Pregenerated sensors for CDK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025358Ensembl transcript IDs: ENSMUST00000026415.9, ENSMUST00000026416.15
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCAAAGCCTTACAAAAGCATCAGCATTCTCAAATGATGTCTCCTaGCCTGCATCACTGCTCTCAGAGGAGGACGGCAATGAGGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: GQSLTKASAFSNDVS*PASLLSEEDGNEAL Trigger: GAGGGCCTCATTGCCGTCCTCCTCTGAGAGCAGTGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTGTAAGGCTTTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCCTGCATCACTGCTCTCAGAGGAGGACGGCAATGAGGCCCTCTGACAACAGCCCTGTGCCCTCCTaGCTCTTCTTGCCTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: PGLHHCSQRRTAMRPSDNSPVPS*LFLPGE Trigger: TTCCCCAGGCAAGAAGAGCCAGGAGGGCACAGGGCT...GTTGTCAGAGGGCCTCATTGCCGTCCTCCTCTGAGAGCAGTGATGCAGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR TCA 90 bp | CAATCCTTCTCAGTAATGACTGAGAAGAGGGGAAGAAGCTGGTGGAAGCCGGGTCCTTCCCTGCACCTCTaGATCCCCAGAACTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: QSFSVMTEKRGRSWWKPGPSLHL*IPRTGW Trigger: CCAGCCAGTTCTGGGGATTCAGAGGTGCAGGGAAGG...ACCCGGCTTCCACCAGCTTCTTCCCCTCTTCTCAGTCATTACTGAGAAGGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCCTGCATCACTGCTCTCAGAGGAGGACGGCAATGAGGCCCTCTGACAACGTCTTAAGATTGGGATaGCAAAACCTGACACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PGLHHCSQRRTAMRPSDNVLRLG*QNLTQG Trigger: CCCCTGTGTCAGGTTTTGCCATCCCAATCTTAAGAC...GTTGTCAGAGGGCCTCATTGCCGTCCTCCTCTGAGAGCAGTGATGCAGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGAAGGTAGACAGGGCACTGGAGGGAATCATTTCTGCTTCTCCAAACGGGCTGAATCCCCAGAACTaGCTGGCAAGAGAAAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: LGKVDRALEGIISASPNGLNPQN*LAREKA Trigger: CGCCTTTTCTCTTGCCAGCCAGTTCTGGGGATTCAG...CCCGTTTGGAGAAGCAGAAATGATTCCCTCCAGTGCCCTGTCTACCTTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR TCA 90 bp | CAATCCTTCTCAGTAATGACTGAGAAGAGGGGAAGAAGCTGGTGGAAGCCGGGTAAAACATCAGAAGGCTaGCCTGTGTCCAAAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: QSFSVMTEKRGRSWWKPGKTSEG*PVSKRP Trigger: GGGCCTTTTGGACACAGGTCAGCCTTCTGATGTTTT...ACCCGGCTTCCACCAGCTTCTTCCCCTCTTCTCAGTCATTACTGAGAAGGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR GCA 90 bp | CACGATGAACAGACCAGAGTGACGTGCAAGCCCTGTGCCCTCCTGGCTCTTCTTCCCAACTTAGGCTTCTaGTCATGTTCATTAGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: HDEQTRVTCKPCALLALLPNLGF*SCSLVH Trigger: GTGAACTAATGAACATGAGCAGAAGCCTAAGTTGGG...AAGAAGAGCCAGGAGGGCACAGGGCTTGCACGTCACTCTGGTCTGTTCATCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR GCA 90 bp | ATTTCCCCCAATGACCTAACCAGGTCAAAGCCTTACAAAAGCATCAGCATTCTCCAGACCAGAGTGACGTaGAAGCCCTGTGCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ISPNDLTRSKPYKSISILQTRVT*KPCALL Trigger: CAGGAGGGCACAGGGCTTGCACGTCACTCTGGTCTG...GAGAATGCTGATGCTTTTGTAAGGCTTTGACCTGGTTAGGTCATTGGGGGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR TCA 90 bp | CACGATGAACAGACCAGAGTGACGTGCAAGCCCTGTGCCCTCCTGGCTCTTCTTCTGTCAGTTTTGCTTTaGATACCAATCCTTCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: HDEQTRVTCKPCALLALLLSVLL*IPILLS Trigger: ACTGAGAAGGATTGGTATTCAAAGCAAAACTGACAG...AAGAAGAGCCAGGAGGGCACAGGGCTTGCACGTCACTCTGGTCTGTTCATCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCACTGCTCTCAGCTGAATCCCCAGAACTaGCTGGCAAGAGAAAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: QKHQHSQMMSPGLHHCSQLNPQN*LAREKA Trigger: CGCCTTTTCTCTTGCCAGCCAGTTCTGGGGATTCAG...CTGAGAGCAGTGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCACTGCTCTCAGGGAGGGAATCATTTCTaGTTCTCCAAACGGGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: QKHQHSQMMSPGLHHCSQGGNHF*FSKRAL Trigger: AAGGGCCCGTTTGGAGAAGCAGAAATGATTCCCTCC...CTGAGAGCAGTGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR CCA 90 bp | GAGAAATTCAAGTGTCTTTCACCTTGCCCTGTGAACCACGATGAACAGACCAGAATCCCCAGAACTGGCTaGCAAGAGAAAAGGCGAATG | + |
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Preference number: 2 (lower is better) Translates to: EKFKCLSPCPVNHDEQTRIPRTG*QEKRRM Trigger: CATTCGCCTTTTCTCTTGCCAGCCAGTTCTGGGGAT...TCTGGTCTGTTCATCGTGGTTCACAGGGCAAGGTGAAAGACACTTGAATTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGTGTAGCAGTCAGCACCAGAAAACAGTAAGATTGCTAAAAAGAGAAATTGTGGCAGCAGGAGTCTaGGGGCGTTTCCCTCAACAT | + |
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Preference number: 2 (lower is better) Translates to: PGCSSQHQKTVRLLKREIVAAGV*GRFPQH Trigger: ATGTTGAGGGAAACGCCCCCAGACTCCTGCTGCCAC...AATTTCTCTTTTTAGCAATCTTACTGTTTTCTGGTGCTGACTGCTACACCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCCTTACAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCAGGAGGGAATCATTTCTaGTTCTCCAAACGGGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: QSLTKASAFSNDVSWPASGGNHF*FSKRAL Trigger: AAGGGCCCGTTTGGAGAAGCAGAAATGATTCCCTCC...TGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTGTAAGGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCCTTACAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCAAAGTGTCTTTCACCTTaGCCTGTGAACCACGATGAA | + |
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Preference number: 2 (lower is better) Translates to: QSLTKASAFSNDVSWPASKCLSP*PVNHDE Trigger: TTCATCGTGGTTCACAGGGCAAGGTGAAAGACACTT...TGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTGTAAGGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCCTTACAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCACTGTCAGTTTTGCTTTaGATACCAATCCTTCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: QSLTKASAFSNDVSWPASLSVLL*IPILLS Trigger: ACTGAGAAGGATTGGTATTCAAAGCAAAACTGACAG...TGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTGTAAGGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR GCA 72 bp | TGCCCTGTGAACCACGATGAACAGACCAGAGTGACGTaGAAGCCCTGTGCCCTCCTGGCTCTTCTTGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: CPVNHDEQTRVT*KPCALLALLAW Trigger: CCAGGCAAGAAGAGCCAGGAGGGCACAGGGCTTGCACGTCACTCTGGTCTGTTCATCGTGGTTCACAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR TCA 72 bp | CTGGCCTGCATCACTGCTCTCAGAGGAGGACGGCAATaGGGCCCTCTGACAACTCAAGAACTGAGCTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: LACITALRGGRQ*GPLTTQELSFQ Trigger: TTGGAAGCTCAGTTCTTGAGTTGTCAGAGGGCCTCATTGCCGTCCTCCTCTGAGAGCAGTGATGCAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR-3UTR CAA 90 bp | CACGATGAACAGACCAGAGTGACGTGCAAGCCCTGTGCCCTCCTGGCTCTTCTTACTGTCAGTTTTGCTTaGAATACCAATCCTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: HDEQTRVTCKPCALLALLTVSFA*NTNPSQ Trigger: CTGAGAAGGATTGGTATTCAAAGCAAAACTGACAGT...AAGAAGAGCCAGGAGGGCACAGGGCTTGCACGTCACTCTGGTCTGTTCATCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR GCA 72 bp | TCTTGCTTGGTTCTGAGCTGTCCCAACTTAGGCTTCTaGTCATGTTCATTAGTTCACAAAACAGTGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SCLVLSCPNLGF*SCSLVHKTVAA Trigger: TGCTGCCACTGTTTTGTGAACTAATGAACATGAGCAGAAGCCTAAGTTGGGACAGCTCAGAACCAAGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| 3UTR CCA 72 bp | TGTTCATTAGTTCACAAAACAGTGGCAGCAGGAGTCTaGGGGCGTTTCCCTCAACATGGTAATTATGAGACA | + |
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Preference number: 3 (lower is better) Translates to: CSLVHKTVAAGV*GRFPQHGNYET Trigger: TGTCTCATAATTACCATGTTGAGGGAAACGCCCCCAGACTCCTGCTGCCACTGTTTTGTGAACTAATGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR TCA 90 bp | CCTGGCCTGCATCACTGCTCTCAGAGGAGGACGGCAATGAGGCCCTCTGACAACTCCTGGAAGAAAGGGTaGGCCAGGGCTGCTTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PGLHHCSQRRTAMRPSDNSWKKG*ARAALA Trigger: AGCCAAAGCAGCCCTGGCTCACCCTTTCTTCCAGGA...GTTGTCAGAGGGCCTCATTGCCGTCCTCCTCTGAGAGCAGTGATGCAGGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CCTGGCCTGCATCACTGCTCTCAGAGGAGGACGGCAATGAGGCCCTCTGACAACCCAAACCACCTCATCTaGGGTCCCCAGAGTCCGAAA | + |
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Preference number: 4 (lower is better) Translates to: PGLHHCSQRRTAMRPSDNPNHLI*GPQSPK Trigger: TTTCGGACTCTGGGGACCCCAGATGAGGTGGTTTGG...GTTGTCAGAGGGCCTCATTGCCGTCCTCCTCTGAGAGCAGTGATGCAGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CCTGGCCTGCATCACTGCTCTCAGAGGAGGACGGCAATGAGGCCCTCTGACAACGAGCCAGGGCTGCTTTaGCTGAAATCCGCTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGLHHCSQRRTAMRPSDNEPGLL*LKSACW Trigger: CCAACAAGCGGATTTCAGCCAAAGCAGCCCTGGCTC...GTTGTCAGAGGGCCTCATTGCCGTCCTCCTCTGAGAGCAGTGATGCAGGCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR TCA 90 bp | ATCAGAAGGCTGACCTGTGTCCAAAAGGCCCAGGGTCAAGTCAGACCACGGGTGCAGGGCTGCTTTGGCTaGAATCCGCTTGTTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: IRRLTCVQKAQGQVRPRVQGCFG*NPLVGV Trigger: GACCCCAACAAGCGGATTTCAGCCAAAGCAGCCCTG...CACCCGTGGTCTGACTTGACCCTGGGCCTTTTGGACACAGGTCAGCCTTCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | GCTGACCTGTGTCCAAAAGGCCCAGGGTCAAGTCAGACCACGGGTGAAAAGGGCCTCGGATGGCAGTACTaGGTACACCTTCAGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ADLCPKGPGSSQTTGEKGLGWQY*VHLQSQ Trigger: CTGAGACTGAAGGTGTACCCAGTACTGCCATCCGAG...GCCCTTTTCACCCGTGGTCTGACTTGACCCTGGGCCTTTTGGACACAGGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | GCTGACCTGTGTCCAAAAGGCCCAGGGTCAAGTCAGACCACGGGTGAAAAGGGCCCGAAGGTGGGGCACTaGTTTAGTTACATCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: ADLCPKGPGSSQTTGEKGPKVGH*FSYILE Trigger: TTCCAGGATGTAACTAAACCAGTGCCCCACCTTCGG...GCCCTTTTCACCCGTGGTCTGACTTGACCCTGGGCCTTTTGGACACAGGTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | ATCAGAAGGCTGACCTGTGTCCAAAAGGCCCAGGGTCAAGTCAGACCACGGGTGCAGAAGAATTTCAGGTaGTCGGTACCACAGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: IRRLTCVQKAQGQVRPRVQKNFR*SVPQGH Trigger: GTGACCCTGTGGTACCGAGCACCTGAAATTCTTCTG...CACCCGTGGTCTGACTTGACCCTGGGCCTTTTGGACACAGGTCAGCCTTCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | CCTGGCCTGCATCACTGCTCTCAGAGGAGGACGGCAATGAGGCCCTCTGACAACTGGGTACACACTAGGTaGATTTCAGCAAAGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: PGLHHCSQRRTAMRPSDNWVHTR*ISAKMQ Trigger: CTGCATCTTTGCTGAAATGCACCTAGTGTGTACCCA...GTTGTCAGAGGGCCTCATTGCCGTCCTCCTCTGAGAGCAGTGATGCAGGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | CACGATGAACAGACCAGAGTGACGTGCAAGCCCTGTGCCCTCCTGGCTCTTCTTCCATTTCAGCAAAGATaGAGCCCAGGCTCCAGATAT | + |
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Preference number: 4 (lower is better) Translates to: HDEQTRVTCKPCALLALLPFQQR*SPGSRY Trigger: ATATCTGGAGCCTGGGCTGCATCTTTGCTGAAATGG...AAGAAGAGCCAGGAGGGCACAGGGCTTGCACGTCACTCTGGTCTGTTCATCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026415.9 |
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| CDS-3UTR CCA 90 bp | GCTAAGACAGCCAGAAAACATCAGAAGGCTGACCTGTGTCCAAAAGGCCCAGGGCTCGGATGGCAGTACTaGGTACACCTTCAGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: AKTARKHQKADLCPKGPGLGWQY*VHLQSQ Trigger: CTGAGACTGAAGGTGTACCCAGTACTGCCATCCGAG...CCCTGGGCCTTTTGGACACAGGTCAGCCTTCTGATGTTTTCTGGCTGTCTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | GAAGAGGGGAAGAAGCTGGTGGAAGCCGGGTTAAGTGCATCTAATGCCAAAACCCCAAACCACCTCATCTaGGGTCCCCAGAGTCCGAAA | + |
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Preference number: 4 (lower is better) Translates to: EEGKKLVEAGLSASNAKTPNHLI*GPQSPK Trigger: TTTCGGACTCTGGGGACCCCAGATGAGGTGGTTTGG...GGTTTTGGCATTAGATGCACTTAACCCGGCTTCCACCAGCTTCTTCCCCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CTGGGGAAGGTAGACAGGGCACTGGAGGGAATCATTTCTGCTTCTCCAAACGGGCTTGCCGAGCCCACTTaGGGAAACTTGGCTTATAAT | + |
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Preference number: 4 (lower is better) Translates to: LGKVDRALEGIISASPNGLAEPT*GNLAYN Trigger: ATTATAAGCCAAGTTTCCCCAAGTGGGCTCGGCAAG...CCCGTTTGGAGAAGCAGAAATGATTCCCTCCAGTGCCCTGTCTACCTTCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | GCTAAGACAGCCAGAAAACATCAGAAGGCTGACCTGTGTCCAAAAGGCCCAGGGCTTGATGGACCCCTCTaGATTGATAAGCAGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AKTARKHQKADLCPKGPGLDGPL*IDKQVL Trigger: CAGAACCTGCTTATCAATGCAGAGGGGTCCATCAAG...CCCTGGGCCTTTTGGACACAGGTCAGCCTTCTGATGTTTTCTGGCTGTCTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CTGGGGAAGGTAGACAGGGCACTGGAGGGAATCATTTCTGCTTCTCCAAACGGGCCGTCAACTTGTTTTTaGCTTTGTACACCACTCCGT | + |
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Preference number: 4 (lower is better) Translates to: LGKVDRALEGIISASPNGPSTCF*LCTPLR Trigger: ACGGAGTGGTGTACAAAGCCAAAAACAAGTTGACGG...CCCGTTTGGAGAAGCAGAAATGATTCCCTCCAGTGCCCTGTCTACCTTCCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CCTGGCCTGCATCACTGCTCTCAGAGGAGGACGGCAATGAGGCCCTCTGACAACAATTTCTTGAGGTCCTaGTGCAGAAATTCAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: PGLHHCSQRRTAMRPSDNNFLRS*CRNSKT Trigger: GGTTTTTGAATTTCTGCACCAGGACCTCAAGAAATT...GTTGTCAGAGGGCCTCATTGCCGTCCTCCTCTGAGAGCAGTGATGCAGGCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CCTGGGTGTAGCAGTCAGCACCAGAAAACAGTAAGATTGCTAAAAAGAGAAATTGCGGGTCACGGGGTGTaGGGCAGACACTGCGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PGCSSQHQKTVRLLKREIAGHGV*GRHCGH Trigger: ATGACCGCAGTGTCTGCCCCACACCCCGTGACCCGC...AATTTCTCTTTTTAGCAATCTTACTGTTTTCTGGTGCTGACTGCTACACCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | GCTAAGACAGCCAGAAAACATCAGAAGGCTGACCTGTGTCCAAAAGGCCCAGGGCTTGCCGAGCCCACTTaGGGAAACTTGGCTTATAAT | + |
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Preference number: 4 (lower is better) Translates to: AKTARKHQKADLCPKGPGLAEPT*GNLAYN Trigger: ATTATAAGCCAAGTTTCCCCAAGTGGGCTCGGCAAG...CCCTGGGCCTTTTGGACACAGGTCAGCCTTCTGATGTTTTCTGGCTGTCTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR TCA 90 bp | ATTTCCCCCAATGACCTAACCAGGTCAAAGCCTTACAAAAGCATCAGCATTCTCCAGGGCTGCTTTGGCTaGAATCCGCTTGTTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ISPNDLTRSKPYKSISILQGCFG*NPLVGV Trigger: GACCCCAACAAGCGGATTTCAGCCAAAGCAGCCCTG...GAGAATGCTGATGCTTTTGTAAGGCTTTGACCTGGTTAGGTCATTGGGGGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | CAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCACTGCTCTCAGACACCACTCCGTACGTaGCCTCTCCAATCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QKHQHSQMMSPGLHHCSQTPLRT*PLQSSP Trigger: TGGAGAAGATTGGAGAGGGCACGTACGGAGTGGTGT...CTGAGAGCAGTGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | GCTAAGACAGCCAGAAAACATCAGAAGGCTGACCTGTGTCCAAAAGGCCCAGGGACTTTGCTAAAATCTTaGCGAGCCCACTTGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: AKTARKHQKADLCPKGPGTLLKS*RAHLGK Trigger: TTTCCCCAAGTGGGCTCGGCAAGATTTTAGCAAAGT...CCCTGGGCCTTTTGGACACAGGTCAGCCTTCTGATGTTTTCTGGCTGTCTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CAATCCTTCTCAGTAATGACTGAGAAGAGGGGAAGAAGCTGGTGGAAGCCGGGTCATAGAAGTAACTCCTaGCCAAACCACCTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: QSFSVMTEKRGRSWWKPGHRSNS*PNHLIW Trigger: CCAGATGAGGTGGTTTGGCCAGGAGTTACTTCTATG...ACCCGGCTTCCACCAGCTTCTTCCCCTCTTCTCAGTCATTACTGAGAAGGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | GCTAAGACAGCCAGAAAACATCAGAAGGCTGACCTGTGTCCAAAAGGCCCAGGGCTGAAATCCGCTTGTTaGGGTCATAGTGCAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: AKTARKHQKADLCPKGPGLKSAC*GHSAAF Trigger: AAATGCTGCACTATGACCCCAACAAGCGGATTTCAG...CCCTGGGCCTTTTGGACACAGGTCAGCCTTCTGATGTTTTCTGGCTGTCTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | GAGAAATTCAAGTGTCTTTCACCTTGCCCTGTGAACCACGATGAACAGACCAGAGAGCCAGGGCTGCTTTaGCTGAAATCCGCTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: EKFKCLSPCPVNHDEQTREPGLL*LKSACW Trigger: CCAACAAGCGGATTTCAGCCAAAGCAGCCCTGGCTC...TCTGGTCTGTTCATCGTGGTTCACAGGGCAAGGTGAAAGACACTTGAATTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | GAGAAATTCAAGTGTCTTTCACCTTGCCCTGTGAACCACGATGAACAGACCAGAACACCACTCCGTACGTaGCCTCTCCAATCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: EKFKCLSPCPVNHDEQTRTPLRT*PLQSSP Trigger: TGGAGAAGATTGGAGAGGGCACGTACGGAGTGGTGT...TCTGGTCTGTTCATCGTGGTTCACAGGGCAAGGTGAAAGACACTTGAATTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | CTGGGGAAGGTAGACAGGGCACTGGAGGGAATCATTTCTGCTTCTCCAAACGGGTTCTTGAGGTCCTGGTaGAGAAATTCAAAAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: LGKVDRALEGIISASPNGFLRSW*RNSKTR Trigger: TCTGGTTTTTGAATTTCTGCACCAGGACCTCAAGAA...CCCGTTTGGAGAAGCAGAAATGATTCCCTCCAGTGCCCTGTCTACCTTCCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | GAAGAGGGGAAGAAGCTGGTGGAAGCCGGGTTAAGTGCATCTAATGCCAAAACCCTGTGGAGTAGTACTTaGAGCCCAGAAGAATTTCAG | + |
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Preference number: 4 (lower is better) Translates to: EEGKKLVEAGLSASNAKTLWSST*SPEEFQ Trigger: CTGAAATTCTTCTGGGCTGCAAGTACTACTCCACAG...GGTTTTGGCATTAGATGCACTTAACCCGGCTTCCACCAGCTTCTTCCCCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCACTGCTCTCAGCCGAAGGTGGGGCACTaGTTTAGTTACATCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: QKHQHSQMMSPGLHHCSQPKVGH*FSYILE Trigger: TTCCAGGATGTAACTAAACCAGTGCCCCACCTTCGG...CTGAGAGCAGTGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | CAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCACTGCTCTCAGCTGTGGAGTAGTACTTaGAGCCCAGAAGAATTTCAG | + |
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Preference number: 4 (lower is better) Translates to: QKHQHSQMMSPGLHHCSQLWSST*SPEEFQ Trigger: CTGAAATTCTTCTGGGCTGCAAGTACTACTCCACAG...CTGAGAGCAGTGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | GAGAAATTCAAGTGTCTTTCACCTTGCCCTGTGAACCACGATGAACAGACCAGAGCATTTCAGCAAAGATaGAGCCCAGGCTCCAGATAT | + |
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Preference number: 4 (lower is better) Translates to: EKFKCLSPCPVNHDEQTRAFQQR*SPGSRY Trigger: ATATCTGGAGCCTGGGCTGCATCTTTGCTGAAATGC...TCTGGTCTGTTCATCGTGGTTCACAGGGCAAGGTGAAAGACACTTGAATTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCAAGAGAAAAGGCGAATGCTAAGACAGCCAGAAAACATCAGAAGGCTACTTTGCTAAAATCTTaGCGAGCCCACTTGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: WLAREKANAKTARKHQKATLLKS*RAHLGK Trigger: TTTCCCCAAGTGGGCTCGGCAAGATTTTAGCAAAGT...AGCCTTCTGATGTTTTCTGGCTGTCTTAGCATTCGCCTTTTCTCTTGCCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR TCA 90 bp | CAATCCTTCTCAGTAATGACTGAGAAGAGGGGAAGAAGCTGGTGGAAGCCGGGTTTGACGATATTAGGGTaGTTAAGTTCCTTAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QSFSVMTEKRGRSWWKPGLTILG*LSSLRR Trigger: TCTCCTTAAGGAACTTAATCACCCTAATATCGTCAA...ACCCGGCTTCCACCAGCTTCTTCCCCTCTTCTCAGTCATTACTGAGAAGGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR TCA 90 bp | GAAGAGGGGAAGAAGCTGGTGGAAGCCGGGTTAAGTGCATCTAATGCCAAAACCTTGACGATATTAGGGTaGTTAAGTTCCTTAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: EEGKKLVEAGLSASNAKTLTILG*LSSLRR Trigger: TCTCCTTAAGGAACTTAATCACCCTAATATCGTCAA...GGTTTTGGCATTAGATGCACTTAACCCGGCTTCCACCAGCTTCTTCCCCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCACTGCTCTCAGCCACTTGGGGAAACTTaGCTTATAATCAGGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: QKHQHSQMMSPGLHHCSQPLGET*LIIRHR Trigger: TCTATGCCTGATTATAAGCCAAGTTTCCCCAAGTGG...CTGAGAGCAGTGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | GAGAAATTCAAGTGTCTTTCACCTTGCCCTGTGAACCACGATGAACAGACCAGACTGAAATCCGCTTGTTaGGGTCATAGTGCAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: EKFKCLSPCPVNHDEQTRLKSAC*GHSAAF Trigger: AAATGCTGCACTATGACCCCAACAAGCGGATTTCAG...TCTGGTCTGTTCATCGTGGTTCACAGGGCAAGGTGAAAGACACTTGAATTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CAAAGCCTTACAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCACCGTCAACTTGTTTTTaGCTTTGTACACCACTCCGT | + |
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Preference number: 4 (lower is better) Translates to: QSLTKASAFSNDVSWPASPSTCF*LCTPLR Trigger: ACGGAGTGGTGTACAAAGCCAAAAACAAGTTGACGG...TGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTGTAAGGCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | ATTTCCCCCAATGACCTAACCAGGTCAAAGCCTTACAAAAGCATCAGCATTCTCCCACTTGGGGAAACTTaGCTTATAATCAGGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: ISPNDLTRSKPYKSISILPLGET*LIIRHR Trigger: TCTATGCCTGATTATAAGCCAAGTTTCCCCAAGTGG...GAGAATGCTGATGCTTTTGTAAGGCTTTGACCTGGTTAGGTCATTGGGGGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR GCA 90 bp | CATGGTAATTATGAGACAGTCTTAAGATTGGGATGGCAAAACCTGACACAGGGGTTCTTGAGGTCCTGGTaGAGAAATTCAAAAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: HGNYETVLRLGWQNLTQGFLRSW*RNSKTR Trigger: TCTGGTTTTTGAATTTCTGCACCAGGACCTCAAGAA...CCCCTGTGTCAGGTTTTGCCATCCCAATCTTAAGACTGTCTCATAATTACCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | CAAAGCCTTACAAAAGCATCAGCATTCTCAAATGATGTCTCCTGGCCTGCATCAAATTTCTTGAGGTCCTaGTGCAGAAATTCAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: QSLTKASAFSNDVSWPASNFLRS*CRNSKT Trigger: GGTTTTTGAATTTCTGCACCAGGACCTCAAGAAATT...TGATGCAGGCCAGGAGACATCATTTGAGAATGCTGATGCTTTTGTAAGGCTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CCA 90 bp | GAAAACTGTCAGTTTTGCTTTGAATACCAATCCTTCTCAGTAATGACTGAGAAGAGCTTATTTTCTGTGTaGATGACATCCAGCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: ENCQFCFEYQSFSVMTEKSLFSV*MTSSSL Trigger: CAAGCTGCTGGATGTCATCCACACAGAAAATAAGCT...CTTCTCAGTCATTACTGAGAAGGATTGGTATTCAAAGCAAAACTGACAGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | CCTGGCCTGCATCACTGCTCTCAGAGGAGGACGGCAATGAGGCCCTCTGACAACGGACTCCAAAGGCTCTaGCTAGTCCAAAGTCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PGLHHCSQRRTAMRPSDNGLQRL*LVQSLP Trigger: TGGCAGACTTTGGACTAGCAAGAGCCTTTGGAGTCC...GTTGTCAGAGGGCCTCATTGCCGTCCTCCTCTGAGAGCAGTGATGCAGGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | GCTGACCTGTGTCCAAAAGGCCCAGGGTCAAGTCAGACCACGGGTGAAAAGGGCACTTCTCCCGTCAACTaGTTTTTGGCTTTGTACACC | + |
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Preference number: 5 (lower is better) Translates to: ADLCPKGPGSSQTTGEKGTSPVN*FLALYT Trigger: GGTGTACAAAGCCAAAAACAAGTTGACGGGAGAAGT...GCCCTTTTCACCCGTGGTCTGACTTGACCCTGGGCCTTTTGGACACAGGTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | GCTGACCTGTGTCCAAAAGGCCCAGGGTCAAGTCAGACCACGGGTGAAAAGGGCGCATCCATGAATTTCTaGAGGTCCTGGTGCAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: ADLCPKGPGSSQTTGEKGASMNF*RSWCRN Trigger: ATTTCTGCACCAGGACCTCAAGAAATTCATGGATGC...GCCCTTTTCACCCGTGGTCTGACTTGACCCTGGGCCTTTTGGACACAGGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS CCA 90 bp | GGAAGAAAGGGTGAGCCAGGGCTGCTTTGGCTGAAATCCGCTTGTTaGGGTCATAGTGCAGCATTTGCGATAACAAGCTCCGTCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: GRKGEPGLLWLKSAC*GHSAAFAITSSVHL Trigger: AAGATGGACGGAGCTTGTTATCGCAAATGCTGCACTATGACCCCAACAAGCGGATTTCAGCCAAAGCAGCCCTGGCTCACCCTTTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | ATCAGAAGGCTGACCTGTGTCCAAAAGGCCCAGGGTCAAGTCAGACCACGGGTGAACTTGTTTTTGGCTTaGTACACCACTCCGTACGTG | + |
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Preference number: 5 (lower is better) Translates to: IRRLTCVQKAQGQVRPRVNLFLA*YTTPYV Trigger: CACGTACGGAGTGGTGTACAAAGCCAAAAACAAGTT...CACCCGTGGTCTGACTTGACCCTGGGCCTTTTGGACACAGGTCAGCCTTCTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | CTGGGGAAGGTAGACAGGGCACTGGAGGGAATCATTTCTGCTTCTCCAAACGGGGCATCCATGAATTTCTaGAGGTCCTGGTGCAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: LGKVDRALEGIISASPNGASMNF*RSWCRN Trigger: ATTTCTGCACCAGGACCTCAAGAAATTCATGGATGC...CCCGTTTGGAGAAGCAGAAATGATTCCCTCCAGTGCCCTGTCTACCTTCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | CAATCCTTCTCAGTAATGACTGAGAAGAGGGGAAGAAGCTGGTGGAAGCCGGGTAACTTTGCTAAAATCTaGCCGAGCCCACTTGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: QSFSVMTEKRGRSWWKPGNFAKI*PSPLGE Trigger: TTCCCCAAGTGGGCTCGGCAAGATTTTAGCAAAGTT...ACCCGGCTTCCACCAGCTTCTTCCCCTCTTCTCAGTCATTACTGAGAAGGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | TGGCTGGCAAGAGAAAAGGCGAATGCTAAGACAGCCAGAAAACATCAGAAGGCTAGGGGAGGCACAACTTaGCTAAAATCTTGCCGAGCC | + |
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Preference number: 5 (lower is better) Translates to: WLAREKANAKTARKHQKARGGTT*LKSCRA Trigger: GGCTCGGCAAGATTTTAGCAAAGTTGTGCCTCCCCT...AGCCTTCTGATGTTTTCTGGCTGTCTTAGCATTCGCCTTTTCTCTTGCCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | CATGGTAATTATGAGACAGTCTTAAGATTGGGATGGCAAAACCTGACACAGGGGCCAAAGTCTGCCAGCTaGATGGACCCCTCTGCATTG | + |
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Preference number: 5 (lower is better) Translates to: HGNYETVLRLGWQNLTQGPKSAS*MDPSAL Trigger: CAATGCAGAGGGGTCCATCAAGCTGGCAGACTTTGG...CCCCTGTGTCAGGTTTTGCCATCCCAATCTTAAGACTGTCTCATAATTACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS CCA 90 bp | AGGCACAACTTTGCTAAAATCTTGCCGAGCCCACTTGGGGAAACTTaGCTTATAATCAGGCATAGAAGTAACTCCTGGCCAAACCACCTC | + |
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Preference number: 5 (lower is better) Translates to: RHNFAKILPSPLGET*LIIRHRSNSWPNHL Trigger: GAGGTGGTTTGGCCAGGAGTTACTTCTATGCCTGATTATAAGCCAAGTTTCCCCAAGTGGGCTCGGCAAGATTTTAGCAAAGTTGTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | ATTTCCCCCAATGACCTAACCAGGTCAAAGCCTTACAAAAGCATCAGCATTCTCAGGGGAGGCACAACTTaGCTAAAATCTTGCCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISPNDLTRSKPYKSISILRGGTT*LKSCRA Trigger: GGCTCGGCAAGATTTTAGCAAAGTTGTGCCTCCCCT...GAGAATGCTGATGCTTTTGTAAGGCTTTGACCTGGTTAGGTCATTGGGGGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | CATGGTAATTATGAGACAGTCTTAAGATTGGGATGGCAAAACCTGACACAGGGGCCCGTCAACTTGTTTTaGGCTTTGTACACCACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HGNYETVLRLGWQNLTQGPVNLF*ALYTTP Trigger: CGGAGTGGTGTACAAAGCCAAAAACAAGTTGACGGG...CCCCTGTGTCAGGTTTTGCCATCCCAATCTTAAGACTGTCTCATAATTACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | CCTGGGTGTAGCAGTCAGCACCAGAAAACAGTAAGATTGCTAAAAAGAGAAATTGGACTCCAAAGGCTCTaGCTAGTCCAAAGTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGCSSQHQKTVRLLKREIGLQRL*LVQSLP Trigger: TGGCAGACTTTGGACTAGCAAGAGCCTTTGGAGTCC...AATTTCTCTTTTTAGCAATCTTACTGTTTTCTGGTGCTGACTGCTACACCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | ATTTCCCCCAATGACCTAACCAGGTCAAAGCCTTACAAAAGCATCAGCATTCTCAACTTTGCTAAAATCTaGCCGAGCCCACTTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISPNDLTRSKPYKSISILNFAKI*PSPLGE Trigger: TTCCCCAAGTGGGCTCGGCAAGATTTTAGCAAAGTT...GAGAATGCTGATGCTTTTGTAAGGCTTTGACCTGGTTAGGTCATTGGGGGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | CCTGGGTGTAGCAGTCAGCACCAGAAAACAGTAAGATTGCTAAAAAGAGAAATTCCCGTCAACTTGTTTTaGGCTTTGTACACCACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGCSSQHQKTVRLLKREIPVNLF*ALYTTP Trigger: CGGAGTGGTGTACAAAGCCAAAAACAAGTTGACGGG...AATTTCTCTTTTTAGCAATCTTACTGTTTTCTGGTGCTGACTGCTACACCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS-3UTR CAA 90 bp | GAAAACTGTCAGTTTTGCTTTGAATACCAATCCTTCTCAGTAATGACTGAGAAGAACTTGTTTTTGGCTTaGTACACCACTCCGTACGTG | + |
|
Preference number: 5 (lower is better) Translates to: ENCQFCFEYQSFSVMTEKNLFLA*YTTPYV Trigger: CACGTACGGAGTGGTGTACAAAGCCAAAAACAAGTT...CTTCTCAGTCATTACTGAGAAGGATTGGTATTCAAAGCAAAACTGACAGTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS CCA 72 bp | GGTGAGCCAGGGCTGCTTTGGCTGAAATCCGCTTGTTaGGGTCATAGTGCAGCATTTGCGATAACAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GEPGLLWLKSAC*GHSAAFAITSS Trigger: GGAGCTTGTTATCGCAAATGCTGCACTATGACCCCAACAAGCGGATTTCAGCCAAAGCAGCCCTGGCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS TCA 72 bp | ATCCTGGAAGAAAGGGTGAGCCAGGGCTGCTTTGGCTaGAATCCGCTTGTTGGGGTCATAGTGCAGCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: ILEERVSQGCFG*NPLVGVIVQHL Trigger: CAAATGCTGCACTATGACCCCAACAAGCGGATTTCAGCCAAAGCAGCCCTGGCTCACCCTTTCTTCCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS TCA 72 bp | TGGGGCACTGGTTTAGTTACATCCTGGAAGAAAGGGTaGGCCAGGGCTGCTTTGGCTGAAATCCGCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WGTGLVTSWKKG*ARAALAEIRLL Trigger: CAACAAGCGGATTTCAGCCAAAGCAGCCCTGGCTCACCCTTTCTTCCAGGATGTAACTAAACCAGTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS CCA 72 bp | TTACATCCTGGAAGAAAGGGTGAGCCAGGGCTGCTTTaGCTGAAATCCGCTTGTTGGGGTCATAGTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHPGRKGEPGLL*LKSACWGHSAA Trigger: TGCTGCACTATGACCCCAACAAGCGGATTTCAGCCAAAGCAGCCCTGGCTCACCCTTTCTTCCAGGATGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS CCA 72 bp | GAAACTTGGCTTATAATCAGGCATAGAAGTAACTCCTaGCCAAACCACCTCATCTGGGGTCCCCAGAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ETWLIIRHRSNS*PNHLIWGPQSP Trigger: CGGACTCTGGGGACCCCAGATGAGGTGGTTTGGCCAGGAGTTACTTCTATGCCTGATTATAAGCCAAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS TCA 72 bp | GTGTGGATGACATCCAGCAGCTTGACGATATTAGGGTaGTTAAGTTCCTTAAGGAGAGAGATCTCTCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: VWMTSSSLTILG*LSSLRREISRM Trigger: CATCCGAGAGATCTCTCTCCTTAAGGAACTTAATCACCCTAATATCGTCAAGCTGCTGGATGTCATCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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| CDS CCA 72 bp | TTTGCTAAAATCTTGCCGAGCCCACTTGGGGAAACTTaGCTTATAATCAGGCATAGAAGTAACTCCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FAKILPSPLGET*LIIRHRSNSWP Trigger: TGGCCAGGAGTTACTTCTATGCCTGATTATAAGCCAAGTTTCCCCAAGTGGGCTCGGCAAGATTTTAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026415.9 ENSMUST00000026416.15 |
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