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Pregenerated sensors for CDK3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000092300

Ensembl transcript IDs: ENSMUST00000174177.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TGGGCCAGGGCAGTCTTGGCTGAGATCCGCTGGCTGGGGTCATACTaGAGGAGTCGCAGGAGCAGGTCCTTGCCTTCTGGTCCCAGACTA +
Preference number: 5 (lower is better)
Translates to: WARAVLAEIRWLGSY*RSRRSRSLPSGPRL
Trigger: TAGTCTGGGACCAGAAGGCAAGGACCTGCTCCTGCGACTCCTGCAGTATGACCCCAGCCAGCGGATCTCAGCCAAGACTGCCCTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS CCA 90 bp GCTGGGGTCATACTGCAGGAGTCGCAGGAGCAGGTCCTTGCCTTCTaGTCCCAGACTAGGCACGATTTCCTCCAGCCCCTTCCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: AGVILQESQEQVLAF*SQTRHDFLQPLPAP
Trigger: TGGAGCAGGAAGGGGCTGGAGGAAATCGTGCCTAGTCTGGGACCAGAAGGCAAGGACCTGCTCCTGCGACTCCTGCAGTATGACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS CCA 90 bp AGAAGTAGGGATGGGCCAGGGCAGTCTTGGCTGAGATCCGCTGGCTaGGGTCATACTGCAGGAGTCGCAGGAGCAGGTCCTTGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: RSRDGPGQSWLRSAG*GHTAGVAGAGPCLL
Trigger: CAGAAGGCAAGGACCTGCTCCTGCGACTCCTGCAGTATGACCCCAGCCAGCGGATCTCAGCCAAGACTGCCCTGGCCCATCCCTACTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS CCA 90 bp GTGGCTTCACTGGGGGTCCCCAGGGTGCGAAAGATCCGAAAGAGCTaGTCAATCTCTGAGTCACCCGGAAACAGAGCTTTGCCAGTCACC +
Preference number: 5 (lower is better)
Translates to: VASLGVPRVRKIRKS*SISESPGNRALPVT
Trigger: GGTGACTGGCAAAGCTCTGTTTCCGGGTGACTCAGAGATTGACCAGCTCTTTCGGATCTTTCGCACCCTGGGGACCCCCAGTGAAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS TCA 72 bp AACTCACCCCTTCCAGCAGCTGGGCAAGGTAGCTCTTaGCAACGGGCAGAGGGAGCTCTGAGGTGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: NSPLPAAGQGSS*QRAEGALRWGR
Trigger: CCTCCCCCACCTCAGAGCTCCCTCTGCCCGTTGTCAAGAGCTACCTTGCCCAGCTGCTGGAAGGGGTGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS CAA 90 bp ATCCGCTGGCTGGGGTCATACTGCAGGAGTCGCAGGAGCAGGTCCTaGCCTTCTGGTCCCAGACTAGGCACGATTTCCTCCAGCCCCTTC +
Preference number: 6 (lower is better)
Translates to: IRWLGSYCRSRRSRS*PSGPRLGTISSSPF
Trigger: GAAGGGGCTGGAGGAAATCGTGCCTAGTCTGGGACCAGAAGGCAAGGACCTGCTCCTGCGACTCCTGCAGTATGACCCCAGCCAGCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS GCA 72 bp GCAGTCTTGGCTGAGATCCGCTGGCTGGGGTCATACTaGAGGAGTCGCAGGAGCAGGTCCTTGCCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: AVLAEIRWLGSY*RSRRSRSLPSG
Trigger: ACCAGAAGGCAAGGACCTGCTCCTGCGACTCCTGCAGTATGACCCCAGCCAGCGGATCTCAGCCAAGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS CCA 72 bp TCTGATAGTCAGGCATCTGGGAGACTCCGGGCCATGTaGCTTCACTGGGGGTCCCCAGGGTGCGAAAGATCC +
Preference number: 6 (lower is better)
Translates to: SDSQASGRLRAM*LHWGSPGCERS
Trigger: GGATCTTTCGCACCCTGGGGACCCCCAGTGAAGCCACATGGCCCGGAGTCTCCCAGATGCCTGACTATCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS TCA 72 bp TGGGGTGCTTCAGTTCTTTCAGCAGCGAGATCTCCCTaGCGGCAGTGCTGGGAACTCCCTCGGCCTCCAGAT +
Preference number: 6 (lower is better)
Translates to: WGASVLSAARSP*RQCWELPRPPD
Trigger: ATCTGGAGGCCGAGGGAGTTCCCAGCACTGCCGTCAGGGAGATCTCGCTGCTGAAAGAACTGAAGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS CAA 72 bp CTGGGGTCATACTGCAGGAGTCGCAGGAGCAGGTCCTaGCCTTCTGGTCCCAGACTAGGCACGATTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LGSYCRSRRSRS*PSGPRLGTISS
Trigger: GGAGGAAATCGTGCCTAGTCTGGGACCAGAAGGCAAGGACCTGCTCCTGCGACTCCTGCAGTATGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS CCA 72 bp CTGGGGGTCCCCAGGGTGCGAAAGATCCGAAAGAGCTaGTCAATCTCTGAGTCACCCGGAAACAGAGCTTTG +
Preference number: 6 (lower is better)
Translates to: LGVPRVRKIRKS*SISESPGNRAL
Trigger: CAAAGCTCTGTTTCCGGGTGACTCAGAGATTGACCAGCTCTTTCGGATCTTTCGCACCCTGGGGACCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS TCA 72 bp TGGGGGAGGAATCCATGTGCCTCTTCAGGTCCTGAGTaGGGAACTCGAACACCATATACAGCTTCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: WGRNPCASSGPE*GTRTPYTASSL
Trigger: GAGAGAAGAAGCTGTATATGGTGTTCGAGTTCCTCACTCAGGACCTGAAGAGGCACATGGATTCCTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS CAA 90 bp TACAGCTTCTTCTCTCTGTGGACCACATCCAGCAGCTTGATAATATaGGGGTGCTTCAGTTCTTTCAGCAGCGAGATCTCCCTGACGGCA +
Preference number: 6 (lower is better)
Translates to: YSFFSLWTTSSSLII*GCFSSFSSEISLTA
Trigger: TGCCGTCAGGGAGATCTCGCTGCTGAAAGAACTGAAGCACCCCAATATTATCAAGCTGCTGGATGTGGTCCACAGAGAGAAGAAGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2
CDS CAA 90 bp AACACCATATACAGCTTCTTCTCTCTGTGGACCACATCCAGCAGCTaGATAATATTGGGGTGCTTCAGTTCTTTCAGCAGCGAGATCTCC +
Preference number: 6 (lower is better)
Translates to: NTIYSFFSLWTTSSS*IILGCFSSFSSEIS
Trigger: GGAGATCTCGCTGCTGAAAGAACTGAAGCACCCCAATATTATCAAGCTGCTGGATGTGGTCCACAGAGAGAAGAAGCTGTATATGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174177.2