Pregenerated sensors for CDK2AP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024856Ensembl transcript IDs: ENSMUST00000025779.11, ENSMUST00000174514.2, ENSMUST00000174799.2
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCCCAAATGTCCTGTCCTGACTCTAGATATCCTCCATCCTTACTaGACTGTCTTAAAGTTCAGTGTCTGTGTCCTGGGCAGAGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: WPKCPVLTLDILHPY*TVLKFSVCVLGRAR Trigger: CCTTGCTCTGCCCAGGACACAGACACTGAACTTTAAGACAGTTCAGTAAGGATGGAGGATATCTAGAGTCAGGACAGGACATTTGGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174514.2 |
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| 3UTR CCA 90 bp | CATTTAAAACCCCTCCTTAGGTACACGTTCTGTTCCAATCGAGGCTaGCCCAAATGTCCTGTCCTGACTCTAGATATCCTCCATCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: HLKPLLRYTFCSNRG*PKCPVLTLDILHPY Trigger: GTAAGGATGGAGGATATCTAGAGTCAGGACAGGACATTTGGGCCAGCCTCGATTGGAACAGAACGTGTACCTAAGGAGGGGTTTTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174514.2 |
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| 3UTR CCA 90 bp | AGCAAGAGCACCTCTAATCTAATGAGGATGGATGGGATTAAGGGTTaGCTAATCCGAGTTCCCAGGCACCTTCTTGGAAACAGACTCATT | + |
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Preference number: 1 (lower is better) Translates to: SKSTSNLMRMDGIKG*LIRVPRHLLGNRLI Trigger: AATGAGTCTGTTTCCAAGAAGGTGCCTGGGAACTCGGATTAGCCAACCCTTAATCCCATCCATCCTCATTAGATTAGAGGTGCTCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174514.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACTGTGAGCAGGTCATGGAAGGGACTCCCAGTGGCCTCCCAGCACTCCCACGTGCCCGAGCGTGGATaGTGCCTCTCTTCAGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: STVSRSWKGLPVASQHSHVPERG*CLSSGA Trigger: AGCGCCTGAAGAGAGGCATCATCCACGCTCGGGCAC...GTGGGAGTGCTGGGAGGCCACTGGGAGTCCCTTCCATGACCTGCTCACAGTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174799.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGAGAGGAGCAAGCTCCCGTCAGATCAGCACTGTGAGCAGGTCATGGAAGGGAAGGGACTCCCAGTaGCCTCCCAGCACTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: PQRGASSRQISTVSRSWKGRDSQ*PPSTPT Trigger: TGTGGGAGTGCTGGGAGGCCACTGGGAGTCCCTTCC...CTTCCATGACCTGCTCACAGTGCTGATCTGACGGGAGCTTGCTCCTCTCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025779.11 ENSMUST00000174799.2 |
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| 3UTR-3UTR CCA 90 bp | GATCAGCACTGTGAGCAGGTCATGGAAGGGACTCCCAGTGGCCTCCCAGCACTCACTGTGAGCAGGTCATaGAAGGGACTCCCAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: DQHCEQVMEGTPSGLPALTVSRS*KGLPVA Trigger: GGCCACTGGGAGTCCCTTCCATGACCTGCTCACAGT...GAGTGCTGGGAGGCCACTGGGAGTCCCTTCCATGACCTGCTCACAGTGCTGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025779.11 ENSMUST00000174799.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCTCCCGTCAGATCAGCACTGTGAGCAGGTCATGGAAGGGACTCCCAGTGACTGTGAGCAGGTCATaGAAGGGACTCCCAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: ASSRQISTVSRSWKGLPVTVSRS*KGLPVA Trigger: GGCCACTGGGAGTCCCTTCCATGACCTGCTCACAGT...CACTGGGAGTCCCTTCCATGACCTGCTCACAGTGCTGATCTGACGGGAGCTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025779.11 ENSMUST00000174799.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCGTCAGATCAGCACTGTGAGCAGGTCATGGAAGGGACTCCCAGTGGCCTCCACTAGTGCCCGAGCGTaGATGATGCCTCTCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SRQISTVSRSWKGLPVASTSARA*MMPLFR Trigger: CCTGAAGAGAGGCATCATCCACGCTCGGGCACTAGT...GGAGGCCACTGGGAGTCCCTTCCATGACCTGCTCACAGTGCTGATCTGACGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174799.2 |
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| 3UTR-3UTR TCA 90 bp | CCACAGAGAGGAGCAAGCTCCCGTCAGATCAGCACTGTGAGCAGGTCATGGAAGCTTCTGCACTCCTGTTaGAGAGGCAGGAGGTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PQRGASSRQISTVSRSWKLLHSC*RGRRWP Trigger: AGGCCACCTCCTGCCTCTTCAACAGGAGTGCAGAAG...CTTCCATGACCTGCTCACAGTGCTGATCTGACGGGAGCTTGCTCCTCTCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025779.11 ENSMUST00000174799.2 |
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| 3UTR-3UTR CCA 90 bp | AACCCCTCCTTAGGTACACGTTCTGTTCCAATCGAGGCTGGCCCAAATGTCCTGTCAGTGTCTGTGTCCTaGGCAGAGCAAGGGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NPSLGTRSVPIEAGPNVLSVSVS*AEQGQA Trigger: GGCCTGCCCTTGCTCTGCCCAGGACACAGACACTGA...CAGGACATTTGGGCCAGCCTCGATTGGAACAGAACGTGTACCTAAGGAGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174514.2 |
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| 3UTR CCA 72 bp | GCCACCCTTCAGAGCAGACACTCCCCCACCGCTCCATaGTTCAGCAAGAGCACCTCTAATCTAATGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: ATLQSRHSPTAP*FSKSTSNLMRM Trigger: CATCCTCATTAGATTAGAGGTGCTCTTGCTGAACCATGGAGCGGTGGGGGAGTGTCTGCTCTGAAGGGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174514.2 |
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| 3UTR CCA 72 bp | CCCCTCCTTAGGTACACGTTCTGTTCCAATCGAGGCTaGCCCAAATGTCCTGTCCTGACTCTAGATATCCTC | + |
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Preference number: 3 (lower is better) Translates to: PLLRYTFCSNRG*PKCPVLTLDIL Trigger: GAGGATATCTAGAGTCAGGACAGGACATTTGGGCCAGCCTCGATTGGAACAGAACGTGTACCTAAGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174514.2 |
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| 3UTR CCA 72 bp | ACCTCTAATCTAATGAGGATGGATGGGATTAAGGGTTaGCTAATCCGAGTTCCCAGGCACCTTCTTGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: TSNLMRMDGIKG*LIRVPRHLLGN Trigger: GTTTCCAAGAAGGTGCCTGGGAACTCGGATTAGCCAACCCTTAATCCCATCCATCCTCATTAGATTAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174514.2 |
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| CDS-3UTR GCA 90 bp | CAGCACTGTGAGCAGGTCATGGAAGGGACTCCCAGTGGCCTCCCAGCACTCCCATGCCTGGCCCGGGGGTaGTGGAGCCCGGGGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: QHCEQVMEGTPSGLPALPCLARG*WSPGYC Trigger: GCAGTACCCCGGGCTCCAGCACCCCCGGGCCAGGCA...TGGGAGTGCTGGGAGGCCACTGGGAGTCCCTTCCATGACCTGCTCACAGTGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025779.11 ENSMUST00000174799.2 |
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| CDS-3UTR GCA 90 bp | GTGCTGTGTGGTGGGGCCACAGAGAGGAGCAAGCTCCCGTCAGATCAGCACTGTTGCCTGGCCCGGGGGTaGTGGAGCCCGGGGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: VLCGGATERSKLPSDQHCCLARG*WSPGYC Trigger: GCAGTACCCCGGGCTCCAGCACCCCCGGGCCAGGCA...ACAGTGCTGATCTGACGGGAGCTTGCTCCTCTCTGTGGCCCCACCACACAGCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025779.11 ENSMUST00000174799.2 |
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| CDS-3UTR TCA 90 bp | GTGCTGTGTGGTGGGGCCACAGAGAGGAGCAAGCTCCCGTCAGATCAGCACTGTGGCAGCTCCTGGCACTaGGCCCGATGGCGATGGGAC | + |
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Preference number: 4 (lower is better) Translates to: VLCGGATERSKLPSDQHCGSSWH*ARWRWD Trigger: GTCCCATCGCCATCGGGCTCAGTGCCAGGAGCTGCC...ACAGTGCTGATCTGACGGGAGCTTGCTCCTCTCTGTGGCCCCACCACACAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025779.11 ENSMUST00000174799.2 |
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| CDS-3UTR TCA 90 bp | CCCAGCACTCCCACAGAGGGAGGAGACCAGTTTGTACAGCCAACTGGACGAAGAGGCAGCTCCTGGCACTaGGCCCGATGGCGATGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PSTPTEGGDQFVQPTGRRGSSWH*ARWRWD Trigger: GTCCCATCGCCATCGGGCTCAGTGCCAGGAGCTGCC...TCTTCGTCCAGTTGGCTGTACAAACTGGTCTCCTCCCTCTGTGGGAGTGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025779.11 ENSMUST00000174799.2 |
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| CDS-3UTR TCA 90 bp | GCAAGCTCCCGTCAGATCAGCACTGTGAGCAGGTCATGGAAGGGACTCCCAGTGGTGCCCGAGCGTGGATaGTGCCTCTCTTCAGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: ASSRQISTVSRSWKGLPVVPERG*CLSSGA Trigger: AGCGCCTGAAGAGAGGCATCATCCACGCTCGGGCAC...CACTGGGAGTCCCTTCCATGACCTGCTCACAGTGCTGATCTGACGGGAGCTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025779.11 |
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| CDS-3UTR CCA 90 bp | GTGCTGTGTGGTGGGGCCACAGAGAGGAGCAAGCTCCCGTCAGATCAGCACTGTACTAGTGCCCGAGCGTaGATGATGCCTCTCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VLCGGATERSKLPSDQHCTSARA*MMPLFR Trigger: CCTGAAGAGAGGCATCATCCACGCTCGGGCACTAGT...ACAGTGCTGATCTGACGGGAGCTTGCTCCTCTCTGTGGCCCCACCACACAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025779.11 |
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| CDS-3UTR GCA 90 bp | TCTAATCTAATGAGGATGGATGGGATTAAGGGTTGGCTAATCCGAGTTCCCAGGTGCCTGGCCCGGGGGTaGTGGAGCCCGGGGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: SNLMRMDGIKGWLIRVPRCLARG*WSPGYC Trigger: GCAGTACCCCGGGCTCCAGCACCCCCGGGCCAGGCA...CCTGGGAACTCGGATTAGCCAACCCTTAATCCCATCCATCCTCATTAGATTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174514.2 |
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| 3UTR CAA 72 bp | GGCCTCCCAGCACTCCCACAGAGGGAGGAGACCAGTTaGTACAGCCAACTGGACGAAGATCTGCTACCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GLPALPQREETS*YSQLDEDLLPG Trigger: ACCAGGTAGCAGATCTTCGTCCAGTTGGCTGTACAAACTGGTCTCCTCCCTCTGTGGGAGTGCTGGGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025779.11 ENSMUST00000174799.2 |
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| CDS-3UTR TCA 90 bp | TCTAATCTAATGAGGATGGATGGGATTAAGGGTTGGCTAATCCGAGTTCCCAGGGGCAGCTCCTGGCACTaGGCCCGATGGCGATGGGAC | + |
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Preference number: 4 (lower is better) Translates to: SNLMRMDGIKGWLIRVPRGSSWH*ARWRWD Trigger: GTCCCATCGCCATCGGGCTCAGTGCCAGGAGCTGCC...CCTGGGAACTCGGATTAGCCAACCCTTAATCCCATCCATCCTCATTAGATTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174514.2 |
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