CCA 90 bp | TGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAACCTGCATTATTGAACTaGACTTCCGAATTGTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CNSCSIDNKEMYSSIWCKPALLN*TSELSR Trigger: TCGGGACAATTCGGAAGTCCAGTTCAATAATGCAGG...TTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR TCA 90 bp | TGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGAAGATGGTTTCTCTTaGGGAACTGAAGCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CNSCSIDNKEMYSSIWCKEDGFS*GTEALL Trigger: AAGAAGTGCTTCAGTTCCTCAAGAGAAACCATCTTC...TTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | CAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACAGTGTCTTTTGCCTCATaGTGTATGCAAAGAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQRNVLFHLVQRCFKTITVSFAS*CMQREN Trigger: GTTTTCTCTTTGCATACAGCATGAGGCAAAAGACAC...TGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| 3UTR CAA 72 bp | TTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTaGGTGCAAAGGTGCTTCAAGACTATTACATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFYRQQRNVLFH*VQRCFKTITCL Trigger: GAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS-3UTR GCA 90 bp | GTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAAAACCGGTATTATACTaGACTTCTCTAAGTAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLSTTKKCTLPFGAKVLQKPVLY*TSLSKD Trigger: GTCTTTACTTAGAGAAGTGCAGTATAATACCGGTTT...TTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS TCA 90 bp | CATCGAGAATGGAGGCAACTGGCCGGCTCCTCTCCCGGCCACGCGTaGACGGCACGATACAGTAACTGCACATGTTGTCGCAGCCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: HREWRQLAGSSPGHA*TARYSNCTCCRSPA Trigger: TGCGGGGCTGCGACAACATGTGCAGTTACTGTATCGTGCCGTTCACGCGTGGCCGGGAGAGGAGCCGGCCAGTTGCCTCCATTCTCGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS CCA 90 bp | GCCCTGCTCGGACAGCTTCCTCACTTCATCGAGAATGGAGGCAACTaGCCGGCTCCTCTCCCGGCCACGCGTGAACGGCACGATACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ALLGQLPHFIENGGN*PAPLPATRERHDTV Trigger: TACTGTATCGTGCCGTTCACGCGTGGCCGGGAGAGGAGCCGGCCAGTTGCCTCCATTCTCGATGAAGTGAGGAAGCTGTCCGAGCAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS TCA 90 bp | GTAGGTCTCATCCAGAGAGAGAAGCACATTTGCTGCTTGCTGACCTaGCTCCACCACAGCCAGCAGCCGGGGAAGGTCTCGGTAGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VGLIQREKHICCLLT*LHHSQQPGKVSVGV Trigger: GACGCCTACCGAGACCTTCCCCGGCTGCTGGCTGTGGTGGAGTCAGGTCAGCAAGCAGCAAATGTGCTTCTCTCTCTGGATGAGACCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS TCA 90 bp | TCCTCAGAGGTACTCGAGAGCGTGGCCGCTTTGTCTTCAGGACTTTaGGCTGATGTAAGCGGTTCCAGATGGTCTGCTCGGCCTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSEVLESVAALSSGL*ADVSGSRWSARPSP Trigger: GGGAGAAGGCCGAGCAGACCATCTGGAACCGCTTACATCAGCTCAAAGTCCTGAAGACAAAGCGGCCACGCTCTCGAGTACCTCTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
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| CDS GCA 90 bp | CTTCGCCTCTGGACTGGGACAAGGAGTGCTGGACACACTGCTTTGTaGTCTGCAGGTCCTAAGCAACACCCAGCACATGGAGGTGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLWTGTRSAGHTAL*SAGPKQHPAHGGEW Trigger: CCATTCACCTCCATGTGCTGGGTGTTGCTTAGGACCTGCAGAGCACAAAGCAGTGTGTCCAGCACTCCTTGTCCCAGTCCAGAGGCGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
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| CDS TCA 90 bp | GGTAGGCGTCTGGACCAGCCAAGAGATCTACCATCTTCTCCCTGTTaGGGATCTCTCCCTTCAGCCTCTCAGCCATGCAGCCTAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GRRLDQPRDLPSSPC*GSLPSASQPCSLES Trigger: GGATTCTAGGCTGCATGGCTGAGAGGCTGAAGGGAGAGATCCTCAACAGGGAGAAGATGGTAGATCTCTTGGCTGGTCCAGACGCCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS CCA 90 bp | TCCTCTCCGCATGGCATCCAGTACACGGCTGCTTCCACTCTGGGCTaGCAGGTGGATCTGCTTACAGATGTTGTGTCTCTCACGAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPHGIQYTAASTLG*QVDLLTDVVSLTNQ Trigger: CTGATTCGTGAGAGACACAACATCTGTAAGCAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTACTGGATGCCATGCGGAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS TCA 90 bp | AGAGGTACTCGAGAGCGTGGCCGCTTTGTCTTCAGGACTTTGAGCTaGTGTAAGCGGTTCCAGATGGTCTGCTCGGCCTTCTCCCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: RGTRERGRFVFRTLS*CKRFQMVCSAFSLI Trigger: TATCAGGGAGAAGGCCGAGCAGACCATCTGGAACCGCTTACATCAGCTCAAAGTCCTGAAGACAAAGCGGCCACGCTCTCGAGTACCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
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| CDS CCA 90 bp | GAATATCCTCTCCGCATGGCATCCAGTACACGGCTGCTTCCACTCTaGGCTGGCAGGTGGATCTGCTTACAGATGTTGTGTCTCTCACGA | + |
|
Preference number: 5 (lower is better) Translates to: EYPLRMASSTRLLPL*AGRWICLQMLCLSR Trigger: TCGTGAGAGACACAACATCTGTAAGCAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTACTGGATGCCATGCGGAGAGGATATTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS GCA 90 bp | AAAGGCAGAAGTGGCACTGGGGCTCGTCTGGACTGGCATGATATCTaGGTAGGTCTCATCCAGAGAGAGAAGCACATTTGCTGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGRSGTGARLDWHDI*VGLIQREKHICCLL Trigger: CAGCAAGCAGCAAATGTGCTTCTCTCTCTGGATGAGACCTACGCAGATATCATGCCAGTCCAGACGAGCCCCAGTGCCACTTCTGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | ATTGGGGCAGGGACACACACGAGTACAGGTGTAGTCCAGAAGGGTGTTGGATATGCTGGACACACTGCTTaGTGCTCTGCAGGTCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: IGAGTHTSTGVVQKGVGYAGHTA*CSAGPK Trigger: CTTAGGACCTGCAGAGCACAAAGCAGTGTGTCCAGC...ATATCCAACACCCTTCTGGACTACACCTGTACTCGTGTGTGTCCCTGCCCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109730.3 |
||
| CDS TCA 90 bp | TGGATACAAAGGCAGAAGTGGCACTGGGGCTCGTCTGGACTGGCATaGTATCTGCGTAGGTCTCATCCAGAGAGAGAAGCACATTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WIQRQKWHWGSSGLA*YLRRSHPEREAHLL Trigger: CAGCAAATGTGCTTCTCTCTCTGGATGAGACCTACGCAGATATCATGCCAGTCCAGACGAGCCCCAGTGCCACTTCTGCCTTTGTATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS GCA 90 bp | ATGCTTCTCTTGAATATCCTCTCCGCATGGCATCCAGTACACGGCTaGTTCCACTCTGGGCTGGCAGGTGGATCTGCTTACAGATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: MLLLNILSAWHPVHG*FHSGLAGGSAYRCC Trigger: ACAACATCTGTAAGCAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTACTGGATGCCATGCGGAGAGGATATTCAAGAGAAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CCA 90 bp | CCTCTTGGAGGTTGCTGGTCCGAAGGTAGCCACTCTTCTGTAAGATaGACCAGGCTATCTCTGTGTCGTTCACGTTCATCTGACAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLGGCWSEGSHSSVR*TRLSLCRSRSSDSH Trigger: ATGGCTGTCAGATGAACGTGAACGACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTGGCTACCTTCGGACCAGCAACCTCCAAGAGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
||
| CDS GCA 90 bp | TTGAGCTCTGACCTTGAGCCCAGGGTTAGTGATATCCTCCACCTCTaGGTCAGGGAAAATCACCTTAAGGTTTGCATCATTCCGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSSDLEPRVSDILHL*VRENHLKVCIIPAT Trigger: TGTGGCCGGAATGATGCAAACCTTAAGGTGATTTTCCCTGACGCAGAGGTGGAGGATATCACTAACCCTGGGCTCAAGGTCAGAGCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CCA 90 bp | CATAATGGATACAAAGGCAGAAGTGGCACTGGGGCTCGTCTGGACTaGCATGATATCTGCGTAGGTCTCATCCAGAGAGAGAAGCACATT | + |
|
Preference number: 5 (lower is better) Translates to: HNGYKGRSGTGARLD*HDICVGLIQREKHI Trigger: AATGTGCTTCTCTCTCTGGATGAGACCTACGCAGATATCATGCCAGTCCAGACGAGCCCCAGTGCCACTTCTGCCTTTGTATCCATTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS TCA 90 bp | CCGGTATTATACTGCACTTCTCTAAGTAAAGACACTGTCTGCCGGTaGTCATCCTCTGTCTCTCCACAAAAGCCAGTGATGAAGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVLYCTSLSKDTVCR*SSSVSPQKPVMKSL Trigger: CAGCGACTTCATCACTGGCTTTTGTGGAGAGACAGAGGATGATCACCGGCAGACAGTGTCTTTACTTAGAGAAGTGCAGTATAATACCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS GCA 90 bp | AGTGATATCCTCCACCTCTGCGTCAGGGAAAATCACCTTAAGGTTTaGATCATTCCGGCCACAAAGGTCTGTGGTAGAACGTTTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SDILHLCVRENHLKV*IIPATKVCGRTFAE Trigger: TTCAGCAAACGTTCTACCACAGACCTTTGTGGCCGGAATGATGCAAACCTTAAGGTGATTTTCCCTGACGCAGAGGTGGAGGATATCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | TACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCACACATAGTCCCCAGGTaGAGCTCTGACCTTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YSSIWCKGASRLLHVSKAHIVPR*SSDLEP Trigger: GGGCTCAAGGTCAGAGCTCAACCTGGGGACTATGTG...TGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS TCA 90 bp | TCAGCTGAAGAACCTCATCAGGAAAATCCTTGGGGTGAGGAGAGGTaGATCGGATCCTCATTTCAGGATCGATTCTTGAAACCTGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAEEPHQENPWGEER*IGSSFQDRFLKPDP Trigger: TGGATCAGGTTTCAAGAATCGATCCTGAAATGAGGATCCGATTCACCTCTCCTCACCCCAAGGATTTTCCTGATGAGGTTCTTCAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGCTGGACACACTGCTTaGTGCTCTGCAGGTCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLSTTKKCTLPFGAKVLQAGHTA*CSAGPK Trigger: CTTAGGACCTGCAGAGCACAAAGCAGTGTGTCCAGC...TTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | ACATGTCTCCAAAGCATGAGAAAAACCTGCCCAAGTCCACTCCTAATCCAGCAGAAAACGAAGCCCTCCTaGTTTGGGTTTATAGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TCLQSMRKTCPSPLLIQQKTKPS*FGFIVG Trigger: ACCAACTATAAACCCAAACAAGGAGGGCTTCGTTTT...CTGCTGGATTAGGAGTGGACTTGGGCAGGTTTTTCTCATGCTTTGGAGACATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGCACATAGTCCCCAGGTaGAGCTCTGACCTTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TKKCTLPFGAKVLQDYYMHIVPR*SSDLEP Trigger: GGGCTCAAGGTCAGAGCTCAACCTGGGGACTATGTG...CATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCATGAGAAAGAGAGAGAAGCACATTaGCTGCTTGCTGACCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PFGAKVLQDYYMSPKHEKEREAH*LLADLT Trigger: AGTCAGGTCAGCAAGCAGCAAATGTGCTTCTCTCTC...TTTCTCATGCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | GTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTATTACATGTCTCCAAAGCGCAGACCCTGCATTATaGAACTGGACTTCCGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: VLFHLVQRCFKTITCLQSADPAL*NWTSEL Trigger: CAATTCGGAAGTCCAGTTCAATAATGCAGGGTCTGC...GCTTTGGAGACATGTAATAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS TCA 90 bp | TTATTGAACTGGACTTCCGAATTGTCCCGAAAACTATTAACATTCTaGCCAAGAAGTGTCACTTCTTTTAGGCCCTGCTCGGACAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLNWTSELSRKLLTF*PRSVTSFRPCSDSF Trigger: GAAGCTGTCCGAGCAGGGCCTAAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAAGTCCAGTTCAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCGAGAGAGAAGCACATTaGCTGCTTGCTGACCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LFYRQQRNVLFHLVQRCFEREAH*LLADLT Trigger: AGTCAGGTCAGCAAGCAGCAAATGTGCTTCTCTCTC...GAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCGCAGACCCTGCATTATaGAACTGGACTTCCGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LFYRQQRNVLFHLVQRCFADPAL*NWTSEL Trigger: CAATTCGGAAGTCCAGTTCAATAATGCAGGGTCTGC...GAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | ATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAAGACTACCACATATGCTTCTCTaGAATATCCTCTCCGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: IDNKEMYSSIWCKGASRLPHMLL*NILSAW Trigger: CCATGCGGAGAGGATATTCAAGAGAAGCATATGTGG...TAGTCTTGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCACCACATATGCTTCTCTaGAATATCCTCTCCGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CSIDNKEMYSSIWCKGASPHMLL*NILSAW Trigger: CCATGCGGAGAGGATATTCAAGAGAAGCATATGTGG...TGAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS TCA 90 bp | AAACGCCTTAATTTTACTTCTTCTGGAACATCATCCTTCAGCCTGTaGTATGCTCGTGTCTTTTGCCTCATGCTGTATGCAAAGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KRLNFTSSGTSSFSL*YARVFCLMLYAKRK Trigger: TTTTCTCTTTGCATACAGCATGAGGCAAAAGACACGAGCATATCACAGGCTGAAGGATGATGTTCCAGAAGAAGTAAAATTAAGGCGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAGGTGCTTCAACTGGACTTCCGAATaGTCCCGAAAACTATTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LFYRQQRNVLFHLVQRCFNWTSE*SRKLLT Trigger: TGTTAATAGTTTTCGGGACAATTCGGAAGTCCAGTT...GAAGCACCTTTGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTAACAGTTGTTCTATCGACAACAAAGAAATGTACTCTTCCATTTGGTGCAAAAACGAAGCCCTCCTaGTTTGGGTTTATAGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IVTVVLSTTKKCTLPFGAKTKPS*FGFIVG Trigger: ACCAACTATAAACCCAAACAAGGAGGGCTTCGTTTT...TGCACCAAATGGAAGAGTACATTTCTTTGTTGTCGATAGAACAACTGTTACAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CCA 72 bp | GGCCCTGCTCGGACAGCTTCCTCACTTCATCGAGAATaGAGGCAACTGGCCGGCTCCTCTCCCGGCCACGCG | + |
|
Preference number: 6 (lower is better) Translates to: GPARTASSLHRE*RQLAGSSPGHA Trigger: CGCGTGGCCGGGAGAGGAGCCGGCCAGTTGCCTCCATTCTCGATGAAGTGAGGAAGCTGTCCGAGCAGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS TCA 72 bp | TGGAGGCAACTGGCCGGCTCCTCTCCCGGCCACGCGTaGACGGCACGATACAGTAACTGCACATGTTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: WRQLAGSSPGHA*TARYSNCTCCR Trigger: GCGACAACATGTGCAGTTACTGTATCGTGCCGTTCACGCGTGGCCGGGAGAGGAGCCGGCCAGTTGCCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CCA 72 bp | CACAGCCAGCAGCCGGGGAAGGTCTCGGTAGGCGTCTaGACCAGCCAAGAGATCTACCATCTTCTCCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: HSQQPGKVSVGV*TSQEIYHLLPV Trigger: AACAGGGAGAAGATGGTAGATCTCTTGGCTGGTCCAGACGCCTACCGAGACCTTCCCCGGCTGCTGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS TCA 72 bp | GTCGGTCCAGTGGCTAGCCTGGAGCTGAAGTCCTTCTaGGCTTCTGAGCTCTTCGCCTCTGGACTGGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: VGPVASLELKSF*ASELFASGLGQ Trigger: TTGTCCCAGTCCAGAGGCGAAGAGCTCAGAAGCTCAGAAGGACTTCAGCTCCAGGCTAGCCACTGGACCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
||
| CDS TCA 72 bp | CGAGAGCGTGGCCGCTTTGTCTTCAGGACTTTGAGCTaGTGTAAGCGGTTCCAGATGGTCTGCTCGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RERGRFVFRTLS*CKRFQMVCSAF Trigger: GAAGGCCGAGCAGACCATCTGGAACCGCTTACATCAGCTCAAAGTCCTGAAGACAAAGCGGCCACGCTCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
||
| CDS CCA 72 bp | CTCCGCATGGCATCCAGTACACGGCTGCTTCCACTCTaGGCTGGCAGGTGGATCTGCTTACAGATGTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRMASSTRLLPL*AGRWICLQMLC Trigger: ACACAACATCTGTAAGCAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTACTGGATGCCATGCGGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CAA 90 bp | CTGAGAGCTGGCAGAGGTGATCTTCACCAGCACATAGTCCCCAGGTaGAGCTCTGACCTTGAGCCCAGGGTTAGTGATATCCTCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRAGRGDLHQHIVPR*SSDLEPRVSDILHL Trigger: GAGGTGGAGGATATCACTAACCCTGGGCTCAAGGTCAGAGCTCAACCTGGGGACTATGTGCTGGTGAAGATCACCTCTGCCAGCTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS TCA 72 bp | GTACTCGAGAGCGTGGCCGCTTTGTCTTCAGGACTTTaGGCTGATGTAAGCGGTTCCAGATGGTCTGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VLESVAALSSGL*ADVSGSRWSAR Trigger: CCGAGCAGACCATCTGGAACCGCTTACATCAGCTCAAAGTCCTGAAGACAAAGCGGCCACGCTCTCGAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
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| CDS TCA 72 bp | CTGGACCAGCCAAGAGATCTACCATCTTCTCCCTGTTaGGGATCTCTCCCTTCAGCCTCTCAGCCATGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LDQPRDLPSSPC*GSLPSASQPCS Trigger: GCTGCATGGCTGAGAGGCTGAAGGGAGAGATCCTCAACAGGGAGAAGATGGTAGATCTCTTGGCTGGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS TCA 72 bp | AGGCAGAAGTGGCACTGGGGCTCGTCTGGACTGGCATaGTATCTGCGTAGGTCTCATCCAGAGAGAGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RQKWHWGSSGLA*YLRRSHPEREA Trigger: TGCTTCTCTCTCTGGATGAGACCTACGCAGATATCATGCCAGTCCAGACGAGCCCCAGTGCCACTTCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS GCA 72 bp | TGGACTGGGACAAGGAGTGCTGGACACACTGCTTTGTaGTCTGCAGGTCCTAAGCAACACCCAGCACATGGA | + |
|
Preference number: 6 (lower is better) Translates to: WTGTRSAGHTAL*SAGPKQHPAHG Trigger: TCCATGTGCTGGGTGTTGCTTAGGACCTGCAGAGCACAAAGCAGTGTGTCCAGCACTCCTTGTCCCAGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
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| CDS GCA 72 bp | TTGAATATCCTCTCCGCATGGCATCCAGTACACGGCTaGTTCCACTCTGGGCTGGCAGGTGGATCTGCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LNILSAWHPVHG*FHSGLAGGSAY Trigger: GTAAGCAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTACTGGATGCCATGCGGAGAGGATATTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS CCA 72 bp | AGTCCTTCTGAGCTTCTGAGCTCTTCGCCTCTGGACTaGGACAAGGAGTGCTGGACACACTGCTTTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SPSELLSSSPLD*DKECWTHCFVL Trigger: GAGCACAAAGCAGTGTGTCCAGCACTCCTTGTCCCAGTCCAGAGGCGAAGAGCTCAGAAGCTCAGAAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
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| CDS CCA 72 bp | CATGGCATCCAGTACACGGCTGCTTCCACTCTGGGCTaGCAGGTGGATCTGCTTACAGATGTTGTGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HGIQYTAASTLG*QVDLLTDVVSL Trigger: GAGAGACACAACATCTGTAAGCAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTACTGGATGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CAA 72 bp | CTCTGGACTGGGACAAGGAGTGCTGGACACACTGCTTaGTGCTCTGCAGGTCCTAAGCAACACCCAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: LWTGTRSAGHTA*CSAGPKQHPAH Trigger: ATGTGCTGGGTGTTGCTTAGGACCTGCAGAGCACAAAGCAGTGTGTCCAGCACTCCTTGTCCCAGTCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
||
| CDS TCA 72 bp | AATGCTGAAAAGTCGGTCCAGTGGCTAGCCTGGAGCTaGAGTCCTTCTGAGCTTCTGAGCTCTTCGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NAEKSVQWLAWS*SPSELLSSSPL Trigger: CAGAGGCGAAGAGCTCAGAAGCTCAGAAGGACTTCAGCTCCAGGCTAGCCACTGGACCGACTTTTCAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
||
| CDS GCA 72 bp | AGTGGCACTGGGGCTCGTCTGGACTGGCATGATATCTaGGTAGGTCTCATCCAGAGAGAGAAGCACATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGTGARLDWHDI*VGLIQREKHIC Trigger: GCAAATGTGCTTCTCTCTCTGGATGAGACCTACGCAGATATCATGCCAGTCCAGACGAGCCCCAGTGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CCA 72 bp | TACAAAGGCAGAAGTGGCACTGGGGCTCGTCTGGACTaGCATGATATCTGCGTAGGTCTCATCCAGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: YKGRSGTGARLD*HDICVGLIQRE Trigger: CTCTCTCTGGATGAGACCTACGCAGATATCATGCCAGTCCAGACGAGCCCCAGTGCCACTTCTGCCTTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CCA 72 bp | TCCAGTACACGGCTGCTTCCACTCTGGGCTGGCAGGTaGATCTGCTTACAGATGTTGTGTCTCTCACGAATC | + |
|
Preference number: 6 (lower is better) Translates to: SSTRLLPLWAGR*ICLQMLCLSRI Trigger: GATTCGTGAGAGACACAACATCTGTAAGCAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CAA 72 bp | TCTGGACCAGCCAAGAGATCTACCATCTTCTCCCTGTaGAGGATCTCTCCCTTCAGCCTCTCAGCCATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGPAKRSTIFSL*RISPFSLSAMQ Trigger: CTGCATGGCTGAGAGGCTGAAGGGAGAGATCCTCAACAGGGAGAAGATGGTAGATCTCTTGGCTGGTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CAA 72 bp | GGCAGAGGTGATCTTCACCAGCACATAGTCCCCAGGTaGAGCTCTGACCTTGAGCCCAGGGTTAGTGATATC | + |
|
Preference number: 6 (lower is better) Translates to: GRGDLHQHIVPR*SSDLEPRVSDI Trigger: GATATCACTAACCCTGGGCTCAAGGTCAGAGCTCAACCTGGGGACTATGTGCTGGTGAAGATCACCTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CCA 72 bp | ATGCCACATATGCTTCTCTTGAATATCCTCTCCGCATaGCATCCAGTACACGGCTGCTTCCACTCTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MPHMLLLNILSA*HPVHGCFHSGL Trigger: CAGCCCAGAGTGGAAGCAGCCGTGTACTGGATGCCATGCGGAGAGGATATTCAAGAGAAGCATATGTGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS GCA 72 bp | CTCCACCTCTGCGTCAGGGAAAATCACCTTAAGGTTTaGATCATTCCGGCCACAAAGGTCTGTGGTAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: LHLCVRENHLKV*IIPATKVCGRT Trigger: CGTTCTACCACAGACCTTTGTGGCCGGAATGATGCAAACCTTAAGGTGATTTTCCCTGACGCAGAGGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CAA 72 bp | GATAGAACACGTGACAAGAAGGATCACATCAGCCTCTaGGAGGTTGCTGGTCCGAAGGTAGCCACTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DRTRDKKDHISL*EVAGPKVATLL Trigger: CAGAAGAGTGGCTACCTTCGGACCAGCAACCTCCAAGAGGCTGATGTGATCCTTCTTGTCACGTGTTCTATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028990.10 ENSMUST00000109730.3 ENSMUST00000109731.8 |
||
| CDS GCA 72 bp | GACCTTGAGCCCAGGGTTAGTGATATCCTCCACCTCTaGGTCAGGGAAAATCACCTTAAGGTTTGCATCATT | + |
|
Preference number: 6 (lower is better) Translates to: DLEPRVSDILHL*VRENHLKVCII Trigger: AATGATGCAAACCTTAAGGTGATTTTCCCTGACGCAGAGGTGGAGGATATCACTAACCCTGGGCTCAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CAA 90 bp | AACCCTTCAACCAGTACCAGCTGGCTACAACCCACTGAGGTCTTATaGGCTTTTGAAGCTTCTTCTCTGAAGACAGTAATGAGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NPSTSTSWLQPTEVL*AFEASSLKTVMSSS Trigger: GGAGGAACTCATTACTGTCTTCAGAGAAGAAGCTTCAAAAGCCAATAAGACCTCAGTGGGTTGTAGCCAGCTGGTACTGGTTGAAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS TCA 72 bp | TACTGCACTTCTCTAAGTAAAGACACTGTCTGCCGGTaGTCATCCTCTGTCTCTCCACAAAAGCCAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: YCTSLSKDTVCR*SSSVSPQKPVM Trigger: CATCACTGGCTTTTGTGGAGAGACAGAGGATGATCACCGGCAGACAGTGTCTTTACTTAGAGAAGTGCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CCA 72 bp | GTAGAACGTTTGCTGAACCCTTCAACCAGTACCAGCTaGCTACAACCCACTGAGGTCTTATTGGCTTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VERLLNPSTSTS*LQPTEVLLAFE Trigger: TTCAAAAGCCAATAAGACCTCAGTGGGTTGTAGCCAGCTGGTACTGGTTGAAGGGTTCAGCAAACGTTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CAA 72 bp | AACCTGATCCAGAAGGTGAGAAAAACGAAGCCCTCCTaGTTTGGGTTTATAGTTGGTGGTAAAGCCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: NLIQKVRKTKPS*FGFIVGGKATA Trigger: AGCCGTGGCTTTACCACCAACTATAAACCCAAACAAGGAGGGCTTCGTTTTTCTCACCTTCTGGATCAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS TCA 72 bp | GAACCTCATCAGGAAAATCCTTGGGGTGAGGAGAGGTaGATCGGATCCTCATTTCAGGATCGATTCTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EPHQENPWGEER*IGSSFQDRFLK Trigger: TTTCAAGAATCGATCCTGAAATGAGGATCCGATTCACCTCTCCTCACCCCAAGGATTTTCCTGATGAGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CCA 72 bp | CCACGGCTGAGGTTAGCAGACCCTGCATTATTGAACTaGACTTCCGAATTGTCCCGAAAACTATTAACATTC | + |
|
Preference number: 6 (lower is better) Translates to: PRLRLADPALLN*TSELSRKLLTF Trigger: GAATGTTAATAGTTTTCGGGACAATTCGGAAGTCCAGTTCAATAATGCAGGGTCTGCTAACCTCAGCCGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
||
| CDS CAA 72 bp | GTAAAGCCACGGCTGAGGTTAGCAGACCCTGCATTATaGAACTGGACTTCCGAATTGTCCCGAAAACTATTA | + |
|
Preference number: 6 (lower is better) Translates to: VKPRLRLADPAL*NWTSELSRKLL Trigger: TAATAGTTTTCGGGACAATTCGGAAGTCCAGTTCAATAATGCAGGGTCTGCTAACCTCAGCCGTGGCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS CAA 72 bp | ACCAGTACCAGCTGGCTACAACCCACTGAGGTCTTATaGGCTTTTGAAGCTTCTTCTCTGAAGACAGTAATG | + |
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Preference number: 6 (lower is better) Translates to: TSTSWLQPTEVL*AFEASSLKTVM Trigger: CATTACTGTCTTCAGAGAAGAAGCTTCAAAAGCCAATAAGACCTCAGTGGGTTGTAGCCAGCTGGTACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS TCA 72 bp | TGGACTTCCGAATTGTCCCGAAAACTATTAACATTCTaGCCAAGAAGTGTCACTTCTTTTAGGCCCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: WTSELSRKLLTF*PRSVTSFRPCS Trigger: CGAGCAGGGCCTAAAAGAAGTGACACTTCTTGGTCAGAATGTTAATAGTTTTCGGGACAATTCGGAAGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS GCA 72 bp | CCTTCAGCCTGTGATATGCTCGTGTCTTTTGCCTCATaGTGTATGCAAAGAGAAAACCGGTATTATACTGCA | + |
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Preference number: 6 (lower is better) Translates to: PSACDMLVSFAS*CMQRENRYYTA Trigger: TGCAGTATAATACCGGTTTTCTCTTTGCATACAGCATGAGGCAAAAGACACGAGCATATCACAGGCTGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS GCA 72 bp | TACTTCTTCTGGAACATCATCCTTCAGCCTGTGATATaGTCGTGTCTTTTGCCTCATGCTGTATGCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: YFFWNIILQPVI*SCLLPHAVCKE Trigger: CTCTTTGCATACAGCATGAGGCAAAAGACACGAGCATATCACAGGCTGAAGGATGATGTTCCAGAAGAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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| CDS CAA 72 bp | AACATCATCCTTCAGCCTGTGATATGCTCGTGTCTTTaGCCTCATGCTGTATGCAAAGAGAAAACCGGTATT | + |
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Preference number: 6 (lower is better) Translates to: NIILQPVICSCL*PHAVCKEKTGI Trigger: AATACCGGTTTTCTCTTTGCATACAGCATGAGGCAAAAGACACGAGCATATCACAGGCTGAAGGATGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028990.10 ENSMUST00000109731.8 |
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