Pregenerated sensors for CDK20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021483Ensembl transcript IDs: ENSMUST00000021939.8, ENSMUST00000222470.2, ENSMUST00000222562.2, ENSMUST00000222576.2, ENSMUST00000223121.2, ENSMUST00000223419.2
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCAGCTCGGATGGATGGGCAGGCAGAGGCGCTGTGAAGAAGTACTaGTGCAGAAGGGCCTGGGAGGCTGCAATACGCTGTCGTGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: GSSDGWAGRGAVKKY*CRRAWEAAIRCRGG Trigger: CCCTCCACGACAGCGTATTGCAGCCTCCCAGGCCCTTCTGCATCAGTACTTCTTCACAGCGCCTCTGCCTGCCCATCCATCCGAGCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| 3UTR GCA 90 bp | GCAGCCTCAGGCTCACTGACTGACCCACCCGACATGTGGGAAGTGTaGTTCGGGAACTGGACTGTCCATCCCTGGGCCTCAGCTTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: AASGSLTDPPDMWEV*FGNWTVHPWASASG Trigger: TCCAGAAGCTGAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACACTTCCCACATGTCGGGTGGGTCAGTCAGTGAGCCTGAGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR GCA 90 bp | GGCCTGGGGAGAGGCATCAGGCAGCACCTCCTCCAGGGGCACTGGTaGCTGCTCCTTGAAGGAGATCTTGTTGTAGTCAGGCAGCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: GLGRGIRQHLLQGHW*LLLEGDLVVVRQLC Trigger: ACAGAGCTGCCTGACTACAACAAGATCTCCTTCAAGGAGCAGGCACCAGTGCCCCTGGAGGAGGTGCTGCCTGATGCCTCTCCCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000222470.2 ENSMUST00000222576.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| 3UTR CCA 90 bp | CTTGGGTGCAGGTCCCCCTGGGCGCTGAGGAATTGGCAGCTCGGATaGATGGGCAGGCAGAGGCGCTGTGAAGAAGTACTGATGCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: LGCRSPWALRNWQLG*MGRQRRCEEVLMQK Trigger: CTTCTGCATCAGTACTTCTTCACAGCGCCTCTGCCTGCCCATCCATCCGAGCTGCCAATTCCTCAGCGCCCAGGGGGACCTGCACCCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| 3UTR CCA 90 bp | TCACTGACTGACCCACCCGACATGTGGGAAGTGTGCTTCGGGAACTaGACTGTCCATCCCTGGGCCTCAGCTTCTGGACTCTCGCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: SLTDPPDMWEVCFGN*TVHPWASASGLSLP Trigger: TGGGAGCGAGAGTCCAGAAGCTGAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACACTTCCCACATGTCGGGTGGGTCAGTCAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR TCA 90 bp | CCAGGAATGTCTGCTTCCGCATCTGCAAGGCAGCCTCAGGCTCACTaGCTGACCCACCCGACATGTGGGAAGTGTGCTTCGGGAACTGGA | + |
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Preference number: 1 (lower is better) Translates to: PGMSASASARQPQAH*LTHPTCGKCASGTG Trigger: TCCAGTTCCCGAAGCACACTTCCCACATGTCGGGTGGGTCAGTCAGTGAGCCTGAGGCTGCCTTGCAGATGCGGAAGCAGACATTCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR TCA 90 bp | GAATGTCTGCTTCCGCATCTGCAAGGCAGCCTCAGGCTCACTGACTaGCCCACCCGACATGTGGGAAGTGTGCTTCGGGAACTGGACTGT | + |
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Preference number: 1 (lower is better) Translates to: ECLLPHLQGSLRLTD*PTRHVGSVLRELDC Trigger: ACAGTCCAGTTCCCGAAGCACACTTCCCACATGTCGGGTGGGTCAGTCAGTGAGCCTGAGGCTGCCTTGCAGATGCGGAAGCAGACATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR CCA 90 bp | CCCGACATGTGGGAAGTGTGCTTCGGGAACTGGACTGTCCATCCCTaGGCCTCAGCTTCTGGACTCTCGCTCCCAAATGAGCACTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: PDMWEVCFGNWTVHP*ASASGLSLPNEHSS Trigger: ACTTGAGTGCTCATTTGGGAGCGAGAGTCCAGAAGCTGAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACACTTCCCACATGTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR CCA 90 bp | CTAGAACAGAGTCCTGCAGCTCCAGGACTCTTAGAGCCTCATGTCTaGGCTACCCAGCTCCTCCTCGATTTGGGGGCGGGGCATAAATGC | + |
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Preference number: 1 (lower is better) Translates to: LEQSPAAPGLLEPHV*ATQLLLDLGAGHKC Trigger: GCATTTATGCCCCGCCCCCAAATCGAGGAGGAGCTGGGTAGCCCAGACATGAGGCTCTAAGAGTCCTGGAGCTGCAGGACTCTGTTCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| 3UTR TCA 90 bp | TCACCCCTCTGGGATGAAGGGCCGAATCAGTTCTGGGTTCAACAGTaGCTCCTCAAGAGGTCGATCCACATGGAAGTCGTGGACATGGGG | + |
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Preference number: 1 (lower is better) Translates to: SPLWDEGPNQFWVQQ*LLKRSIHMEVVDMG Trigger: CCCCATGTCCACGACTTCCATGTGGATCGACCTCTTGAGGAGTCACTGTTGAACCCAGAACTGATTCGGCCCTTCATCCCAGAGGGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| 3UTR CCA 90 bp | CCCCTCCTCGACATCGCAGGATCTAGACCAGTGGTTCTCATCCTGTaGGTCTTGACCCCCTTGGGAATCACATGTGAGATATTTACATTA | + |
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Preference number: 1 (lower is better) Translates to: PLLDIAGSRPVVLIL*VLTPLGITCEIFTL Trigger: TAATGTAAATATCTCACATGTGATTCCCAAGGGGGTCAAGACCCACAGGATGAGAACCACTGGTCTAGATCCTGCGATGTCGAGGAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR TCA 90 bp | TATAGCTCTTGCAGAGTACCTGTCCAGCACACACAATCCCAGCACTaGAGACTCCAGAATCAGTGGCTCACACCTACAATCTCAGCACAT | + |
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Preference number: 1 (lower is better) Translates to: YSSCRVPVQHTQSQH*RLQNQWLTPTISAH Trigger: ATGTGCTGAGATTGTAGGTGTGAGCCACTGATTCTGGAGTCTTCAGTGCTGGGATTGTGTGTGCTGGACAGGTACTCTGCAAGAGCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR TCA 90 bp | CCTCCATCAGTGTCCACTGGGAACTGCTTCCAGAACCCTGCAGAATaGCTCTGGATTCTCCTGCATTTGTCTATTCTTAGCTCTCTCACT | + |
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Preference number: 1 (lower is better) Translates to: PPSVSTGNCFQNPAE*LWILLHLSILSSLT Trigger: AGTGAGAGAGCTAAGAATAGACAAATGCAGGAGAATCCAGAGTCATTCTGCAGGGTTCTGGAAGCAGTTCCCAGTGGACACTGATGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR CCA 90 bp | ATAAAACACAAGCTGGCTGAGTCACACTGGAATTTATTTACTGAGTaGATTCCAGGAATGTCTGCTTCCGCATCTGCAAGGCAGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: IKHKLAESHWNLFTE*IPGMSASASARQPQ Trigger: CTGAGGCTGCCTTGCAGATGCGGAAGCAGACATTCCTGGAATCCACTCAGTAAATAAATTCCAGTGTGACTCAGCCAGCTTGTGTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR TCA 90 bp | TCGACATCGCAGGATCTAGACCAGTGGTTCTCATCCTGTGGGTCTTaGCCCCCTTGGGAATCACATGTGAGATATTTACATTATAATTCA | + |
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Preference number: 1 (lower is better) Translates to: STSQDLDQWFSSCGS*PPWESHVRYLHYNS Trigger: TGAATTATAATGTAAATATCTCACATGTGATTCCCAAGGGGGTCAAGACCCACAGGATGAGAACCACTGGTCTAGATCCTGCGATGTCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR GCA 90 bp | CTATTCTACCTTATCACTTTACAAAGTACCAAGACGTGTGGTTACTaGACCGTCTCTAGTGAGTCCACCATCTGGAAACCCACAGATGTT | + |
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Preference number: 1 (lower is better) Translates to: LFYLITLQSTKTCGY*TVSSESTIWKPTDV Trigger: AACATCTGTGGGTTTCCAGATGGTGGACTCACTAGAGACGGTGCAGTAACCACACGTCTTGGTACTTTGTAAAGTGATAAGGTAGAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR CCA 90 bp | ACACAAGCTACCACCTGTGTGTACGTAAGAGCTACAAGAAGTCAATaGAGCTCAACTGTCCTTAGAATTTGCAAAGATGTGACCAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: TQATTCVYVRATRSQ*SSTVLRICKDVTRE Trigger: TTCTCTGGTCACATCTTTGCAAATTCTAAGGACAGTTGAGCTCCATTGACTTCTTGTAGCTCTTACGTACACACAGGTGGTAGCTTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR GCA 90 bp | GTAAGAGCTACAAGAAGTCAATGGAGCTCAACTGTCCTTAGAATTTaGAAAGATGTGACCAGAGAAATAAACAGAGGTCGGATTATGAAG | + |
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Preference number: 1 (lower is better) Translates to: VRATRSQWSSTVLRI*KDVTREINRGRIMK Trigger: CTTCATAATCCGACCTCTGTTTATTTCTCTGGTCACATCTTTGCAAATTCTAAGGACAGTTGAGCTCCATTGACTTCTTGTAGCTCTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGGGCACCACTGAGGGGTaGCCCTGGAGAAGGACACAG | + |
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Preference number: 2 (lower is better) Translates to: GHGGKSERGAPRASRKAWGTTEG*PWRRTQ Trigger: CTGTGTCCTTCTCCAGGGCCACCCCTCAGTGGTGCC...CCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCCTTGGGTGCAGGTCCCCCTGGGCGCTGAGGAATTGGCAGCTCGGATGGCTTTCTCTGCTGGGATaGACATCTCACGGTTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: VSLGCRSPWALRNWQLGWLSLLG*TSHGSA Trigger: GGCAGAACCGTGAGATGTTCATCCCAGCAGAGAAAG...CCATCCGAGCTGCCAATTCCTCAGCGCCCAGGGGGACCTGCACCCAAGGCTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAACAGTGACTCCTCAAGAGGTCGATCCACATGGAAGTCGTGGACATGGGGGGCCGGGTGGCACCACTaGGGGGTGGCCCTGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: FNSDSSRGRSTWKSWTWGAGWHH*GVALEK Trigger: CTTCTCCAGGGCCACCCCTCAGTGGTGCCACCCGGC...CCCCCATGTCCACGACTTCCATGTGGATCGACCTCTTGAGGAGTCACTGTTGAA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCTTCGGGAACTGGACTGTCCATCCCTGGGCCTCAGCTTCTGGACTCTCGCCCCACCTCAGACCCCTaGGTGGGGTTACAGGCATAC | + |
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Preference number: 2 (lower is better) Translates to: CASGTGLSIPGPQLLDSRPTSDP*VGLQAY Trigger: GTATGCCTGTAACCCCACTCAGGGGTCTGAGGTGGG...GCGAGAGTCCAGAAGCTGAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGCCTGGGAGGCTGCAATACGCTGTCGTGGAGGGTAGAGGAGGAACTGGCAACATCTCACGGTTCTaGCTCCCAGAGCCCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: EGPGRLQYAVVEGRGGTGNISRF*LPEPSP Trigger: AGGGCTGGGCTCTGGGAGGCAGAACCGTGAGATGTT...GCCAGTTCCTCCTCTACCCTCCACGACAGCGTATTGCAGCCTCCCAGGCCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCTGTGATCTCCGGCCAGACTCGAGGACTCGGGGTACCCAGGATGCGAAGCACGCCCTGGTCATACTaGCGAGCGCCATACAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SSVISGQTRGLGVPRMRSTPWSY*RAPYRS Trigger: ACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGT...GCTTCGCATCCTGGGTACCCCGAGTCCTCGAGTCTGGCCGGAGATCACAGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222576.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCGACATGTGGGAAGTGTGCTTCGGGAACTGGACTGTCCATCCCTGGGCCTCAACATCTCACGGTTCTaGCTCCCAGAGCCCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: TRHVGSVLRELDCPSLGLNISRF*LPEPSP Trigger: AGGGCTGGGCTCTGGGAGGCAGAACCGTGAGATGTT...GAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACACTTCCCACATGTCGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCGACATGTGGGAAGTGTGCTTCGGGAACTGGACTGTCCATCCCTGGGCCTCCTTTCTCTGCTGGGATaGACATCTCACGGTTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: TRHVGSVLRELDCPSLGLLSLLG*TSHGSA Trigger: GGCAGAACCGTGAGATGTTCATCCCAGCAGAGAAAG...GAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACACTTCCCACATGTCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGCAGGTCCAAGGCCTGGGGAGATGAACCTCAAATCCTaGCCCAGTGGAACCAAAACT | + |
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Preference number: 2 (lower is better) Translates to: AVVEGRGGTGPAGPRPGEMNLKS*PSGTKT Trigger: AGTTTTGGTTCCACTGGGTCAGGATTTGAGGTTCAT...CTCCCCAGGCCTTGGACCTGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCGACATGTGGGAAGTGTGCTTCGGGAACTGGACTGTCCATCCCTGGGCCTCACTCTCGCTCCCAAATaGGCACTCAAGTCCCGTGAA | + |
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Preference number: 2 (lower is better) Translates to: TRHVGSVLRELDCPSLGLTLAPK*ALKSRE Trigger: TTCACGGGACTTGAGTGCTCATTTGGGAGCGAGAGT...GAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACACTTCCCACATGTCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCGCTGTGAAGAAGTACTGATGCAGAAGGGCCTGGGAGGCTGCAATACGCTGACTGAGGGGTGGCCCTaGAGAAGGACACAGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: RRCEEVLMQKGLGGCNTLTEGWP*RRTQLA Trigger: TGCTAGCTGTGTCCTTCTCCAGGGCCACCCCTCAGT...CAGCGTATTGCAGCCTCCCAGGCCCTTCTGCATCAGTACTTCTTCACAGCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGATTCCAGGAATGTCTGCTTCCGCATCTGCAAGGCAGCCTCAGGCTCACTACTGAGGGGTGGCCCTaGAGAAGGACACAGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: SGFQECLLPHLQGSLRLTTEGWP*RRTQLA Trigger: TGCTAGCTGTGTCCTTCTCCAGGGCCACCCCTCAGT...AGTGAGCCTGAGGCTGCCTTGCAGATGCGGAAGCAGACATTCCTGGAATCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGCCCAGGGCTTTTATATaGACCTCAAATCCTGACCCA | + |
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Preference number: 2 (lower is better) Translates to: GHGGKSERGAPRASRKAWPRAFI*TSNPDP Trigger: TGGGTCAGGATTTGAGGTTCATATAAAAGCCCTGGG...CCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGATGCAGAAGGGCCTGGGAGGCTGCAATACGCTGTCGTGGAGGGTAGAGGAACAGCTTATACTCTGTaGTTCCACCAGGTGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TDAEGPGRLQYAVVEGRGTAYTL*FHQVVL Trigger: CAGCACCACCTGGTGGAAGCACAGAGTATAAGCTGT...TCCTCTACCCTCCACGACAGCGTATTGCAGCCTCCCAGGCCCTTCTGCATCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGGCCTCAGCTTCTGGACTCTCGCTCCCAAATGAGCACTCAAGTCCCGTGCCTGAAAACAGCATCTaGGCTCTTCCTTGTAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: PWASASGLSLPNEHSSPVPENSI*ALPCRH Trigger: ATGCCTACAAGGAAGAGCGCAGATGCTGTTTTCAGG...CACGGGACTTGAGTGCTCATTTGGGAGCGAGAGTCCAGAAGCTGAGGCCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCTTGGGTGCAGGTCCCCCTGGGCGCTGAGGAATTGGCAGCTCGGATGGATACAAAACATACTACATaGCTTGTACCCCAGACTACC | + |
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Preference number: 2 (lower is better) Translates to: EPWVQVPLGAEELAARMDTKHTT*LVPQTT Trigger: GGTAGTCTGGGGTACAAGGCATGTAGTATGTTTTGT...ATCCATCCGAGCTGCCAATTCCTCAGCGCCCAGGGGGACCTGCACCCAAGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGATGCAGAAGGGCCTGGGAGGCTGCAATACGCTGTCGTGGAGGGTAGAGGATACAGAGCTAAGCGGTaGGAGATGTCACACGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: TDAEGPGRLQYAVVEGRGYRAKR*EMSHVS Trigger: ACTCACGTGTGACATCTCCCACCGCTTAGCTCTGTA...TCCTCTACCCTCCACGACAGCGTATTGCAGCCTCCCAGGCCCTTCTGCATCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTATTCTTAGCTCTCTCACTACTCACATCTGTCCTAAGACCTGAAGTTGGAGCCGGGTGGCACCACTaGGGGGTGGCCCTGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CLFLALSLLTSVLRPEVGAGWHH*GVALEK Trigger: CTTCTCCAGGGCCACCCCTCAGTGGTGCCACCCGGC...TCCAACTTCAGGTCTTAGGACAGATGTGAGTAGTGAGAGAGCTAAGAATAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTTCGGGAACTGGACTGTCCATCCCTGGGCCTCAGCTTCTGGACTCTCGCAGTCTCTTTCTCTGCTaGGATGAACATCTCACGGTT | + |
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Preference number: 2 (lower is better) Translates to: CASGTGLSIPGPQLLDSRSLFLC*DEHLTV Trigger: AACCGTGAGATGTTCATCCCAGCAGAGAAAGAGACT...GCGAGAGTCCAGAAGCTGAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGAAGGGCCTGGGAGGCTGCAATACGCTGTCGTGGAGGGTAGAGGAGGAAAGTCTCTTTCTCTGCTaGGATGAACATCTCACGGTT | + |
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Preference number: 2 (lower is better) Translates to: MQKGLGGCNTLSWRVEEESLFLC*DEHLTV Trigger: AACCGTGAGATGTTCATCCCAGCAGAGAAAGAGACT...TTCCTCCTCTACCCTCCACGACAGCGTATTGCAGCCTCCCAGGCCCTTCTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCACCTCAGACCCCTGAGTGGGGTTACAGGCATACACCACAACCACTACCACTGGAATTTATTTACTaGGTGGATTCCAGGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: LPPQTPEWGYRHTPQPLPLEFIY*VDSRNV Trigger: GACATTCCTGGAATCCACTCAGTAAATAAATTCCAG...TGGTAGTGGTTGTGGTGTATGCCTGTAACCCCACTCAGGGGTCTGAGGTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGGCTCACACCTACAATCTCAGCACATGATGGGTAGCAGAAGGATGAGTTCAGGTGATACAGGCTTGTaGCCCAGCACTGGAAAGATG | + |
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Preference number: 2 (lower is better) Translates to: SGSHLQSQHMMGSRRMSSGDTGL*PSTGKM Trigger: CATCTTTCCAGTGCTGGGTCACAAGCCTGTATCACC...TGAACTCATCCTTCTGCTACCCATCATGTGCTGAGATTGTAGGTGTGAGCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR-3UTR TCA 90 bp | GCAATAAAACACAGCCCTCCATCAGTGTCCACTGGGAACTGCTTCCAGAACCCTATGAACCTCAAATCCTaGCCCAGTGGAACCAAAACT | + |
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Preference number: 2 (lower is better) Translates to: AIKHSPPSVSTGNCFQNPMNLKS*PSGTKT Trigger: AGTTTTGGTTCCACTGGGTCAGGATTTGAGGTTCAT...AGGGTTCTGGAAGCAGTTCCCAGTGGACACTGATGGAGGGCTGTGTTTTATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGACAAGGTGCAATTAGACAGAAACACCCAGGGCTTTTATATGAACCTCAAACTCAGGCTCACTGACTaGCCCACCCGACATGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TDKVQLDRNTQGFYMNLKLRLTD*PTRHVG Trigger: TCCCACATGTCGGGTGGGTCAGTCAGTGAGCCTGAG...TTTGAGGTTCATATAAAAGCCCTGGGTGTTTCTGTCTAATTGCACCTTGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTATTCTTAGCTCTCTCACTACTCACATCTGTCCTAAGACCTGAAGTTGGAATAGCATGGGAAGCCTaGGGACCCAAATGGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: CLFLALSLLTSVLRPEVGIAWEA*GPKWPS Trigger: TGAAGGCCATTTGGGTCCTCAGGCTTCCCATGCTAT...TCCAACTTCAGGTCTTAGGACAGATGTGAGTAGTGAGAGAGCTAAGAATAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACTGAGTGGATTCCAGGAATGTCTGCTTCCGCATCTGCAAGGCAGCCTCAGCTGGAATTTATTTACTaGGTGGATTCCAGGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: FTEWIPGMSASASARQPQLEFIY*VDSRNV Trigger: GACATTCCTGGAATCCACTCAGTAAATAAATTCCAG...CTGAGGCTGCCTTGCAGATGCGGAAGCAGACATTCCTGGAATCCACTCAGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGTTGAGGGAGTGTAAAACCATTCTACTATATGCTGTATATTTGTGCTTTTGGACTGTCCATCCCTaGGCCTCAGCTTCTGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: QGLRECKTILLYAVYLCFWTVHP*ASASGL Trigger: GAGTCCAGAAGCTGAGGCCCAGGGATGGACAGTCCA...AAAGCACAAATATACAGCATATAGTAGAATGGTTTTACACTCCCTCAACCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATGACTCTGGATTCTCCTGCATTTGTCTATTCTTAGCTCTCTCACTACTCAGAGACGGAGAAACATaGGCTCCAGGAAACATGGTC | + |
|
Preference number: 2 (lower is better) Translates to: QNDSGFSCICLFLALSLLRDGET*APGNMV Trigger: GACCATGTTTCCTGGAGCTCATGTTTCTCCGTCTCT...GAGTAGTGAGAGAGCTAAGAATAGACAAATGCAGGAGAATCCAGAGTCATTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATGACTCTGGATTCTCCTGCATTTGTCTATTCTTAGCTCTCTCACTACTCAAACTAAAACATGTCTaGCTTCCCAGCTGTGTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: QNDSGFSCICLFLALSLLKLKHV*LPSCVP Trigger: GGGGACACAGCTGGGAAGTCAGACATGTTTTAGTTT...GAGTAGTGAGAGAGCTAAGAATAGACAAATGCAGGAGAATCCAGAGTCATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGACAAGGTGCAATTAGACAGAAACACCCAGGGCTTTTATATGAACCTCAAAACAGCTTATACTCTGTaGTTCCACCAGGTGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TDKVQLDRNTQGFYMNLKTAYTL*FHQVVL Trigger: CAGCACCACCTGGTGGAAGCACAGAGTATAAGCTGT...TTTGAGGTTCATATAAAAGCCCTGGGTGTTTCTGTCTAATTGCACCTTGTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGCTCACACCTACAATCTCAGCACATGATGGGTAGCAGAAGGATGAGTTCAGTTACAGGTATTACATaGTTTTCAACTGTGCCTACT | + |
|
Preference number: 2 (lower is better) Translates to: SGSHLQSQHMMGSRRMSSVTGIT*FSTVPT Trigger: AGTAGGCACAGTTGAAAACCATGTAATACCTGTAAC...TGAACTCATCCTTCTGCTACCCATCATGTGCTGAGATTGTAGGTGTGAGCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTAACAGCAACAGACAAGGTGCAATTAGACAGAAACACCCAGGGCTTTTATATCTGGCTGAGTCACACTaGAATTTATTTACTGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PNSNRQGAIRQKHPGLLYLAESH*NLFTEW Trigger: CCACTCAGTAAATAAATTCCAGTGTGACTCAGCCAG...ATATAAAAGCCCTGGGTGTTTCTGTCTAATTGCACCTTGTCTGTTGCTGTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTATTCTTAGCTCTCTCACTACTCACATCTGTCCTAAGACCTGAAGTTGGACCAGCACTGGAAAGATaGAGACAAGATATCAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: CLFLALSLLTSVLRPEVGPALER*RQDIKI Trigger: GATCTTGATATCTTGTCTCCATCTTTCCAGTGCTGG...TCCAACTTCAGGTCTTAGGACAGATGTGAGTAGTGAGAGAGCTAAGAATAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR-3UTR GCA 90 bp | CTATATAGTGAGTTTAAGGCTACCCTCAGCTACACAAGACTGTGTCAAAAGCGGACTGTCCTTAGAATTTaGAAAGATGTGACCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LYSEFKATLSYTRLCQKRTVLRI*KDVTRE Trigger: TTCTCTGGTCACATCTTTGCAAATTCTAAGGACAGT...CCGCTTTTGACACAGTCTTGTGTAGCTGAGGGTAGCCTTAAACTCACTATATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAATGACTCTGGATTCTCCTGCATTTGTCTATTCTTAGCTCTCTCACTACTCCATGGTTTTCAACTGTaGCTACTCTATTCTACCTTA | + |
|
Preference number: 2 (lower is better) Translates to: QNDSGFSCICLFLALSLLHGFQL*LLYSTL Trigger: TAAGGTAGAATAGAGTAGGCACAGTTGAAAACCATG...GAGTAGTGAGAGAGCTAAGAATAGACAAATGCAGGAGAATCCAGAGTCATTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTGAGCCTTGGGTGCAGGTCCCCCTGGGCGCTGAGGAATTGGCAGCTCGGGTAGTACCAATGTCCTaGAAGAGGGGACAGAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGEPWVQVPLGAEELAARVVPMS*KRGQSL Trigger: CAGGCTCTGTCCCCTCTTCAAGGACATTGGTACTAC...CCGAGCTGCCAATTCCTCAGCGCCCAGGGGGACCTGCACCCAAGGCTCACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
||
| 3UTR CCA 72 bp | AGTCCTGCAGCTCCAGGACTCTTAGAGCCTCATGTCTaGGCTACCCAGCTCCTCCTCGATTTGGGGGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SPAAPGLLEPHV*ATQLLLDLGAG Trigger: CCCCGCCCCCAAATCGAGGAGGAGCTGGGTAGCCCAGACATGAGGCTCTAAGAGTCCTGGAGCTGCAGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
||
| 3UTR CCA 72 bp | TCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTaGACCAGCATCTCACCCCTCTGGGATGAAGGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: SERGAPRASRKA*TSISPLWDEGP Trigger: CGGCCCTTCATCCCAGAGGGGTGAGATGCTGGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
||
| 3UTR GCA 72 bp | GGCTCACTGACTGACCCACCCGACATGTGGGAAGTGTaGTTCGGGAACTGGACTGTCCATCCCTGGGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GSLTDPPDMWEV*FGNWTVHPWAS Trigger: TGAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACACTTCCCACATGTCGGGTGGGTCAGTCAGTGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| 3UTR CCA 72 bp | GACCCACCCGACATGTGGGAAGTGTGCTTCGGGAACTaGACTGTCCATCCCTGGGCCTCAGCTTCTGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: DPPDMWEVCFGN*TVHPWASASGL Trigger: GAGTCCAGAAGCTGAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACACTTCCCACATGTCGGGTGGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| 3UTR CCA 72 bp | ATGCAGAAGGGCCTGGGAGGCTGCAATACGCTGTCGTaGAGGGTAGAGGAGGAACTGGCCCAGCAGGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: MQKGLGGCNTLS*RVEEELAQQVQ Trigger: TTGGACCTGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGCGTATTGCAGCCTCCCAGGCCCTTCTGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
||
| 3UTR TCA 72 bp | AGCCTGACAATCATCTCTAAGGCCGGGTGGCACCACTaGGGGGTGGCCCTGGAGAAGGACACAGCTAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLTIISKAGWHH*GVALEKDTASS Trigger: ACTGCTAGCTGTGTCCTTCTCCAGGGCCACCCCTCAGTGGTGCCACCCGGCCTTAGAGATGATTGTCAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| 3UTR TCA 72 bp | CTTCCGCATCTGCAAGGCAGCCTCAGGCTCACTGACTaGCCCACCCGACATGTGGGAAGTGTGCTTCGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LPHLQGSLRLTD*PTRHVGSVLRE Trigger: TTCCCGAAGCACACTTCCCACATGTCGGGTGGGTCAGTCAGTGAGCCTGAGGCTGCCTTGCAGATGCGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| 3UTR CCA 72 bp | GCGAGCAGGAAGGCCTGGACCAGCATCTCACCCCTCTaGGATGAAGGGCCGAATCAGTTCTGGGTTCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: ASRKAWTSISPL*DEGPNQFWVQQ Trigger: CTGTTGAACCCAGAACTGATTCGGCCCTTCATCCCAGAGGGGTGAGATGCTGGTCCAGGCCTTCCTGCTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| 3UTR TCA 72 bp | GATGGATGGGCAGGCAGAGGCGCTGTGAAGAAGTACTaGTGCAGAAGGGCCTGGGAGGCTGCAATACGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DGWAGRGAVKKY*CRRAWEAAIRC Trigger: ACAGCGTATTGCAGCCTCCCAGGCCCTTCTGCATCAGTACTTCTTCACAGCGCCTCTGCCTGCCCATCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
||
| 3UTR CCA 72 bp | TGGGAAGTGTGCTTCGGGAACTGGACTGTCCATCCCTaGGCCTCAGCTTCTGGACTCTCGCTCCCAAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: WEVCFGNWTVHP*ASASGLSLPNE Trigger: CTCATTTGGGAGCGAGAGTCCAGAAGCTGAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACACTTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCCCGGGAACACAGCTCCTCCTCGATTaGGGGGCGGGGCATAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: PGCEAHSTVVQCRFRPGTQLLLD*GAGHKC Trigger: GCATTTATGCCCCGCCCCCAAATCGAGGAGGAGCTG...TGTTCCCGGGCGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
||
| 3UTR TCA 72 bp | CTGAGGACCCAAATGGCCTTCACAGGAGGCCTCTTCTaGGTACCTGACCCCTGTGAATCAAGGCCCACCATT | + |
|
Preference number: 3 (lower is better) Translates to: LRTQMAFTGGLF*VPDPCESRPTI Trigger: AATGGTGGGCCTTGATTCACAGGGGTCAGGTACTCAGAAGAGGCCTCCTGTGAAGGCCATTTGGGTCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| 3UTR GCA 72 bp | TGTGAAGAAGTACTGATGCAGAAGGGCCTGGGAGGCTaGAATACGCTGTCGTGGAGGGTAGAGGAGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: CEEVLMQKGLGG*NTLSWRVEEEL Trigger: CAGTTCCTCCTCTACCCTCCACGACAGCGTATTGCAGCCTCCCAGGCCCTTCTGCATCAGTACTTCTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| 3UTR CCA 72 bp | CTACTCTTAGGAACCCTCCCACCTCAGACCCCTGAGTaGGGTTACAGGCATACACCACAACCACTACCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLLGTLPPQTPE*GYRHTPQPLPD Trigger: ATCTGGTAGTGGTTGTGGTGTATGCCTGTAACCCCACTCAGGGGTCTGAGGTGGGAGGGTTCCTAAGAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR CCA 72 bp | CAGATAAAACCTGTCCCTCCTGCAGCGCCAAGACTTTaGTCTTCATTGGTCAAGAGGGAGTGGGGCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QIKPVPPAAPRL*SSLVKREWGPR Trigger: TCTTGGGCCCCACTCCCTCTTGACCAATGAAGACCAAAGTCTTGGCGCTGCAGGAGGGACAGGTTTTATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
||
| 3UTR TCA 72 bp | TGGGATGAAGGGCCGAATCAGTTCTGGGTTCAACAGTaGCTCCTCAAGAGGTCGATCCACATGGAAGTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: WDEGPNQFWVQQ*LLKRSIHMEVV Trigger: CACGACTTCCATGTGGATCGACCTCTTGAGGAGTCACTGTTGAACCCAGAACTGATTCGGCCCTTCATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| 3UTR TCA 72 bp | TGCAGAGTACCTGTCCAGCACACACAATCCCAGCACTaGAGACTCCAGAATCAGTGGCTCACACCTACAATC | + |
|
Preference number: 3 (lower is better) Translates to: CRVPVQHTQSQH*RLQNQWLTPTI Trigger: GATTGTAGGTGTGAGCCACTGATTCTGGAGTCTTCAGTGCTGGGATTGTGTGTGCTGGACAGGTACTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR CCA 72 bp | GACATCGCAGGATCTAGACCAGTGGTTCTCATCCTGTaGGTCTTGACCCCCTTGGGAATCACATGTGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: DIAGSRPVVLIL*VLTPLGITCEI Trigger: TATCTCACATGTGATTCCCAAGGGGGTCAAGACCCACAGGATGAGAACCACTGGTCTAGATCCTGCGATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR CCA 72 bp | CACTGCAATAAAACACAGCCCTCCATCAGTGTCCACTaGGAACTGCTTCCAGAACCCTGCAGAATGACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HCNKTQPSISVH*ELLPEPCRMTL Trigger: CAGAGTCATTCTGCAGGGTTCTGGAAGCAGTTCCCAGTGGACACTGATGGAGGGCTGTGTTTTATTGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR-3UTR CAA 90 bp | AGTGGCTCACACCTACAATCTCAGCACATGATGGGTAGCAGAAGGATGAGTTCAGTAGTACCAATGTCCTaGAAGAGGGGACAGAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SGSHLQSQHMMGSRRMSSVVPMS*KRGQSL Trigger: CAGGCTCTGTCCCCTCTTCAAGGACATTGGTACTAC...TGAACTCATCCTTCTGCTACCCATCATGTGCTGAGATTGTAGGTGTGAGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR GCA 72 bp | TCCATCAGTGTCCACTGGGAACTGCTTCCAGAACCCTaGAGAATGACTCTGGATTCTCCTGCATTTGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SISVHWELLPEP*RMTLDSPAFVY Trigger: ATAGACAAATGCAGGAGAATCCAGAGTCATTCTGCAGGGTTCTGGAAGCAGTTCCCAGTGGACACTGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGCTCACACCTACAATCTCAGCACATGATGGGTAGCAGAAGGATGAGTTCACCCCAGCAATTGCCTTaGTCTGCTTTGATATCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SGSHLQSQHMMGSRRMSSPQQLP*SALISN Trigger: GTTTGATATCAAAGCAGACAAAGGCAATTGCTGGGG...TGAACTCATCCTTCTGCTACCCATCATGTGCTGAGATTGTAGGTGTGAGCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR TCA 72 bp | CAAAGGGAGTTCAAAGCCGACCTTATCTTCTCATCTTaGAAAGATCAAGCCAGACAGGGGTTGAGGGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QREFKADLIFSS*KDQARQGLREC Trigger: ACACTCCCTCAACCCCTGTCTGGCTTGATCTTTTCAAGATGAGAAGATAAGGTCGGCTTTGAACTCCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR CCA 72 bp | AAGCTGGCTGAGTCACACTGGAATTTATTTACTGAGTaGATTCCAGGAATGTCTGCTTCCGCATCTGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KLAESHWNLFTE*IPGMSASASAR Trigger: CCTTGCAGATGCGGAAGCAGACATTCCTGGAATCCACTCAGTAAATAAATTCCAGTGTGACTCAGCCAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR CCA 72 bp | TGTGGTTACTGCACCGTCTCTAGTGAGTCCACCATCTaGAAACCCACAGATGTTTTCTGTTCCTTTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: CGYCTVSSESTI*KPTDVFCSFHC Trigger: ACAGTGAAAGGAACAGAAAACATCTGTGGGTTTCCAGATGGTGGACTCACTAGAGACGGTGCAGTAACCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR GCA 72 bp | GCTTCCAGAACCCTGCAGAATGACTCTGGATTCTCCTaGATTTGTCTATTCTTAGCTCTCTCACTACTCACA | + |
|
Preference number: 3 (lower is better) Translates to: ASRTLQNDSGFS*ICLFLALSLLT Trigger: TGTGAGTAGTGAGAGAGCTAAGAATAGACAAATGCAGGAGAATCCAGAGTCATTCTGCAGGGTTCTGGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR GCA 72 bp | ACTGGAAAGATGGAGACAAGATATCAAGATCATCTCTaGCACAAAGGGAGTTCAAAGCCGACCTTATCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TGKMETRYQDHL*HKGSSKPTLSS Trigger: AGAAGATAAGGTCGGCTTTGAACTCCCTTTGTGGCAGAGATGATCTTGATATCTTGTCTCCATCTTTCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR CCA 72 bp | ACCACCTGTGTGTACGTAAGAGCTACAAGAAGTCAATaGAGCTCAACTGTCCTTAGAATTTGCAAAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: TTCVYVRATRSQ*SSTVLRICKDV Trigger: CACATCTTTGCAAATTCTAAGGACAGTTGAGCTCCATTGACTTCTTGTAGCTCTTACGTACACACAGGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR-3UTR CAA 90 bp | CTATATAGTGAGTTTAAGGCTACCCTCAGCTACACAAGACTGTGTCAAAAGCGGCCTTATCTTCTCATCTaGAAAAGATCAAGCCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LYSEFKATLSYTRLCQKRPYLLI*KRSSQT Trigger: TGTCTGGCTTGATCTTTTCAAGATGAGAAGATAAGG...CCGCTTTTGACACAGTCTTGTGTAGCTGAGGGTAGCCTTAAACTCACTATATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR GCA 72 bp | ACAAGAAGTCAATGGAGCTCAACTGTCCTTAGAATTTaGAAAGATGTGACCAGAGAAATAAACAGAGGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: TRSQWSSTVLRI*KDVTREINRGR Trigger: CCGACCTCTGTTTATTTCTCTGGTCACATCTTTGCAAATTCTAAGGACAGTTGAGCTCCATTGACTTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR CCA 72 bp | CCCTATGAAATAAAACACAAGCTGGCTGAGTCACACTaGAATTTATTTACTGAGTGGATTCCAGGAATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PYEIKHKLAESH*NLFTEWIPGMS Trigger: AGACATTCCTGGAATCCACTCAGTAAATAAATTCCAGTGTGACTCAGCCAGCTTGTGTTTTATTTCATAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGCAGGTCCAAGGCCTGGGGAGGCTCTTGACTTGTGCTaGGGCCAGGGGCCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVVEGRGGTGPAGPRPGEALDLC*GQGPLG Trigger: GCCCAGAGGCCCCTGGCCCCAGCACAAGTCAAGAGC...CTCCCCAGGCCTTGGACCTGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCTTCGGGAACTGGACTGTCCATCCCTGGGCCTCAGCTTCTGGACTCTCGCGCCCTGGGTGAGCCTTaGGTGCAGGTCCCCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CASGTGLSIPGPQLLDSRALGEP*VQVPLG Trigger: GCCCAGGGGGACCTGCACCCAAGGCTCACCCAGGGC...GCGAGAGTCCAGAAGCTGAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGGGCCAGGGGCCTCTaGGCATGGCGCACCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EAMEANQKEVLLGRAGRPGARGL*AWRTTS Trigger: AGAGGTGGTGCGCCATGCCCAGAGGCCCCTGGCCCC...AGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | CATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCGCCCTGGGTGAGCCTTaGGTGCAGGTCCCCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGGKSERGAPRASRKAWTALGEP*VQVPLG Trigger: GCCCAGGGGGACCTGCACCCAAGGCTCACCCAGGGC...GGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
||
| CDS-3UTR CCA 90 bp | ACCCGACATGTGGGAAGTGTGCTTCGGGAACTGGACTGTCCATCCCTGGGCCTCGCTCTTGACTTGTGCTaGGGCCAGGGGCCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TRHVGSVLRELDCPSLGLALDLC*GQGPLG Trigger: GCCCAGAGGCCCCTGGCCCCAGCACAAGTCAAGAGC...GAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACACTTCCCACATGTCGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCAGCGGCAGCTCGGATGGATaGGCAGGCAGAGGCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGKSERGAPRASRKAWTSGSSDG*AGRGAV Trigger: CACAGCGCCTCTGCCTGCCCATCCATCCGAGCTGCC...GCTGGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
||
| CDS-3UTR GCA 90 bp | GGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGGGGCGCCCTCCCCGATaGGACCGAGGATGCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: GHGGKSERGAPRASRKAWGRPPR*DRGCNT Trigger: AGTATTGCATCCTCGGTCGCATCGGGGAGGGCGCCC...CCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGAGGCTGCAATACGCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGGAGCTCGGTACCACCTaGTGGCCACCTGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGGCNTLSWRVEEELAQELGTT*WPPDVC Trigger: ACACACATCAGGTGGCCACCAGGTGGTACCGAGCTC...CTGGGCCAGTTCCTCCTCTACCCTCCACGACAGCGTATTGCAGCCTCCCAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | GAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGGTGCAGGTCCCCCTaGGCGCTGAGGAATTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EAMEANQKEVLLGRAGRPGCRSP*ALRNWQ Trigger: CTGCCAATTCCTCAGCGCCCAGGGGGACCTGCACCC...AGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
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| CDS-3UTR CCA 90 bp | GCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGAGGGTGCAGGTCCCCCTaGGCGCTGAGGAATTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AMEANQKEVLLGRAGRPGGCRSP*ALRNWQ Trigger: CTGCCAATTCCTCAGCGCCCAGGGGGACCTGCACCC...TCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
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| CDS-3UTR TCA 90 bp | CCCTGGGCCTCAGCTTCTGGACTCTCGCTCCCAAATGAGCACTCAAGTCCCGTGGCAAGGCCACCTTCTTaGGGGCAACGATCTCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PWASASGLSLPNEHSSPVARPPS*GQRSRQ Trigger: CTGGCGAGATCGTTGCCCTCAAGAAGGTGGCCTTGC...CACGGGACTTGAGTGCTCATTTGGGAGCGAGAGTCCAGAAGCTGAGGCCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| CDS-3UTR GCA 90 bp | GCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGCAGGTCCAAGGCCTGGGGAGGGCTTCAGGTCCCGATaGACAATGTTGTTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: AVVEGRGGTGPAGPRPGEGFRSR*TMLLAW Trigger: CCATGCCAACAACATTGTGCATCGGGACCTGAAGCC...CTCCCCAGGCCTTGGACCTGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR GCA 90 bp | GGAGGCTGCAATACGCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGCAGGTCACGCCCTGGTCATACTaGCGAGCGCCATACAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGCNTLSWRVEEELAQQVTPWSY*RAPYRS Trigger: ACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGT...GACCTGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGCGTATTGCAGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| CDS-3UTR CCA 90 bp | GGGGTGGCCCTGGAGAAGGACACAGTAAGGAGCAGGACCAGGTGTGGTATATATAGGGGCCTCTGGGCATaGCGCACCACCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVALEKDTVRSRTRCGIYRGLWA*RTTSAR Trigger: CCTGGCAGAGGTGGTGCGCCATGCCCAGAGGCCCCT...ATATATACCACACCTGGTCCTGCTCCTTACTGTGTCCTTCTCCAGGGCCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222562.2 |
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| CDS-3UTR CCA 90 bp | GGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCCCGAGGGGCCTCTGGGCATaGCGCACCACCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GYPGCEAHSTVVQCRFRPRGLWA*RTTSAR Trigger: CCTGGCAGAGGTGGTGCGCCATGCCCAGAGGCCCCT...CGGGCGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTAGCAGGTCCAAGGCCTaGGGAGAGGCATCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EAMEANQKEVLLGRAGRPSRSKA*GEASGS Trigger: GCTGCCTGATGCCTCTCCCCAGGCCTTGGACCTGCT...AGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
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| CDS-3UTR TCA 90 bp | CATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCCTACGTGCTTGGCTTTaGAGACGATGCCGTGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HGGKSERGAPRASRKAWTLRAWL*RRCRGR Trigger: GCGCCCACGGCATCGTCTTCAAAGCCAAGCACGTAG...GGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| CDS-3UTR TCA 90 bp | CCTTGGGTGCAGGTCCCCCTGGGCGCTGAGGAATTGGCAGCTCGGATGGATGGGAAAACGCAACACCTTTaGGCAGCATCTGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PWVQVPLGAEELAARMDGKTQHL*AASAGS Trigger: GCTACCTGCAGATGCTGCTCAAAGGTGTTGCGTTTT...CCCATCCATCCGAGCTGCCAATTCCTCAGCGCCCAGGGGGACCTGCACCCAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGCGCTGTGAAGAAGTACTGATGCAGAAGGGCCTGGGAGGCTGCAATACGGGGCGCCCTCCCCGATaGGACCGAGGATGCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: QRRCEEVLMQKGLGGCNTGRPPR*DRGCNT Trigger: AGTATTGCATCCTCGGTCGCATCGGGGAGGGCGCCC...CGTATTGCAGCCTCCCAGGCCCTTCTGCATCAGTACTTCTTCACAGCGCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCCCGGGAACAAGGGGCCTCTGGGCATaGCGCACCACCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGCEAHSTVVQCRFRPGTRGLWA*RTTSAR Trigger: CCTGGCAGAGGTGGTGCGCCATGCCCAGAGGCCCCT...TGTTCCCGGGCGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | ACCAGCATCTCACCCCTCTGGGATGAAGGGCCGAATCAGTTCTGGGTTCAACAGGCTCTTGACTTGTGCTaGGGCCAGGGGCCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSISPLWDEGPNQFWVQQALDLC*GQGPLG Trigger: GCCCAGAGGCCCCTGGCCCCAGCACAAGTCAAGAGC...CTGTTGAACCCAGAACTGATTCGGCCCTTCATCCCAGAGGGGTGAGATGCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| CDS-3UTR GCA 90 bp | CAATACGCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGCAGGTCCAAGGCCTATGGCGCACCACCTCTaGCAGGTCCGACAGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QYAVVEGRGGTGPAGPRPMAHHL*QVRQHK Trigger: TTTATGCTGTCGGACCTGGCAGAGGTGGTGCGCCAT...AGGCCTTGGACCTGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGCGTATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR GCA 90 bp | GCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGAACGCCCTGGTCATACTaGCGAGCGCCATACAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AMEANQKEVLLGRAGRPGTPWSY*RAPYRS Trigger: ACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGT...TCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021939.8 ENSMUST00000222470.2 ENSMUST00000222562.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| CDS-3UTR GCA 90 bp | GGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCAGCATCACGCCCTGGTCATACTaGCGAGCGCCATACAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKSERGAPRASRKAWTSITPWSY*RAPYRS Trigger: ACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGT...GATGCTGGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021939.8 ENSMUST00000222470.2 ENSMUST00000222562.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| CDS-3UTR GCA 90 bp | GGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCAGCTCGGGGTACCCAGGATaGGAAGCACACAGCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGKSERGAPRASRKAWTSSGYPG*EAHSTV Trigger: AACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGA...GCTGGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
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| CDS-3UTR GCA 90 bp | TCCGGCCAGACTCGAGGACTCGGGGTACCCAGGATGCGAAGCACACAGCACAGTCACCTGGACAGAAGGTaGAGACGTATCTCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGQTRGLGVPRMRSTQHSHLDRR*RRISSP Trigger: TGGGGAAGAGATACGTCTGCACCTTCTGTCCAGGTG...ACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAGTCCTCGAGTCTGGCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223419.2 |
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| CDS-3UTR CCA 90 bp | GTGGCCCTGGAGAAGGACACAGTAAGGAGCAGGACCAGGTGTGGTATATATAGCGCTCTTGACTTGTGCTaGGGCCAGGGGCCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VALEKDTVRSRTRCGIYSALDLC*GQGPLG Trigger: GCCCAGAGGCCCCTGGCCCCAGCACAAGTCAAGAGC...GCTATATATACCACACCTGGTCCTGCTCCTTACTGTGTCCTTCTCCAGGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222562.2 |
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| CDS-3UTR CCA 90 bp | CCCTGGGTGAGCCTTGGGTGCAGGTCCCCCTGGGCGCTGAGGAATTGGCAGCTCGATGCACAATGTTGTTaGCATGGCAAAACGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: PWVSLGCRSPWALRNWQLDAQCC*HGKTQH Trigger: GTGTTGCGTTTTGCCATGCCAACAACATTGTGCATC...GAGCTGCCAATTCCTCAGCGCCCAGGGGGACCTGCACCCAAGGCTCACCCAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGGCTGCAATACGCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGCATCAGCTATCTTGAGCTaGCCTGAGGCACTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGRLQYAVVEGRGGTGPASAILS*PEALMS Trigger: GCTCATCAGTGCCTCAGGCCAGCTCAAGATAGCTGA...TGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGCGTATTGCAGCCTCCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | GGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCAGCATCGAGCTCGGTACCACCTaGTGGCCACCTGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKSERGAPRASRKAWTSIELGTT*WPPDVC Trigger: ACACACATCAGGTGGCCACCAGGTGGTACCGAGCTC...GATGCTGGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222470.2 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| CDS-3UTR TCA 90 bp | CGGGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCCCTACGTGCTTGGCTTTaGAGACGATGCCGTGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGTQDAKHTAQLFNVVFALRAWL*RRCRGR Trigger: GCGCCCACGGCATCGTCTTCAAAGCCAAGCACGTAG...GGCGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR TCA 90 bp | GGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCCCGCTACGTGCTTGGCTTTaGAGACGATGCCGTGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GYPGCEAHSTVVQCRFRPLRAWL*RRCRGR Trigger: GCGCCCACGGCATCGTCTTCAAAGCCAAGCACGTAG...CGGGCGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR TCA 90 bp | GGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCAGCTATCTTGAGCTGGCCTaGGGCACTGATGAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGKSERGAPRASRKAWTSYLELA*GTDEQV Trigger: AACCTGCTCATCAGTGCCTCAGGCCAGCTCAAGATA...GCTGGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222470.2 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| CDS-3UTR TCA 90 bp | CAATACGCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGCAGGTCCAAGGCCTTATCTTGAGCTGGCCTaGGGCACTGATGAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QYAVVEGRGGTGPAGPRPYLELA*GTDEQV Trigger: AACCTGCTCATCAGTGCCTCAGGCCAGCTCAAGATA...AGGCCTTGGACCTGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGCGTATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR TCA 90 bp | GGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCAGCATCGCTGTGAAGAAGTACTaGTGCAGAAGGGCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKSERGAPRASRKAWTSIAVKKY*CRRAWE Trigger: CTCCCAGGCCCTTCTGCATCAGTACTTCTTCACAGC...GATGCTGGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
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| CDS-3UTR TCA 90 bp | TGTGCTTCGGGAACTGGACTGTCCATCCCTGGGCCTCAGCTTCTGGACTCTCGCCAGGCAGAGGCGCTGTaGAGAAGTACTGATGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CASGTGLSIPGPQLLDSRQAEAL*RSTDAE Trigger: TTCTGCATCAGTACTTCTTCACAGCGCCTCTGCCTG...GCGAGAGTCCAGAAGCTGAGGCCCAGGGATGGACAGTCCAGTTCCCGAAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| CDS-3UTR GCA 90 bp | AGAAGTACTGATGCAGAAGGGCCTGGGAGGCTGCAATACGCTGTCGTGGAGGGTACGCCCTGGTCATACTaGCGAGCGCCATACAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSTDAEGPGRLQYAVVEGTPWSY*RAPYRS Trigger: ACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGT...ACCCTCCACGACAGCGTATTGCAGCCTCCCAGGCCCTTCTGCATCAGTACTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 ENSMUST00000223419.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTCAGCTATCTTGAGCTaGCCTGAGGCACTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGHGGKSERGAPRASRKASAILS*PEALMS Trigger: GCTCATCAGTGCCTCAGGCCAGCTCAAGATAGCTGA...GGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222470.2 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | GGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGTGCAATACGCTGTCGTaGAGGGTAGAGGAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GHGGKSERGAPRASRKAWCNTLS*RVEEEL Trigger: CAGTTCCTCCTCTACCCTCCACGACAGCGTATTGCA...CCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
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| CDS-3UTR TCA 90 bp | CAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCCCGGGAACAGGCAAGGCCACCTTCTTaGGGGCAACGATCTCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDAKHTAQLFNVVFAREQARPPS*GQRSRQ Trigger: CTGGCGAGATCGTTGCCCTCAAGAAGGTGGCCTTGC...CTGTTCCCGGGCGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR TCA 90 bp | GCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGATATCTTGAGCTGGCCTaGGGCACTGATGAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AMEANQKEVLLGRAGRPGYLELA*GTDEQV Trigger: AACCTGCTCATCAGTGCCTCAGGCCAGCTCAAGATA...TCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222470.2 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| CDS-3UTR TCA 90 bp | CATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCCAGGCAGAGGCGCTGTaGAGAAGTACTGATGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGGKSERGAPRASRKAWTQAEAL*RSTDAE Trigger: TTCTGCATCAGTACTTCTTCACAGCGCCTCTGCCTG...GGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGATTCCAGGAATGTCTGCTTCCGCATCTGCAAGGCAGCCTCAGGCTCACTACGCCCTGGTCATACTaGCGAGCGCCATACAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGFQECLLPHLQGSLRLTTPWSY*RAPYRS Trigger: ACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGT...AGTGAGCCTGAGGCTGCCTTGCAGATGCGGAAGCAGACATTCCTGGAATCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCATCTCACCCCTCTGGGATGAAGGGCCGAATCAGTTCTGGGTTCAACAGGAGCTCGGTACCACCTaGTGGCCACCTGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSISPLWDEGPNQFWVQQELGTT*WPPDVC Trigger: ACACACATCAGGTGGCCACCAGGTGGTACCGAGCTC...CTGTTGAACCCAGAACTGATTCGGCCCTTCATCCCAGAGGGGTGAGATGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCTGGAGAAGGACACAGTAAGGAGCAGGACCAGGTGTGGTATATATAGCCTCCTCCAGGGGCACTaGTGCCTGCTCCTTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VALEKDTVRSRTRCGIYSLLQGH*CLLLEG Trigger: TCCTTCAAGGAGCAGGCACCAGTGCCCCTGGAGGAG...GCTATATATACCACACCTGGTCCTGCTCCTTACTGTGTCCTTCTCCAGGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222562.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTTGCAATACGCTGTCGTaGAGGGTAGAGGAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: EAMEANQKEVLLGRAGRPCNTLS*RVEEEL Trigger: CAGTTCCTCCTCTACCCTCCACGACAGCGTATTGCA...AGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
||
| 3UTR CAA 72 bp | CCTGTCCCTCCTGCAGCGCCAAGACTTTGGTCTTCATaGGTCAAGAGGGAGTGGGGCCCAAGACACCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: PVPPAAPRLWSS*VKREWGPRHLH Trigger: ATGTAGGTGTCTTGGGCCCCACTCCCTCTTGACCAATGAAGACCAAAGTCTTGGCGCTGCAGGAGGGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
||
| CDS-3UTR TCA 90 bp | GCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGAAGCTGCACCACATATTaGCTGTCCTCTATCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AMEANQKEVLLGRAGRPGSCTTY*LSSISC Trigger: GCAGGAGATAGAGGACAGTCAATATGTGGTGCAGCT...TCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCAGCATCAAAACGCAACACCTTTaGGCAGCATCTGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKSERGAPRASRKAWTSIKTQHL*AASAGS Trigger: GCTACCTGCAGATGCTGCTCAAAGGTGTTGCGTTTT...GATGCTGGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTTTCTGGGTTCAACAGTaGCTCCTCAAGAGGTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: EAMEANQKEVLLGRAGRPFWVQQ*LLKRSI Trigger: GATCGACCTCTTGAGGAGTCACTGTTGAACCCAGAA...AGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
||
| CDS-3UTR GCA 90 bp | GGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGCTGTCCTCTATCTCCTaGAGAGCCTTGATTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHGGKSERGAPRASRKAWLSSIS*RALISL Trigger: CAGAGAAATCAAGGCTCTGCAGGAGATAGAGGACAG...CCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCAGCCTGTCCTCTATCTCCTaGAGAGCCTTGATTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGKSERGAPRASRKAWTSLSSIS*RALISL Trigger: CAGAGAAATCAAGGCTCTGCAGGAGATAGAGGACAG...GCTGGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| CDS-3UTR GCA 90 bp | CTGCAATACGCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGCAGGTCCAAGGCTGTCCTCTATCTCCTaGAGAGCCTTGATTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQYAVVEGRGGTGPAGPRLSSIS*RALISL Trigger: CAGAGAAATCAAGGCTCTGCAGGAGATAGAGGACAG...CCTTGGACCTGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGCGTATTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | TACGCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGCAGGTCCAAGGCCTGGGACAATGTTGTTGGCATaGCAAAACGCAACACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YAVVEGRGGTGPAGPRPGTMLLA*QNATPL Trigger: CAAAGGTGTTGCGTTTTGCCATGCCAACAACATTGT...CCCAGGCCTTGGACCTGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGCGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | CTCCCACCTCAGACCCCTGAGTGGGGTTACAGGCATACACCACAACCACTACCATCAGCTATCTTGAGCTaGCCTGAGGCACTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPQTPEWGYRHTPQPLPSAILS*PEALMS Trigger: GCTCATCAGTGCCTCAGGCCAGCTCAAGATAGCTGA...TGGTAGTGGTTGTGGTGTATGCCTGTAACCCCACTCAGGGGTCTGAGGTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| 3UTR CAA 72 bp | CCAGATAAAACCTGTCCCTCCTGCAGCGCCAAGACTTaGGTCTTCATTGGTCAAGAGGGAGTGGGGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PDKTCPSCSAKT*VFIGQEGVGPK Trigger: CTTGGGCCCCACTCCCTCTTGACCAATGAAGACCAAAGTCTTGGCGCTGCAGGAGGGACAGGTTTTATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| CDS-3UTR TCA 90 bp | CTCCCACCTCAGACCCCTGAGTGGGGTTACAGGCATACACCACAACCACTACCATTCTGGGTTCAACAGTaGCTCCTCAAGAGGTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: LPPQTPEWGYRHTPQPLPFWVQQ*LLKRSI Trigger: GATCGACCTCTTGAGGAGTCACTGTTGAACCCAGAA...TGGTAGTGGTTGTGGTGTATGCCTGTAACCCCACTCAGGGGTCTGAGGTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAGGACACAGTAAGGAGCAGGACCAGGTGTGGTATATATAGCCGTGGGGAGATGGCGCACCACCTCTaGCAGGTCCGACAGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKDTVRSRTRCGIYSRGEMAHHL*QVRQHK Trigger: TTTATGCTGTCGGACCTGGCAGAGGTGGTGCGCCAT...CTCCCCACGGCTATATATACCACACCTGGTCCTGCTCCTTACTGTGTCCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222562.2 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCCCGGGAAATGGCGCACCACCTCTaGCAGGTCCGACAGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQDAKHTAQLFNVVFAREMAHHL*QVRQHK Trigger: TTTATGCTGTCGGACCTGGCAGAGGTGGTGCGCCAT...TTCCCGGGCGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR GCA 90 bp | GAGGACTCGGGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTGGCTTCAGGTCCCGATaGACAATGTTGTTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EDSGYPGCEAHSTVVQCRGFRSR*TMLLAW Trigger: CCATGCCAACAACATTGTGCATCGGGACCTGAAGCC...ACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAGTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR GCA 90 bp | TCGAGGACTCGGGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGGCTTCAGGTCCCGATaGACAATGTTGTTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTRGTQDAKHTAQLFNVGFRSR*TMLLAW Trigger: CCATGCCAACAACATTGTGCATCGGGACCTGAAGCC...GACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAGTCCTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCCCTGGAGAAGGACACAGTAAGGAGCAGGACCAGGTGTGGTATATATAGCTCGGGGTACCCAGGATaGGAAGCACACAGCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VALEKDTVRSRTRCGIYSSGYPG*EAHSTV Trigger: AACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGA...GCTATATATACCACACCTGGTCCTGCTCCTTACTGTGTCCTTCTCCAGGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222562.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCGATGCACAATGTTGTTaGCATGGCAAAACGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GGHGGKSERGAPRASRKADAQCC*HGKTQH Trigger: GTGTTGCGTTTTGCCATGCCAACAACATTGTGCATC...GGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCCCGGGAACTCAGCTATCTTGAGCTaGCCTGAGGCACTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRMRSTQHSCSMSFSPGNSAILS*PEALMS Trigger: GCTCATCAGTGCCTCAGGCCAGCTCAAGATAGCTGA...GTTCCCGGGCGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | CACCCCTCTGGGATGAAGGGCCGAATCAGTTCTGGGTTCAACAGTGACTCCTCATCAGCTATCTTGAGCTaGCCTGAGGCACTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPSGMKGRISSGFNSDSSSAILS*PEALMS Trigger: GCTCATCAGTGCCTCAGGCCAGCTCAAGATAGCTGA...TGAGGAGTCACTGTTGAACCCAGAACTGATTCGGCCCTTCATCCCAGAGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 |
||
| CDS-3UTR TCA 90 bp | GAGGACTCGGGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTAGCTGCACCACATATTaGCTGTCCTCTATCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EDSGYPGCEAHSTVVQCRSCTTY*LSSISC Trigger: GCAGGAGATAGAGGACAGTCAATATGTGGTGCAGCT...ACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTGGAGAAGGACACAGCTAGCAGTTTCTGGAGGCTTTGTCTGTAGGACGAAAACGCAACACCTTTaGGCAGCATCTGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WPWRRTQLAVSGGFVCRTKTQHL*AASAGS Trigger: GCTACCTGCAGATGCTGCTCAAAGGTGTTGCGTTTT...CGTCCTACAGACAAAGCCTCCAGAAACTGCTAGCTGTGTCCTTCTCCAGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| CDS-3UTR TCA 90 bp | TCGAGGACTCGGGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCAAAACGCAACACCTTTaGGCAGCATCTGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRTRGTQDAKHTAQLFNVKTQHL*AASAGS Trigger: GCTACCTGCAGATGCTGCTCAAAGGTGTTGCGTTTT...GACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAGTCCTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGCCCTGGAGAAGGACACAGTAAGGAGCAGGACCAGGTGTGGTATATATCTGGTGCCTGCTCCTTaGAGGAGATCTTGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVALEKDTVRSRTRCGIYLVPAP*RRSCCS Trigger: ACTACAACAAGATCTCCTTCAAGGAGCAGGCACCAG...ATATATACCACACCTGGTCCTGCTCCTTACTGTGTCCTTCTCCAGGGCCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222562.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAGGACACAGTAAGGAGCAGGACCAGGTGTGGTATATATAGCCGTGGGGAGGGCTTCAGGTCCCGATaGACAATGTTGTTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EKDTVRSRTRCGIYSRGEGFRSR*TMLLAW Trigger: CCATGCCAACAACATTGTGCATCGGGACCTGAAGCC...CTCCCCACGGCTATATATACCACACCTGGTCCTGCTCCTTACTGTGTCCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222562.2 |
||
| CDS-3UTR CCA 90 bp | GCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGAGATGCACAATGTTGTTaGCATGGCAAAACGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AMEANQKEVLLGRAGRPGDAQCC*HGKTQH Trigger: GTGTTGCGTTTTGCCATGCCAACAACATTGTGCATC...TCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| CDS-3UTR TCA 90 bp | GGACTCGGGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTAGCTGCACCACATATTaGCTGTCCTCTATCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGVPRMRSTQHSCSMSFSCTTY*LSSISC Trigger: GCAGGAGATAGAGGACAGTCAATATGTGGTGCAGCT...AAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | ACAGACAAGGTGCAATTAGACAGAAACACCCAGGGCTTTTATATGAACCTCAAAAGGGGCCTCTGGGCATaGCGCACCACCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDKVQLDRNTQGFYMNLKRGLWA*RTTSAR Trigger: CCTGGCAGAGGTGGTGCGCCATGCCCAGAGGCCCCT...TTTGAGGTTCATATAAAAGCCCTGGGTGTTTCTGTCTAATTGCACCTTGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | GAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTACAATGTTGTTGGCATaGCAAAACGCAACACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EAMEANQKEVLLGRAGRPTMLLA*QNATPL Trigger: CAAAGGTGTTGCGTTTTGCCATGCCAACAACATTGT...AGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | AGTGGCTCACACCTACAATCTCAGCACATGATGGGTAGCAGAAGGATGAGTTCAGAGCTCGGTACCACCTaGTGGCCACCTGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSHLQSQHMMGSRRMSSELGTT*WPPDVC Trigger: ACACACATCAGGTGGCCACCAGGTGGTACCGAGCTC...TGAACTCATCCTTCTGCTACCCATCATGTGCTGAGATTGTAGGTGTGAGCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| CDS-3UTR CCA 90 bp | AACACAAGCTGGCTGAGTCACACTGGAATTTATTTACTGAGTGGATTCCAGGAAGGCAGCTCGGATGGATaGGCAGGCAGAGGCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTSWLSHTGIYLLSGFQEGSSDG*AGRGAV Trigger: CACAGCGCCTCTGCCTGCCCATCCATCCGAGCTGCC...TTCCTGGAATCCACTCAGTAAATAAATTCCAGTGTGACTCAGCCAGCTTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| CDS-3UTR TCA 90 bp | ATCAGTTCTGGGTTCAACAGTGACTCCTCAAGAGGTCGATCCACATGGAAGTCGTATCTTGAGCTGGCCTaGGGCACTGATGAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISSGFNSDSSRGRSTWKSYLELA*GTDEQV Trigger: AACCTGCTCATCAGTGCCTCAGGCCAGCTCAAGATA...CGACTTCCATGTGGATCGACCTCTTGAGGAGTCACTGTTGAACCCAGAACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 |
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| CDS-3UTR TCA 90 bp | GCAATAAAACACAGCCCTCCATCAGTGTCCACTGGGAACTGCTTCCAGAACCCTCTGGTGCCTGCTCCTTaGAGGAGATCTTGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AIKHSPPSVSTGNCFQNPLVPAP*RRSCCS Trigger: ACTACAACAAGATCTCCTTCAAGGAGCAGGCACCAG...AGGGTTCTGGAAGCAGTTCCCAGTGGACACTGATGGAGGGCTGTGTTTTATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| CDS-3UTR TCA 90 bp | AGTGGCTCACACCTACAATCTCAGCACATGATGGGTAGCAGAAGGATGAGTTCAGCTGTGAAGAAGTACTaGTGCAGAAGGGCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSHLQSQHMMGSRRMSSAVKKY*CRRAWE Trigger: CTCCCAGGCCCTTCTGCATCAGTACTTCTTCACAGC...TGAACTCATCCTTCTGCTACCCATCATGTGCTGAGATTGTAGGTGTGAGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| 3UTR CAA 72 bp | GTGCTTCCACCAGGTGGTGCTGTAGTACCAATGTCCTaGAAGAGGGGACAGAGCCTGACAATCATCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLPPGGAVVPMS*KRGQSLTIISK Trigger: CTTAGAGATGATTGTCAGGCTCTGTCCCCTCTTCAAGGACATTGGTACTACAGCACCACCTGGTGGAAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | TGGCCCTGGAGAAGGACACAGCTAGCAGTTTCTGGAGGCTTTGTCTGTAGGACGACAATGTTGTTGGCATaGCAAAACGCAACACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WPWRRTQLAVSGGFVCRTTMLLA*QNATPL Trigger: CAAAGGTGTTGCGTTTTGCCATGCCAACAACATTGT...CGTCCTACAGACAAAGCCTCCAGAAACTGCTAGCTGTGTCCTTCTCCAGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCCCGGGAAGATGCACAATGTTGTTaGCATGGCAAAACGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TQDAKHTAQLFNVVFAREDAQCC*HGKTQH Trigger: GTGTTGCGTTTTGCCATGCCAACAACATTGTGCATC...TTCCCGGGCGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGATGTGACCAGAGAAATAAACAGAGGTCGGATTATGAAGGCATCATAATCAGCAGGTCCAAGGCCTaGGGAGAGGCATCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRCDQRNKQRSDYEGIIISRSKA*GEASGS Trigger: GCTGCCTGATGCCTCTCCCCAGGCCTTGGACCTGCT...GATTATGATGCCTTCATAATCCGACCTCTGTTTATTTCTCTGGTCACATCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTATTCTTAGCTCTCTCACTACTCACATCTGTCCTAAGACCTGAAGTTGGAATGGCGCACCACCTCTaGCAGGTCCGACAGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLFLALSLLTSVLRPEVGMAHHL*QVRQHK Trigger: TTTATGCTGTCGGACCTGGCAGAGGTGGTGCGCCAT...TCCAACTTCAGGTCTTAGGACAGATGTGAGTAGTGAGAGAGCTAAGAATAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGGCCGAATCAGTTCTGGGTTCAACAGTGACTCCTCAAGAGGTCGATCCACAATGTTGTTGGCATaGCAAAACGCAACACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MKGRISSGFNSDSSRGRSTMLLA*QNATPL Trigger: CAAAGGTGTTGCGTTTTGCCATGCCAACAACATTGT...GGATCGACCTCTTGAGGAGTCACTGTTGAACCCAGAACTGATTCGGCCCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGGTTGAGGGAGTGTAAAACCATTCTACTATATGCTGTATATTTGTGCTTTCTCCTCCAGGGGCACTaGTGCCTGCTCCTTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGLRECKTILLYAVYLCFLLQGH*CLLLEG Trigger: TCCTTCAAGGAGCAGGCACCAGTGCCCCTGGAGGAG...AAAGCACAAATATACAGCATATAGTAGAATGGTTTTACACTCCCTCAACCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| CDS-3UTR GCA 90 bp | CCTAACAGCAACAGACAAGGTGCAATTAGACAGAAACACCCAGGGCTTTTATATGGCTTCAGGTCCCGATaGACAATGTTGTTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PNSNRQGAIRQKHPGLLYGFRSR*TMLLAW Trigger: CCATGCCAACAACATTGTGCATCGGGACCTGAAGCC...ATATAAAAGCCCTGGGTGTTTCTGTCTAATTGCACCTTGTCTGTTGCTGTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| 3UTR CAA 72 bp | ACAAAGGGAGTTCAAAGCCGACCTTATCTTCTCATCTaGAAAAGATCAAGCCAGACAGGGGTTGAGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKGVQSRPYLLI*KRSSQTGVEGV Trigger: CACTCCCTCAACCCCTGTCTGGCTTGATCTTTTCAAGATGAGAAGATAAGGTCGGCTTTGAACTCCCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
||
| CDS-3UTR TCA 90 bp | CCTAACAGCAACAGACAAGGTGCAATTAGACAGAAACACCCAGGGCTTTTATATAGCTGCACCACATATTaGCTGTCCTCTATCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNSNRQGAIRQKHPGLLYSCTTY*LSSISC Trigger: GCAGGAGATAGAGGACAGTCAATATGTGGTGCAGCT...ATATAAAAGCCCTGGGTGTTTCTGTCTAATTGCACCTTGTCTGTTGCTGTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
||
| CDS GCA 90 bp | GACTTGTGCTGGGGCCAGGGGCCTCTGGGCATGGCGCACCACCTCTaGCAGGTCCGACAGCATAAATTCGAAAGCCAGCACAAAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: DLCWGQGPLGMAHHL*QVRQHKFESQHKAR Trigger: GCGGGCTTTGTGCTGGCTTTCGAATTTATGCTGTCGGACCTGGCAGAGGTGGTGCGCCATGCCCAGAGGCCCCTGGCCCCAGCACAAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS CCA 90 bp | CGCAACACCTTTGAGCAGCATCTGCAGGTAGCTCTTGACTTGTGCTaGGGCCAGGGGCCTCTGGGCATGGCGCACCACCTCTGCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RNTFEQHLQVALDLC*GQGPLGMAHHLCQV Trigger: GACCTGGCAGAGGTGGTGCGCCATGCCCAGAGGCCCCTGGCCCCAGCACAAGTCAAGAGCTACCTGCAGATGCTGCTCAAAGGTGTTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
||
| CDS-3UTR CAA 90 bp | CTCCGGCCAGACTCGAGGACTCGGGGTACCCAGGATGCGAAGCACACAGCACAGCGCAAGGCCACCTTCTaGAGGGCAACGATCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRPDSRTRGTQDAKHTAQRKATF*RATISP Trigger: TGGCGAGATCGTTGCCCTCAAGAAGGTGGCCTTGCG...CTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAGTCCTCGAGTCTGGCCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222576.2 |
||
| CDS-3UTR CAA 90 bp | CCTTGGGTGCAGGTCCCCCTGGGCGCTGAGGAATTGGCAGCTCGGATGGATGGGCCAAAGTCAGCTATCTaGAGCTGGCCTGAGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PWVQVPLGAEELAARMDGPKSAI*SWPEAL Trigger: CAGTGCCTCAGGCCAGCTCAAGATAGCTGACTTTGG...CCCATCCATCCGAGCTGCCAATTCCTCAGCGCCCAGGGGGACCTGCACCCAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000222470.2 ENSMUST00000223121.2 |
||
| CDS GCA 90 bp | GCCCTGCCCCAAGTATCTCACCATAGGTCAACGCCCTGGTCATACTaGCGAGCGCCATACAGGAGTTCAGGAGCTCGGTACCACCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALPQVSHHRSTPWSY*RAPYRSSGARYHLD Trigger: GTCCAGGTGGTACCGAGCTCCTGAACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGTTGACCTATGGTGAGATACTTGGGGCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223419.2 |
||
| CDS CCA 90 bp | CAGCCCACAGCCCTGCCCCAAGTATCTCACCATAGGTCAACGCCCTaGTCATACTGCCGAGCGCCATACAGGAGTTCAGGAGCTCGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QPTALPQVSHHRSTP*SYCRAPYRSSGARY Trigger: GTACCGAGCTCCTGAACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGTTGACCTATGGTGAGATACTTGGGGCAGGGCTGTGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223419.2 |
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| CDS-3UTR CAA 90 bp | GGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTGGACCAGCATCCGCAAGGCCACCTTCTaGAGGGCAACGATCTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: GKSERGAPRASRKAWTSIRKATF*RATISP Trigger: TGGCGAGATCGTTGCCCTCAAGAAGGTGGCCTTGCG...GATGCTGGTCCAGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | TCCGGCCAGACTCGAGGACTCGGGGTACCCAGGATGCGAAGCACACAGCACAGTCCAAAGTCAGCTATCTaGAGCTGGCCTGAGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: SGQTRGLGVPRMRSTQHSPKSAI*SWPEAL Trigger: CAGTGCCTCAGGCCAGCTCAAGATAGCTGACTTTGG...ACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAGTCCTCGAGTCTGGCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222470.2 ENSMUST00000222576.2 |
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| CDS-3UTR CAA 90 bp | GGAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCCCAAAGTCAGCTATCTaGAGCTGGCCTGAGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: GGHGGKSERGAPRASRKAPKSAI*SWPEAL Trigger: CAGTGCCTCAGGCCAGCTCAAGATAGCTGACTTTGG...GGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222470.2 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | CTCCCACCTCAGACCCCTGAGTGGGGTTACAGGCATACACCACAACCACTACCATCTACGTGCTTGGCTTaGAAGACGATGCCGTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LPPQTPEWGYRHTPQPLPSTCLA*KTMPWA Trigger: CGCCCACGGCATCGTCTTCAAAGCCAAGCACGTAGA...TGGTAGTGGTTGTGGTGTATGCCTGTAACCCCACTCAGGGGTCTGAGGTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| CDS-3UTR CAA 90 bp | TCCGGCCAGACTCGAGGACTCGGGGTACCCAGGATGCGAAGCACACAGCACAGTCAGCTGCACCACATATaGACTGTCCTCTATCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SGQTRGLGVPRMRSTQHSQLHHI*TVLYLL Trigger: CAGGAGATAGAGGACAGTCAATATGTGGTGCAGCTG...ACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAGTCCTCGAGTCTGGCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222576.2 |
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| CDS-3UTR CAA 90 bp | GTGGCCCTGGAGAAGGACACAGTAAGGAGCAGGACCAGGTGTGGTATATATAGCCTGGGCGCTGAGGAATaGGCAGCTCGGATGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: VALEKDTVRSRTRCGIYSLGAEE*AARMDG Trigger: CCCATCCATCCGAGCTGCCAATTCCTCAGCGCCCAG...GCTATATATACCACACCTGGTCCTGCTCCTTACTGTGTCCTTCTCCAGGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222562.2 |
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| CDS-3UTR CAA 90 bp | GGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCCCGTCTACGTGCTTGGCTTaGAAGACGATGCCGTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: GYPGCEAHSTVVQCRFRPSTCLA*KTMPWA Trigger: CGCCCACGGCATCGTCTTCAAAGCCAAGCACGTAGA...CGGGCGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | GGAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCCAGCTGCACCACATATaGACTGTCCTCTATCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GGHGGKSERGAPRASRKAQLHHI*TVLYLL Trigger: CAGGAGATAGAGGACAGTCAATATGTGGTGCAGCTG...GGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | AATACGCTGTCGTGGAGGGTAGAGGAGGAACTGGCCCAGCAGGTCCAAGGCCTGCGATGCACAATGTTGTaGGCATGGCAAAACGCAACA | + |
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Preference number: 5 (lower is better) Translates to: NTLSWRVEEELAQQVQGLRCTML*AWQNAT Trigger: TGTTGCGTTTTGCCATGCCAACAACATTGTGCATCG...CAGGCCTTGGACCTGCTGGGCCAGTTCCTCCTCTACCCTCCACGACAGCGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | AAGGACACAGTAAGGAGCAGGACCAGGTGTGGTATATATAGCCGTGGGGAGGCCCCAAAGTCAGCTATCTaGAGCTGGCCTGAGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: KDTVRSRTRCGIYSRGEAPKSAI*SWPEAL Trigger: CAGTGCCTCAGGCCAGCTCAAGATAGCTGACTTTGG...GGCCTCCCCACGGCTATATATACCACACCTGGTCCTGCTCCTTACTGTGTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222562.2 |
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| CDS-3UTR CAA 90 bp | GAGGACTCGGGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTCCAAAGTCAGCTATCTaGAGCTGGCCTGAGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: EDSGYPGCEAHSTVVQCRPKSAI*SWPEAL Trigger: CAGTGCCTCAGGCCAGCTCAAGATAGCTGACTTTGG...ACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000222470.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | TCTGGGATGAAGGGCCGAATCAGTTCTGGGTTCAACAGTGACTCCTCAAGAGGTTCTACGTGCTTGGCTTaGAAGACGATGCCGTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: SGMKGRISSGFNSDSSRGSTCLA*KTMPWA Trigger: CGCCCACGGCATCGTCTTCAAAGCCAAGCACGTAGA...ACCTCTTGAGGAGTCACTGTTGAACCCAGAACTGATTCGGCCCTTCATCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | GAGGCCATGGAGGCAAATCAGAAAGAGGTGCTCCTAGGGCGAGCAGGAAGGCCTCGATGCACAATGTTGTaGGCATGGCAAAACGCAACA | + |
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Preference number: 5 (lower is better) Translates to: EAMEANQKEVLLGRAGRPRCTML*AWQNAT Trigger: TGTTGCGTTTTGCCATGCCAACAACATTGTGCATCG...AGGCCTTCCTGCTCGCCCTAGGAGCACCTCTTTCTGATTTGCCTCCATGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | GTGGCCCTGGAGAAGGACACAGTAAGGAGCAGGACCAGGTGTGGTATATATAGCCAGCTGCACCACATATaGACTGTCCTCTATCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VALEKDTVRSRTRCGIYSQLHHI*TVLYLL Trigger: CAGGAGATAGAGGACAGTCAATATGTGGTGCAGCTG...GCTATATATACCACACCTGGTCCTGCTCCTTACTGTGTCCTTCTCCAGGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222562.2 |
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| CDS-3UTR CAA 90 bp | CTCGGGGTACCCAGGATGCGAAGCACACAGCACAGTTGTTCAATGTCGTTTTCGCAGCTGCACCACATATaGACTGTCCTCTATCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LGVPRMRSTQHSCSMSFSQLHHI*TVLYLL Trigger: CAGGAGATAGAGGACAGTCAATATGTGGTGCAGCTG...CGAAAACGACATTGAACAACTGTGCTGTGTGCTTCGCATCCTGGGTACCCCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS CCA 90 bp | GTCCGACAGCATAAATTCGAAAGCCAGCACAAAGCCCGCACCATGTaGGAACACAGCCTTCAGCTGCACCACATATTGACTGTCCTCTAT | + |
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Preference number: 5 (lower is better) Translates to: VRQHKFESQHKARTM*EHSLQLHHILTVLY Trigger: ATAGAGGACAGTCAATATGTGGTGCAGCTGAAGGCTGTGTTCCCACATGGTGCGGGCTTTGTGCTGGCTTTCGAATTTATGCTGTCGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | TTTACTGAGTGGATTCCAGGAATGTCTGCTTCCGCATCTGCAAGGCAGCCTCAGCGATGCACAATGTTGTaGGCATGGCAAAACGCAACA | + |
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Preference number: 5 (lower is better) Translates to: FTEWIPGMSASASARQPQRCTML*AWQNAT Trigger: TGTTGCGTTTTGCCATGCCAACAACATTGTGCATCG...CTGAGGCTGCCTTGCAGATGCGGAAGCAGACATTCCTGGAATCCACTCAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | GCCGAATCAGTTCTGGGTTCAACAGTGACTCCTCAAGAGGTCGATCCACATGGACGATGCACAATGTTGTaGGCATGGCAAAACGCAACA | + |
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Preference number: 5 (lower is better) Translates to: AESVLGSTVTPQEVDPHGRCTML*AWQNAT Trigger: TGTTGCGTTTTGCCATGCCAACAACATTGTGCATCG...TCCATGTGGATCGACCTCTTGAGGAGTCACTGTTGAACCCAGAACTGATTCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223121.2 |
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| CDS-3UTR CAA 90 bp | AAGTCCCACTTTATTAAACCCACCAAGTATTTTGGCACTGCAATAAAACACAGCCTGGGCGCTGAGGAATaGGCAGCTCGGATGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: KSHFIKPTKYFGTAIKHSLGAEE*AARMDG Trigger: CCCATCCATCCGAGCTGCCAATTCCTCAGCGCCCAG...GCTGTGTTTTATTGCAGTGCCAAAATACTTGGTGGGTTTAATAAAGTGGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021939.8 |
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| CDS TCA 72 bp | GGGCAACGATCTCGCCAGTCTCTACGTGCTTGGCTTTaGAGACGATGCCGTGGGCGCCCTCCCCGATGCGAC | + |
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Preference number: 6 (lower is better) Translates to: GQRSRQSLRAWL*RRCRGRPPRCD Trigger: GTCGCATCGGGGAGGGCGCCCACGGCATCGTCTTCAAAGCCAAGCACGTAGAGACTGGCGAGATCGTTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| CDS GCA 72 bp | TGGGGCCAGGGGCCTCTGGGCATGGCGCACCACCTCTaGCAGGTCCGACAGCATAAATTCGAAAGCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: WGQGPLGMAHHL*QVRQHKFESQH Trigger: GTGCTGGCTTTCGAATTTATGCTGTCGGACCTGGCAGAGGTGGTGCGCCATGCCCAGAGGCCCCTGGCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS GCA 72 bp | ACCTTTGAGCAGCATCTGCAGGTAGCTCTTGACTTGTaGTGGGGCCAGGGGCCTCTGGGCATGGCGCACCAC | + |
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Preference number: 6 (lower is better) Translates to: TFEQHLQVALDL*WGQGPLGMAHH Trigger: GTGGTGCGCCATGCCCAGAGGCCCCTGGCCCCAGCACAAGTCAAGAGCTACCTGCAGATGCTGCTCAAAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS CAA 72 bp | AGGGCAACGATCTCGCCAGTCTCTACGTGCTTGGCTTaGAAGACGATGCCGTGGGCGCCCTCCCCGATGCGA | + |
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Preference number: 6 (lower is better) Translates to: RATISPVSTCLA*KTMPWAPSPMR Trigger: TCGCATCGGGGAGGGCGCCCACGGCATCGTCTTCAAAGCCAAGCACGTAGAGACTGGCGAGATCGTTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000223121.2 |
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| CDS GCA 72 bp | CAGCCCACAGCCCATAGGTCAACGCCCTGGTCATACTaGCGAGCGCCATACAGGAGTTCAGGAGCTCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: QPTAHRSTPWSY*RAPYRSSGARY Trigger: GTACCGAGCTCCTGAACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGTTGACCTATGGGCTGTGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 |
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| CDS TCA 72 bp | GAATACCATCCTCCAGCCGCCGCAAGGCCACCTTCTTaGGGGCAACGATCTCGCCAGTCTCTACGTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: EYHPPAAARPPS*GQRSRQSLRAW Trigger: CCAAGCACGTAGAGACTGGCGAGATCGTTGCCCTCAAGAAGGTGGCCTTGCGGCGGCTGGAGGATGGTATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS CAA 90 bp | GCCTGGTTAGGAATACCATCCTCCAGCCGCCGCAAGGCCACCTTCTaGAGGGCAACGATCTCGCCAGTCTCTACGTGCTTGGCTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: AWLGIPSSSRRKATF*RATISPVSTCLALK Trigger: CTTCAAAGCCAAGCACGTAGAGACTGGCGAGATCGTTGCCCTCAAGAAGGTGGCCTTGCGGCGGCTGGAGGATGGTATTCCTAACCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021939.8 ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS CCA 72 bp | GCCCTGCCCCAAGTATCTCACCATAGGTCAACGCCCTaGTCATACTGCCGAGCGCCATACAGGAGTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ALPQVSHHRSTP*SYCRAPYRSSG Trigger: TCCTGAACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGTTGACCTATGGTGAGATACTTGGGGCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223419.2 |
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| CDS CCA 72 bp | TCTATCTCCTGCAGAGCCTTGATTTCTCTGAGGGCCTaGTTAGGAATACCATCCTCCAGCCGCCGCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SISCRALISLRA*LGIPSSSRRKA Trigger: GGCCTTGCGGCGGCTGGAGGATGGTATTCCTAACCAGGCCCTCAGAGAAATCAAGGCTCTGCAGGAGATAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
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| CDS GCA 72 bp | CAAGTATCTCACCATAGGTCAACGCCCTGGTCATACTaGCGAGCGCCATACAGGAGTTCAGGAGCTCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: QVSHHRSTPWSY*RAPYRSSGARY Trigger: GTACCGAGCTCCTGAACTCCTGTATGGCGCTCGGCAGTATGACCAGGGCGTTGACCTATGGTGAGATACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223419.2 |
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| CDS CCA 72 bp | CATAAATTCGAAAGCCAGCACAAAGCCCGCACCATGTaGGAACACAGCCTTCAGCTGCACCACATATTGACT | + |
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Preference number: 6 (lower is better) Translates to: HKFESQHKARTM*EHSLQLHHILT Trigger: AGTCAATATGTGGTGCAGCTGAAGGCTGTGTTCCCACATGGTGCGGGCTTTGTGCTGGCTTTCGAATTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021939.8 ENSMUST00000222562.2 ENSMUST00000222576.2 ENSMUST00000223121.2 |
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