Pregenerated sensors for CDK5R2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090071Ensembl transcript IDs: ENSMUST00000160379.4
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACGGACAGACAGATAGTGCGGCCTGCGCCGTCGGCCCGCATCATTaGCACCTTGGACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACT | + |
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Preference number: 1 (lower is better) Translates to: DGQTDSAACAVGPHH*HLGQGPRPDPVPGT Trigger: AGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTCCAAGGTGCCAATGATGCGGGCCGACGGCGCAGGCCGCACTATCTGTCTGTCCGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 90 bp | GCATCATTGGCACCTTGGACAAGGCCCCAGGCCCGACCCAGTCCCTaGTACTCTTCCCAGGACGATTCCGGTCCCGCCCAGCTCAGCACC | + |
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Preference number: 1 (lower is better) Translates to: ASLAPWTRPQARPSP*YSSQDDSGPAQLST Trigger: GGTGCTGAGCTGGGCGGGACCGGAATCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTCCAAGGTGCCAATGATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR GCA 90 bp | ACCGGAGGAAGGAAGAGGAACAAGAAGGGTACACGGAAACATAGGTaGTGGAGAAGCGGGGACCGCAGTGGGGTACCATCAGGCTCGGGG | + |
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Preference number: 1 (lower is better) Translates to: TGGRKRNKKGTRKHR*WRSGDRSGVPSGSG Trigger: CCCCGAGCCTGATGGTACCCCACTGCGGTCCCCGCTTCTCCAGCACCTATGTTTCCGTGTACCCTTCTTGTTCCTCTTCCTTCCTCCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 90 bp | AGCCCTTTCCTCCTCAACTCCCAGCATGCAACACGTTGGAAAAGGTaGGGAGAGGCCGTGGGGGTGAAGGAAAGGATCACCCTGATCTTT | + |
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Preference number: 1 (lower is better) Translates to: SPFLLNSQHATRWKR*GEAVGVKERITLIF Trigger: AAAGATCAGGGTGATCCTTTCCTTCACCCCCACGGCCTCTCCCCACCTTTTCCAACGTGTTGCATGCTGGGAGTTGAGGAGGAAAGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 90 bp | CCACAGAGAAGACACCACCGCTGCAAGCGGGGTAGTCTACCAGGTTaGATCTTGCCCTCAAATCTCAGCCTCCTAAATGAAGGCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PQRRHHRCKRGSLPG*ILPSNLSLLNEGSS Trigger: GCTGCTGCCTTCATTTAGGAGGCTGAGATTTGAGGGCAAGATCCAACCTGGTAGACTACCCCGCTTGCAGCGGTGGTGTCTTCTCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 90 bp | GGAGAGGCCGTGGGGGTGAAGGAAAGGATCACCCTGATCTTTGCCTaGACAACTGAGACTGCAGTTTCCTGTCCAGTCTATCCAAATTTA | + |
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Preference number: 1 (lower is better) Translates to: GEAVGVKERITLIFA*TTETAVSCPVYPNL Trigger: TAAATTTGGATAGACTGGACAGGAAACTGCAGTCTCAGTTGTCCAGGCAAAGATCAGGGTGATCCTTTCCTTCACCCCCACGGCCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR GCA 90 bp | AGTTTTCTTTCTCTTTCTATCCATCCACAGAGAAGACACCACCGCTaGAAGCGGGGTAGTCTACCAGGTTGGATCTTGCCCTCAAATCTC | + |
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Preference number: 1 (lower is better) Translates to: SFLSLSIHPQRRHHR*KRGSLPGWILPSNL Trigger: GAGATTTGAGGGCAAGATCCAACCTGGTAGACTACCCCGCTTGCAGCGGTGGTGTCTTCTCTGTGGATGGATAGAAAGAGAAAGAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 90 bp | ACAAGATGGAGGCCGGAATTGGGAGGTAAGTTCAGCCTCAACCCTTaGCTTATGATGCTTTACTGTAAAATGAAAGCCAGTGTGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TRWRPELGGKFSLNP*LMMLYCKMKASVGR Trigger: CCTGCCCACACTGGCTTTCATTTTACAGTAAAGCATCATAAGCCAAGGGTTGAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 90 bp | TCCTTAAGTAGCCTGAGTATTAATAAGGAGGTAGGGCAGACAAGATaGAGGCCGGAATTGGGAGGTAAGTTCAGCCTCAACCCTTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: SLSSLSINKEVGQTR*RPELGGKFSLNPWL Trigger: AAGCCAAGGGTTGAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTTATTAATACTCAGGCTACTTAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CAA 90 bp | AGACAGATAGTGCGGCCTGCGCCGTCGGCCCGCATCATTGGCACCTaGGACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACTCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RQIVRPAPSARIIGT*DKAPGPTQSLVLFP Trigger: TGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTCCAAGGTGCCAATGATGCGGGCCGACGGCGCAGGCCGCACTATCTGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR CCA 90 bp | ACGGACAGACAGATAGTGCGGCCTGCGCCGTCGGCCCGCATCATTGGCACCTTGAGACACCGCGGCCTCTaGCGTCCTAGCCTCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: TDRQIVRPAPSARIIGTLRHRGL*RPSLHL Trigger: AAGGTGGAGGCTAGGACGCCAGAGGCCGCGGTGTCT...CAAGGTGCCAATGATGCGGGCCGACGGCGCAGGCCGCACTATCTGTCTGTCCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR CCA 90 bp | GACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACTCTTCCCAGGACGATTCCGGACACGTTGGAAAAGGTaGGGAGAGGCCGTGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: DKAPGPTQSLVLFPGRFRTRWKR*GEAVGV Trigger: CACCCCCACGGCCTCTCCCCACCTTTTCCAACGTGT...CCGGAATCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGTAGGGCAGACAAGATGGAGGCCGGAATTGGGAGGTAAGTTCAGCCTCCCTCGGACAATTCCCTaGCCAGCCCCCTCCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: KEVGQTRWRPELGGKFSLPRTIP*PAPSPP Trigger: GGGTGGGGAGGGGGCTGGGCAGGGAATTGTCCGAGG...GAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTCCCAGGACGATTCCGGTCCCGCCCAGCTCAGCACCTCGGACAATTCCCAGAAAGGTGAGGGACTaGACAAAACCCAGGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: TLPRTIPVPPSSAPRTIPRKVRD*TKPRVV Trigger: CACCACCCTGGGTTTTGTCCAGTCCCTCACCTTTCT...GGGAATTGTCCGAGGTGCTGAGCTGGGCGGGACCGGAATCGTCCTGGGAAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR TCA 90 bp | TCCTCAACTCCCAGCATGCAACACGTTGGAAAAGGTGGGGAGAGGCCGTGGGGGCTTTGCCTGGACAACTaGGACTGCAGTTTCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SSTPSMQHVGKGGERPWGLCLDN*DCSFLS Trigger: GGACAGGAAACTGCAGTCTCAGTTGTCCAGGCAAAG...CCCCCACGGCCTCTCCCCACCTTTTCCAACGTGTTGCATGCTGGGAGTTGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTCCCAGGACGATTCCGGTCCCGCCCAGCTCAGCACCTCGGACAATTCCCTACCAGGTTGGATCTTaGCCTCAAATCTCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: TLPRTIPVPPSSAPRTIPYQVGS*PQISAS Trigger: GGAGGCTGAGATTTGAGGGCAAGATCCAACCTGGTA...GGGAATTGTCCGAGGTGCTGAGCTGGGCGGGACCGGAATCGTCCTGGGAAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR TCA 90 bp | CCGGAATTGGGAGGTAAGTTCAGCCTCAACCCTTGGCTTATGATGCTTTACTGTATAGCGACGGTGGCTTaGTGGTCCCGGGGTTTCCGG | + |
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Preference number: 2 (lower is better) Translates to: PELGGKFSLNPWLMMLYCIATVA*WSRGFR Trigger: CCGGAAACCCCGGGACCATCAAGCCACCGTCGCTAT...ACAGTAAAGCATCATAAGCCAAGGGTTGAGGCTGAACTTACCTCCCAATTCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR CCA 90 bp | ACCTCACAGAAAGGGAGACTTCTGTCTCTTTATCATTTGTCCTTAAGTAGCCTGCCCAGGGAATGCCAATaGACAGGCGGGGGCGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: TSQKGRLLSLYHLSLSSLPRECQ*TGGGGG Trigger: GCCCCCGCCCCCGCCTGTCCATTGGCATTCCCTGGG...CAGGCTACTTAAGGACAAATGATAAAGAGACAGAAGTCTCCCTTTCTGTGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTTGGATCTTGCCCTCAAATCTCAGCCTCCTAAATGAAGGCAGCAGCCCTCAGCATGCAACACGTTaGAAAAGGTGGGGAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PGWILPSNLSLLNEGSSPQHATR*KRWGEA Trigger: GGCCTCTCCCCACCTTTTCCAACGTGTTGCATGCTG...AGGGCTGCTGCCTTCATTTAGGAGGCTGAGATTTGAGGGCAAGATCCAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGTAGGGCAGACAAGATGGAGGCCGGAATTGGGAGGTAAGTTCAGCCTCCCTCAACTCCCAGCATaGAACACGTTGGAAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: KEVGQTRWRPELGGKFSLPQLPA*NTLEKV Trigger: CACCTTTTCCAACGTGTTGCATGCTGGGAGTTGAGG...GAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR CCA 90 bp | CCGGAATTGGGAGGTAAGTTCAGCCTCAACCCTTGGCTTATGATGCTTTACTGTGCATCATTGGCACCTTaGACAAGGCCCCAGGCCCGA | + |
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Preference number: 2 (lower is better) Translates to: PELGGKFSLNPWLMMLYCASLAP*TRPQAR Trigger: TCGGGCCTGGGGCCTTGTCCAAGGTGCCAATGATGC...ACAGTAAAGCATCATAAGCCAAGGGTTGAGGCTGAACTTACCTCCCAATTCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGAGTATTAATAAGGAGGTAGGGCAGACAAGATGGAGGCCGGAATTGGGAGCAGAAATGGAAAGATaGAGGCGCAGACAGACGGAA | + |
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Preference number: 2 (lower is better) Translates to: SLSINKEVGQTRWRPELGAEMER*RRRQTE Trigger: TTCCGTCTGTCTGCGCCTCCATCTTTCCATTTCTGC...TCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTTATTAATACTCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR TCA 90 bp | CCGGAATTGGGAGGTAAGTTCAGCCTCAACCCTTGGCTTATGATGCTTTACTGTGAAGACACAGAAAGGTaGGGGACTGGACAAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: PELGGKFSLNPWLMMLYCEDTER*GTGQNP Trigger: TGGGTTTTGTCCAGTCCCTCACCTTTCTGTGTCTTC...ACAGTAAAGCATCATAAGCCAAGGGTTGAGGCTGAACTTACCTCCCAATTCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CAA 90 bp | CTGAGTATTAATAAGGAGGTAGGGCAGACAAGATGGAGGCCGGAATaGGGAGGTAAGTTCAGCCTCAACCCTTGGCTTATGATGCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: LSINKEVGQTRWRPE*GGKFSLNPWLMMLY Trigger: GTAAAGCATCATAAGCCAAGGGTTGAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTTATTAATACTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR-3UTR TCA 90 bp | ACCTCACAGAAAGGGAGACTTCTGTCTCTTTATCATTTGTCCTTAAGTAGCCTGCAGGGTGGTGGACTTTaGGATGCCCACAGCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TSQKGRLLSLYHLSLSSLQGGGL*DAHSRK Trigger: TTTCCTGCTGTGGGCATCTCAAAGTCCACCACCCTG...CAGGCTACTTAAGGACAAATGATAAAGAGACAGAAGTCTCCCTTTCTGTGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 72 bp | TGCGGCCTGCGCCGTCGGCCCGCATCATTGGCACCTTaGACAAGGCCCCAGGCCCGACCCAGTCCCTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: CGLRRRPASLAP*TRPQARPSPWY Trigger: GTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTCCAAGGTGCCAATGATGCGGGCCGACGGCGCAGGCCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 72 bp | GCACCTTGGACAAGGCCCCAGGCCCGACCCAGTCCCTaGTACTCTTCCCAGGACGATTCCGGTCCCGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: APWTRPQARPSP*YSSQDDSGPAQ Trigger: CTGGGCGGGACCGGAATCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTCCAAGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR TCA 72 bp | CCTGGGCATAGAGCAGCGGTAATAGCGACGGTGGCTTaGTGGTCCCGGGGTTTCCGGGTGTGTGTGAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: PGHRAAVIATVA*WSRGFRVCVRG Trigger: GCCCCTCACACACACCCGGAAACCCCGGGACCATCAAGCCACCGTCGCTATTACCGCTGCTCTATGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR GCA 72 bp | CGCTCCAGGACAGACGGACAGACAGATAGTGCGGCCTaGGCCGTCGGCCCGCATCATTGGCACCTTGGACAA | + |
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Preference number: 3 (lower is better) Translates to: RSRTDGQTDSAA*AVGPHHWHLGQ Trigger: TTGTCCAAGGTGCCAATGATGCGGGCCGACGGCGCAGGCCGCACTATCTGTCTGTCCGTCTGTCCTGGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR TCA 72 bp | AAATGGAAAGATGGAGGCGCAGACAGACGGAAAGGGTaGACGAAGTTGGGGGTGCACTTCCCGCGATCATCC | + |
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Preference number: 3 (lower is better) Translates to: KWKDGGADRRKG*TKLGVHFPRSS Trigger: GGATGATCGCGGGAAGTGCACCCCCAACTTCGTTCACCCTTTCCGTCTGTCTGCGCCTCCATCTTTCCATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR GCA 72 bp | TCTCTTTCTATCCATCCACAGAGAAGACACCACCGCTaGAAGCGGGGTAGTCTACCAGGTTGGATCTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: SLSIHPQRRHHR*KRGSLPGWILP Trigger: GGGCAAGATCCAACCTGGTAGACTACCCCGCTTGCAGCGGTGGTGTCTTCTCTGTGGATGGATAGAAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 72 bp | CAGGAGGTAAGACGAAGACACAGAAAGGTGAGGGACTaGACAAAACCCAGGGTGGTGGACTTTGAGATGCCC | + |
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Preference number: 3 (lower is better) Translates to: QEVRRRHRKVRD*TKPRVVDFEMP Trigger: GGGCATCTCAAAGTCCACCACCCTGGGTTTTGTCCAGTCCCTCACCTTTCTGTGTCTTCGTCTTACCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 72 bp | AGACACCACCGCTGCAAGCGGGGTAGTCTACCAGGTTaGATCTTGCCCTCAAATCTCAGCCTCCTAAATGAA | + |
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Preference number: 3 (lower is better) Translates to: RHHRCKRGSLPG*ILPSNLSLLNE Trigger: TTCATTTAGGAGGCTGAGATTTGAGGGCAAGATCCAACCTGGTAGACTACCCCGCTTGCAGCGGTGGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 72 bp | AGCCTGAGTATTAATAAGGAGGTAGGGCAGACAAGATaGAGGCCGGAATTGGGAGGTAAGTTCAGCCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: SLSINKEVGQTR*RPELGGKFSLN Trigger: GTTGAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTTATTAATACTCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CCA 72 bp | AGGCCGGAATTGGGAGGTAAGTTCAGCCTCAACCCTTaGCTTATGATGCTTTACTGTAAAATGAAAGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: RPELGGKFSLNP*LMMLYCKMKAS Trigger: ACTGGCTTTCATTTTACAGTAAAGCATCATAAGCCAAGGGTTGAGGCTGAACTTACCTCCCAATTCCGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CAA 72 bp | GTGCGGCCTGCGCCGTCGGCCCGCATCATTGGCACCTaGGACAAGGCCCCAGGCCCGACCCAGTCCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: VRPAPSARIIGT*DKAPGPTQSLV Trigger: TACCAGGGACTGGGTCGGGCCTGGGGCCTTGTCCAAGGTGCCAATGATGCGGGCCGACGGCGCAGGCCGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR TCA 90 bp | ACCTTGGACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACTCTTCCCAGGACGACGGCTTTCCCCCGCCTaGGCCTGGTGGAGGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TLDKAPGPTQSLVLFPGRRLSPA*AWWRGG Trigger: GCCGCCCCTCCACCAGGCTCAGGCGGGGGAAAGCCG...TCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTCCAAGGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CCA 90 bp | GACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACTCTTCCCAGGACGATTCCGGGCACGGCCAGGGGCTTaGCTGTTCCGCCACCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: DKAPGPTQSLVLFPGRFRARPGA*LFRHRR Trigger: CCGACGGTGGCGGAACAGCCAAGCCCCTGGCCGTGC...CCGGAATCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CCA 90 bp | ACGGACAGACAGATAGTGCGGCCTGCGCCGTCGGCCCGCATCATTGGCACCTTGACGGGGGCTCGCAGGTaGCAGCGGTCGTGGGCACCG | + |
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Preference number: 4 (lower is better) Translates to: TDRQIVRPAPSARIIGTLTGARR*QRSWAP Trigger: CGGTGCCCACGACCGCTGCCACCTGCGAGCCCCCGT...CAAGGTGCCAATGATGCGGGCCGACGGCGCAGGCCGCACTATCTGTCTGTCCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CCA 90 bp | ACCTTGGACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACTCTTCCCAGGACGATGCGGGCTGAGCCGCTaGATGAGGCGCAGGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: TLDKAPGPTQSLVLFPGRCGLSR*MRRRQR Trigger: GCGCTGCCTGCGCCTCATCCAGCGGCTCAGCCCGCA...TCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTCCAAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR TCA 90 bp | ACGGACAGACAGATAGTGCGGCCTGCGCCGTCGGCCCGCATCATTGGCACCTTGAGTGGGGGTCGGCGTTaGGTCGCAGCATCTGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: TDRQIVRPAPSARIIGTLSGGRR*VAASAG Trigger: GCCCGCAGATGCTGCGACTCAACGCCGACCCCCACT...CAAGGTGCCAATGATGCGGGCCGACGGCGCAGGCCGCACTATCTGTCTGTCCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR GCA 90 bp | ACGGACAGACAGATAGTGCGGCCTGCGCCGTCGGCCCGCATCATTGGCACCTTGGGCCGTCGCGGCCCTTaGGGAGAAGGTTCTCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: TDRQIVRPAPSARIIGTLGRRGP*GEGSRG Trigger: ACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCC...CAAGGTGCCAATGATGCGGGCCGACGGCGCAGGCCGCACTATCTGTCTGTCCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR GCA 90 bp | GACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACTCTTCCCAGGACGATTCCGGAGGCGCAGGCAGCGCTaGCAGAAGCGCTCCTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: DKAPGPTQSLVLFPGRFRRRRQR*QKRSLS Trigger: CGACAAGGAGCGCTTCTGGCAGCGCTGCCTGCGCCT...CCGGAATCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CCA 90 bp | ACTCTTCCCAGGACGATTCCGGTCCCGCCCAGCTCAGCACCTCGGACAATTCCCTCGCGGTTGCGTTGCTaGACCAGAGGGTCGGGACCG | + |
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Preference number: 4 (lower is better) Translates to: TLPRTIPVPPSSAPRTIPSRLRC*TRGSGP Trigger: CGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGA...GGGAATTGTCCGAGGTGCTGAGCTGGGCGGGACCGGAATCGTCCTGGGAAGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CCA 90 bp | GACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACTCTTCCCAGGACGATTCCGGACTTGCGTGAAGAAGTaGGGGTCGGCGTTGAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: DKAPGPTQSLVLFPGRFRTCVKK*GSALSR Trigger: GCGACTCAACGCCGACCCCCACTTCTTCACGCAAGT...CCGGAATCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR TCA 90 bp | AAGGAGGTAGGGCAGACAAGATGGAGGCCGGAATTGGGAGGTAAGTTCAGCCTCCGGGGCTCAGCTCCTTaGGGCGGTAGCAGCGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: KEVGQTRWRPELGGKFSLRGSAP*GGSSVG Trigger: GCCGACGCTGCTACCGCCTCAAGGAGCTGAGCCCCG...GAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR TCA 90 bp | GACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACTCTTCCCAGGACGATTCCGGCTTGAAAGACTTGCGTaGAGAAGTGGGGGTCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: DKAPGPTQSLVLFPGRFRLERLA*RSGGRR Trigger: ACGCCGACCCCCACTTCTTCACGCAAGTCTTTCAAG...CCGGAATCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR GCA 90 bp | AAGGAGGTAGGGCAGACAAGATGGAGGCCGGAATTGGGAGGTAAGTTCAGCCTCTCGCCGGTAGACGCCTaGACGATGACCCGCCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: KEVGQTRWRPELGGKFSLSPVDA*TMTRRG Trigger: GCCGCGGCGGGTCATCGTGCAGGCGTCTACCGGCGA...GAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CCA 90 bp | GCTCGGGGTAAGGTAGAAAAGGGTAAAGCCCAGGGAATGCCAATGGACAGGCGGTCGCGCAGCTGTCCCTaGCGCTCGAGGAGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARGKVEKGKAQGMPMDRRSRSCP*RSRRRW Trigger: CCACCTCCTCCTCGAGCGCCAGGGACAGCTGCGCGA...CCGCCTGTCCATTGGCATTCCCTGGGCTTTACCCTTTTCTACCTTACCCCGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR TCA 90 bp | GTAGGGCAGACAAGATGGAGGCCGGAATTGGGAGGTAAGTTCAGCCTCAACCCTGCACGGACGGCCGTTTaGGCCGGCTCTCGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGQTRWRPELGGKFSLNPARTAV*AGSRLC Trigger: GCAAAGGCGAGAGCCGGCTCAAACGGCCGTCCGTGC...AGGGTTGAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR TCA 90 bp | ACGGACAGACAGATAGTGCGGCCTGCGCCGTCGGCCCGCATCATTGGCACCTTGCCTCGCCCTCGTTCTTaGGGTCTTGAAAGACTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TDRQIVRPAPSARIIGTLPRPRS*GLERLA Trigger: CGCAAGTCTTTCAAGACCTCAAGAACGAGGGCGAGG...CAAGGTGCCAATGATGCGGGCCGACGGCGCAGGCCGCACTATCTGTCTGTCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR GCA 90 bp | ACTCTTCCCAGGACGATTCCGGTCCCGCCCAGCTCAGCACCTCGGACAATTCCCGAAGGTTCTCGCGGTTaGGTTGCTGGACCAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLPRTIPVPPSSAPRTIPEGSRG*VAGPEG Trigger: ACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTC...GGGAATTGTCCGAGGTGCTGAGCTGGGCGGGACCGGAATCGTCCTGGGAAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CCA 90 bp | AGGGACTGGACAAAACCCAGGGTGGTGGACTTTGAGATGCCCACAGCAGGAAAGTCGAGGAGGAGGTGGTaGACGCGCTGCTTCCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RDWTKPRVVDFEMPTAGKSRRRW*TRCFRS Trigger: CGAGCGGAAGCAGCGCGTCCACCACCTCCTCCTCGA...CTTTCCTGCTGTGGGCATCTCAAAGTCCACCACCCTGGGTTTTGTCCAGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR GCA 90 bp | AGCCTGAGTATTAATAAGGAGGTAGGGCAGACAAGATGGAGGCCGGAATTGGGAGTGAGGAAGGCGGCCTaGAGTTCCGCGGCCGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSINKEVGQTRWRPELGVRKAA*SSAADA Trigger: GGCGTCGGCCGCGGAACTGCAGGCCGCCTTCCTCAC...TCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTTATTAATACTCAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR GCA 90 bp | AAGGAGGTAGGGCAGACAAGATGGAGGCCGGAATTGGGAGGTAAGTTCAGCCTCTTGAGTCGCAGCATCTaGGGGCTGAGCCGCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KEVGQTRWRPELGGKFSLLSRSI*GLSRWM Trigger: CATCCAGCGGCTCAGCCCGCAGATGCTGCGACTCAA...GAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CCA 90 bp | CCGGAATTGGGAGGTAAGTTCAGCCTCAACCCTTGGCTTATGATGCTTTACTGTAGGTGGCAGCGGTCGTaGGCACCGTGGGCACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PELGGKFSLNPWLMMLYCRWQRS*APWAPA Trigger: TGCCGGTGCCCACGGTGCCCACGACCGCTGCCACCT...ACAGTAAAGCATCATAAGCCAAGGGTTGAGGCTGAACTTACCTCCCAATTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CCA 90 bp | AGCCTGAGTATTAATAAGGAGGTAGGGCAGACAAGATGGAGGCCGGAATTGGGACGCTCGAGGAGGAGGTaGTGGACGCGCTGCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSINKEVGQTRWRPELGRSRRR*WTRCFR Trigger: GCGGAAGCAGCGCGTCCACCACCTCCTCCTCGAGCG...TCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTTATTAATACTCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR GCA 90 bp | GGGGGCTGCAGACAGGAGGTAAGACGAAGACACAGAAAGGTGAGGGACTGGACAAAGTTCATAGTCCAGTaGTTGGCTCCGGTCGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGCRQEVRRRHRKVRDWTKFIVQ*LAPVAQ Trigger: CTGCGCGACCGGAGCCAAGCACTGGACTATGAACTT...TGTCCAGTCCCTCACCTTTCTGTGTCTTCGTCTTACCTCCTGTCTGCAGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR GCA 90 bp | CTGACTTTCCCTCCTACCCTACCCCTAACAGTTTCACTCCTACGCCCATTCCTTTTCTCGCGGTTGCGTTaGTGGACCAGAGGGTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTFPPTLPLTVSLLRPFLFSRLR*WTRGSG Trigger: TCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAA...AAGGAATGGGCGTAGGAGTGAAACTGTTAGGGGTAGGGTAGGAGGGAAAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR GCA 90 bp | AGGGACTGGACAAAACCCAGGGTGGTGGACTTTGAGATGCCCACAGCAGGAAAGGCGTCACCTTTTTGCTaGCTTTCTTCTTCTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RDWTKPRVVDFEMPTAGKASPFC*LSSSWP Trigger: CGGCCAAGAAGAAGAAAGGCAGCAAAAAGGTGACGC...CTTTCCTGCTGTGGGCATCTCAAAGTCCACCACCCTGGGTTTTGTCCAGTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR TCA 90 bp | GCTCGGGGTAAGGTAGAAAAGGGTAAAGCCCAGGGAATGCCAATGGACAGGCGGTCGTTCTTGAGGTCTTaGAAGACTTGCGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARGKVEKGKAQGMPMDRRSFLRS*KTCVKK Trigger: CTTCTTCACGCAAGTCTTTCAAGACCTCAAGAACGA...CCGCCTGTCCATTGGCATTCCCTGGGCTTTACCCTTTTCTACCTTACCCCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR GCA 90 bp | CCAGGTTGGATCTTGCCCTCAAATCTCAGCCTCCTAAATGAAGGCAGCAGCCCTTGGGCGTCACCTTTTTaGTGCCTTTCTTCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGWILPSNLSLLNEGSSPWASPF*CLSSSW Trigger: CCAAGAAGAAGAAAGGCAGCAAAAAGGTGACGCCCA...AGGGCTGCTGCCTTCATTTAGGAGGCTGAGATTTGAGGGCAAGATCCAACCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| 3UTR CAA 72 bp | AATAAGGAGGTAGGGCAGACAAGATGGAGGCCGGAATaGGGAGGTAAGTTCAGCCTCAACCCTTGGCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: NKEVGQTRWRPE*GGKFSLNPWLM Trigger: CATAAGCCAAGGGTTGAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTACCTCCTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 90 bp | TCGCGCAGCTGTCCCTGGCGCTCGAGGAGGAGGTGGTGGACGCGCTaGTTCCGCTCGGTGGACCCCCGGTGCTCGCCGCGGCCTCGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSCPWRSRRRWWTR*FRSVDPRCSPRPRP Trigger: AGGGCGAGGCCGCGGCGAGCACCGGGGGTCCACCGAGCGGAAGCAGCGCGTCCACCACCTCCTCCTCGAGCGCCAGGGACAGCTGCGCGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 90 bp | TGGCAGCGGTCGTGGGCACCGTGGGCACCGGCACGGCCAGGGGCTTaGCTGTTCCGCCACCGTCGGGGCCGTCGCGGCCCTTGCGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WQRSWAPWAPARPGA*LFRHRRGRRGPCGE Trigger: TTCTCCGCAAGGGCCGCGACGGCCCCGACGGTGGCGGAACAGCCAAGCCCCTGGCCGTGCCGGTGCCCACGGTGCCCACGACCGCTGCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 90 bp | GCTTGGCTCCGGTCGCGCAGCTGTCCCTGGCGCTCGAGGAGGAGGTaGTGGACGCGCTGCTTCCGCTCGGTGGACCCCCGGTGCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AWLRSRSCPWRSRRR*WTRCFRSVDPRCSP Trigger: CGGCGAGCACCGGGGGTCCACCGAGCGGAAGCAGCGCGTCCACCACCTCCTCCTCGAGCGCCAGGGACAGCTGCGCGACCGGAGCCAAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 90 bp | CCTGGCGCTCGAGGAGGAGGTGGTGGACGCGCTGCTTCCGCTCGGTaGACCCCCGGTGCTCGCCGCGGCCTCGCCCTCGTTCTTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGARGGGGGRAASAR*TPGARRGLALVLEV Trigger: GACCTCAAGAACGAGGGCGAGGCCGCGGCGAGCACCGGGGGTCCACCGAGCGGAAGCAGCGCGTCCACCACCTCCTCCTCGAGCGCCAGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS TCA 90 bp | CCACGCCGCGGAACCAGCCCACCAGCTCGCCGGGGCTCAGCTCCTTaGGGCGGTAGCAGCGTCGGCACACGAAGTCGCCGAGGCAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRRGTSPPARRGSAP*GGSSVGTRSRRGSG Trigger: TCCGCTGCCTCGGCGACTTCGTGTGCCGACGCTGCTACCGCCTCAAGGAGCTGAGCCCCGGCGAGCTGGTGGGCTGGTTCCGCGGCGTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 90 bp | TCGGGGCCGTCGCGGCCCTTGCGGAGAAGGTTCTCGCGGTTGCGTTaGTGGACCAGAGGGTCGGGACCGGTGGACGCTGGCTTGGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SGPSRPLRRRFSRLR*WTRGSGPVDAGLGV Trigger: GACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCCCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 90 bp | CACCGTCGGGGCCGTCGCGGCCCTTGCGGAGAAGGTTCTCGCGGTTaGGTTGCTGGACCAGAGGGTCGGGACCGGTGGACGCTGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HRRGRRGPCGEGSRG*VAGPEGRDRWTLAW Trigger: CCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCCCGACGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 90 bp | CCAGGGGCTTGGCTGTTCCGCCACCGTCGGGGCCGTCGCGGCCCTTaGGGAGAAGGTTCTCGCGGTTGCGTTGCTGGACCAGAGGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGAWLFRHRRGRRGP*GEGSRGCVAGPEGR Trigger: CCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCCCGACGGTGGCGGAACAGCCAAGCCCCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 90 bp | GGGCCGTCGCGGCCCTTGCGGAGAAGGTTCTCGCGGTTGCGTTGCTaGACCAGAGGGTCGGGACCGGTGGACGCTGGCTTGGGCGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GPSRPLRRRFSRLRC*TRGSGPVDAGLGVT Trigger: GGTGACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 90 bp | CGCAGCATCTGCGGGCTGAGCCGCTGGATGAGGCGCAGGCAGCGCTaGCAGAAGCGCTCCTTGTCGGGCTCCACGAGGAACGGCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSICGLSRWMRRRQR*QKRSLSGSTRNGLS Trigger: GCTCAAGCCGTTCCTCGTGGAGCCCGACAAGGAGCGCTTCTGGCAGCGCTGCCTGCGCCTCATCCAGCGGCTCAGCCCGCAGATGCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 90 bp | AAGTGGGGGTCGGCGTTGAGTCGCAGCATCTGCGGGCTGAGCCGCTaGATGAGGCGCAGGCAGCGCTGCCAGAAGCGCTCCTTGTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KWGSALSRSICGLSR*MRRRQRCQKRSLSG Trigger: GCCCGACAAGGAGCGCTTCTGGCAGCGCTGCCTGCGCCTCATCCAGCGGCTCAGCCCGCAGATGCTGCGACTCAACGCCGACCCCCACTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | GACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACTCTTCCCAGGACGATTCCGGAGCACGGACGGCCGTTaGAGCCGGCTCTCGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DKAPGPTQSLVLFPGRFRSTDGR*SRLSPL Trigger: CAAAGGCGAGAGCCGGCTCAAACGGCCGTCCGTGCT...CCGGAATCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS TCA 90 bp | GGACCCCCGGTGCTCGCCGCGGCCTCGCCCTCGTTCTTGAGGTCTTaGAAGACTTGCGTGAAGAAGTGGGGGTCGGCGTTGAGTCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPPVLAAASPSFLRS*KTCVKKWGSALSRS Trigger: GCTGCGACTCAACGCCGACCCCCACTTCTTCACGCAAGTCTTTCAAGACCTCAAGAACGAGGGCGAGGCCGCGGCGAGCACCGGGGGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | GCTCGGGGTAAGGTAGAAAAGGGTAAAGCCCAGGGAATGCCAATGGACAGGCGGAGCCGGCTCTCGCCTTaGCCGCCCTTGCCGGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARGKVEKGKAQGMPMDRRSRLSP*PPLPAG Trigger: GCCGGCCGGCAAGGGCGGCAAAGGCGAGAGCCGGCT...CCGCCTGTCCATTGGCATTCCCTGGGCTTTACCCTTTTCTACCTTACCCCGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | ACCTTGGACAAGGCCCCAGGCCCGACCCAGTCCCTGGTACTCTTCCCAGGACGAAAGTGGGGGTCGGCGTaGAGTCGCAGCATCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLDKAPGPTQSLVLFPGRKWGSA*SRSICG Trigger: CCCGCAGATGCTGCGACTCAACGCCGACCCCCACTT...TCGTCCTGGGAAGAGTACCAGGGACTGGGTCGGGCCTGGGGCCTTGTCCAAGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 90 bp | AAGACTTGCGTGAAGAAGTGGGGGTCGGCGTTGAGTCGCAGCATCTaGGGGCTGAGCCGCTGGATGAGGCGCAGGCAGCGCTGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KTCVKKWGSALSRSI*GLSRWMRRRQRCQK Trigger: CTTCTGGCAGCGCTGCCTGCGCCTCATCCAGCGGCTCAGCCCGCAGATGCTGCGACTCAACGCCGACCCCCACTTCTTCACGCAAGTCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | ACTCTTCCCAGGACGATTCCGGTCCCGCCCAGCTCAGCACCTCGGACAATTCCCGTTCTCGCGGTTGCGTaGCTGGACCAGAGGGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLPRTIPVPPSSAPRTIPVLAVA*LDQRVG Trigger: CCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAAC...GGGAATTGTCCGAGGTGCTGAGCTGGGCGGGACCGGAATCGTCCTGGGAAGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | AGGGACTGGACAAAACCCAGGGTGGTGGACTTTGAGATGCCCACAGCAGGAAAGGGGCCGTCGCGGCCCTaGCGGAGAAGGTTCTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RDWTKPRVVDFEMPTAGKGPSRP*RRRFSR Trigger: CCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCC...CTTTCCTGCTGTGGGCATCTCAAAGTCCACCACCCTGGGTTTTGTCCAGTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 90 bp | GGTTGCGTTGCTGGACCAGAGGGTCGGGACCGGTGGACGCTGGCTTaGGCGTCACCTTTTTGCTGCCTTTCTTCTTCTTGGCCGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCVAGPEGRDRWTLA*ASPFCCLSSSWPRL Trigger: CAGCCTCGGCCAAGAAGAAGAAAGGCAGCAAAAAGGTGACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 90 bp | CTCGCGGTTGCGTTGCTGGACCAGAGGGTCGGGACCGGTGGACGCTaGCTTGGGCGTCACCTTTTTGCTGCCTTTCTTCTTCTTGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LAVALLDQRVGTGGR*LGRHLFAAFLLLGR Trigger: TCGGCCAAGAAGAAGAAAGGCAGCAAAAAGGTGACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | ACTCTTCCCAGGACGATTCCGGTCCCGCCCAGCTCAGCACCTCGGACAATTCCCTACACGAACACCAGGTaGGCGGGGGTAATGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLPRTIPVPPSSAPRTIPYTNTR*AGVMKA Trigger: GGCCTTCATTACCCCCGCCAACCTGGTGTTCGTGTA...GGGAATTGTCCGAGGTGCTGAGCTGGGCGGGACCGGAATCGTCCTGGGAAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 90 bp | GAAGGTTCTCGCGGTTGCGTTGCTGGACCAGAGGGTCGGGACCGGTaGACGCTGGCTTGGGCGTCACCTTTTTGCTGCCTTTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGSRGCVAGPEGRDR*TLAWASPFCCLSSS Trigger: AGAAGAAGAAAGGCAGCAAAAAGGTGACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | GGGGGCTGCAGACAGGAGGTAAGACGAAGACACAGAAAGGTGAGGGACTGGACATGCCAGAAGCGCTCCTaGTCGGGCTCCACGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GGCRQEVRRRHRKVRDWTCQKRS*SGSTRN Trigger: GTTCCTCGTGGAGCCCGACAAGGAGCGCTTCTGGCA...TGTCCAGTCCCTCACCTTTCTGTGTCTTCGTCTTACCTCCTGTCTGCAGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | GCTCGGGGTAAGGTAGAAAAGGGTAAAGCCCAGGGAATGCCAATGGACAGGCGGCTGCCTTTCTTCTTCTaGGCCGAGGCTGCCACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARGKVEKGKAQGMPMDRRLPFFF*AEAATR Trigger: CCTAGTGGCAGCCTCGGCCAAGAAGAAGAAAGGCAG...CCGCCTGTCCATTGGCATTCCCTGGGCTTTACCCTTTTCTACCTTACCCCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | GTAGGGCAGACAAGATGGAGGCCGGAATTGGGAGGTAAGTTCAGCCTCAACCCTTTCATAGTCCAGTGCTaGGCTCCGGTCGCGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGQTRWRPELGGKFSLNPFIVQC*APVAQL Trigger: CAGCTGCGCGACCGGAGCCAAGCACTGGACTATGAA...AGGGTTGAGGCTGAACTTACCTCCCAATTCCGGCCTCCATCTTGTCTGCCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | CTTTCTATCCATCCACAGAGAAGACACCACCGCTGCAAGCGGGGTAGTCTACCAAGAAGGTTCTCGCGGTaGCGTTGCTGGACCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSIHPQRRHHRCKRGSLPRRFSR*RCWTRG Trigger: CCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCT...TGGTAGACTACCCCGCTTGCAGCGGTGGTGTCTTCTCTGTGGATGGATAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS-3UTR CAA 90 bp | AGGGACTGGACAAAACCCAGGGTGGTGGACTTTGAGATGCCCACAGCAGGAAAGGAGGTCTTGAAAGACTaGCGTGAAGAAGTGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RDWTKPRVVDFEMPTAGKEVLKD*REEVGV Trigger: GACCCCCACTTCTTCACGCAAGTCTTTCAAGACCTC...CTTTCCTGCTGTGGGCATCTCAAAGTCCACCACCCTGGGTTTTGTCCAGTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
||
| CDS-3UTR CAA 90 bp | AGGGACTGGACAAAACCCAGGGTGGTGGACTTTGAGATGCCCACAGCAGGAAAGCTCGTTCTTGAGGTCTaGAAAGACTTGCGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RDWTKPRVVDFEMPTAGKLVLEV*KDLREE Trigger: TTCTTCACGCAAGTCTTTCAAGACCTCAAGAACGAG...CTTTCCTGCTGTGGGCATCTCAAAGTCCACCACCCTGGGTTTTGTCCAGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
||
| CDS CAA 72 bp | GTCGTGGGCACCGTGGGCACCGGCACGGCCAGGGGCTaGGCTGTTCCGCCACCGTCGGGGCCGTCGCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VVGTVGTGTARG*AVPPPSGPSRP Trigger: GGGCCGCGACGGCCCCGACGGTGGCGGAACAGCCAAGCCCCTGGCCGTGCCGGTGCCCACGGTGCCCACGAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
||
| CDS CAA 90 bp | GTGGCAGCGGTCGTGGGCACCGTGGGCACCGGCACGGCCAGGGGCTaGGCTGTTCCGCCACCGTCGGGGCCGTCGCGGCCCTTGCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VAAVVGTVGTGTARG*AVPPPSGPSRPLRR Trigger: TCTCCGCAAGGGCCGCGACGGCCCCGACGGTGGCGGAACAGCCAAGCCCCTGGCCGTGCCGGTGCCCACGGTGCCCACGACCGCTGCCAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 72 bp | ACGGGGGCTCGCAGGTGGCAGCGGTCGTGGGCACCGTaGGCACCGGCACGGCCAGGGGCTTGGCTGTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TGARRWQRSWAP*APARPGAWLFR Trigger: GCGGAACAGCCAAGCCCCTGGCCGTGCCGGTGCCCACGGTGCCCACGACCGCTGCCACCTGCGAGCCCCCGT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 72 bp | TGTCCCTGGCGCTCGAGGAGGAGGTGGTGGACGCGCTaGTTCCGCTCGGTGGACCCCCGGTGCTCGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: CPWRSRRRWWTR*FRSVDPRCSPR Trigger: CCGCGGCGAGCACCGGGGGTCCACCGAGCGGAAGCAGCGCGTCCACCACCTCCTCCTCGAGCGCCAGGGACA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 72 bp | CGAGGAGGAGGTGGTGGACGCGCTGCTTCCGCTCGGTaGACCCCCGGTGCTCGCCGCGGCCTCGCCCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: RGGGGGRAASAR*TPGARRGLALV Trigger: AACGAGGGCGAGGCCGCGGCGAGCACCGGGGGTCCACCGAGCGGAAGCAGCGCGTCCACCACCTCCTCCTCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 72 bp | CGGTCGCGCAGCTGTCCCTGGCGCTCGAGGAGGAGGTaGTGGACGCGCTGCTTCCGCTCGGTGGACCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RSRSCPWRSRRR*WTRCFRSVDPR Trigger: CCGGGGGTCCACCGAGCGGAAGCAGCGCGTCCACCACCTCCTCCTCGAGCGCCAGGGACAGCTGCGCGACCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 90 bp | ACTAGGCGCTTCCAGGTGAGCGCCGAGATGAGCACGGACGGCCGTTaGAGCCGGCTCTCGCCTTTGCCGCCCTTGCCGGCCGGCGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: TRRFQVSAEMSTDGR*SRLSPLPPLPAGGA Trigger: CGCGCCGCCGGCCGGCAAGGGCGGCAAAGGCGAGAGCCGGCTCAAACGGCCGTCCGTGCTCATCTCGGCGCTCACCTGGAAGCGCCTAGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 90 bp | GTCGGGGCCGTCGCGGCCCTTGCGGAGAAGGTTCTCGCGGTTGCGTaGCTGGACCAGAGGGTCGGGACCGGTGGACGCTGGCTTGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: VGAVAALAEKVLAVA*LDQRVGTGGRWLGR Trigger: ACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCCCGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 90 bp | CCACCGTCGGGGCCGTCGCGGCCCTTGCGGAGAAGGTTCTCGCGGTaGCGTTGCTGGACCAGAGGGTCGGGACCGGTGGACGCTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: PPSGPSRPLRRRFSR*RCWTRGSGPVDAGL Trigger: CAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCCCGACGGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 90 bp | GCCAGGGGCTTGGCTGTTCCGCCACCGTCGGGGCCGTCGCGGCCCTaGCGGAGAAGGTTCTCGCGGTTGCGTTGCTGGACCAGAGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: ARGLAVPPPSGPSRP*RRRFSRLRCWTRGS Trigger: CGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCCCGACGGTGGCGGAACAGCCAAGCCCCTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 72 bp | GGCCGTCGCGGCCCTTGCGGAGAAGGTTCTCGCGGTTaGGTTGCTGGACCAGAGGGTCGGGACCGGTGGACG | + |
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Preference number: 6 (lower is better) Translates to: GRRGPCGEGSRG*VAGPEGRDRWT Trigger: CGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 72 bp | GGGCCGTCGCGGCCCTTGCGGAGAAGGTTCTCGCGGTaGCGTTGCTGGACCAGAGGGTCGGGACCGGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: GPSRPLRRRFSR*RCWTRGSGPVD Trigger: GTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS TCA 72 bp | GGAACCAGCCCACCAGCTCGCCGGGGCTCAGCTCCTTaGGGCGGTAGCAGCGTCGGCACACGAAGTCGCCGA | + |
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Preference number: 6 (lower is better) Translates to: GTSPPARRGSAP*GGSSVGTRSRR Trigger: TCGGCGACTTCGTGTGCCGACGCTGCTACCGCCTCAAGGAGCTGAGCCCCGGCGAGCTGGTGGGCTGGTTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 72 bp | TCGCGGCCCTTGCGGAGAAGGTTCTCGCGGTTGCGTTaGTGGACCAGAGGGTCGGGACCGGTGGACGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SRPLRRRFSRLR*WTRGSGPVDAG Trigger: GCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 72 bp | TGGCTGTTCCGCCACCGTCGGGGCCGTCGCGGCCCTTaGGGAGAAGGTTCTCGCGGTTGCGTTGCTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: WLFRHRRGRRGP*GEGSRGCVAGP Trigger: TGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCCCGACGGTGGCGGAACAGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 72 bp | TGCGGGCTGAGCCGCTGGATGAGGCGCAGGCAGCGCTaGCAGAAGCGCTCCTTGTCGGGCTCCACGAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: CGLSRWMRRRQR*QKRSLSGSTRN Trigger: GTTCCTCGTGGAGCCCGACAAGGAGCGCTTCTGGCAGCGCTGCCTGCGCCTCATCCAGCGGCTCAGCCCGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 72 bp | TCGGCGTTGAGTCGCAGCATCTGCGGGCTGAGCCGCTaGATGAGGCGCAGGCAGCGCTGCCAGAAGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SALSRSICGLSR*MRRRQRCQKRS Trigger: GGAGCGCTTCTGGCAGCGCTGCCTGCGCCTCATCCAGCGGCTCAGCCCGCAGATGCTGCGACTCAACGCCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 72 bp | TTCCAGGTGAGCGCCGAGATGAGCACGGACGGCCGTTaGAGCCGGCTCTCGCCTTTGCCGCCCTTGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: FQVSAEMSTDGR*SRLSPLPPLPA Trigger: GGCCGGCAAGGGCGGCAAAGGCGAGAGCCGGCTCAAACGGCCGTCCGTGCTCATCTCGGCGCTCACCTGGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 72 bp | GTCGCGGCCCTTGCGGAGAAGGTTCTCGCGGTTGCGTaGCTGGACCAGAGGGTCGGGACCGGTGGACGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VAALAEKVLAVA*LDQRVGTGGRW Trigger: CCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 72 bp | TTGGCTGTTCCGCCACCGTCGGGGCCGTCGCGGCCCTaGCGGAGAAGGTTCTCGCGGTTGCGTTGCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: LAVPPPSGPSRP*RRRFSRLRCWT Trigger: GGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCGCGACGGCCCCGACGGTGGCGGAACAGCCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS GCA 72 bp | GTGAAGAAGTGGGGGTCGGCGTTGAGTCGCAGCATCTaGGGGCTGAGCCGCTGGATGAGGCGCAGGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: VKKWGSALSRSI*GLSRWMRRRQR Trigger: GCGCTGCCTGCGCCTCATCCAGCGGCTCAGCCCGCAGATGCTGCGACTCAACGCCGACCCCCACTTCTTCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 72 bp | CGGCCCTTGCGGAGAAGGTTCTCGCGGTTGCGTTGCTaGACCAGAGGGTCGGGACCGGTGGACGCTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RPLRRRFSRLRC*TRGSGPVDAGL Trigger: CAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCGAGAACCTTCTCCGCAAGGGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 72 bp | CGCGGTTGCGTTGCTGGACCAGAGGGTCGGGACCGGTaGACGCTGGCTTGGGCGTCACCTTTTTGCTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: RGCVAGPEGRDR*TLAWASPFCCL Trigger: AAGGCAGCAAAAAGGTGACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 90 bp | TGGACCCCCGGTGCTCGCCGCGGCCTCGCCCTCGTTCTTGAGGTCTaGAAAGACTTGCGTGAAGAAGTGGGGGTCGGCGTTGAGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: WTPGARRGLALVLEV*KDLREEVGVGVESQ Trigger: CTGCGACTCAACGCCGACCCCCACTTCTTCACGCAAGTCTTTCAAGACCTCAAGAACGAGGGCGAGGCCGCGGCGAGCACCGGGGGTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 72 bp | AGCGACTCCCGGCACAGCAGGTACACGAACACCAGGTaGGCGGGGGTAATGAAGGCCTGGTCTTGCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SDSRHSRYTNTR*AGVMKAWSCQP Trigger: GGGCTGGCAAGACCAGGCCTTCATTACCCCCGCCAACCTGGTGTTCGTGTACCTGCTGTGCCGGGAGTCGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 90 bp | GGTGCTCGCCGCGGCCTCGCCCTCGTTCTTGAGGTCTTGAAAGACTaGCGTGAAGAAGTGGGGGTCGGCGTTGAGTCGCAGCATCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: GARRGLALVLEVLKD*REEVGVGVESQHLR Trigger: CCGCAGATGCTGCGACTCAACGCCGACCCCCACTTCTTCACGCAAGTCTTTCAAGACCTCAAGAACGAGGGCGAGGCCGCGGCGAGCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 90 bp | ACCAGAGGGTCGGGACCGGTGGACGCTGGCTTGGGCGTCACCTTTTaGCTGCCTTTCTTCTTCTTGGCCGAGGCTGCCACTAGGCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TRGSGPVDAGLGVTF*LPFFFLAEAATRRF Trigger: GAAGCGCCTAGTGGCAGCCTCGGCCAAGAAGAAGAAAGGCAGCAAAAAGGTGACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 90 bp | CGGTTGCGTTGCTGGACCAGAGGGTCGGGACCGGTGGACGCTGGCTaGGGCGTCACCTTTTTGCTGCCTTTCTTCTTCTTGGCCGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RLRCWTRGSGPVDAG*GVTFLLPFFFLAEA Trigger: AGCCTCGGCCAAGAAGAAGAAAGGCAGCAAAAAGGTGACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGCAACCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS TCA 72 bp | GTGCTCGCCGCGGCCTCGCCCTCGTTCTTGAGGTCTTaGAAGACTTGCGTGAAGAAGTGGGGGTCGGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: VLAAASPSFLRS*KTCVKKWGSAL Trigger: CAACGCCGACCCCCACTTCTTCACGCAAGTCTTTCAAGACCTCAAGAACGAGGGCGAGGCCGCGGCGAGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 72 bp | GGTGCTCGCCGCGGCCTCGCCCTCGTTCTTGAGGTCTaGAAAGACTTGCGTGAAGAAGTGGGGGTCGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: GARRGLALVLEV*KDLREEVGVGV Trigger: AACGCCGACCCCCACTTCTTCACGCAAGTCTTTCAAGACCTCAAGAACGAGGGCGAGGCCGCGGCGAGCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CCA 72 bp | GCGTTGCTGGACCAGAGGGTCGGGACCGGTGGACGCTaGCTTGGGCGTCACCTTTTTGCTGCCTTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ALLDQRVGTGGR*LGRHLFAAFLL Trigger: AAGAAGAAAGGCAGCAAAAAGGTGACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCAACGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 72 bp | CGCGGCCTCGCCCTCGTTCTTGAGGTCTTGAAAGACTaGCGTGAAGAAGTGGGGGTCGGCGTTGAGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RGLALVLEVLKD*REEVGVGVESQ Trigger: CTGCGACTCAACGCCGACCCCCACTTCTTCACGCAAGTCTTTCAAGACCTCAAGAACGAGGGCGAGGCCGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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| CDS CAA 72 bp | TGCTGGACCAGAGGGTCGGGACCGGTGGACGCTGGCTaGGGCGTCACCTTTTTGCTGCCTTTCTTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: CWTRGSGPVDAG*GVTFLLPFFFL Trigger: CAAGAAGAAGAAAGGCAGCAAAAAGGTGACGCCCAAGCCAGCGTCCACCGGTCCCGACCCTCTGGTCCAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160379.4 |
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