Pregenerated sensors for CDK19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038481Ensembl transcript IDs: ENSMUST00000044672.11, ENSMUST00000095743.4, ENSMUST00000214659.2, ENSMUST00000215000.2
Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGAGAACTGGAATGCTGATAATCCGACGGCATAACGGGCCCGCCTaGGTTTGCACCGGAAGGCCCAATCCGGGGCTTCTTGTTTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: ARTGMLIIRRHNGPA*VCTGRPNPGLLVWR Trigger: CCTCCAAACAAGAAGCCCCGGATTGGGCCTTCCGGTGCAAACTCAGGCGGGCCCGTTATGCCGTCGGATTATCAGCATTCCAGTTCTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR CCA 90 bp | AAAGCACCCAGTTCTGAAGAGACCACGCGCCCTGCATCCCCAGAGTaGGCTGAGGGTAGCAGGCTTGGCATACACACATCACAGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: KAPSSEETTRPASPE*AEGSRLGIHTSQQS Trigger: GCTCTGCTGTGATGTGTGTATGCCAAGCCTGCTACCCTCAGCCCACTCTGGGGATGCAGGGCGCGTGGTCTCTTCAGAACTGGGTGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
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| 3UTR CCA 90 bp | AACACAAATACCACCCTGCTGGAGTCCAAGGCCAAGCAGAGGGAGTaGGTCAGTACCGGTGGGTCTGGTGAGATGAGTGGTACTGGGTAC | + |
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Preference number: 1 (lower is better) Translates to: NTNTTLLESKAKQRE*VSTGGSGEMSGTGY Trigger: GTACCCAGTACCACTCATCTCACCAGACCCACCGGTACTGACCCACTCCCTCTGCTTGGCCTTGGACTCCAGCAGGGTGGTATTTGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR TCA 90 bp | TGGCAGGGGGTCTTCCTGGAAGTAAGGGTCCTGCAGAGCCTGCTCTaGGGTGATTCTCTTGGTTGGATCCATGGTGAGGAGTTTCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: WQGVFLEVRVLQSLL*GDSLGWIHGEEFLK Trigger: CTTCAGAAACTCCTCACCATGGATCCAACCAAGAGAATCACCTCAGAGCAGGCTCTGCAGGACCCTTACTTCCAGGAAGACCCCCTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR CCA 90 bp | TCTTCCCAGCAGAGCACTGAGCCTGTGAGAAGGGAGCAGTGGCCCTaGACAAAGAGGCTCCAGGGCACAGGACAGAACTTTATATTGATA | + |
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Preference number: 1 (lower is better) Translates to: SSQQSTEPVRREQWP*TKRLQGTGQNFILI Trigger: TATCAATATAAAGTTCTGTCCTGTGCCCTGGAGCCTCTTTGTCCAGGGCCACTGCTCCCTTCTCACAGGCTCAGTGCTCTGCTGGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR CCA 90 bp | ATGTTTTCTTCCCAGCAGAGCACTGAGCCTGTGAGAAGGGAGCAGTaGCCCTGGACAAAGAGGCTCCAGGGCACAGGACAGAACTTTATA | + |
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Preference number: 1 (lower is better) Translates to: MFSSQQSTEPVRREQ*PWTKRLQGTGQNFI Trigger: TATAAAGTTCTGTCCTGTGCCCTGGAGCCTCTTTGTCCAGGGCCACTGCTCCCTTCTCACAGGCTCAGTGCTCTGCTGGGAAGAAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR CCA 90 bp | CTGCTGTGCGGGGGCTGCAGGTTGCTGATGTGGGTTCTGCTGCTGTaGCTGGTTCTTGTCACCTTTCTCTTCTGGTTCATCTTCATTAAG | + |
|
Preference number: 1 (lower is better) Translates to: LLCGGCRLLMWVLLL*LVLVTFLFWFIFIK Trigger: CTTAATGAAGATGAACCAGAAGAGAAAGGTGACAAGAACCAGCCACAGCAGCAGAACCCACATCAGCAACCTGCAGCCCCCGCACAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR TCA 90 bp | AAGGAAATGTCTCCCACTCTTTATGTTTTCTTCCCAGCAGAGCACTaGGCCTGTGAGAAGGGAGCAGTGGCCCTGGACAAAGAGGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: KEMSPTLYVFFPAEH*ACEKGAVALDKEAP Trigger: TGGAGCCTCTTTGTCCAGGGCCACTGCTCCCTTCTCACAGGCTCAGTGCTCTGCTGGGAAGAAAACATAAAGAGTGGGAGACATTTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR GCA 90 bp | GCAAACAAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTaGCCCTGCACTACACTGGGAGCTCTAAGCCTTTACATTTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: ANKAGAARSIRTQVF*PCTTLGALSLYISS Trigger: AGAGGAAATGTAAAGGCTTAGAGCTCCCAGTGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTTGTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR GCA 90 bp | AAGAGTAGCCTAGCGTACTCTGGGACTGAGAGGACCCCTGTACGCTaGTTTGGTAATTCAGGCGAGAACTGGAATGCTGATAATCCGACG | + |
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Preference number: 1 (lower is better) Translates to: KSSLAYSGTERTPVR*FGNSGENWNADNPT Trigger: CGTCGGATTATCAGCATTCCAGTTCTCGCCTGAATTACCAAAGCAGCGTACAGGGGTCCTCTCAGTCCCAGAGTACGCTAGGCTACTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR GCA 90 bp | ACAGGGCGCGCACAGCCCACAGGAGCTTATGATCACTGGACTGGCTaGAATAAGGAAATGTCTCCCACTCTTTATGTTTTCTTCCCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: TGRAQPTGAYDHWTG*NKEMSPTLYVFFPA Trigger: TGCTGGGAAGAAAACATAAAGAGTGGGAGACATTTCCTTATTGCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCTGTGCGCGCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR CCA 90 bp | GAGGCAAGAAGAGAAAATCAAAGGGCCAGAATCAGTGCAGTGATGTaGCACCCAGCTGTACAGAGAGTGGAGTTTTCTGGCTATGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: EARRENQRARISAVM*HPAVQRVEFSGYVL Trigger: CAGGACATAGCCAGAAAACTCCACTCTCTGTACAGCTGGGTGCCACATCACTGCACTGATTCTGGCCCTTTGATTTTCTCTTCTTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
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| 3UTR TCA 90 bp | GGAGACAGTCAGAGATTCCTCCCAGTGAAGCATGTCACATGTCAATaGCTTCATTTTCGGCCCTGGTATGCATGCCACCATACAGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: GDSQRFLPVKHVTCQ*LHFRPWYACHHTAF Trigger: AAAGGCTGTATGGTGGCATGCATACCAGGGCCGAAAATGAAGTCATTGACATGTGACATGCTTCACTGGGAGGAATCTCTGACTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR GCA 90 bp | AGTCCTTCAAAACACTTAGCATGCAAAGGTTTCCTCTCAAGGGTCTaGACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAAC | + |
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Preference number: 1 (lower is better) Translates to: SPSKHLACKGFLSRV*TLHGVSLHSGGLCN Trigger: GTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGTGCAGACCCTTGAGAGGAAACCTTTGCATGCTAAGTGTTTTGAAGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR TCA 90 bp | CTGAAGGCTGCTGTGAACATTTCAAATATGCATAGATGCCTTTTGTaGCAGCTAATCACTGGCTTTCTCCTCAAGTGCTCAGACACAGAC | + |
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Preference number: 1 (lower is better) Translates to: LKAAVNISNMHRCLL*QLITGFLLKCSDTD Trigger: GTCTGTGTCTGAGCACTTGAGGAGAAAGCCAGTGATTAGCTGTCACAAAAGGCATCTATGCATATTTGAAATGTTCACAGCAGCCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR TCA 90 bp | ACACTGTTTACCATAAAAGTCGGAAGCATACTTATCCAAGTGGGTTaGGAAGTAAACAAAGGACCTTCATCTCACAGGGCATTTATAAGT | + |
|
Preference number: 1 (lower is better) Translates to: TLFTIKVGSILIQVG*EVNKGPSSHRAFIS Trigger: ACTTATAAATGCCCTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTTCCGACTTTTATGGTAAACAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR CAA 90 bp | GCCCGCCTGAGTTTGCACCGGAAGGCCCAATCCGGGGCTTCTTGTTaGGAGGCACCTGATTCAGCCCGGGGTCCTGGCTGTGCTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: ARLSLHRKAQSGASC*EAPDSARGPGCAAA Trigger: GGCTGCAGCACAGCCAGGACCCCGGGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCGGATTGGGCCTTCCGGTGCAAACTCAGGCGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACACCCCGCCTCCCGCAGTaGCTCCCCCAGCAGTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTPRLPQ*LPQQFH Trigger: ATGGAACTGCTGGGGGAGCCACTGCGGGAGGCGGGG...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACAGGCACTGCTCTGCTGTaGTGGAGGAGCCTGTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTGTALL*WRSLWG Trigger: CCCCCACAGGCTCCTCCACCACAGCAGAGCAGTGCC...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCACAGGAGCTTATGATCACTGGACTGGCTGCAATAAGGAAATGTCTCCCACCGGGGTCCTGGCTGTaGTGCAGCCCCGCTCCAGCG | + |
|
Preference number: 2 (lower is better) Translates to: SPQELMITGLAAIRKCLPPGSWL*CSPAPA Trigger: CGCTGGAGCGGGGCTGCAGCACAGCCAGGACCCCGG...TGGGAGACATTTCCTTATTGCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACACTTGTTTGGAGGCACCTaGTTCAGCCCGGGGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RLVLLGASEHRCSAPALHLFGGT*FSPGSW Trigger: CCAGGACCCCGGGCTGAATCAGGTGCCTCCAAACAA...GTGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGTCACAGGGCGCGCACAGCCCACAGGAGCTTATGATCACTGGACTGGCTGCGGGTCCTGCAGAGCCTaGTCTGAGGTGATTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SVTGRAQPTGAYDHWTGCGSCRA*SEVILL Trigger: CAAGAGAATCACCTCAGAGCAGGCTCTGCAGGACCC...GCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCTGTGCGCGCCCTGTGACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACATCCCTCAGAGACTGCTaGAGGATGCAGAAGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTSLRDC*RMQKCW Trigger: CCAGCACTTCTGCATCCTTCAGCAGTCTCTGAGGGA...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | GAACGAGGAATGAAGCGGCGAGCAAGTGTGAACAAGAGGCCATTCCTTCCCATCAGAGCACTGAGCCTGTaGGAAGGGAGCAGTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ERGMKRRASVNKRPFLPIRALSL*EGSSGP Trigger: AGGGCCACTGCTCCCTTCTCACAGGCTCAGTGCTCT...GATGGGAAGGAATGGCCTCTTGTTCACACTTGCTCGCCGCTTCATTCCTCGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACATTCCCAGCAGAGCACTaGGCCTGTGAGAAGGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: KAGAARSIRTQVFCPCTTFPAEH*ACEKGA Trigger: TGCTCCCTTCTCACAGGCTCAGTGCTCTGCTGGGAA...TGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGACTATGGCCTTCATGTATACGAAAGGCTTCGCTTCCTTCACAGAGAAAGCCGGGGTCCTGGCTGTaGTGCAGCCCCGCTCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: HRLWPSCIRKASLPSQRKPGSWL*CSPAPA Trigger: CGCTGGAGCGGGGCTGCAGCACAGCCAGGACCCCGG...CTTTCTCTGTGAAGGAAGCGAAGCCTTTCGTATACATGAAGGCCATAGTCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCACAGGGCGCGCACAGCCCACAGGAGCTTATGATCACTGGACTGGCTGCGACCTACACTGTTTTTaGTTGTGGGCACCGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SVTGRAQPTGAYDHWTGCDLHCF*LWAPSV Trigger: GACAGACGGTGCCCACAACCAAAAACAGTGTAGGTC...GCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCTGTGCGCGCCCTGTGACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAACAGGCTCTTCAGACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTTTCCCAGCAGAGCACTaGGCCTGTGAGAAGGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: QETGSSDFPGESQRTGFRFPAEH*ACEKGA Trigger: TGCTCCCTTCTCACAGGCTCAGTGCTCTGCTGGGAA...ACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCGCCTGAGTTTGCACCGGAAGGCCCAATCCGGGGCTTCTTGTTTGGAGGCAAGTCTGTGGAGACTGTaGAGTGCTTTAAAAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: ARLSLHRKAQSGASCLEASLWRL*SALKGA Trigger: TGCACCTTTTAAAGCACTCCACAGTCTCCACAGACT...TGCCTCCAAACAAGAAGCCCCGGATTGGGCCTTCCGGTGCAAACTCAGGCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCACAGGGCGCGCACAGCCCACAGGAGCTTATGATCACTGGACTGGCTGCCTTCATTTTCGGCCCTaGTATGCATGCCACCATACA | + |
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Preference number: 2 (lower is better) Translates to: SVTGRAQPTGAYDHWTGCLHFRP*YACHHT Trigger: TGTATGGTGGCATGCATACCAGGGCCGAAAATGAAG...GCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCTGTGCGCGCCCTGTGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACATTCAGACTTCCCAGGTaGGTCCCAAAGGACTGGATT | + |
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Preference number: 2 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTFRLPR*VPKDWI Trigger: AATCCAGTCCTTTGGGACTCACCTGGGAAGTCTGAA...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | AACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCAACTGCTGCTGAAGCTGCTGTGCGGGGGCTaGAGGTTGCTGATGTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: NHLVEYALSTRATQLLLKLLCGG*RLLMWV Trigger: AACCCACATCAGCAACCTGCAGCCCCCGCACAGCAG...CTTCAGCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACACGACCTACACTGTTTTTaGTTGTGGGCACCGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RLVLLGASEHRCSAPALHDLHCF*LWAPSV Trigger: GACAGACGGTGCCCACAACCAAAAACAGTGTAGGTC...GTGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACACCTTCGAAAGTCTTTCTaGAGTGTTGGGTACTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: ASSGKSQRKSCGGRGRGHLRKSF*SVGYSG Trigger: GCCAGAGTACCCAACACTTCAGAAAGACTTTCGAAG...GTGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTCTGCACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAATTGTTTGGAGGCACCTaGTTCAGCCCGGGGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GSALCMVSVFILGVFVTQLFGGT*FSPGSW Trigger: CCAGGACCCCGGGCTGAATCAGGTGCCTCCAAACAA...TTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGTGCAGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTGTTTGGGCACTGCTCTaGTGTGGTGGAGGAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: TSQVSPKGLDSVKALETSVWALL*CGGGAC Trigger: ACAGGCTCCTCCACCACAGCAGAGCAGTGCCCAAAC...AGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACACATGATTGCTACAGCGTaGGAAAGGTGCACCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: ASSGKSQRKSCGGRGRGHMIATA*ERCTRN Trigger: ATTTCTGGTGCACCTTTCTCACGCTGTAGCAATCAT...GTGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACACTTTACATTTCCTCTTaGTTCTGGAGGTGGGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: KAGAARSIRTQVFCPCTTLYISS*FWRWGF Trigger: GAACCCCCACCTCCAGAATCAAGAGGAAATGTAAAG...TGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACACATGTCACATGTCAATaGCTTCATTTTCGGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KAGAARSIRTQVFCPCTTHVTCQ*LHFRPW Trigger: CCAGGGCCGAAAATGAAGTCATTGACATGTGACATG...TGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTCTGCAGAGCCTGCTCTaGGGTGATTCTCTTGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: TSQVSPKGLDSVKALETSLQSLL*GDSLGW Trigger: CCAACCAAGAGAATCACCTCAGAGCAGGCTCTGCAG...AGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | ATTAGCATCACTCCCTATAGAAAACAGCCTGGAAGGGTAAGTACCCCCGGGTACAAGGGCCAGAATCAGTaGAGTGATGTGGCACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: ISITPYRKQPGRVSTPGYKGQNQ*SDVAPS Trigger: GCTGGGTGCCACATCACTGCACTGATTCTGGCCCTT...GTACCCGGGGGTACTTACCCTTCCAGGCTGTTTTCTATAGGGAGTGATGCTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCGGGTACCATACACTTCTGAAATCCCGAGCCTTTGGGGCTGTGATGTTTTTAGGACCCCTGTACGCTaGTTTGGTAATTCAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: PRVPYTSEIPSLWGCDVFRTPVR*FGNSGE Trigger: CTCGCCTGAATTACCAAAGCAGCGTACAGGGGTCCT...AAAAACATCACAGCCCCAAAGGCTCGGGATTTCAGAAGTGTATGGTACCCGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACAGAAAGGAACACCTTCTaGAATGCGATCACATTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTERNTF*NAITLG Trigger: CCCTAATGTGATCGCATTGCAGAAGGTGTTCCTTTC...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTCACAGGGCGCGCACAGCCCACAGGAGCTTATGATCACTGGACTGGCTGCGTCTTTCTGAAGTGTTaGGTACTCTGGCATTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SVTGRAQPTGAYDHWTGCVFLKC*VLWHFS Trigger: AGAAAAATGCCAGAGTACCCAACACTTCAGAAAGAC...GCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCTGTGCGCGCCCTGTGACTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACAGGTGATTCTCTTGGTTaGATCCATGGTGAGGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTGDSLG*IHGEEF Trigger: AAACTCCTCACCATGGATCCAACCAAGAGAATCACC...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTGTAATTCTCTACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACGGCACTGCTCTGCTGTaGTGGAGGAGCCTGTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: HCNSLQPLSRICSVHKGHGTALL*WRSLWG Trigger: CCCCCACAGGCTCCTCCACCACAGCAGAGCAGTGCC...GTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTAGAGAATTACAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCATGTCACATGTCAATGACTTCATTTTCGGCCCTGGTATGCATGCCACCAGGTTTCAGGTCCCTGTaGAGCACCCAGTTTGCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: EACHMSMTSFSALVCMPPGFRSL*STQFAW Trigger: CCACGCAAACTGGGTGCTCCACAGGGACCTGAAACC...TGGTGGCATGCATACCAGGGCCGAAAATGAAGTCATTGACATGTGACATGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR CAA 90 bp | GACACACATGGGAAAAGCTTTTCCTTCACGTGGAAGAAGCGTGCTTaGATCAGCGTGACTCCTTGTGAGGTCCTAGTGCAGGAAACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: DTHGKSFSFTWKKRA*ISVTPCEVLVQETG Trigger: GCCTGTTTCCTGCACTAGGACCTCACAAGGAGTCACGCTGATCAAAGCACGCTTCTTCCACGTGAAGGAAAAGCTTTTCCCATGTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACAATGATTGCTACAGCGTaGGAAAGGTGCACCAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: KAGAARSIRTQVFCPCTTMIATA*ERCTRN Trigger: ATTTCTGGTGCACCTTTCTCACGCTGTAGCAATCAT...TGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | GAACGAGGAATGAAGCGGCGAGCAAGTGTGAACAAGAGGCCATTCCTTCCCATCCTTTACATTTCCTCTTaGTTCTGGAGGTGGGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ERGMKRRASVNKRPFLPILYISS*FWRWGF Trigger: GAACCCCCACCTCCAGAATCAAGAGGAAATGTAAAG...GATGGGAAGGAATGGCCTCTTGTTCACACTTGCTCGCCGCTTCATTCCTCGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | CCATTAGAGGACCCACCCCATAGACTATGGCCTTCATGTATACGAAAGGCTTCGACCTTCCTGTCGCTGTaGGAAAGGAACACCTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PLEDPPHRLWPSCIRKASTFLSL*ERNTFC Trigger: GCAGAAGGTGTTCCTTTCTCACAGCGACAGGAAGGT...CGAAGCCTTTCGTATACATGAAGGCCATAGTCTATGGGGTGGGTCCTCTAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGAAACAGGCTCTTCAGACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTGATCACTGGACTGGCTaGAATAAGGAAATGTCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: QETGSSDFPGESQRTGFRDHWTG*NKEMSP Trigger: GGGAGACATTTCCTTATTGCAGCCAGTCCAGTGATC...ACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTAGCATCACTCCCTATAGAAAACAGCCTGGAAGGGTAAGTACCCCCGGGTACCAAATACCACCCTGCTaGAGTCCAAGGCCAAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ISITPYRKQPGRVSTPGYQIPPC*SPRPSR Trigger: TCTGCTTGGCCTTGGACTCCAGCAGGGTGGTATTTG...GTACCCGGGGGTACTTACCCTTCCAGGCTGTTTTCTATAGGGAGTGATGCTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCCTGCTGGAGTCCCACTGTTTTTGGTTGTaGGCACCGTCTGTCCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: VSLHSGGLCNTNTTLLESHCFWL*APSVPH Trigger: GTGTGGGACAGACGGTGCCCACAACCAAAAACAGTG...GGACTCCAGCAGGGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAAACAGGCTCTTCAGACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAGTGTGGTCCTGGCTaGCTACAGTATCACATCAAT | + |
|
Preference number: 2 (lower is better) Translates to: QETGSSDFPGESQRTGFRQCGPG*LQYHIN Trigger: ATTGATGTGATACTGTAGCCAGCCAGGACCACACTG...ACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCGGGTACCATACACTTCTGAAATCCCGAGCCTTTGGGGCTGTGATGTTTTTATCAGTGCAGTGATGTaGCACCCAGCTGTACAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PRVPYTSEIPSLWGCDVFISAVM*HPAVQR Trigger: TCTCTGTACAGCTGGGTGCCACATCACTGCACTGAT...AAAAACATCACAGCCCCAAAGGCTCGGGATTTCAGAAGTGTATGGTACCCGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCCGCCTGAGTTTGCACCGGAAGGCCCAATCCGGGGCTTCTTGTTTGGAGGCAAAGTGTTGGGTACTCTaGCATTTTTCTAATATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ARLSLHRKAQSGASCLEAKCWVL*HFSNIF Trigger: GAAGATATTAGAAAAATGCCAGAGTACCCAACACTT...TGCCTCCAAACAAGAAGCCCCGGATTGGGCCTTCCGGTGCAAACTCAGGCGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACACTCCTCTTTTAGTCAATaGAGAAGAGAGCTTAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RLVLLGASEHRCSAPALHSSFSQ*RRELSP Trigger: AGGACTAAGCTCTCTTCTTCATTGACTAAAAGAGGA...GTGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACAAACCCTGCAGATGAATaGACAAGCTTCTATTTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTNPADE*TSFYLS Trigger: ACTCAAATAGAAGCTTGTTCATTCATCTGCAGGGTT...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTAGCATCACTCCCTATAGAAAACAGCCTGGAAGGGTAAGTACCCCCGGGTACCTTTGCTGTCAGGCTTaGCCTTGTGCTTCTCCATGT | + |
|
Preference number: 2 (lower is better) Translates to: ISITPYRKQPGRVSTPGYLCCQA*PCASPC Trigger: ACATGGAGAAGCACAAGGTCAAGCCTGACAGCAAAG...GTACCCGGGGGTACTTACCCTTCCAGGCTGTTTTCTATAGGGAGTGATGCTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTCACAGGGCGCGCACAGCCCACAGGAGCTTATGATCACTGGACTGGCTGCCGTAGATCATGGAAATaGAAATATTCACCTCATCTA | + |
|
Preference number: 2 (lower is better) Translates to: SVTGRAQPTGAYDHWTGCRRSWK*KYSPHL Trigger: TAGATGAGGTGAATATTTGCATTTCCATGATCTACG...GCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCTGTGCGCGCCCTGTGACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | GCGTCTGAAGACACACATGGGAAAAGCTTTTCCTTCACGTGGAAGAAGCGTGCTCGGCCCTGGTATGCATaGCACCATACAGCCTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: ASEDTHGKSFSFTWKKRARPWYA*HHTAFI Trigger: AATAAAGGCTGTATGGTGGCATGCATACCAGGGCCG...AGCACGCTTCTTCCACGTGAAGGAAAAGCTTTTCCCATGTGTGTCTTCAGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCCCACAGGAGCTTATGATCACTGGACTGGCTGCAATAAGGAAATGTCTCCCAGGCTTTCTCCTCAAGTaGTCAGACACAGACCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SPQELMITGLAAIRKCLPGFLLK*SDTDLL Trigger: AAGCAGGTCTGTGTCTGAGCACTTGAGGAGAAAGCC...TGGGAGACATTTCCTTATTGCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGTCTGCACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAACAAATACCACCCTGCTaGAGTCCAAGGCCAAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSALCMVSVFILGVFVTQQIPPC*SPRPSR Trigger: TCTGCTTGGCCTTGGACTCCAGCAGGGTGGTATTTG...TTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGTGCAGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAAACAGGCTCTTCAGACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTGGAGCTTATGATCACTaGACTGGCTGCAATAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QETGSSDFPGESQRTGFRGAYDH*TGCNKE Trigger: TTCCTTATTGCAGCCAGTCCAGTGATCATAAGCTCC...ACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTAGTGCAGGAAACAGGCTCTTCAGACTTCCCAGGTGAGTCCCAAAGGACTCCTTTGTGTAATGCCTaGCACCAAGTAAAAGTTCCG | + |
|
Preference number: 2 (lower is better) Translates to: VLVQETGSSDFPGESQRTPLCNA*HQVKVP Trigger: CGGAACTTTTACTTGGTGCCAGGCATTACACAAAGG...AGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTGCACTAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCACAAGAATCCTCTTTTAGTCAATGAAGAAGAGAGCTTAGTCCTTCAAAACCCCCGCCTCCCGCAGTaGCTCCCCCAGCAGTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LHKNPLLVNEEESLVLQNPRLPQ*LPQQFH Trigger: ATGGAACTGCTGGGGGAGCCACTGCGGGAGGCGGGG...GTTTTGAAGGACTAAGCTCTCTTCTTCATTGACTAAAAGAGGATTCTTGTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTCACAGGGCGCGCACAGCCCACAGGAGCTTATGATCACTGGACTGGCTGCATCTTGGTAACTGCATaGGCTTTTTATTTGCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SVTGRAQPTGAYDHWTGCILVTA*AFYLLL Trigger: CAAAAGCAAATAAAAAGCCCATGCAGTTACCAAGAT...GCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCTGTGCGCGCCCTGTGACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACAAACCCTGCAGATGAATaGACAAGCTTCTATTTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: KAGAARSIRTQVFCPCTTNPADE*TSFYLS Trigger: ACTCAAATAGAAGCTTGTTCATTCATCTGCAGGGTT...TGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTTGGTTGTGGGCACCGTCTGTCCCACACTGTCTTTCACCTTCCCTGAAAGACTTTACATTTCCTCTTaGTTCTGGAGGTGGGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: FLVVGTVCPTLSFTFPERLYISS*FWRWGF Trigger: GAACCCCCACCTCCAGAATCAAGAGGAAATGTAAAG...TCTTTCAGGGAAGGTGAAAGACAGTGTGGGACAGACGGTGCCCACAACCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCATGGCAATATCTAATCATACAGAGGGGGTGCGTGCAGAAAATGACCAAAAAGCCCACAGGAGCTTATaGTCACTGGACTGGCTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: AMAISNHTEGVRAENDQKAHRSL*SLDWLQ Trigger: TTGCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGC...TTTTTGGTCATTTTCTGCACGCACCCCCTCTGTATGATTAGATATTGCCATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCCGTTACAGAGTGCAAAATGTCAGAGCTCCAAGTCCTAAGGTTTCAAAAGCCAGAATCAGTGCAGTaGTGTGGCACCCAGCTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: SSVTECKMSELQVLRFQKPESVQ*CGTQLY Trigger: GTACAGCTGGGTGCCACATCACTGCACTGATTCTGG...CTTTTGAAACCTTAGGACTTGGAGCTCTGACATTTTGCACTCTGTAACGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | GAACGAGGAATGAAGCGGCGAGCAAGTGTGAACAAGAGGCCATTCCTTCCCATCGTGGAGACTGTGGAGTaGTTTAAAAGGTGCATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ERGMKRRASVNKRPFLPIVETVE*FKRCIS Trigger: TGAAATGCACCTTTTAAAGCACTCCACAGTCTCCAC...GATGGGAAGGAATGGCCTCTTGTTCACACTTGCTCGCCGCTTCATTCCTCGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCATGTCACATGTCAATGACTTCATTTTCGGCCCTGGTATGCATGCCACCACGGCCCTGGTATGCATaGCACCATACAGCCTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: EACHMSMTSFSALVCMPPRPWYA*HHTAFI Trigger: AATAAAGGCTGTATGGTGGCATGCATACCAGGGCCG...TGGTGGCATGCATACCAGGGCCGAAAATGAAGTCATTGACATGTGACATGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCAACTGCTGCTGAGGATGCAGAAGTGCTaGGTAGATCAGAGGCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: YNHLVEYALSTRATQLLLRMQKC*VDQRLH Trigger: ATGAAGCCTCTGATCTACCCAGCACTTCTGCATCCT...CAGCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | GCGTCTGAAGACACACATGGGAAAAGCTTTTCCTTCACGTGGAAGAAGCGTGCTAGGATGCAGAAGTGCTaGGTAGATCAGAGGCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: ASEDTHGKSFSFTWKKRARMQKC*VDQRLH Trigger: ATGAAGCCTCTGATCTACCCAGCACTTCTGCATCCT...AGCACGCTTCTTCCACGTGAAGGAAAAGCTTTTCCCATGTGTGTCTTCAGACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGAGGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGAAAACTATACACCACTaGAACCCTGTGCCTACAACA | + |
|
Preference number: 2 (lower is better) Translates to: IRGFIRKVTEEIMRGKRAKTIHH*NPVPTT Trigger: TGTTGTAGGCACAGGGTTCCAGTGGTGTATAGTTTT...CGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCCTCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTGTAATTCTCTACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACGTGAGAAGGGAGCAGTaGCCCTGGACAAAGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: HCNSLQPLSRICSVHKGHVRREQ*PWTKRL Trigger: GAGCCTCTTTGTCCAGGGCCACTGCTCCCTTCTCAC...GTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTAGAGAATTACAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | GAACGAGGAATGAAGCGGCGAGCAAGTGTGAACAAGAGGCCATTCCTTCCCATCGAGCAAGGAGAGCCATaGCAATATCTAATCATACAG | + |
|
Preference number: 2 (lower is better) Translates to: ERGMKRRASVNKRPFLPIEQGEP*QYLIIQ Trigger: CTGTATGATTAGATATTGCCATGGCTCTCCTTGCTC...GATGGGAAGGAATGGCCTCTTGTTCACACTTGCTCGCCGCTTCATTCCTCGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCAACTGCTGCTGTTGCCCAGATGTCAATaGCCTTTGTGTAATGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YNHLVEYALSTRATQLLLLPRCQ*PLCNAW Trigger: CCAGGCATTACACAAAGGCCATTGACATCTGGGCAA...CAGCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCGGGTACCATACACTTCTGAAATCCCGAGCCTTTGGGGCTGTGATGTTTTTGGTGATTCTCTTGGTTaGATCCATGGTGAGGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PRVPYTSEIPSLWGCDVFGDSLG*IHGEEF Trigger: AAACTCCTCACCATGGATCCAACCAAGAGAATCACC...AAAAACATCACAGCCCCAAAGGCTCGGGATTTCAGAAGTGTATGGTACCCGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTGTAATTCTCTACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACTCCCTCAGAGACTGCTaGAGGATGCAGAAGTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HCNSLQPLSRICSVHKGHSLRDC*RMQKCW Trigger: CCAGCACTTCTGCATCCTTCAGCAGTCTCTGAGGGA...GTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTAGAGAATTACAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | GGACCCCTGTACGCTGCTTTGGTAATTCAGGCGAGAACTGGAATGCTGATAATCATGATTGCTACAGCGTaGGAAAGGTGCACCAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: GPLYAALVIQARTGMLIIMIATA*ERCTRN Trigger: ATTTCTGGTGCACCTTTCTCACGCTGTAGCAATCAT...GATTATCAGCATTCCAGTTCTCGCCTGAATTACCAAAGCAGCGTACAGGGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | GGACCCCTGTACGCTGCTTTGGTAATTCAGGCGAGAACTGGAATGCTGATAATCGCTTTAGGGGAGAATTaGATAACCTGGCAAAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: GPLYAALVIQARTGMLIIALGEN*ITWQNP Trigger: TGGGTTTTGCCAGGTTATTCAATTCTCCCCTAAAGC...GATTATCAGCATTCCAGTTCTCGCCTGAATTACCAAAGCAGCGTACAGGGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCCGGGTACCATACACTTCTGAAATCCCGAGCCTTTGGGGCTGTGATGTTTTTAAATATGCAGCCTATTaGCCAGATGTCAATGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PRVPYTSEIPSLWGCDVFKYAAY*PDVNGL Trigger: AAGGCCATTGACATCTGGGCAATAGGCTGCATATTT...AAAAACATCACAGCCCCAAAGGCTCGGGATTTCAGAAGTGTATGGTACCCGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTAGTCTGTGGAGACTGTaGAGTGCTTTAAAAGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: TSQVSPKGLDSVKALETSSLWRL*SALKGA Trigger: TGCACCTTTTAAAGCACTCCACAGTCTCCACAGACT...AGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCCTGCTGGAGTCCAGTCTGTGGAGACTGTaGAGTGCTTTAAAAGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VSLHSGGLCNTNTTLLESSLWRL*SALKGA Trigger: TGCACCTTTTAAAGCACTCCACAGTCTCCACAGACT...GGACTCCAGCAGGGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCATCCTTATGCTGAAATCAGTGTGGTCCTGGCTGGCTACAGTATCACATCACTGTTTTTGGTTGTaGGCACCGTCTGTCCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: ISILMLKSVWSWLATVSHHCFWL*APSVPH Trigger: GTGTGGGACAGACGGTGCCCACAACCAAAAACAGTG...ATGTGATACTGTAGCCAGCCAGGACCACACTGATTTCAGCATAAGGATGCTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCATACTTATCCAAGTGGGTTGAGAAGTAAACAAAGGACCTTCATCTCACAGGTGAGAAGGGAGCAGTaGCCCTGGACAAAGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KHTYPSGLRSKQRTFISQVRREQ*PWTKRL Trigger: GAGCCTCTTTGTCCAGGGCCACTGCTCCCTTCTCAC...CTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | CATTGTAATTCTCTACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACTGCAGGTTGCTGATGTaGGTTCTGCTGCTGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: HCNSLQPLSRICSVHKGHCRLLM*VLLLWL Trigger: CAGCCACAGCAGCAGAACCCACATCAGCAACCTGCA...GTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTAGAGAATTACAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCATGTCACATGTCAATGACTTCATTTTCGGCCCTGGTATGCATGCCACCAGCACATTACCAACCCTaGGGCAAGAAGAGAAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: EACHMSMTSFSALVCMPPAHYQP*GKKRKS Trigger: TGATTTTCTCTTCTTGCCTCAGGGTTGGTAATGTGC...TGGTGGCATGCATACCAGGGCCGAAAATGAAGTCATTGACATGTGACATGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | AACAAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTCGTAGATCATGGAAATaGAAATATTCACCTCATCTA | + |
|
Preference number: 2 (lower is better) Translates to: NKAGAARSIRTQVFCPCTRRSWK*KYSPHL Trigger: TAGATGAGGTGAATATTTGCATTTCCATGATCTACG...AGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCATGGCAATATCTAATCATACAGAGGGGGTGCGTGCAGAAAATGACCAAAAACGGCCCTGGTATGCATaGCACCATACAGCCTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: AMAISNHTEGVRAENDQKRPWYA*HHTAFI Trigger: AATAAAGGCTGTATGGTGGCATGCATACCAGGGCCG...TTTTTGGTCATTTTCTGCACGCACCCCCTCTGTATGATTAGATATTGCCATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTAAGGGCCAGAATCAGTaGAGTGATGTGGCACCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QGTGQNFILIVTLCTRLIKGQNQ*SDVAPS Trigger: GCTGGGTGCCACATCACTGCACTGATTCTGGCCCTT...AATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGAAGTGCTGGGTAGATCAGAGGCTTCATCAGGAAAGTCACAGAGGAAATCAGAACACCTTCTGCAATaGGATCACATTAGGGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: AEVLGRSEASSGKSQRKSEHLLQ*DHIRVL Trigger: AAGCACCCTAATGTGATCGCATTGCAGAAGGTGTTC...TGATTTCCTCTGTGACTTTCCTGATGAAGCCTCTGATCTACCCAGCACTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTAAAACTATACACCACTaGAACCCTGTGCCTACAACA | + |
|
Preference number: 2 (lower is better) Translates to: TSQVSPKGLDSVKALETSKTIHH*NPVPTT Trigger: TGTTGTAGGCACAGGGTTCCAGTGGTGTATAGTTTT...AGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCATGTCACATGTCAATGACTTCATTTTCGGCCCTGGTATGCATGCCACCAAAATCAGTGTGGTCCTaGCTGGCTACAGTATCACAT | + |
|
Preference number: 2 (lower is better) Translates to: EACHMSMTSFSALVCMPPKSVWS*LATVSH Trigger: ATGTGATACTGTAGCCAGCCAGGACCACACTGATTT...TGGTGGCATGCATACCAGGGCCGAAAATGAAGTCATTGACATGTGACATGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCATGTCACATGTCAATGACTTCATTTTCGGCCCTGGTATGCATGCCACCACCTTTGTGTAATGCCTaGCACCAAGTAAAAGTTCCG | + |
|
Preference number: 2 (lower is better) Translates to: EACHMSMTSFSALVCMPPPLCNA*HQVKVP Trigger: CGGAACTTTTACTTGGTGCCAGGCATTACACAAAGG...TGGTGGCATGCATACCAGGGCCGAAAATGAAGTCATTGACATGTGACATGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTATGCATGCCACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGTGCAGGTTGCTGATGTaGGTTCTGCTGCTGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PGMHATIQPLLLFISILMCRLLM*VLLLWL Trigger: CAGCCACAGCAGCAGAACCCACATCAGCAACCTGCA...CATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGTGGCATGCATACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | GGACCCCTGTACGCTGCTTTGGTAATTCAGGCGAGAACTGGAATGCTGATAATCTCCTCTTTTAGTCAATaGAGAAGAGAGCTTAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GPLYAALVIQARTGMLIISSFSQ*RRELSP Trigger: AGGACTAAGCTCTCTTCTTCATTGACTAAAAGAGGA...GATTATCAGCATTCCAGTTCTCGCCTGAATTACCAAAGCAGCGTACAGGGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | GGACCCCTGTACGCTGCTTTGGTAATTCAGGCGAGAACTGGAATGCTGATAATCTCAAAACACTTAGCATaGAAAGGTTTCCTCTCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GPLYAALVIQARTGMLIISKHLA*KGFLSR Trigger: CCTTGAGAGGAAACCTTTGCATGCTAAGTGTTTTGA...GATTATCAGCATTCCAGTTCTCGCCTGAATTACCAAAGCAGCGTACAGGGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTCTGCACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAGTGGAGACTGTGGAGTaGTTTAAAAGGTGCATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GSALCMVSVFILGVFVTQVETVE*FKRCIS Trigger: TGAAATGCACCTTTTAAAGCACTCCACAGTCTCCAC...TTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGTGCAGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGTATGCATGCCACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGAGGACCCCTGTACGCTaGTTTGGTAATTCAGGCGAG | + |
|
Preference number: 2 (lower is better) Translates to: PGMHATIQPLLLFISILMRTPVR*FGNSGE Trigger: CTCGCCTGAATTACCAAAGCAGCGTACAGGGGTCCT...CATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGTGGCATGCATACCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTCAAATACCACCCTGCTaGAGTCCAAGGCCAAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: QGTGQNFILIVTLCTRLIQIPPC*SPRPSR Trigger: TCTGCTTGGCCTTGGACTCCAGCAGGGTGGTATTTG...AATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCAAGTGCTCAGACACAGACCTGCTTCCCCATAACACTGTTTACCATAAAAAATCAGTGTGGTCCTaGCTGGCTACAGTATCACAT | + |
|
Preference number: 2 (lower is better) Translates to: LLKCSDTDLLPHNTVYHKKSVWS*LATVSH Trigger: ATGTGATACTGTAGCCAGCCAGGACCACACTGATTT...TTTATGGTAAACAGTGTTATGGGGAAGCAGGTCTGTGTCTGAGCACTTGAGGAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR CAA 90 bp | TTGTCACCTTTCTCTTCTGGTTCATCTTCATTAAGGAATTCTCTTTaGGGGTACGGAATCTGGCAGCCAGCGAACACATCTAATGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LSPFSSGSSSLRNSL*GYGIWQPANTSNVG Trigger: GCCAACATTAGATGTGTTCGCTGGCTGCCAGATTCCGTACCCCAAAAGAGAATTCCTTAATGAAGATGAACCAGAAGAGAAAGGTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCCACAGGAGCTTATGATCACTGGACTGGCTGCAATAAGGAAATGTCTCCCATGTCTTTTATTAAATTaGGCTCATTCGAGGGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SPQELMITGLAAIRKCLPCLLLN*AHSRAR Trigger: TCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACA...TGGGAGACATTTCCTTATTGCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCATTGTAATTCTCTACCAGAATCAGTGCAGTaGTGTGGCACCCAGCTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: IELIRGQEQSFYFHCNSLPESVQ*CGTQLY Trigger: GTACAGCTGGGTGCCACATCACTGCACTGATTCTGG...TAGAGAATTACAATGAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGAAGTGCTGGGTAGATCAGAGGCTTCATCAGGAAAGTCACAGAGGAAATCATCAAAACACTTAGCATaGAAAGGTTTCCTCTCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: AEVLGRSEASSGKSQRKSSKHLA*KGFLSR Trigger: CCTTGAGAGGAAACCTTTGCATGCTAAGTGTTTTGA...TGATTTCCTCTGTGACTTTCCTGATGAAGCCTCTGATCTACCCAGCACTTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCATTGTAATTCTCTACAAAGAACACAGGTGTTCTaGCCCTGCACTACACTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ELIRGQEQSFYFHCNSLQRTQVF*PCTTLG Trigger: TCCCAGTGTAGTGCAGGGGCAGAACACCTGTGTTCT...TTGTAGAGAATTACAATGAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTCGGCCCTGGTATGCATaGCACCATACAGCCTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: QGTGQNFILIVTLCTRLIRPWYA*HHTAFI Trigger: AATAAAGGCTGTATGGTGGCATGCATACCAGGGCCG...AATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | CTAACTGATCATGATGAAAAGGATTGCTTGTTTTTATATCCTCCTGACGACAGTGGGTCCTGCAGAGCCTaGTCTGAGGTGATTCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LTDHDEKDCLFLYPPDDSGSCRA*SEVILL Trigger: CAAGAGAATCACCTCAGAGCAGGCTCTGCAGGACCC...ACTGTCGTCAGGAGGATATAAAAACAAGCAATCCTTTTCATCATGATCAGTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTGTTTGGGCACTGCTCTaGTGTGGTGGAGGAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KRKHSVQYKRFLTALSLSVWALL*CGGGAC Trigger: ACAGGCTCCTCCACCACAGCAGAGCAGTGCCCAAAC...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | GGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTCTTCACTGTTTTTGGTTGTaGGCACCGTCTGTCCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: GTGQNFILIVTLCTRLILHCFWL*APSVPH Trigger: GTGTGGGACAGACGGTGCCCACAACCAAAAACAGTG...AAGAATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAATGCAAATATTCACCTCATCTACTTTACACTATCTGCCCATAGTTCTTCCGGGGCTTCTTGTTTaGAGGCACCTGATTCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: MEMQIFTSSTLHYLPIVLPGLLV*RHLIQP Trigger: GGGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCGG...AAGAACTATGGGCAGATAGTGTAAAGTAGATGAGGTGAATATTTGCATTTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR CAA 90 bp | TCAAAACACTTAGCATGCAAAGGTTTCCTCTCAAGGGTCTGCACTTaGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SKHLACKGFLSRVCT*HGVSLHSGGLCNTN Trigger: ATTTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGTGCAGACCCTTGAGAGGAAACCTTTGCATGCTAAGTGTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAATCAGTTCATGAAGTATAAAACTATACACCACTGGAACCCTGTGCCTACATTCAGACTTCCCAGGTaGGTCCCAAAGGACTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: LNQFMKYKTIHHWNPVPTFRLPR*VPKDWI Trigger: AATCCAGTCCTTTGGGACTCACCTGGGAAGTCTGAA...TGTAGGCACAGGGTTCCAGTGGTGTATAGTTTTATACTTCATGAACTGATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGTATGCATGCCACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCTTCGAAAGTCTTTCTaGAGTGTTGGGTACTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: PGMHATIQPLLLFISILMLRKSF*SVGYSG Trigger: GCCAGAGTACCCAACACTTCAGAAAGACTTTCGAAG...CATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGTGGCATGCATACCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTCTGCAGAGCCTGCTCTaGGGTGATTCTCTTGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: KRKHSVQYKRFLTALSLSLQSLL*GDSLGW Trigger: CCAACCAAGAGAATCACCTCAGAGCAGGCTCTGCAG...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCAAGTGCTCAGACACAGACCTGCTTCCCCATAACACTGTTTACCATAAATCAAAACACTTAGCATaGAAAGGTTTCCTCTCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LLKCSDTDLLPHNTVYHKSKHLA*KGFLSR Trigger: CCTTGAGAGGAAACCTTTGCATGCTAAGTGTTTTGA...TTTATGGTAAACAGTGTTATGGGGAAGCAGGTCTGTGTCTGAGCACTTGAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | TATTTTACTTGTATATGGACCCCAGAGTATCATAACCAGGTAGATAGGTTCACAAGAACACAGGTGTTCTaGCCCTGCACTACACTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: YFTCIWTPEYHNQVDRFTRTQVF*PCTTLG Trigger: TCCCAGTGTAGTGCAGGGGCAGAACACCTGTGTTCT...TGTGAACCTATCTACCTGGTTATGATACTCTGGGGTCCATATACAAGTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTCAAGTGCTCAGACACAGACCTGCTTCCCCATAACACTGTTTACCATAAAACTGCTGCTGAAGGCTaGTGTGAACATTTCAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: LLKCSDTDLLPHNTVYHKTAAEG*CEHFKY Trigger: ATATTTGAAATGTTCACAGCAGCCTTCAGCAGCAGT...TTTATGGTAAACAGTGTTATGGGGAAGCAGGTCTGTGTCTGAGCACTTGAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCAGTTCATGAAGTATAAAACTATACACCACTGGAACCCTGTGCCTACAACAGACCTACACTGTTTTTaGTTGTGGGCACCGTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: NQFMKYKTIHHWNPVPTTDLHCF*LWAPSV Trigger: GACAGACGGTGCCCACAACCAAAAACAGTGTAGGTC...TGTTGTAGGCACAGGGTTCCAGTGGTGTATAGTTTTATACTTCATGAACTGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTTTTAAAGTAGACTTACAGTGTGGTCCTGGCTaGCTACAGTATCACATCAAT | + |
|
Preference number: 2 (lower is better) Translates to: PKGLDSVKALETSFKVDLQCGPG*LQYHIN Trigger: ATTGATGTGATACTGTAGCCAGCCAGGACCACACTG...TAAGTCTACTTTAAAAGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCATACTTATCCAAGTGGGTTGAGAAGTAAACAAAGGACCTTCATCTCACAGCAGTGTGGTCCTGGCTaGCTACAGTATCACATCAAT | + |
|
Preference number: 2 (lower is better) Translates to: KHTYPSGLRSKQRTFISQQCGPG*LQYHIN Trigger: ATTGATGTGATACTGTAGCCAGCCAGGACCACACTG...CTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGTCTTTTATTAAATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCCCCCAGCAGTTCCATTaGTTTGGGCACTGCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: MSFIKLSSFEGKNRASIFPQQFH*FGHCSA Trigger: AGCAGAGCAGTGCCCAAACCAATGGAACTGCTGGGG...GAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCATTGTAATTCTCTATTCAGACTTCCCAGGTaGGTCCCAAAGGACTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: IELIRGQEQSFYFHCNSLFRLPR*VPKDWI Trigger: AATCCAGTCCTTTGGGACTCACCTGGGAAGTCTGAA...TAGAGAATTACAATGAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGCATACTTATCCAAGTGGGTTGAGAAGTAAACAAAGGACCTTCATCTCACAGGATCTGGTACAGCAGTaGTTTAACCATGGATCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: KHTYPSGLRSKQRTFISQDLVQQ*FNHGSW Trigger: CCAAGATCCATGGTTAAATCACTGCTGTACCAGATC...CTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGAAATGCAAATATTCACCTCATCTACTTTACACTATCTGCCCATAGTTCTTCACTGTTTTTGGTTGTaGGCACCGTCTGTCCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: MEMQIFTSSTLHYLPIVLHCFWL*APSVPH Trigger: GTGTGGGACAGACGGTGCCCACAACCAAAAACAGTG...AAGAACTATGGGCAGATAGTGTAAAGTAGATGAGGTGAATATTTGCATTTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAAATCAGTTCATGAAGTATAAAACTATACACCACTGGAACCCTGTGCCTACATTCTGCTGCTGTGGCTaGTTCTTGTCACCTTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LNQFMKYKTIHHWNPVPTFCCCG*FLSPFS Trigger: AGAGAAAGGTGACAAGAACCAGCCACAGCAGCAGAA...TGTAGGCACAGGGTTCCAGTGGTGTATAGTTTTATACTTCATGAACTGATTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAAATGCAAATATTCACCTCATCTACTTTACACTATCTGCCCATAGTTCTTCTTTGCTGTCAGGCTTaGCCTTGTGCTTCTCCATGT | + |
|
Preference number: 2 (lower is better) Translates to: MEMQIFTSSTLHYLPIVLLCCQA*PCASPC Trigger: ACATGGAGAAGCACAAGGTCAAGCCTGACAGCAAAG...AAGAACTATGGGCAGATAGTGTAAAGTAGATGAGGTGAATATTTGCATTTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTTGGTTGGATCCATGGTaGGGAGTTTCTGAAGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KRKHSVQYKRFLTALSLSWLDPW*GVSEAG Trigger: TCCTGCTTCAGAAACTCCTCACCATGGATCCAACCA...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCCGTTACAGAGTGCAAAATGTCAGAGCTCCAAGTCCTAAGGTTTCAAAAGGCTTTTGATGCACGGTaGAACTTAATAATATGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SSVTECKMSELQVLRFQKAFDAR*NLIICQ Trigger: TTGGCATATTATTAAGTTTCACCGTGCATCAAAAGC...CTTTTGAAACCTTAGGACTTGGAGCTCTGACATTTTGCACTCTGTAACGGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAAATGCAAATATTCACCTCATCTACTTTACACTATCTGCCCATAGTTCTTCCATGTCAGCTATTTTaGCTCTCCCCCTTTCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: MEMQIFTSSTLHYLPIVLPCQLF*LSPFQD Trigger: GTCCTGAAAGGGGGAGAGTCAAAATAGCTGACATGG...AAGAACTATGGGCAGATAGTGTAAAGTAGATGAGGTGAATATTTGCATTTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCTTTTATTAAATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCGGCTTTCTCCTCAAGTaGTCAGACACAGACCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: MSFIKLSSFEGKNRASIFGFLLK*SDTDLL Trigger: AAGCAGGTCTGTGTCTGAGCACTTGAGGAGAAAGCC...GAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTAAAACTATACACCACTaGAACCCTGTGCCTACAACA | + |
|
Preference number: 2 (lower is better) Translates to: QGTGQNFILIVTLCTRLIKTIHH*NPVPTT Trigger: TGTTGTAGGCACAGGGTTCCAGTGGTGTATAGTTTT...AATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTTGCCCAGATGTCAATaGCCTTTGTGTAATGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QKKAFSAIQKILDSVKSQLPRCQ*PLCNAW Trigger: CCAGGCATTACACAAAGGCCATTGACATCTGGGCAA...CTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTTTACTTGTATATGGACCCCAGAGTATCATAACCAGGTAGATAGGTTCACATTCTGCTGCTGTGGCTaGTTCTTGTCACCTTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: YFTCIWTPEYHNQVDRFTFCCCG*FLSPFS Trigger: AGAGAAAGGTGACAAGAACCAGCCACAGCAGCAGAA...TGTGAACCTATCTACCTGGTTATGATACTCTGGGGTCCATATACAAGTAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGCATACTTATCCAAGTGGGTTGAGAAGTAAACAAAGGACCTTCATCTCACAGAACCCTGCAGATGAATaGACAAGCTTCTATTTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: KHTYPSGLRSKQRTFISQNPADE*TSFYLS Trigger: ACTCAAATAGAAGCTTGTTCATTCATCTGCAGGGTT...CTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGTCTTTTATTAAATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCCATGTCACATGTCAATaGCTTCATTTTCGGCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: MSFIKLSSFEGKNRASIFHVTCQ*LHFRPW Trigger: CCAGGGCCGAAAATGAAGTCATTGACATGTGACATG...GAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCATTGTAATTCTCTAGCACATTACCAACCCTaGGGCAAGAAGAGAAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: IELIRGQEQSFYFHCNSLAHYQP*GKKRKS Trigger: TGATTTTCTCTTCTTGCCTCAGGGTTGGTAATGTGC...TAGAGAATTACAATGAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGTATGCATGCCACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGGTGAAAAATGGGTTCTaGAGTCAAGAGTTCAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PGMHATIQPLLLFISILMVKNGF*SQEFSK Trigger: TTTGCTGAACTCTTGACTTCAGAACCCATTTTTCAC...CATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGTGGCATGCATACCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGCATACTTATCCAAGTGGGTTGAGAAGTAAACAAAGGACCTTCATCTCACAGGTGAAAAATGGGTTCTaGAGTCAAGAGTTCAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KHTYPSGLRSKQRTFISQVKNGF*SQEFSK Trigger: TTTGCTGAACTCTTGACTTCAGAACCCATTTTTCAC...CTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGCATACTTATCCAAGTGGGTTGAGAAGTAAACAAAGGACCTTCATCTCACAGACTGCTGCTGAAGGCTaGTGTGAACATTTCAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: KHTYPSGLRSKQRTFISQTAAEG*CEHFKY Trigger: ATATTTGAAATGTTCACAGCAGCCTTCAGCAGCAGT...CTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCACAAGAATCCTCTTTTAGTCAATGAAGAAGAGAGCTTAGTCCTTCAAAACAGTCTGTGGAGACTGTaGAGTGCTTTAAAAGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LHKNPLLVNEEESLVLQNSLWRL*SALKGA Trigger: TGCACCTTTTAAAGCACTCCACAGTCTCCACAGACT...GTTTTGAAGGACTAAGCTCTCTTCTTCATTGACTAAAAGAGGATTCTTGTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCTGAAATCAGTGTGGGGAGCTTATGATCACTaGACTGGCTGCAATAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TIQPLLLFISILMLKSVWGAYDH*TGCNKE Trigger: TTCCTTATTGCAGCCAGTCCAGTGATCATAAGCTCC...CCACACTGATTTCAGCATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTTTACTTGTATATGGACCCCAGAGTATCATAACCAGGTAGATAGGTTCACAAATTCAGGCGAGAACTaGAATGCTGATAATCCGACG | + |
|
Preference number: 2 (lower is better) Translates to: YFTCIWTPEYHNQVDRFTNSGEN*NADNPT Trigger: CGTCGGATTATCAGCATTCCAGTTCTCGCCTGAATT...TGTGAACCTATCTACCTGGTTATGATACTCTGGGGTCCATATACAAGTAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR CAA 90 bp | AACACTGTTTACCATAAAAGTCGGAAGCATACTTATCCAAGTGGGTaGAGAAGTAAACAAAGGACCTTCATCTCACAGGGCATTTATAAG | + |
|
Preference number: 2 (lower is better) Translates to: NTVYHKSRKHTYPSG*RSKQRTFISQGIYK Trigger: CTTATAAATGCCCTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTTCCGACTTTTATGGTAAACAGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCTGAAATCAGTGTGGAAAACTATACACCACTaGAACCCTGTGCCTACAACA | + |
|
Preference number: 2 (lower is better) Translates to: TIQPLLLFISILMLKSVWKTIHH*NPVPTT Trigger: TGTTGTAGGCACAGGGTTCCAGTGGTGTATAGTTTT...CCACACTGATTTCAGCATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | TATTTTACTTGTATATGGACCCCAGAGTATCATAACCAGGTAGATAGGTTCACATCCTCTTTTAGTCAATaGAGAAGAGAGCTTAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: YFTCIWTPEYHNQVDRFTSSFSQ*RRELSP Trigger: AGGACTAAGCTCTCTTCTTCATTGACTAAAAGAGGA...TGTGAACCTATCTACCTGGTTATGATACTCTGGGGTCCATATACAAGTAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCATTGTAATTCTCTATTCTCCCAAACACCTTaGCACAAAGCTACATCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: IELIRGQEQSFYFHCNSLFSQTP*HKATSK Trigger: TTTAGATGTAGCTTTGTGGCAAGGTGTTTGGGAGAA...TAGAGAATTACAATGAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCTTTTATTAAATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCAAATATGCAGCCTATTaGCCAGATGTCAATGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: MSFIKLSSFEGKNRASIFKYAAY*PDVNGL Trigger: AAGGCCATTGACATCTGGGCAATAGGCTGCATATTT...GAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCATTGTAATTCTCTATCAGGCTTGACCTTGTaGTTCTCCATGTATTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: IELIRGQEQSFYFHCNSLSGLTL*FSMYFM Trigger: CATAAAATACATGGAGAAGCACAAGGTCAAGCCTGA...TAGAGAATTACAATGAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | AATCAGTTCATGAAGTATAAAACTATACACCACTGGAACCCTGTGCCTACAACAATGGATCTTGGTAACTaGATGGGCTTTTTATTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: NQFMKYKTIHHWNPVPTTMDLGN*MGFLFA Trigger: AGCAAATAAAAAGCCCATGCAGTTACCAAGATCCAT...TGTTGTAGGCACAGGGTTCCAGTGGTGTATAGTTTTATACTTCATGAACTGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAACTGATCATGATGAAAAGGATTGCTTGTTTTTATATCCTCCTGACGACAGTGTCTTTCTGAAGTGTTaGGTACTCTGGCATTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LTDHDEKDCLFLYPPDDSVFLKC*VLWHFS Trigger: AGAAAAATGCCAGAGTACCCAACACTTCAGAAAGAC...ACTGTCGTCAGGAGGATATAAAAACAAGCAATCCTTTTCATCATGATCAGTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGTCTTTTATTAAATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCAACCCTGCAGATGAATaGACAAGCTTCTATTTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: MSFIKLSSFEGKNRASIFNPADE*TSFYLS Trigger: ACTCAAATAGAAGCTTGTTCATTCATCTGCAGGGTT...GAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCTGAAATCAGTGTGGTGTCTTTTATTAAATTaGGCTCATTCGAGGGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: TIQPLLLFISILMLKSVWCLLLN*AHSRAR Trigger: TCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACA...CCACACTGATTTCAGCATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTTCAGGCTTGACCTTGTaGTTCTCCATGTATTTTATG | + |
|
Preference number: 2 (lower is better) Translates to: KRKHSVQYKRFLTALSLSSGLTL*FSMYFM Trigger: CATAAAATACATGGAGAAGCACAAGGTCAAGCCTGA...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCATTGTAATTCTCTACAAAAGTGTTGGGTACTCTaGCATTTTTCTAATATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ELIRGQEQSFYFHCNSLQKCWVL*HFSNIF Trigger: GAAGATATTAGAAAAATGCCAGAGTACCCAACACTT...TTGTAGAGAATTACAATGAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | CCCCGCCTCCCGCAGTGGCTCCCCCAGCAGTTCCATTaGTTTGGGCACTGCTCTGCTGTGGTGGAGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PRLPQWLPQQFH*FGHCSAVVEEP Trigger: AGGCTCCTCCACCACAGCAGAGCAGTGCCCAAACCAATGGAACTGCTGGGGGAGCCACTGCGGGAGGCGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACACGGGCCCGCCTGAGTTaGCACCGGAAGGCCCAATCC | + |
|
Preference number: 3 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTRARLS*HRKAQS Trigger: GGATTGGGCCTTCCGGTGCAAACTCAGGCGGGCCCG...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | GTTTGCACCGGAAGGCCCAATCCGGGGCTTCTTGTTTaGAGGCACCTGATTCAGCCCGGGGTCCTGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VCTGRPNPGLLV*RHLIQPGVLAV Trigger: CACAGCCAGGACCCCGGGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCGGATTGGGCCTTCCGGTGCAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR TCA 72 bp | GGAATGCTGATAATCCGACGGCATAACGGGCCCGCCTaGGTTTGCACCGGAAGGCCCAATCCGGGGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GMLIIRRHNGPA*VCTGRPNPGLL Trigger: AAGAAGCCCCGGATTGGGCCTTCCGGTGCAAACTCAGGCGGGCCCGTTATGCCGTCGGATTATCAGCATTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | CAGAGCACTGAGCCTGTGAGAAGGGAGCAGTGGCCCTaGACAAAGAGGCTCCAGGGCACAGGACAGAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: QSTEPVRREQWP*TKRLQGTGQNF Trigger: AAAGTTCTGTCCTGTGCCCTGGAGCCTCTTTGTCCAGGGCCACTGCTCCCTTCTCACAGGCTCAGTGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | AGTTCTGAAGAGACCACGCGCCCTGCATCCCCAGAGTaGGCTGAGGGTAGCAGGCTTGGCATACACACATCA | + |
|
Preference number: 3 (lower is better) Translates to: SSEETTRPASPE*AEGSRLGIHTS Trigger: TGATGTGTGTATGCCAAGCCTGCTACCCTCAGCCCACTCTGGGGATGCAGGGCGCGTGGTCTCTTCAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAACAGGCTCTTCAGACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTAGAGCCAGCAGCCCCTaGAGAGAAGCGTCTGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QETGSSDFPGESQRTGFRRASSP*REASED Trigger: GTCTTCAGACGCTTCTCTCAAGGGGCTGCTGGCTCT...ACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | GGGGGCTGCAGGTTGCTGATGTGGGTTCTGCTGCTGTaGCTGGTTCTTGTCACCTTTCTCTTCTGGTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: GGCRLLMWVLLL*LVLVTFLFWFI Trigger: GATGAACCAGAAGAGAAAGGTGACAAGAACCAGCCACAGCAGCAGAACCCACATCAGCAACCTGCAGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR TCA 72 bp | GTCTTCCTGGAAGTAAGGGTCCTGCAGAGCCTGCTCTaGGGTGATTCTCTTGGTTGGATCCATGGTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VFLEVRVLQSLL*GDSLGWIHGEE Trigger: CTCCTCACCATGGATCCAACCAAGAGAATCACCTCAGAGCAGGCTCTGCAGGACCCTTACTTCCAGGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR GCA 72 bp | CTTCCGCCTCTATCGCATCACTCACTCACGATGGACTaGTTCAGCCTCCATCACCCACTCACATTACGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LPPLSHHSLTMD*FSLHHPLTLRY Trigger: GTAGCGTAATGTGAGTGGGTGATGGAGGCTGAAGCAGTCCATCGTGAGTGAGTGATGCGATAGAGGCGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | ACAGGGCGCGCACAGCCCACAGGAGCTTATGATCACTaGACTGGCTGCAATAAGGAAATGTCTCCCACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TGRAQPTGAYDH*TGCNKEMSPTL Trigger: AAGAGTGGGAGACATTTCCTTATTGCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCTGTGCGCGCCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR TCA 72 bp | CCTAGTGCAGGAAACAGGCTCTTCAGACTTCCCAGGTaGGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PSAGNRLFRLPR*VPKDWIPSKLL Trigger: CAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTGCACTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR TCA 72 bp | TCTCCCACTCTTTATGTTTTCTTCCCAGCAGAGCACTaGGCCTGTGAGAAGGGAGCAGTGGCCCTGGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPTLYVFFPAEH*ACEKGAVALDK Trigger: TTTGTCCAGGGCCACTGCTCCCTTCTCACAGGCTCAGTGCTCTGCTGGGAAGAAAACATAAAGAGTGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR GCA 72 bp | GCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTaGACTACACTGGGAGCTCTAAGCCTTTACATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: AARSIRTQVFCP*TTLGALSLYIS Trigger: GGAAATGTAAAGGCTTAGAGCTCCCAGTGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR GCA 72 bp | CTAGCGTACTCTGGGACTGAGAGGACCCCTGTACGCTaGTTTGGTAATTCAGGCGAGAACTGGAATGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LAYSGTERTPVR*FGNSGENWNAD Trigger: ATCAGCATTCCAGTTCTCGCCTGAATTACCAAAGCAGCGTACAGGGGTCCTCTCAGTCCCAGAGTACGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR GCA 72 bp | TTCATTCTGGGGGTCTTTGTAACACAAATACCACCCTaGTGGAGTCCAAGGCCAAGCAGAGGGAGTGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FILGVFVTQIPP*WSPRPSRGSGS Trigger: TGACCCACTCCCTCTGCTTGGCCTTGGACTCCAGCAGGGTGGTATTTGTGTTACAAAGACCCCCAGAATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR GCA 72 bp | ATTTGCTGGTTTCAGGTCCCTGTGGAGCACCCAGTTTaGGTGGAGGTAATGGATGCCATCGAGGATCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ICWFQVPVEHPV*VEVMDAIEDLV Trigger: TACCAGATCCTCGATGGCATCCATTACCTCCACGCAAACTGGGTGCTCCACAGGGACCTGAAACCAGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | GCAGGTAGCTGCAAAGACCTACACTGTTTTTGGTTGTaGGCACCGTCTGTCCCACACTGTCTTTCACCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: AGSCKDLHCFWL*APSVPHCLSPS Trigger: GGAAGGTGAAAGACAGTGTGGGACAGACGGTGCCCACAACCAAAAACAGTGTAGGTCTTTGCAGCTACCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | GATTGCTTCCGCCTCTATCGCATCACTCACTCACGATaGACTGCTTCAGCCTCCATCACCCACTCACATTAC | + |
|
Preference number: 3 (lower is better) Translates to: DCFRLYRITHSR*TASASITHSHY Trigger: GTAATGTGAGTGGGTGATGGAGGCTGAAGCAGTCCATCGTGAGTGAGTGATGCGATAGAGGCGGAAGCAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACCTTCATCTCACAGGGCATTTATAAGTCAGTCACAGGGCGCGCACAGCCCACCTTTACATTTCCTCTaGATTCTGGAGGTGGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GPSSHRAFISQSQGAHSPPLHFL*ILEVGV Trigger: AACCCCCACCTCCAGAATCAAGAGGAAATGTAAAGG...TGGGCTGTGCGCGCCCTGTGACTGACTTATAAATGCCCTGTGAGATGAAGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACACTAGCTCAAGAAACATaGCAAACAAGGCTGGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KAGAARSIRTQVFCPCTTLAQET*QTRLVL Trigger: CAGCACCAGCCTTGTTTGCAATGTTTCTTGAGCTAG...TGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGAGGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGTCAAGGGTCTGCACTTaGCATGGTGTCAGTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IRGFIRKVTEEIMRGKRASRVCT*HGVSLH Trigger: ATGAAGACTGACACCATGCAAAGTGCAGACCCTTGA...CGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCCTCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTGGTTGTGGGCACCGTCTGTCCCACACTGTCTTTCACCTTCCCTGAAAGAAGCAGGAGGAACACTTaGCTGTCAGGCTTGACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLVVGTVCPTLSFTFPERSRRNT*LSGLTL Trigger: CAAGGTCAAGCCTGACAGCAAAGTGTTCCTCCTGCT...TCTTTCAGGGAAGGTGAAAGACAGTGTGGGACAGACGGTGCCCACAACCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCAACTGCTGCTGCCCCTGTACGCTGCTTaGGTAATTCAGGCGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: YNHLVEYALSTRATQLLLPLYAA*VIQART Trigger: AGTTCTCGCCTGAATTACCAAAGCAGCGTACAGGGG...CAGCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR TCA 72 bp | ACCAGATGTGAAGAGACTGAAGAGCCAGCAGCCCCTTaGGAGAAGCGTCTGAAGACACACATGGGAAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TRCEETEEPAAP*EKRLKTHMGKA Trigger: AGCTTTTCCCATGTGTGTCTTCAGACGCTTCTCTCAAGGGGCTGCTGGCTCTTCAGTCTCTTCACATCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | TGGCATACACACATCACAGCAGAGCAAGGAGAGCCATaGCAATATCTAATCATACAGAGGGGGTGCGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: WHTHITAEQGEP*QYLIIQRGCVQ Trigger: CTGCACGCACCCCCTCTGTATGATTAGATATTGCCATGGCTCTCCTTGCTCTGCTGTGATGTGTGTATGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTGATGTGGGTTCTGCTGCTGTGGCTGGTTCTTGTCACCTTTCTCTTCTGGTCAAGGGTCTGCACTTaGCATGGTGTCAGTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLMWVLLLWLVLVTFLFWSRVCT*HGVSLH Trigger: ATGAAGACTGACACCATGCAAAGTGCAGACCCTTGA...CCAGAAGAGAAAGGTGACAAGAACCAGCCACAGCAGCAGAACCCACATCAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCTGCAAAGACCTACACTGTTTTTGGTTGTGGGCACCGTCTGTCCCACACTCCTTTACATTTCCTCTaGATTCTGGAGGTGGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VAAKTYTVFGCGHRLSHTPLHFL*ILEVGV Trigger: AACCCCCACCTCCAGAATCAAGAGGAAATGTAAAGG...AGTGTGGGACAGACGGTGCCCACAACCAAAAACAGTGTAGGTCTTTGCAGCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACAAGTCTTTCTGAAGTGTaGGGTACTCTGGCATTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KAGAARSIRTQVFCPCTTSLSEV*GTLAFF Trigger: GAAAAATGCCAGAGTACCCAACACTTCAGAAAGACT...TGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCAACTGCTGCTGAAGTCTGAGGTGATTCTCTaGGTTGGATCCATGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NHLVEYALSTRATQLLLKSEVIL*VGSMVR Trigger: CCTCACCATGGATCCAACCAAGAGAATCACCTCAGA...CTTCAGCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | AGAGAAAATCAAAGGGCCAGAATCAGTGCAGTGATGTaGCACCCAGCTGTACAGAGAGTGGAGTTTTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RENQRARISAVM*HPAVQRVEFSG Trigger: GCCAGAAAACTCCACTCTCTGTACAGCTGGGTGCCACATCACTGCACTGATTCTGGCCCTTTGATTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CATAGACTATGGCCTTCATGTATACGAAAGGCTTCGCTTCCTTCACAGAGAAAGCTGAGGGTAGCAGGCTaGGCATACACACATCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: HRLWPSCIRKASLPSQRKLRVAG*AYTHHS Trigger: GCTGTGATGTGTGTATGCCAAGCCTGCTACCCTCAG...CTTTCTCTGTGAAGGAAGCGAAGCCTTTCGTATACATGAAGGCCATAGTCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACAGATGAAAAGGATTGCTaGTTTTTATATCCTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTDEKDC*FLYPPD Trigger: GTCAGGAGGATATAAAAACAAGCAATCCTTTTCATC...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCATGTCACATGTCAATGACTTCATTTTCGGCCCTGGTATGCATGCCACCATGCTGTGGCTGGTTCTaGTCACCTTTCTCTTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: EACHMSMTSFSALVCMPPCCGWF*SPFSSG Trigger: ACCAGAAGAGAAAGGTGACAAGAACCAGCCACAGCA...TGGTGGCATGCATACCAGGGCCGAAAATGAAGTCATTGACATGTGACATGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCTGCACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAATGCTGTGGCTGGTTCTaGTCACCTTTCTCTTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GSALCMVSVFILGVFVTQCCGWF*SPFSSG Trigger: ACCAGAAGAGAAAGGTGACAAGAACCAGCCACAGCA...TTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGTGCAGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCTTTTATTAAATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCCGGGCCCGCCTGAGTTaGCACCGGAAGGCCCAATCC | + |
|
Preference number: 3 (lower is better) Translates to: MSFIKLSSFEGKNRASIFRARLS*HRKAQS Trigger: GGATTGGGCCTTCCGGTGCAAACTCAGGCGGGCCCG...GAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTCTCTTTTGGGGTACGGAATCTGGCAGCCAGCGAACACATCTAATGTTGGCCCCATGTCAGCTATTTaGACTCTCCCCCTTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NSLLGYGIWQPANTSNVGPMSAI*TLPLSG Trigger: TCCTGAAAGGGGGAGAGTCAAAATAGCTGACATGGG...GCCAACATTAGATGTGTTCGCTGGCTGCCAGATTCCGTACCCCAAAAGAGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | TATCGCAGCTGGAAGAGTCACTTTGAGAAGGGTGGCTaGATAAATCCAGAGCAAAAGCACCCAGTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: YRSWKSHFEKGG*INPEQKHPVLK Trigger: CTTCAGAACTGGGTGCTTTTGCTCTGGATTTATCCAGCCACCCTTCTCAAAGTGACTCTTCCAGCTGCGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR CCA 72 bp | TCTTCATTAAGGAATTCTCTTTTGGGGTACGGAATCTaGCAGCCAGCGAACACATCTAATGTTGGCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SSLRNSLLGYGI*QPANTSNVGRG Trigger: CCCCCTGCCAACATTAGATGTGTTCGCTGGCTGCCAGATTCCGTACCCCAAAAGAGAATTCCTTAATGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCAACTGCTGCTGAAGGACAAAGTGCCCTGTTaGAGTCAGTTTTACCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: NHLVEYALSTRATQLLLKDKVPC*SQFYQN Trigger: GTTCTGGTAAAACTGACTCAAACAGGGCACTTTGTC...CTTCAGCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCTGCACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAAGATGTCAATGGCCTTaGTGTAATGCCTGGCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: GSALCMVSVFILGVFVTQRCQWP*CNAWHQ Trigger: TTGGTGCCAGGCATTACACAAAGGCCATTGACATCT...TTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGTGCAGACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CATAGACTATGGCCTTCATGTATACGAAAGGCTTCGCTTCCTTCACAGAGAAAGCGAACACATCTAATGTaGGCAGGGGGTCTTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HRLWPSCIRKASLPSQRKRTHLM*AGGLPG Trigger: TCCAGGAAGACCCCCTGCCAACATTAGATGTGTTCG...CTTTCTCTGTGAAGGAAGCGAAGCCTTTCGTATACATGAAGGCCATAGTCTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTTCCGGGGCTTCTTGTTaGGAGGCACCTGATTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QGTGQNFILIVTLCTRLISGASC*EAPDSA Trigger: GGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCGGA...AATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCAAGTGCTCAGACACAGACCTGCTTCCCCATAACACTGTTTACCATAAATCAAGGGTCTGCACTTaGCATGGTGTCAGTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLKCSDTDLLPHNTVYHKSRVCT*HGVSLH Trigger: ATGAAGACTGACACCATGCAAAGTGCAGACCCTTGA...TTTATGGTAAACAGTGTTATGGGGAAGCAGGTCTGTGTCTGAGCACTTGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAATCAGTTCATGAAGTATAAAACTATACACCACTGGAACCCTGTGCCTACAAGAGCCAGCAGCCCCTaGAGAGAAGCGTCTGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LNQFMKYKTIHHWNPVPTRASSP*REASED Trigger: GTCTTCAGACGCTTCTCTCAAGGGGCTGCTGGCTCT...TGTAGGCACAGGGTTCCAGTGGTGTATAGTTTTATACTTCATGAACTGATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCAACTGCTGCTGAAGACTTATCCAAGTGGGTaGAGAAGTAAACAAAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: NHLVEYALSTRATQLLLKTYPSG*RSKQRT Trigger: GGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGT...CTTCAGCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGTCTGAAGACACACATGGGAAAAGCTTTTCCTTCACGTGGAAGAAGCGTGCTAGTCTTTCTGAAGTGTaGGGTACTCTGGCATTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASEDTHGKSFSFTWKKRASLSEV*GTLAFF Trigger: GAAAAATGCCAGAGTACCCAACACTTCAGAAAGACT...AGCACGCTTCTTCCACGTGAAGGAAAAGCTTTTCCCATGTGTGTCTTCAGACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR TCA 72 bp | CAAGAAGAGAAAATCAAAGGGCCAGAATCAGTGCAGTaGTGTGGCACCCAGCTGTACAGAGAGTGGAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: QEEKIKGPESVQ*CGTQLYREWSF Trigger: AAAACTCCACTCTCTGTACAGCTGGGTGCCACATCACTGCACTGATTCTGGCCCTTTGATTTTCTCTTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR GCA 72 bp | AAACACTTAGCATGCAAAGGTTTCCTCTCAAGGGTCTaGACTTTGCATGGTGTCAGTCTTCATTCTGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KHLACKGFLSRV*TLHGVSLHSGG Trigger: ACCCCCAGAATGAAGACTGACACCATGCAAAGTGCAGACCCTTGAGAGGAAACCTTTGCATGCTAAGTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGCATCCTTATGCTGAAATCAGTGTGGTCCTGGCTGGCTACAGTATCACATTCAAGGGTCTGCACTTaGCATGGTGTCAGTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ISILMLKSVWSWLATVSHSRVCT*HGVSLH Trigger: ATGAAGACTGACACCATGCAAAGTGCAGACCCTTGA...ATGTGATACTGTAGCCAGCCAGGACCACACTGATTTCAGCATAAGGATGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCTGCAAAGACCTACACTGTTTTTGGTTGTGGGCACCGTCTGTCCCACACTCAATACAAAAGATTCTaGACAGCGTTAAGTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VAAKTYTVFGCGHRLSHTQYKRF*TALSLS Trigger: ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTG...AGTGTGGGACAGACGGTGCCCACAACCAAAAACAGTGTAGGTCTTTGCAGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR GCA 72 bp | TGTCCCCAGAGGCCCGAATCCTTCTCCCAAACACCTTaGCACAAAGCTACATCTAAAAGTGACTTAATACAA | + |
|
Preference number: 3 (lower is better) Translates to: CPQRPESFSQTP*HKATSKSDLIQ Trigger: TTGTATTAAGTCACTTTTAGATGTAGCTTTGTGGCAAGGTGTTTGGGAGAAGGATTCGGGCCTCTGGGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCAAGTGCTCAGACACAGACCTGCTTCCCCATAACACTGTTTACCATAAAACTTATCCAAGTGGGTaGAGAAGTAAACAAAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: LLKCSDTDLLPHNTVYHKTYPSG*RSKQRT Trigger: GGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGT...TTTATGGTAAACAGTGTTATGGGGAAGCAGGTCTGTGTCTGAGCACTTGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCAACTGCTGCTGGATGAAAAGGATTGCTaGTTTTTATATCCTCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: YNHLVEYALSTRATQLLLDEKDC*FLYPPD Trigger: GTCAGGAGGATATAAAAACAAGCAATCCTTTTCATC...CAGCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTTCCGGGGCTTCTTGTTaGGAGGCACCTGATTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KRKHSVQYKRFLTALSLSSGASC*EAPDSA Trigger: GGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCGGA...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAATCAGTTCATGAAGTATAAAACTATACACCACTGGAACCCTGTGCCTACACCCCTGTACGCTGCTTaGGTAATTCAGGCGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: LNQFMKYKTIHHWNPVPTPLYAA*VIQART Trigger: AGTTCTCGCCTGAATTACCAAAGCAGCGTACAGGGG...TGTAGGCACAGGGTTCCAGTGGTGTATAGTTTTATACTTCATGAACTGATTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTCTTAGACCTACACTGTTTTaGGTTGTGGGCACCGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GTGQNFILIVTLCTRLILRPTLF*VVGTVC Trigger: ACAGACGGTGCCCACAACCAAAAACAGTGTAGGTCT...AAGAATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTTTTAAAGTAGACTTACCTTTACATTTCCTCTaGATTCTGGAGGTGGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PKGLDSVKALETSFKVDLPLHFL*ILEVGV Trigger: AACCCCCACCTCCAGAATCAAGAGGAAATGTAAAGG...TAAGTCTACTTTAAAAGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTTTTAAAGTAGACTTACTAGCTCAAGAAACATaGCAAACAAGGCTGGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PKGLDSVKALETSFKVDLLAQET*QTRLVL Trigger: CAGCACCAGCCTTGTTTGCAATGTTTCTTGAGCTAG...TAAGTCTACTTTAAAAGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGCGAACACATCTAATGTaGGCAGGGGGTCTTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QKKAFSAIQKILDSVKSQRTHLM*AGGLPG Trigger: TCCAGGAAGACCCCCTGCCAACATTAGATGTGTTCG...CTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTCTTAGATGTCAATGGCCTTaGTGTAATGCCTGGCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: GTGQNFILIVTLCTRLILRCQWP*CNAWHQ Trigger: TTGGTGCCAGGCATTACACAAAGGCCATTGACATCT...AAGAATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAACTGATCATGATGAAAAGGATTGCTTGTTTTTATATCCTCCTGACGACAGTTCTGAGGTGATTCTCTaGGTTGGATCCATGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTDHDEKDCLFLYPPDDSSEVIL*VGSMVR Trigger: CCTCACCATGGATCCAACCAAGAGAATCACCTCAGA...ACTGTCGTCAGGAGGATATAAAAACAAGCAATCCTTTTCATCATGATCAGTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR TCA 72 bp | GCTGTGAACATTTCAAATATGCATAGATGCCTTTTGTaGCAGCTAATCACTGGCTTTCTCCTCAAGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: AVNISNMHRCLL*QLITGFLLKCS Trigger: TGAGCACTTGAGGAGAAAGCCAGTGATTAGCTGTCACAAAAGGCATCTATGCATATTTGAAATGTTCACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR TCA 72 bp | CTGCTGTTGGCGTACGTTGTTCTTCGAAAGTCTTTCTaGAGTGTTGGGTACTCTGGCATTTTTCTAATATCT | + |
|
Preference number: 3 (lower is better) Translates to: LLLAYVVLRKSF*SVGYSGIFLIS Trigger: AGATATTAGAAAAATGCCAGAGTACCCAACACTTCAGAAAGACTTTCGAAGAACAACGTACGCCAACAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTGTAATTCTCTACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCAATACAAAAGATTCTaGACAGCGTTAAGTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HCNSLQPLSRICSVHKGHQYKRF*TALSLS Trigger: ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTG...GTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTAGAGAATTACAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACAAGAATCCTCTTTTAGTCAATGAAGAAGAGAGCTTAGTCCTTCAAAACCCATTACTAGGATATTaGCTGGTTTCAGGTCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHKNPLLVNEEESLVLQNPLLGY*LVSGPC Trigger: ACAGGGACCTGAAACCAGCAAATATCCTAGTAATGG...GTTTTGAAGGACTAAGCTCTCTTCTTCATTGACTAAAAGAGGATTCTTGTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215000.2 |
||
| 3UTR TCA 72 bp | TGGCTATGTCCTGGAAAACACTATATTGGAAGCAAATaGCAAAGTGCCCTGTTTGAGTCAGTTTTACCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WLCPGKHYIGSK*QSALFESVLPE Trigger: TTCTGGTAAAACTGACTCAAACAGGGCACTTTGTCATTTGCTTCCAATATAGTGTTTTCCAGGACATAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTCAATACAAAAGATTCTaGACAGCGTTAAGTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QGTGQNFILIVTLCTRLIQYKRF*TALSLS Trigger: ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTG...AATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCTTTTATTAAATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCCTGTCAGGCTTGACCTaGTGCTTCTCCATGTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: MSFIKLSSFEGKNRASIFLSGLT*CFSMYF Trigger: AAAATACATGGAGAAGCACAAGGTCAAGCCTGACAG...GAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCTTTTATTAAATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCCAATACAAAAGATTCTaGACAGCGTTAAGTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: MSFIKLSSFEGKNRASIFQYKRF*TALSLS Trigger: ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTG...GAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| 3UTR CAA 72 bp | CCCCCGCCTCCCGCAGTGGCTCCCCCAGCAGTTCCATaGGTTTGGGCACTGCTCTGCTGTGGTGGAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPPAVAPPAVP*VWALLCCGGGA Trigger: GGCTCCTCCACCACAGCAGAGCAGTGCCCAAACCAATGGAACTGCTGGGGGAGCCACTGCGGGAGGCGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACACCCCCGCCTCCCGCAGTaGCTCCCCCAGCAGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLVLLGASEHRCSAPALHPRLPQ*LPQQFH Trigger: ATGGAACTGCTGGGGGAGCCACTGCGGGAGGCGGGG...GTGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | AAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACACCCCGCCTCCCGCAGTaGCTCCCCCAGCAGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAGAARSIRTQVFCPCTTPRLPQ*LPQQFH Trigger: ATGGAACTGCTGGGGGAGCCACTGCGGGAGGCGGGG...TGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| 3UTR CAA 72 bp | AGTTTGCACCGGAAGGCCCAATCCGGGGCTTCTTGTTaGGAGGCACCTGATTCAGCCCGGGGTCCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHRKAQSGASC*EAPDSARGPGC Trigger: ACAGCCAGGACCCCGGGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCGGATTGGGCCTTCCGGTGCAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTAGTGCAGGAAACAGGCTCTTCAGACTTCCCAGGTGAGTCCCAAAGGACTGGCACTGCTCTGCTGTaGTGGAGGAGCCTGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLVQETGSSDFPGESQRTGTALL*WRSLWG Trigger: CCCCCACAGGCTCCTCCACCACAGCAGAGCAGTGCC...AGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTGCACTAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | AACAAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTAGACATGCCCGTAGGTaGCGCGTCCCACTTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NKAGAARSIRTQVFCPCTRHARR*RVPLCT Trigger: GGTGCAAAGTGGGACGCGGCACCTACGGGCATGTCT...AGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTAGTGCAGGAAACAGGCTCTTCAGACTTCCCAGGTGAGTCCCAAAGGACTTTGTTTGGAGGCACCTaGTTCAGCCCGGGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLVQETGSSDFPGESQRTLFGGT*FSPGSW Trigger: CCAGGACCCCGGGCTGAATCAGGTGCCTCCAAACAA...AGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTGCACTAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | CCCCCGCCTCCCGCAGTGGCTCCCCCAGCAGTTCCATTGGTTTGGGCACTGCTCCCTGTGCCTTCGATTTaGTTAAGTGCATATTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPPPAVAPPAVPLVWALLPVPSI*LSAYSF Trigger: AAAGGAATATGCACTTAAGCAAATCGAAGGCACAGG...GAGCAGTGCCCAAACCAATGGAACTGCTGGGGGAGCCACTGCGGGAGGCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | TCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACACTTCACAAGAATCCTCGTTTGGGCACTGCTCTaGTGTGGTGGAGGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQRKSCGGRGRGHFTRILVWALL*CGGGAC Trigger: ACAGGCTCCTCCACCACAGCAGAGCAGTGCCCAAAC...GAGGATTCTTGTGAAGTGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | AACAAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTGGTTTCAGGTCCCTGTaGAGCACCCAGTTTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKAGAARSIRTQVFCPCTGFRSL*STQFAW Trigger: CCACGCAAACTGGGTGCTCCACAGGGACCTGAAACC...AGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | ACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTGGCACTGCTCTGCTGTaGTGGAGGAGCCTGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSQVSPKGLDSVKALETSGTALL*WRSLWG Trigger: CCCCCACAGGCTCCTCCACCACAGCAGAGCAGTGCC...AGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR TCA 90 bp | GGACCTTCATCTCACAGGGCATTTATAAGTCAGTCACAGGGCGCGCACAGCCCACTGCAGAGCCTGCTCTaGGGTGATTCTCTTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPSSHRAFISQSQGAHSPLQSLL*GDSLGW Trigger: CCAACCAAGAGAATCACCTCAGAGCAGGCTCTGCAG...TGGGCTGTGCGCGCCCTGTGACTGACTTATAAATGCCCTGTGAGATGAAGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | TCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACACTTCACAAGAATCCTCGTGGAGCACCCAGTTTaGGTGGAGGTAATGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQRKSCGGRGRGHFTRILVEHPV*VEVMDA Trigger: GGCATCCATTACCTCCACGCAAACTGGGTGCTCCAC...GAGGATTCTTGTGAAGTGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR CCA 90 bp | GAACGAGGAATGAAGCGGCGAGCAAGTGTGAACAAGAGGCCATTCCTTCCCATCGGTTTCAGGTCCCTGTaGAGCACCCAGTTTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERGMKRRASVNKRPFLPIGFRSL*STQFAW Trigger: CCACGCAAACTGGGTGCTCCACAGGGACCTGAAACC...GATGGGAAGGAATGGCCTCTTGTTCACACTTGCTCGCCGCTTCATTCCTCGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
||
| CDS-3UTR CCA 90 bp | TCAGTCACAGGGCGCGCACAGCCCACAGGAGCTTATGATCACTGGACTGGCTGCTTCTGCTGCTGTGGCTaGTTCTTGTCACCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVTGRAQPTGAYDHWTGCFCCCG*FLSPFS Trigger: AGAGAAAGGTGACAAGAACCAGCCACAGCAGCAGAA...GCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCTGTGCGCGCCCTGTGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | GTCCTAGTGCAGGAAACAGGCTCTTCAGACTTCCCAGGTGAGTCCCAAAGGACTTGCCGCGTCCCACTTTaGACCCTTCGTACTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VLVQETGSSDFPGESQRTCRVPL*TLRTQT Trigger: TGTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCA...AGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTGCACTAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAACAGGCTCTTCAGACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTTGCCGCGTCCCACTTTaGACCCTTCGTACTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QETGSSDFPGESQRTGFRCRVPL*TLRTQT Trigger: TGTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCA...ACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGTCTGAAGAGCCTGTTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR CCA 90 bp | ATTAGCATCACTCCCTATAGAAAACAGCCTGGAAGGGTAAGTACCCCCGGGTACCCGGGGCTTCTTGTTTaGAGGCACCTGATTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISITPYRKQPGRVSTPGYPGLLV*RHLIQP Trigger: GGGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCGG...GTACCCGGGGGTACTTACCCTTCCAGGCTGTTTTCTATAGGGAGTGATGCTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
||
| CDS-3UTR GCA 90 bp | TCAGTCACAGGGCGCGCACAGCCCACAGGAGCTTATGATCACTGGACTGGCTGCCCTGTGCCTTCGATTTaGTTAAGTGCATATTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVTGRAQPTGAYDHWTGCPVPSI*LSAYSF Trigger: AAAGGAATATGCACTTAAGCAAATCGAAGGCACAGG...GCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCTGTGCGCGCCCTGTGACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | ATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCATTGTAATTCTCTACCGGGGTCCTGGCTGTaGTGCAGCCCCGCTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IELIRGQEQSFYFHCNSLPGSWL*CSPAPA Trigger: CGCTGGAGCGGGGCTGCAGCACAGCCAGGACCCCGG...TAGAGAATTACAATGAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | GCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACACGGTGATTCTCTTGGTTaGATCCATGGTGAGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASSGKSQRKSCGGRGRGHGDSLG*IHGEEF Trigger: AAACTCCTCACCATGGATCCAACCAAGAGAATCACC...GTGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR TCA 90 bp | ACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCTTGTTTGGAGGCACCTaGTTCAGCCCGGGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLHGVSLHSGGLCNTNTTLFGGT*FSPGSW Trigger: CCAGGACCCCGGGCTGAATCAGGTGCCTCCAAACAA...GGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | GCGTCTGAAGACACACATGGGAAAAGCTTTTCCTTCACGTGGAAGAAGCGTGCTTGCCGCGTCCCACTTTaGACCCTTCGTACTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ASEDTHGKSFSFTWKKRACRVPL*TLRTQT Trigger: TGTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCA...AGCACGCTTCTTCCACGTGAAGGAAAAGCTTTTCCCATGTGTGTCTTCAGACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACACAGTTCTCTCAAAAGTaGAATCTCTCTACAAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTQFSQK*NLSTSR Trigger: TCGGCTTGTAGAGAGATTGCACTTTTGAGAGAACTG...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCACCAAGTAAAAGTTCCGGAGCCCGATACCAAAATGTCACAACCACTGCGTGGAGGTAATGGATaGCATCGAGGATCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: AWHQVKVPEPDTKMSQPLRGGNG*HRGSGT Trigger: TGTACCAGATCCTCGATGGCATCCATTACCTCCACG...CAGTGGTTGTGACATTTTGGTATCGGGCTCCGGAACTTTTACTTGGTGCCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCATGTCACATGTCAATGACTTCATTTTCGGCCCTGGTATGCATGCCACCAGGGTCCTGCAGAGCCTaGTCTGAGGTGATTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EACHMSMTSFSALVCMPPGSCRA*SEVILL Trigger: CAAGAGAATCACCTCAGAGCAGGCTCTGCAGGACCC...TGGTGGCATGCATACCAGGGCCGAAAATGAAGTCATTGACATGTGACATGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTCCGGGGTCCTGGCTGTaGTGCAGCCCCGCTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHSVQYKRFLTALSLSPGSWL*CSPAPA Trigger: CGCTGGAGCGGGGCTGCAGCACAGCCAGGACCCCGG...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCCTGCTGGAGTCCATGCAGGTTGCTGATGTaGGTTCTGCTGCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVFILGVFVTQIPPCWSPCRLLM*VLLLWL Trigger: CAGCCACAGCAGCAGAACCCACATCAGCAACCTGCA...TGGACTCCAGCAGGGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGTGCTGGGTAGATCAGAGGCTTCATCAGGAAAGTCACAGAGGAAATCACCCCAGCAGTTCCATTaGTTTGGGCACTGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AEVLGRSEASSGKSQRKSPQQFH*FGHCSA Trigger: AGCAGAGCAGTGCCCAAACCAATGGAACTGCTGGGG...TGATTTCCTCTGTGACTTTCCTGATGAAGCCTCTGATCTACCCAGCACTTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCCTGCTGGAGTCCACCCCAGCAGTTCCATTaGTTTGGGCACTGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVFILGVFVTQIPPCWSPPQQFH*FGHCSA Trigger: AGCAGAGCAGTGCCCAAACCAATGGAACTGCTGGGG...TGGACTCCAGCAGGGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| 3UTR CAA 72 bp | GGGAAAAGCTTTTCCTTCACGTGGAAGAAGCGTGCTTaGATCAGCGTGACTCCTTGTGAGGTCCTAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKSFSFTWKKRA*ISVTPCEVLVQ Trigger: CTGCACTAGGACCTCACAAGGAGTCACGCTGATCAAAGCACGCTTCTTCCACGTGAAGGAAAAGCTTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR TCA 90 bp | AACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCAACTGCTGCTGAAGCCATGTCAGCTATTTTaGCTCTCCCCCTTTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NHLVEYALSTRATQLLLKPCQLF*LSPFQD Trigger: GTCCTGAAAGGGGGAGAGTCAAAATAGCTGACATGG...CTTCAGCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
||
| CDS-3UTR TCA 90 bp | ACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTCTTTGCTGTCAGGCTTaGCCTTGTGCTTCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TSQVSPKGLDSVKALETSLCCQA*PCASPC Trigger: ACATGGAGAAGCACAAGGTCAAGCCTGACAGCAAAG...AGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR TCA 90 bp | ACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTCCCAGATGTCTATTTTaGCTCTCCCCCTTTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSQVSPKGLDSVKALETSPRCLF*LSPFQD Trigger: GTCCTGAAAGGGGGAGAGTCAAAATAGACATCTGGG...AGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | CATTGTAATTCTCTACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCTGCTGTGCGGGGGCTaGAGGTTGCTGATGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HCNSLQPLSRICSVHKGHLLCGG*RLLMWV Trigger: AACCCACATCAGCAACCTGCAGCCCCCGCACAGCAG...GTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTAGAGAATTACAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR TCA 90 bp | TTTTTGGTTGTGGGCACCGTCTGTCCCACACTGTCTTTCACCTTCCCTGAAAGACTTCGAAAGTCTTTCTaGAGTGTTGGGTACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLVVGTVCPTLSFTFPERLRKSF*SVGYSG Trigger: GCCAGAGTACCCAACACTTCAGAAAGACTTTCGAAG...TCTTTCAGGGAAGGTGAAAGACAGTGTGGGACAGACGGTGCCCACAACCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | ACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCGTGGAGCACCCAGTTTaGGTGGAGGTAATGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLHGVSLHSGGLCNTNTTVEHPV*VEVMDA Trigger: GGCATCCATTACCTCCACGCAAACTGGGTGCTCCAC...GGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR CCA 90 bp | ATTAGCATCACTCCCTATAGAAAACAGCCTGGAAGGGTAAGTACCCCCGGGTACTTGCCCAGATGTCAATaGCCTTTGTGTAATGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISITPYRKQPGRVSTPGYLPRCQ*PLCNAW Trigger: CCAGGCATTACACAAAGGCCATTGACATCTGGGCAA...GTACCCGGGGGTACTTACCCTTCCAGGCTGTTTTCTATAGGGAGTGATGCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
||
| CDS-3UTR CCA 90 bp | GCCATGGCAATATCTAATCATACAGAGGGGGTGCGTGCAGAAAATGACCAAAAATGCAGGTTGCTGATGTaGGTTCTGCTGCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AMAISNHTEGVRAENDQKCRLLM*VLLLWL Trigger: CAGCCACAGCAGCAGAACCCACATCAGCAACCTGCA...TTTTTGGTCATTTTCTGCACGCACCCCCTCTGTATGATTAGATATTGCCATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
||
| CDS-3UTR TCA 90 bp | CCATTAGAGGACCCACCCCATAGACTATGGCCTTCATGTATACGAAAGGCTTCGGATCTGGTACAGCAGTaGTTTAACCATGGATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLEDPPHRLWPSCIRKASDLVQQ*FNHGSW Trigger: CCAAGATCCATGGTTAAATCACTGCTGTACCAGATC...CGAAGCCTTTCGTATACATGAAGGCCATAGTCTATGGGGTGGGTCCTCTAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGCAAAGACCTACACTGTTTTTGGTTGTGGGCACCGTCTGTCCCACACTCAGTTCTCTCAAAAGTaGAATCTCTCTACAAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VAAKTYTVFGCGHRLSHTQFSQK*NLSTSR Trigger: TCGGCTTGTAGAGAGATTGCACTTTTGAGAGAACTG...AGTGTGGGACAGACGGTGCCCACAACCAAAAACAGTGTAGGTCTTTGCAGCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCACCAAGTAAAAGTTCCGGAGCCCGATACCAAAATGTCACAACCACTGGCGATCACATTAGGGTaGTTCAGTTCTCTCAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AWHQVKVPEPDTKMSQPLAITLG*FSSLKS Trigger: ACTTTTGAGAGAACTGAAGCACCCTAATGTGATCGC...CAGTGGTTGTGACATTTTGGTATCGGGCTCCGGAACTTTTACTTGGTGCCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGAGGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGTCAGGCTTGACCTTGTaGTTCTCCATGTATTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: IRGFIRKVTEEIMRGKRASGLTL*FSMYFM Trigger: CATAAAATACATGGAGAAGCACAAGGTCAAGCCTGA...CGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCCTCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | AAGCATACTTATCCAAGTGGGTTGAGAAGTAAACAAAGGACCTTCATCTCACAGGTTTGGGCACTGCTCTaGTGTGGTGGAGGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KHTYPSGLRSKQRTFISQVWALL*CGGGAC Trigger: ACAGGCTCCTCCACCACAGCAGAGCAGTGCCCAAAC...CTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | ACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCAGGACCCCTGTACGCTaGTTTGGTAATTCAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLHGVSLHSGGLCNTNTTRTPVR*FGNSGE Trigger: CTCGCCTGAATTACCAAAGCAGCGTACAGGGGTCCT...GGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CCA 90 bp | AGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTACACATCTTGGTAACTGCATaGGCTTTTTATTTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVLLGASEHRCSAPALHILVTA*AFYLLL Trigger: CAAAAGCAAATAAAAAGCCCATGCAGTTACCAAGAT...GTGTAGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
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| CDS-3UTR CCA 90 bp | GGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGGGGACAATCTTGGTAACTGCATaGGCTTTTTATTTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFIRKVTEEIMRGKRAGTILVTA*AFYLLL Trigger: CAAAAGCAAATAAAAAGCCCATGCAGTTACCAAGAT...TGTCCCCGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
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| CDS-3UTR CCA 90 bp | TTTTTGGTTGTGGGCACCGTCTGTCCCACACTGTCTTTCACCTTCCCTGAAAGACCTTTGTGTAATGCCTaGCACCAAGTAAAAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FLVVGTVCPTLSFTFPERPLCNA*HQVKVP Trigger: CGGAACTTTTACTTGGTGCCAGGCATTACACAAAGG...TCTTTCAGGGAAGGTGAAAGACAGTGTGGGACAGACGGTGCCCACAACCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
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| CDS-3UTR CCA 90 bp | CCATTAGAGGACCCACCCCATAGACTATGGCCTTCATGTATACGAAAGGCTTCGAATTCAGGCGAGAACTaGAATGCTGATAATCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: PLEDPPHRLWPSCIRKASNSGEN*NADNPT Trigger: CGTCGGATTATCAGCATTCCAGTTCTCGCCTGAATT...CGAAGCCTTTCGTATACATGAAGGCCATAGTCTATGGGGTGGGTCCTCTAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
||
| CDS-3UTR TCA 90 bp | CTCCTCAAGTGCTCAGACACAGACCTGCTTCCCCATAACACTGTTTACCATAAACTTCGAAAGTCTTTCTaGAGTGTTGGGTACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKCSDTDLLPHNTVYHKLRKSF*SVGYSG Trigger: GCCAGAGTACCCAACACTTCAGAAAGACTTTCGAAG...TTTATGGTAAACAGTGTTATGGGGAAGCAGGTCTGTGTCTGAGCACTTGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR GCA 90 bp | GTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCCTGCTGGAGTCCGCGATCACATTAGGGTaGTTCAGTTCTCTCAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLHSGGLCNTNTTLLESAITLG*FSSLKS Trigger: ACTTTTGAGAGAACTGAAGCACCCTAATGTGATCGC...GGACTCCAGCAGGGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
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| CDS-3UTR TCA 90 bp | CAGGGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTACCTTCCTGTCGCTGTaGGAAAGGAACACCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGTGQNFILIVTLCTRLITFLSL*ERNTFC Trigger: GCAGAAGGTGTTCCTTTCTCACAGCGACAGGAAGGT...AATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
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| CDS-3UTR TCA 90 bp | CTCCTCAAGTGCTCAGACACAGACCTGCTTCCCCATAACACTGTTTACCATAAAGATCTGGTACAGCAGTaGTTTAACCATGGATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKCSDTDLLPHNTVYHKDLVQQ*FNHGSW Trigger: CCAAGATCCATGGTTAAATCACTGCTGTACCAGATC...TTTATGGTAAACAGTGTTATGGGGAAGCAGGTCTGTGTCTGAGCACTTGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
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| CDS-3UTR GCA 90 bp | ATGGAAATGCAAATATTCACCTCATCTACTTTACACTATCTGCCCATAGTTCTTCTGCTGTGCGGGGGCTaGAGGTTGCTGATGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MEMQIFTSSTLHYLPIVLLLCGG*RLLMWV Trigger: AACCCACATCAGCAACCTGCAGCCCCCGCACAGCAG...AAGAACTATGGGCAGATAGTGTAAAGTAGATGAGGTGAATATTTGCATTTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | AGCCCACAGGAGCTTATGATCACTGGACTGGCTGCAATAAGGAAATGTCTCCCAGTCTTTCTGAAGTGTTaGGTACTCTGGCATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQELMITGLAAIRKCLPVFLKC*VLWHFS Trigger: AGAAAAATGCCAGAGTACCCAACACTTCAGAAAGAC...TGGGAGACATTTCCTTATTGCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | ATAAGCATCCTTATGCTGAAATCAGTGTGGTCCTGGCTGGCTACAGTATCACATTTCTGCTGCTGTGGCTaGTTCTTGTCACCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISILMLKSVWSWLATVSHFCCCG*FLSPFS Trigger: AGAGAAAGGTGACAAGAACCAGCCACAGCAGCAGAA...ATGTGATACTGTAGCCAGCCAGGACCACACTGATTTCAGCATAAGGATGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | TATTTTACTTGTATATGGACCCCAGAGTATCATAACCAGGTAGATAGGTTCACACCGGGGCTTCTTGTTTaGAGGCACCTGATTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YFTCIWTPEYHNQVDRFTPGLLV*RHLIQP Trigger: GGGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCGG...TGTGAACCTATCTACCTGGTTATGATACTCTGGGGTCCATATACAAGTAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR TCA 90 bp | AGCCCACAGGAGCTTATGATCACTGGACTGGCTGCAATAAGGAAATGTCTCCCAGCTTTTGATGCACGGTaGAACTTAATAATATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPQELMITGLAAIRKCLPAFDAR*NLIICQ Trigger: TTGGCATATTATTAAGTTTCACCGTGCATCAAAAGC...TGGGAGACATTTCCTTATTGCAGCCAGTCCAGTGATCATAAGCTCCTGTGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR TCA 90 bp | ACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTGCTTTTGATGCACGGTaGAACTTAATAATATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSQVSPKGLDSVKALETSAFDAR*NLIICQ Trigger: TTGGCATATTATTAAGTTTCACCGTGCATCAAAAGC...AGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGCATCCTTATGCTGAAATCAGTGTGGTCCTGGCTGGCTACAGTATCACATGATCTGGTACAGCAGTaGTTTAACCATGGATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISILMLKSVWSWLATVSHDLVQQ*FNHGSW Trigger: CCAAGATCCATGGTTAAATCACTGCTGTACCAGATC...ATGTGATACTGTAGCCAGCCAGGACCACACTGATTTCAGCATAAGGATGCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGCATCCTTATGCTGAAATCAGTGTGGTCCTGGCTGGCTACAGTATCACATGCTTTAGGGGAGAATTaGATAACCTGGCAAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISILMLKSVWSWLATVSHALGEN*ITWQNP Trigger: TGGGTTTTGCCAGGTTATTCAATTCTCCCCTAAAGC...ATGTGATACTGTAGCCAGCCAGGACCACACTGATTTCAGCATAAGGATGCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
||
| CDS-3UTR TCA 90 bp | AAGCATACTTATCCAAGTGGGTTGAGAAGTAAACAAAGGACCTTCATCTCACAGTGGTTGGATCCATGGTaGGGAGTTTCTGAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KHTYPSGLRSKQRTFISQWLDPW*GVSEAG Trigger: TCCTGCTTCAGAAACTCCTCACCATGGATCCAACCA...CTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | ATAAGCATCCTTATGCTGAAATCAGTGTGGTCCTGGCTGGCTACAGTATCACATGAAAGGAACACCTTCTaGAATGCGATCACATTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISILMLKSVWSWLATVSHERNTF*NAITLG Trigger: CCCTAATGTGATCGCATTGCAGAAGGTGTTCCTTTC...ATGTGATACTGTAGCCAGCCAGGACCACACTGATTTCAGCATAAGGATGCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCCTGCTGGAGTCCATGGATCTTGGTAACTaGATGGGCTTTTTATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLHSGGLCNTNTTLLESMDLGN*MGFLFA Trigger: AGCAAATAAAAAGCCCATGCAGTTACCAAGATCCAT...GGACTCCAGCAGGGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGTATGCATGCCACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCGTGGAGGTAATGGATaGCATCGAGGATCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PGMHATIQPLLLFISILMRGGNG*HRGSGT Trigger: TGTACCAGATCCTCGATGGCATCCATTACCTCCACG...CATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGTGGCATGCATACCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | ACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCTGAAATCAGTGTGGGTGGAGCACCCAGTTTaGGTGGAGGTAATGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TIQPLLLFISILMLKSVWVEHPV*VEVMDA Trigger: GGCATCCATTACCTCCACGCAAACTGGGTGCTCCAC...CCACACTGATTTCAGCATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR TCA 90 bp | ACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCTGAAATCAGTGTGGACCTTCCTGTCGCTGTaGGAAAGGAACACCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TIQPLLLFISILMLKSVWTFLSL*ERNTFC Trigger: GCAGAAGGTGTTCCTTTCTCACAGCGACAGGAAGGT...CCACACTGATTTCAGCATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTGCCGCGTCCCACTTTaGACCCTTCGTACTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QKKAFSAIQKILDSVKSQCRVPL*TLRTQT Trigger: TGTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCA...CTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCTTATGATCACTGGACTGGCTGCAATAAGGAAATGTCTCCCACTCTTTATGCGATCACATTAGGGTaGTTCAGTTCTCTCAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAYDHWTGCNKEMSPTLYAITLG*FSSLKS Trigger: ACTTTTGAGAGAACTGAAGCACCCTAATGTGATCGC...ATAAAGAGTGGGAGACATTTCCTTATTGCAGCCAGTCCAGTGATCATAAGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTACTTGTATATGGACCCCAGAGTATCATAACCAGGTAGATAGGTTCACAAGGACCCCTGTACGCTaGTTTGGTAATTCAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YFTCIWTPEYHNQVDRFTRTPVR*FGNSGE Trigger: CTCGCCTGAATTACCAAAGCAGCGTACAGGGGTCCT...TGTGAACCTATCTACCTGGTTATGATACTCTGGGGTCCATATACAAGTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | CATTGTAATTCTCTACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACGGTGATTCTCTTGGTTaGATCCATGGTGAGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HCNSLQPLSRICSVHKGHGDSLG*IHGEEF Trigger: AAACTCCTCACCATGGATCCAACCAAGAGAATCACC...GTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTAGAGAATTACAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| 3UTR CAA 72 bp | TACCATAAAAGTCGGAAGCATACTTATCCAAGTGGGTaGAGAAGTAAACAAAGGACCTTCATCTCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YHKSRKHTYPSG*RSKQRTFISQG Trigger: GCCCTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTTCCGACTTTTATGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTACCTTCCTGTCGCTGTaGGAAAGGAACACCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRKHSVQYKRFLTALSLSTFLSL*ERNTFC Trigger: GCAGAAGGTGTTCCTTTCTCACAGCGACAGGAAGGT...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR TCA 90 bp | CAAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTGGTTGGATCCATGGTaGGGAGTTTCTGAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKKAFSAIQKILDSVKSQWLDPW*GVSEAG Trigger: TCCTGCTTCAGAAACTCCTCACCATGGATCCAACCA...CTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | CAGGGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTGAACACCTTCTGCAATaGGATCACATTAGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGTGQNFILIVTLCTRLIEHLLQ*DHIRVL Trigger: AAGCACCCTAATGTGATCGCATTGCAGAAGGTGTTC...AATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGTATGCATGCCACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGGAAAGGAACACCTTCTaGAATGCGATCACATTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGMHATIQPLLLFISILMERNTF*NAITLG Trigger: CCCTAATGTGATCGCATTGCAGAAGGTGTTCCTTTC...CATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGTGGCATGCATACCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGCACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAAAGTGTTGGGTACTCTaGCATTTTTCTAATATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSALCMVSVFILGVFVTQKCWVL*HFSNIF Trigger: GAAGATATTAGAAAAATGCCAGAGTACCCAACACTT...TTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGTGCAGACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | ACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCGTCTTTCTGAAGTGTTaGGTACTCTGGCATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLHGVSLHSGGLCNTNTTVFLKC*VLWHFS Trigger: AGAAAAATGCCAGAGTACCCAACACTTCAGAAAGAC...GGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR TCA 90 bp | ATGTCTTTTATTAAATTGAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCCTTTGCTGTCAGGCTTaGCCTTGTGCTTCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: MSFIKLSSFEGKNRASIFLCCQA*PCASPC Trigger: ACATGGAGAAGCACAAGGTCAAGCCTGACAGCAAAG...GAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTCAATTTAATAAAAGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | ATGGAAATGCAAATATTCACCTCATCTACTTTACACTATCTGCCCATAGTTCTTCGTGGAGGTAATGGATaGCATCGAGGATCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: MEMQIFTSSTLHYLPIVLRGGNG*HRGSGT Trigger: TGTACCAGATCCTCGATGGCATCCATTACCTCCACG...AAGAACTATGGGCAGATAGTGTAAAGTAGATGAGGTGAATATTTGCATTTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGGAACACCTTCTGCAATaGGATCACATTAGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKKAFSAIQKILDSVKSQEHLLQ*DHIRVL Trigger: AAGCACCCTAATGTGATCGCATTGCAGAAGGTGTTC...CTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR CCA 90 bp | ACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCTGAAATCAGTGTGGAATTCAGGCGAGAACTaGAATGCTGATAATCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: TIQPLLLFISILMLKSVWNSGEN*NADNPT Trigger: CGTCGGATTATCAGCATTCCAGTTCTCGCCTGAATT...CCACACTGATTTCAGCATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| 3UTR CAA 72 bp | AACACTATATTGGAAGCAAATGACAAAGTGCCCTGTTaGAGTCAGTTTTACCAGAACAGTCCTGTGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTILEANDKVPC*SQFYQNSPVNV Trigger: CACATTCACAGGACTGTTCTGGTAAAACTGACTCAAACAGGGCACTTTGTCATTTGCTTCCAATATAGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000215000.2 |
||
| CDS-3UTR TCA 90 bp | GAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCATTGTAATTCTCTACAAGTGAAAAATGGGTTCTaGAGTCAAGAGTTCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELIRGQEQSFYFHCNSLQVKNGF*SQEFSK Trigger: TTTGCTGAACTCTTGACTTCAGAACCCATTTTTCAC...TTGTAGAGAATTACAATGAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTGAACACCTTCTGCAATaGGATCACATTAGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRKHSVQYKRFLTALSLSEHLLQ*DHIRVL Trigger: AAGCACCCTAATGTGATCGCATTGCAGAAGGTGTTC...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTGAAAGGAACACCTTCTaGAATGCGATCACATTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHSVQYKRFLTALSLSERNTF*NAITLG Trigger: CCCTAATGTGATCGCATTGCAGAAGGTGTTCCTTTC...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | CCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTTTTAAAGTAGACTTAATGGATCTTGGTAACTaGATGGGCTTTTTATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKGLDSVKALETSFKVDLMDLGN*MGFLFA Trigger: AGCAAATAAAAAGCCCATGCAGTTACCAAGATCCAT...TAAGTCTACTTTAAAAGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTACTTGTATATGGACCCCAGAGTATCATAACCAGGTAGATAGGTTCACAGTGAAAAATGGGTTCTaGAGTCAAGAGTTCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFTCIWTPEYHNQVDRFTVKNGF*SQEFSK Trigger: TTTGCTGAACTCTTGACTTCAGAACCCATTTTTCAC...TGTGAACCTATCTACCTGGTTATGATACTCTGGGGTCCATATACAAGTAAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR GCA 90 bp | CTTCACAAGAATCCTCTTTTAGTCAATGAAGAAGAGAGCTTAGTCCTTCAAAACCCTGTGCCTTCGATTTaGTTAAGTGCATATTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHKNPLLVNEEESLVLQNPVPSI*LSAYSF Trigger: AAAGGAATATGCACTTAAGCAAATCGAAGGCACAGG...GTTTTGAAGGACTAAGCTCTCTTCTTCATTGACTAAAAGAGGATTCTTGTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTAAATATGCAGCCTATTaGCCAGATGTCAATGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRKHSVQYKRFLTALSLSKYAAY*PDVNGL Trigger: AAGGCCATTGACATCTGGGCAATAGGCTGCATATTT...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
||
| CDS-3UTR GCA 90 bp | CTTCACAAGAATCCTCTTTTAGTCAATGAAGAAGAGAGCTTAGTCCTTCAAAACTCAGGCTTGACCTTGTaGTTCTCCATGTATTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: LHKNPLLVNEEESLVLQNSGLTL*FSMYFM Trigger: CATAAAATACATGGAGAAGCACAAGGTCAAGCCTGA...GTTTTGAAGGACTAAGCTCTCTTCTTCATTGACTAAAAGAGGATTCTTGTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CCA 90 bp | GAGCTCATTCGAGGGCAAGAACAGAGCTTCTATTTTCATTGTAATTCTCTACAAATCTTGGTAACTGCATaGGCTTTTTATTTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELIRGQEQSFYFHCNSLQILVTA*AFYLLL Trigger: CAAAAGCAAATAAAAAGCCCATGCAGTTACCAAGAT...TTGTAGAGAATTACAATGAAAATAGAAGCTCTGTTCTTGCCCTCGAATGAGCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR CCA 90 bp | GGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTCTTAAGTGTTGGGTACTCTaGCATTTTTCTAATATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGQNFILIVTLCTRLILKCWVL*HFSNIF Trigger: GAAGATATTAGAAAAATGCCAGAGTACCCAACACTT...AAGAATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| 3UTR CAA 72 bp | ACTGTGGAGTGCTTTAAAAGGTGCATTTCACTGGTGTaGCTAAATCAGTTCATGAAGTATAAAACTATACAC | + |
|
Preference number: 4 (lower is better) Translates to: TVECFKRCISLV*LNQFMKYKTIH Trigger: GTGTATAGTTTTATACTTCATGAACTGATTTAGCAACACCAGTGAAATGCACCTTTTAAAGCACTCCACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR CAA 90 bp | GCAGAAGTGCTGGGTAGATCAGAGGCTTCATCAGGAAAGTCACAGAGGAAATCACGGGCCCGCCTGAGTTaGCACCGGAAGGCCCAATCC | + |
|
Preference number: 5 (lower is better) Translates to: AEVLGRSEASSGKSQRKSRARLS*HRKAQS Trigger: GGATTGGGCCTTCCGGTGCAAACTCAGGCGGGCCCG...TGATTTCCTCTGTGACTTTCCTGATGAAGCCTCTGATCTACCCAGCACTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS GCA 90 bp | CATCTTTTCCATCTTTCCGCCTCGCCTTGTAGACATGCCCGTAGGTaGCGCGTCCCACTTTGCACCCTTCGTACTCAAACAGATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HLFHLSASPCRHARR*RVPLCTLRTQTDPP Trigger: TGGAGGATCTGTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCACCTACGGGCATGTCTACAAGGCGAGGCGGAAAGATGGAAAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
||
| CDS-3UTR CAA 90 bp | ACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTGTGCCGCGTCCCACTTaGCACCCTTCGTACTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSQVSPKGLDSVKALETSVPRPT*HPSYSN Trigger: GTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCAC...AGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR CAA 90 bp | TACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCAACTGCTGCTGGTGCCGCGTCCCACTTaGCACCCTTCGTACTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YNHLVEYALSTRATQLLLVPRPT*HPSYSN Trigger: GTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCAC...CAGCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTTCTGAGGTGATTCTCTaGGTTGGATCCATGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NKAGAARSIRTQVFCPCTSEVIL*VGSMVR Trigger: CCTCACCATGGATCCAACCAAGAGAATCACCTCAGA...AGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CAA 90 bp | AACAAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTGCCCAGATGTCTATTTaGACTCTCCCCCTTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NKAGAARSIRTQVFCPCTAQMSI*TLPLSG Trigger: TCCTGAAAGGGGGAGAGTCAAAATAGACATCTGGGC...AGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095743.4 |
||
| CDS-3UTR CAA 90 bp | GGACCTTCATCTCACAGGGCATTTATAAGTCAGTCACAGGGCGCGCACAGCCCACTGTCAGGCTTGACCTaGTGCTTCTCCATGTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GPSSHRAFISQSQGAHSPLSGLT*CFSMYF Trigger: AAAATACATGGAGAAGCACAAGGTCAAGCCTGACAG...TGGGCTGTGCGCGCCCTGTGACTGACTTATAAATGCCCTGTGAGATGAAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CAA 90 bp | ATAAGCATCCTTATGCTGAAATCAGTGTGGTCCTGGCTGGCTACAGTATCACATGTGCCGCGTCCCACTTaGCACCCTTCGTACTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISILMLKSVWSWLATVSHVPRPT*HPSYSN Trigger: GTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCAC...ATGTGATACTGTAGCCAGCCAGGACCACACTGATTTCAGCATAAGGATGCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGAGGCTTCATCAGGAAAGTCACAGAGGAAATCATGCGGGGGAAGAGGGCGCTGTCAGGCTTGACCTaGTGCTTCTCCATGTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: IRGFIRKVTEEIMRGKRALSGLT*CFSMYF Trigger: AAAATACATGGAGAAGCACAAGGTCAAGCCTGACAG...CGCCCTCTTCCCCCGCATGATTTCCTCTGTGACTTTCCTGATGAAGCCTCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CAA 90 bp | ACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCTGAAATCAGTGTGGCGGGCCCGCCTGAGTTaGCACCGGAAGGCCCAATCC | + |
|
Preference number: 5 (lower is better) Translates to: TIQPLLLFISILMLKSVWRARLS*HRKAQS Trigger: GGATTGGGCCTTCCGGTGCAAACTCAGGCGGGCCCG...CCACACTGATTTCAGCATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CAA 90 bp | TCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCCTGCTGGAGTCCACCCATGTCAGCTATTTaGACTCTCCCCCTTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SVFILGVFVTQIPPCWSPPMSAI*TLPLSG Trigger: TCCTGAAAGGGGGAGAGTCAAAATAGCTGACATGGG...TGGACTCCAGCAGGGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
||
| CDS-3UTR CAA 90 bp | GCAGAAGTGCTGGGTAGATCAGAGGCTTCATCAGGAAAGTCACAGAGGAAATCATCTGAGGTGATTCTCTaGGTTGGATCCATGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AEVLGRSEASSGKSQRKSSEVIL*VGSMVR Trigger: CCTCACCATGGATCCAACCAAGAGAATCACCTCAGA...TGATTTCCTCTGTGACTTTCCTGATGAAGCCTCTGATCTACCCAGCACTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CAA 90 bp | AACAAGGCTGGTGCTGCTAGGAGCATCAGAACACAGGTGTTCTGCCCCTGCACTGATGAAAAGGATTGCTaGTTTTTATATCCTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NKAGAARSIRTQVFCPCTDEKDC*FLYPPD Trigger: GTCAGGAGGATATAAAAACAAGCAATCCTTTTCATC...AGTGCAGGGGCAGAACACCTGTGTTCTGATGCTCCTAGCAGCACCAGCCTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CAA 90 bp | TCAGTCTTCATTCTGGGGGTCTTTGTAACACAAATACCACCCTGCTGGAGTCCACCATTACTAGGATATTaGCTGGTTTCAGGTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVFILGVFVTQIPPCWSPPLLGY*LVSGPC Trigger: ACAGGGACCTGAAACCAGCAAATATCCTAGTAATGG...TGGACTCCAGCAGGGTGGTATTTGTGTTACAAAGACCCCCAGAATGAAGACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CAA 90 bp | ACTTCCCAGGTGAGTCCCAAAGGACTGGATTCCGTCAAAGCTCTTGAAACCTCTAGTCTTTCTGAAGTGTaGGGTACTCTGGCATTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSQVSPKGLDSVKALETSSLSEV*GTLAFF Trigger: GAAAAATGCCAGAGTACCCAACACTTCAGAAAGACT...AGAGGTTTCAAGAGCTTTGACGGAATCCAGTCCTTTGGGACTCACCTGGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
||
| CDS-3UTR CAA 90 bp | GGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTCTTTCCGGGGCTTCTTGTTaGGAGGCACCTGATTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTGQNFILIVTLCTRLILSGASC*EAPDSA Trigger: GGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCGGA...AAGAATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | CATTGTAATTCTCTACAACCACTTAGTAGAATATGCTCTGTCCACAAGGGCCACCCCCTGTACGCTGCTTaGGTAATTCAGGCGAGAACT | + |
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Preference number: 5 (lower is better) Translates to: HCNSLQPLSRICSVHKGHPLYAA*VIQART Trigger: AGTTCTCGCCTGAATTACCAAAGCAGCGTACAGGGG...GTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTGTAGAGAATTACAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | GGGTCTGCACTTTGCATGGTGTCAGTCTTCATTCTGGGGGTCTTTGTAACACAATCCTGTGCCTTCGATTaGCTTAAGTGCATATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: GSALCMVSVFILGVFVTQSCAFD*LKCIFL Trigger: AAGGAATATGCACTTAAGCAAATCGAAGGCACAGGA...TTGTGTTACAAAGACCCCCAGAATGAAGACTGACACCATGCAAAGTGCAGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
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| CDS-3UTR CAA 90 bp | ATAAGCATCCTTATGCTGAAATCAGTGTGGTCCTGGCTGGCTACAGTATCACATAGATGTCAATGGCCTTaGTGTAATGCCTGGCACCAA | + |
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Preference number: 5 (lower is better) Translates to: ISILMLKSVWSWLATVSHRCQWP*CNAWHQ Trigger: TTGGTGCCAGGCATTACACAAAGGCCATTGACATCT...ATGTGATACTGTAGCCAGCCAGGACCACACTGATTTCAGCATAAGGATGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044672.11 |
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| CDS-3UTR CAA 90 bp | GAAGCATGTCACATGTCAATGACTTCATTTTCGGCCCTGGTATGCATGCCACCAAGTCTTTCTGAAGTGTaGGGTACTCTGGCATTTTTC | + |
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Preference number: 5 (lower is better) Translates to: EACHMSMTSFSALVCMPPSLSEV*GTLAFF Trigger: GAAAAATGCCAGAGTACCCAACACTTCAGAAAGACT...TGGTGGCATGCATACCAGGGCCGAAAATGAAGTCATTGACATGTGACATGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | CCTGGTATGCATGCCACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGAGCAGGAGGAACACTTaGCTGTCAGGCTTGACCTTG | + |
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Preference number: 5 (lower is better) Translates to: PGMHATIQPLLLFISILMSRRNT*LSGLTL Trigger: CAAGGTCAAGCCTGACAGCAAAGTGTTCCTCCTGCT...CATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGTGGCATGCATACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | CTTCACAAGAATCCTCTTTTAGTCAATGAAGAAGAGAGCTTAGTCCTTCAAAACTCCGGGGCTTCTTGTTaGGAGGCACCTGATTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LHKNPLLVNEEESLVLQNSGASC*EAPDSA Trigger: GGCTGAATCAGGTGCCTCCAAACAAGAAGCCCCGGA...GTTTTGAAGGACTAAGCTCTCTTCTTCATTGACTAAAAGAGGATTCTTGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | CCTGGTATGCATGCCACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCCCCTGTACGCTGCTTaGGTAATTCAGGCGAGAACT | + |
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Preference number: 5 (lower is better) Translates to: PGMHATIQPLLLFISILMPLYAA*VIQART Trigger: AGTTCTCGCCTGAATTACCAAAGCAGCGTACAGGGG...CATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGTGGCATGCATACCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | AAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGTGTGCCGCGTCCCACTTaGCACCCTTCGTACTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: KRKHSVQYKRFLTALSLSVPRPT*HPSYSN Trigger: GTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCAC...ACTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| CDS-3UTR CAA 90 bp | AAGCATACTTATCCAAGTGGGTTGAGAAGTAAACAAAGGACCTTCATCTCACAGTGCTGTGGCTGGTTCTaGTCACCTTTCTCTTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: KHTYPSGLRSKQRTFISQCCGWF*SPFSSG Trigger: ACCAGAAGAGAAAGGTGACAAGAACCAGCCACAGCA...CTGTGAGATGAAGGTCCTTTGTTTACTTCTCAACCCACTTGGATAAGTATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | CAGGGCACAGGACAGAACTTTATATTGATAGTGACATTATGCACAAGGCTGATTTGCTGTGGCTGGTTCTaGTCACCTTTCTCTTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: QGTGQNFILIVTLCTRLICCGWF*SPFSSG Trigger: ACCAGAAGAGAAAGGTGACAAGAACCAGCCACAGCA...AATCAGCCTTGTGCATAATGTCACTATCAATATAAAGTTCTGTCCTGTGCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | CAAAAGAAAGCATTCAGTGCAATACAAAAGATTCTTGACAGCGTTAAGTCTCAGAGCAGGAGGAACACTTaGCTGTCAGGCTTGACCTTG | + |
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Preference number: 5 (lower is better) Translates to: QKKAFSAIQKILDSVKSQSRRNT*LSGLTL Trigger: CAAGGTCAAGCCTGACAGCAAAGTGTTCCTCCTGCT...CTGAGACTTAACGCTGTCAAGAATCTTTTGTATTGCACTGAATGCTTTCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | ACCATACAGCCTTTATTACTGTTTATAAGCATCCTTATGCTGAAATCAGTGTGGCGAACACATCTAATGTaGGCAGGGGGTCTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: TIQPLLLFISILMLKSVWRTHLM*AGGLPG Trigger: TCCAGGAAGACCCCCTGCCAACATTAGATGTGTTCG...CCACACTGATTTCAGCATAAGGATGCTTATAAACAGTAATAAAGGCTGTATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | ATGGAAATGCAAATATTCACCTCATCTACTTTACACTATCTGCCCATAGTTCTTCGAACACATCTAATGTaGGCAGGGGGTCTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: MEMQIFTSSTLHYLPIVLRTHLM*AGGLPG Trigger: TCCAGGAAGACCCCCTGCCAACATTAGATGTGTTCG...AAGAACTATGGGCAGATAGTGTAAAGTAGATGAGGTGAATATTTGCATTTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | ATGGAAATGCAAATATTCACCTCATCTACTTTACACTATCTGCCCATAGTTCTTCCATTACTAGGATATTaGCTGGTTTCAGGTCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: MEMQIFTSSTLHYLPIVLPLLGY*LVSGPC Trigger: ACAGGGACCTGAAACCAGCAAATATCCTAGTAATGG...AAGAACTATGGGCAGATAGTGTAAAGTAGATGAGGTGAATATTTGCATTTCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS-3UTR CAA 90 bp | TATTTTACTTGTATATGGACCCCAGAGTATCATAACCAGGTAGATAGGTTCACAGATGAAAAGGATTGCTaGTTTTTATATCCTCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: YFTCIWTPEYHNQVDRFTDEKDC*FLYPPD Trigger: GTCAGGAGGATATAAAAACAAGCAATCCTTTTCATC...TGTGAACCTATCTACCTGGTTATGATACTCTGGGGTCCATATACAAGTAAAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 |
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| CDS GCA 72 bp | CCTTGTAGACATGCCCGTAGGTGCCGCGTCCCACTTTaGACCCTTCGTACTCAAACAGATCCTCCACCCGCT | + |
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Preference number: 6 (lower is better) Translates to: PCRHARRCRVPL*TLRTQTDPPPA Trigger: AGCGGGTGGAGGATCTGTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCACCTACGGGCATGTCTACAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| CDS GCA 72 bp | CATCTTTCCGCCTCGCCTTGTAGACATGCCCGTAGGTaGCGCGTCCCACTTTGCACCCTTCGTACTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: HLSASPCRHARR*RVPLCTLRTQT Trigger: TGTTTGAGTACGAAGGGTGCAAAGTGGGACGCGGCACCTACGGGCATGTCTACAAGGCGAGGCGGAAAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 ENSMUST00000215000.2 |
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| CDS GCA 72 bp | AACCCATGTCAGCAGGTCCCTGTGGAGCACCCAGTTTaGGTGGAGGTAATGGATGCCATCGAGGATCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: NPCQQVPVEHPV*VEVMDAIEDLV Trigger: TACCAGATCCTCGATGGCATCCATTACCTCCACGCAAACTGGGTGCTCCACAGGGACCTGCTGACATGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214659.2 |
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| CDS GCA 72 bp | CTTCCTGTCGCTGTGAGAAAGGAACACCTTCTGCAATaGGATCACATTAGGGTGCTTCAGTTCTCTCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LPVAVRKEHLLQ*DHIRVLQFSQK Trigger: CTTTTGAGAGAACTGAAGCACCCTAATGTGATCGCATTGCAGAAGGTGTTCCTTTCTCACAGCGACAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
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| CDS GCA 72 bp | GAAAGGAACACCTTCTGCAATGCGATCACATTAGGGTaGTTCAGTTCTCTCAAAAGTGCAATCTCTCTACAA | + |
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Preference number: 6 (lower is better) Translates to: ERNTFCNAITLG*FSSLKSAISLQ Trigger: TTGTAGAGAGATTGCACTTTTGAGAGAACTGAAGCACCCTAATGTGATCGCATTGCAGAAGGTGTTCCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044672.11 ENSMUST00000095743.4 ENSMUST00000214659.2 |
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