Pregenerated sensors for CDK18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026437Ensembl transcript IDs: ENSMUST00000027697.12, ENSMUST00000112362.3, ENSMUST00000185601.2
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCTCATCCCTCAAGGTGCAGCAGGGTGGGCATGGTTCAGAAGATaGTCTGCCGCCGGCTCTTCCCTCGCCCTGGGTGCTGGAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: PLIPQGAAGWAWFRR*SAAGSSLALGAGRP Trigger: TGGCCTTCCAGCACCCAGGGCGAGGGAAGAGCCGGCGGCAGAGCATCTTCTGAACCATGCCCACCCTGCTGCACCTTGAGGGATGAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
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| 3UTR CCA 90 bp | ATGAGTCGGCAGGGCCAGGGCCCCCACATTCTCCTGCACTTCCATTaGGAAAGGGTCCCAAGGACCTCCGTGACCTCACTTCCCCTCGGG | + |
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Preference number: 1 (lower is better) Translates to: MSRQGQGPHILLHFH*ERVPRTSVTSLPLG Trigger: CCCGAGGGGAAGTGAGGTCACGGAGGTCCTTGGGACCCTTTCCCAATGGAAGTGCAGGAGAATGTGGGGGCCCTGGCCCTGCCGACTCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR CCA 90 bp | TGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGTGGGCATaGTTCAGAAGATGCTCTGCCGCCGGCTCTTCCCTCGCCCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: CSVWPLIPQGAAGWA*FRRCSAAGSSLALG Trigger: ACCCAGGGCGAGGGAAGAGCCGGCGGCAGAGCATCTTCTGAACCATGCCCACCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
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| 3UTR CCA 90 bp | CCAGTGCCAGGGTCAGGTAGACAGGGCTGGGAAAGTGGTGGGGTGTaGAGAGGAGGCTGCACCAGCCCTAAAGAGCCAAGGTTACCATGG | + |
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Preference number: 1 (lower is better) Translates to: PVPGSGRQGWESGGV*RGGCTSPKEPRLPW Trigger: CCATGGTAACCTTGGCTCTTTAGGGCTGGTGCAGCCTCCTCTCCACACCCCACCACTTTCCCAGCCCTGTCTACCTGACCCTGGCACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR CCA 90 bp | AGGAAGCAAATGCTACCAACAGGGCTGCCGAGTGGCCCTCCAGGCTaGCCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGC | + |
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Preference number: 1 (lower is better) Translates to: RKQMLPTGLPSGPPG*PQAFIVQPSDGHTG Trigger: GCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| 3UTR GCA 90 bp | GCTGTGTGGCAAGCAAGGGAAGGAAGCAAATGCTACCAACAGGGCTaGCGAGTGGCCCTCCAGGCTGGCCACAGGCATTCATTGTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: AVWQAREGSKCYQQG*RVALQAGHRHSLFS Trigger: GCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCCTTGCTTGCCACACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR CCA 90 bp | GAGTGCACTCTACCACCTGCCAGTTTAAGGCAACCCTTTCCAGACTaGGGGGACGGGCAGGGGCTGGCTGAGGCTGTAGGAGTACATCTT | + |
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Preference number: 1 (lower is better) Translates to: ECTLPPASLRQPFPD*GDGQGLAEAVGVHL Trigger: AAGATGTACTCCTACAGCCTCAGCCAGCCCCTGCCCGTCCCCCCAGTCTGGAAAGGGTTGCCTTAAACTGGCAGGTGGTAGAGTGCACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR CCA 90 bp | GGCACTGGGAGACAGCTGGATTCTCAGCACTCTAAGAGCTGTGGCTaGAGGCACAGCCAGGTACAAGGGAGGTGTTCTGTGAGCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: GTGRQLDSQHSKSCG*RHSQVQGRCSVSSR Trigger: CCTGCTGCTCACAGAACACCTCCCTTGTACCTGGCTGTGCCTCCAGCCACAGCTCTTAGAGTGCTGAGAATCCAGCTGTCTCCCAGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR GCA 90 bp | AAGGTGTACATCACTAAACCTGGCCCAGCCCTCTCTGTATCTCTGTaGCCCTCCCACCCCAAGGAGCCAAGGAGCCACGTGGTTTTGGCA | + |
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Preference number: 1 (lower is better) Translates to: KVYITKPGPALSVSL*PSHPKEPRSHVVLA Trigger: TGCCAAAACCACGTGGCTCCTTGGCTCCTTGGGGTGGGAGGGGCACAGAGATACAGAGAGGGCTGGGCCAGGTTTAGTGATGTACACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR GCA 90 bp | ATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTaGAGCAGGGTGGGCATGGTTCAGAAGATGCTCTGCCGCCGGCTC | + |
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Preference number: 1 (lower is better) Translates to: ILPEFMFRVASHPSR*SRVGMVQKMLCRRL Trigger: GAGCCGGCGGCAGAGCATCTTCTGAACCATGCCCACCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
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| 3UTR CCA 90 bp | GTGTGGAGAGGAGGCTGCACCAGCCCTAAAGAGCCAAGGTTACCATaGTACCAGTGTCAAGGTGACCTTGCCTATCTGGGTGCCAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: VWRGGCTSPKEPRLP*YQCQGDLAYLGASL Trigger: GAGGCTGGCACCCAGATAGGCAAGGTCACCTTGACACTGGTACCATGGTAACCTTGGCTCTTTAGGGCTGGTGCAGCCTCCTCTCCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR TCA 90 bp | GAGTGGCCCTCCAGGCTGGCCACAGGCATTCATTGTTCAGCCCTCTaGTGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGT | + |
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Preference number: 1 (lower is better) Translates to: EWPSRLATGIHCSAL*WPHRPHILPEFMFR Trigger: ACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| 3UTR CCA 90 bp | GAGCCAAGGAGCCACGTGGTTTTGGCAGCAAAGCAGAGTGATTCATaGAGACCAGAACCCACGCCCCTCCTCAGGATTCTCTCTGGGTTA | + |
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Preference number: 1 (lower is better) Translates to: EPRSHVVLAAKQSDS*RPEPTPLLRILSGL Trigger: TAACCCAGAGAGAATCCTGAGGAGGGGCGTGGGTTCTGGTCTCCATGAATCACTCTGCTTTGCTGCCAAAACCACGTGGCTCCTTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR TCA 90 bp | AGTGTCAAGGTGACCTTGCCTATCTGGGTGCCAGCCTCAGGACCCTaGGACAGGGTTGTCTTATCAGCCCTCAGGAATGATAACACTCAT | + |
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Preference number: 1 (lower is better) Translates to: SVKVTLPIWVPASGP*DRVVLSALRNDNTH Trigger: ATGAGTGTTATCATTCCTGAGGGCTGATAAGACAACCCTGTCTCAGGGTCCTGAGGCTGGCACCCAGATAGGCAAGGTCACCTTGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR TCA 90 bp | ATGAGAGGAGTACAGAGGAAGGGTGCCTTCTCTAGGGATGTAGGATaGGGCTCTCAGGATCAAACCTGCTGCAATCTCACCTCTCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: MRGVQRKGAFSRDVG*GSQDQTCCNLTSLQ Trigger: CTGGAGAGAGGTGAGATTGCAGCAGGTTTGATCCTGAGAGCCTCATCCTACATCCCTAGAGAAGGCACCCTTCCTCTGTACTCCTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR CCA 90 bp | AGGATTCTCTCTGGGTTATCCTCATTGGTCACCACAGACACACCCTaGTCCAAGGGCAGGACACAGATGCCCAGGCATTTTCTGTTTTAC | + |
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Preference number: 1 (lower is better) Translates to: RILSGLSSLVTTDTP*SKGRTQMPRHFLFY Trigger: GTAAAACAGAAAATGCCTGGGCATCTGTGTCCTGCCCTTGGACCAGGGTGTGTCTGTGGTGACCAATGAGGATAACCCAGAGAGAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR TCA 90 bp | TCCAAGGGCAGGACACAGATGCCCAGGCATTTTCTGTTTTACCCATaGCCCTGGGTACCCTTTACCAGAGTTGATATGACCTCAGGTATA | + |
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Preference number: 1 (lower is better) Translates to: SKGRTQMPRHFLFYP*PWVPFTRVDMTSGI Trigger: TATACCTGAGGTCATATCAACTCTGGTAAAGGGTACCCAGGGTCATGGGTAAAACAGAAAATGCCTGGGCATCTGTGTCCTGCCCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR CCA 90 bp | CTCATCCCTCAAGGTGCAGCAGGGTGGGCATGGTTCAGAAGATGCTCTGCCGCCGCTCTTCCCTCGCCCTaGGTGCTGGAAGGCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LIPQGAAGWAWFRRCSAAALPSP*VLEGQA Trigger: GGCCTGGCCTTCCAGCACCCAGGGCGAGGGAAGAGC...GGCGGCAGAGCATCTTCTGAACCATGCCCACCCTGCTGCACCTTGAGGGATGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
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| 3UTR CAA 90 bp | GATGAGTCGGCAGGGCCAGGGCCCCCACATTCTCCTGCACTTCCATaGGGAAAGGGTCCCAAGGACCTCCGTGACCTCACTTCCCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: DESAGPGPPHSPALP*GKGPKDLRDLTSPR Trigger: CCGAGGGGAAGTGAGGTCACGGAGGTCCTTGGGACCCTTTCCCAATGGAAGTGCAGGAGAATGTGGGGGCCCTGGCCCTGCCGACTCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR CAA 90 bp | TCTCTGTGCCCCTCCCACCCCAAGGAGCCAAGGAGCCACGTGGTTTaGGCAGCAAAGCAGAGTGATTCATGGAGACCAGAACCCACGCCC | + |
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Preference number: 2 (lower is better) Translates to: SLCPSHPKEPRSHVV*AAKQSDSWRPEPTP Trigger: GGGCGTGGGTTCTGGTCTCCATGAATCACTCTGCTTTGCTGCCAAAACCACGTGGCTCCTTGGCTCCTTGGGGTGGGAGGGGCACAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR GCA 90 bp | GGCCAAGGACCAAGCCCTGGCTCACTCCAGCTTCCACTGCTTTGTCGAGGAAGCCTCTCTGTATCTCTGTaGCCCTCCCACCCCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GQGPSPGSLQLPLLCRGSLSVSL*PSHPKE Trigger: CTCCTTGGGGTGGGAGGGGCACAGAGATACAGAGAG...GCTTCCTCGACAAAGCAGTGGAAGCTGGAGTGAGCCAGGGCTTGGTCCTTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR CAA 90 bp | ATGAGGCCAAGGACCAAGCCCTGGCTCACTCCAGCTTCCACTGCTTaGTCGAGGAAGCAGGAGCGCCCTCAAGTACCAGGGTCACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: MRPRTKPWLTPASTA*SRKQERPQVPGSQN Trigger: GTTCTGTGACCCTGGTACTTGAGGGCGCTCCTGCTTCCTCGACAAAGCAGTGGAAGCTGGAGTGAGCCAGGGCTTGGTCCTTGGCCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCCAGCCATGGCCACCTCAATACCAACTTACAACTTATCCCCACCCTTGCCCTTGCCTATCTGGGTaGCAGCCTCAGGACCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LCQPWPPQYQLTTYPHPCPCLSG*QPQDPE Trigger: CTCAGGGTCCTGAGGCTGGCACCCAGATAGGCAAGG...GCAAGGGTGGGGATAAGTTGTAAGTTGGTATTGAGGTGGCCATGGCTGGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR CCA 90 bp | GGTTATCCTCATTGGTCACCACAGACACACCCTGGTCCAAGGGCAGGACACAGATTCCCACCCTTTCTGTaGAGGCCAGTGCCAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GYPHWSPQTHPGPRAGHRFPPFL*RPVPGS Trigger: TGACCCTGGCACTGGCCTCCACAGAAAGGGTGGGAA...TCTGTGTCCTGCCCTTGGACCAGGGTGTGTCTGTGGTGACCAATGAGGATAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCAGAGTGATTCATGGAGACCAGAACCCACGCCCCTCCTCAGGATTCTCTCATTGTTCAGCCCTCTaGTGGCCACACAGGCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: QSRVIHGDQNPRPSSGFSHCSAL*WPHRPH Trigger: ATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATG...AGAGAATCCTGAGGAGGGGCGTGGGTTCTGGTCTCCATGAATCACTCTGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR CCA 90 bp | GGTTATCCTCATTGGTCACCACAGACACACCCTGGTCCAAGGGCAGGACACAGAAGTGGCCCTCCAGGCTaGCCACAGGCATTCATTGTT | + |
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Preference number: 2 (lower is better) Translates to: GYPHWSPQTHPGPRAGHRSGPPG*PQAFIV Trigger: AACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACT...TCTGTGTCCTGCCCTTGGACCAGGGTGTGTCTGTGGTGACCAATGAGGATAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGATTCATGGAGACCAGAACCCACGCCCCTCCTCAGGATTCTCTCTGGGTCTCCTGCACTTCCATTaGGAAAGGGTCCCAAGGACC | + |
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Preference number: 2 (lower is better) Translates to: RVIHGDQNPRPSSGFSLGLLHFH*ERVPRT Trigger: GGTCCTTGGGACCCTTTCCCAATGGAAGTGCAGGAG...ACCCAGAGAGAATCCTGAGGAGGGGCGTGGGTTCTGGTCTCCATGAATCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR CCA 90 bp | TACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGCAGGCCACGATAGCCTaGGTCCTTTTGGAGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: YFLSSCSVWPLIPQGAAGQATIA*VLLELD Trigger: ATCCAGCTCCAAAAGGACCCAGGCTATCGTGGCCTG...CCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTACAAGGGAGGTGTTCTGTGAGCAGCAGGAGGTGATCGAGAACCAGTTAGCATGGTGGGGGAGGTaGCAAGAGGAGGTACTACTT | + |
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Preference number: 2 (lower is better) Translates to: PGTREVFCEQQEVIENQLAWWGR*QEEVLL Trigger: AAGTAGTACCTCCTCTTGTCACCTCCCCCACCATGC...TAACTGGTTCTCGATCACCTCCTGCTGCTCACAGAACACCTCCCTTGTACCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR GCA 90 bp | GGTTATCCTCATTGGTCACCACAGACACACCCTGGTCCAAGGGCAGGACACAGATGTTCCAGGAATGTCTaGCTTTGGGTGGGGTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GYPHWSPQTHPGPRAGHRCSRNV*LWVGSA Trigger: TGCTGACCCCACCCAAAGGCAGACATTCCTGGAACA...TCTGTGTCCTGCCCTTGGACCAGGGTGTGTCTGTGGTGACCAATGAGGATAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCCAGCCATGGCCACCTCAATACCAACTTACAACTTATCCCCACCCTTGCCACCACAGAGCTGTGTaGCAAGCAAGGGAAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LCQPWPPQYQLTTYPHPCHHRAV*QAREGS Trigger: GCTTCCTTCCCTTGCTTGCCACACAGCTCTGTGGTG...GCAAGGGTGGGGATAAGTTGTAAGTTGGTATTGAGGTGGCCATGGCTGGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCACTCTAAGAGCTGTGGCTGGAGGCACAGCCAGGTACAAGGGAGGTGTTGACATTCACAGTCAGTaGGAAAGGGGGTTAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LSTLRAVAGGTARYKGGVDIHSQ*ERGLGR Trigger: TCTCCCTAACCCCCTTTCCCACTGACTGTGAATGTC...AACACCTCCCTTGTACCTGGCTGTGCCTCCAGCCACAGCTCTTAGAGTGCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCAGAGTGATTCATGGAGACCAGAACCCACGCCCCTCCTCAGGATTCTCTAGGGAAGGAAGCAAATaGTACCAACAGGGCTGCCGA | + |
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Preference number: 2 (lower is better) Translates to: QSRVIHGDQNPRPSSGFSREGSK*YQQGCR Trigger: TCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCCT...AGAGAATCCTGAGGAGGGGCGTGGGTTCTGGTCTCCATGAATCACTCTGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTACAAGGGAGGTGTTCTGTGAGCAGCAGGAGGTGATCGAGAACCAGTTAGTGCACTCTACCACCTaGCAGTTTAAGGCAACCCTT | + |
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Preference number: 2 (lower is better) Translates to: PGTREVFCEQQEVIENQLVHSTT*QFKATL Trigger: AAGGGTTGCCTTAAACTGGCAGGTGGTAGAGTGCAC...TAACTGGTTCTCGATCACCTCCTGCTGCTCACAGAACACCTCCCTTGTACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCAGAGTGATTCATGGAGACCAGAACCCACGCCCCTCCTCAGGATTCTCTCCTCCCCTTGGTCTTTaGCCTTCAAGTTCAGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: QSRVIHGDQNPRPSSGFSPPLGL*PSSSAK Trigger: TTTGGCTGAACTTGAAGGGCAAAGACCAAGGGGAGG...AGAGAATCCTGAGGAGGGGCGTGGGTTCTGGTCTCCATGAATCACTCTGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR CCA 90 bp | CTGAGATTAAAGGTGTACATCACTAAACCTGGCCCAGCCCTCTCTGTATCTCTGCGCCCCATCCCACAGTaGGTGACAAGGGGAATGGTA | + |
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Preference number: 2 (lower is better) Translates to: LRLKVYITKPGPALSVSLRPIPQ*VTRGMV Trigger: TACCATTCCCCTTGTCACCCACTGTGGGATGGGGCG...CAGAGATACAGAGAGGGCTGGGCCAGGTTTAGTGATGTACACCTTTAATCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGAGTCCTCTGTCTCTGGCATTGTCCTATCAGTCTCCTTTTCTGAATGAGCAGAACACTTCCGGATaGAGCTGGACATGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: TQSPLSLALSYQSPFLNEQNTSG*SWTWAA Trigger: TGCTGCCCATGTCCAGCTGCATCCGGAAGTGTTCTG...CTCATTCAGAAAAGGAGACTGATAGGACAATGCCAGAGACAGAGGACTCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGTTCAGCCAAATGTTGGAGAGACCCTACACCATGAGAGGAGTACAGAGGGGATGCAGCTGGACATaGGCAGCATGCTGGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: FKFSQMLERPYTMRGVQRGCSWT*AACWCF Trigger: AAAGCACCAGCATGCTGCCCATGTCCAGCTGCATCC...CCTCTGTACTCCTCTCATGGTGTAGGGTCTCTCCAACATTTGGCTGAACTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR CCA 90 bp | CTGAGATTAAAGGTGTACATCACTAAACCTGGCCCAGCCCTCTCTGTATCTCTGAGAGTCCTCTGTCTCTaGCATTGTCCTATCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LRLKVYITKPGPALSVSLRVLCL*HCPISL Trigger: GAGACTGATAGGACAATGCCAGAGACAGAGGACTCT...CAGAGATACAGAGAGGGCTGGGCCAGGTTTAGTGATGTACACCTTTAATCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR-3UTR GCA 90 bp | CTGAGATTAAAGGTGTACATCACTAAACCTGGCCCAGCCCTCTCTGTATCTCTGTATATTCTCTGTCTTTaGTCTGAGTCACGACATTCA | + |
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Preference number: 2 (lower is better) Translates to: LRLKVYITKPGPALSVSLYILCL*SESRHS Trigger: TGAATGTCGTGACTCAGAGCAAAGACAGAGAATATA...CAGAGATACAGAGAGGGCTGGGCCAGGTTTAGTGATGTACACCTTTAATCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR GCA 72 bp | CCTCAAGGTGCAGCAGGGTGGGCATGGTTCAGAAGATaGTCTGCCGCCGGCTCTTCCCTCGCCCTGGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: PQGAAGWAWFRR*SAAGSSLALGA Trigger: AGCACCCAGGGCGAGGGAAGAGCCGGCGGCAGAGCATCTTCTGAACCATGCCCACCCTGCTGCACCTTGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
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| 3UTR CCA 72 bp | GGGTCAGGTAGACAGGGCTGGGAAAGTGGTGGGGTGTaGAGAGGAGGCTGCACCAGCCCTAAAGAGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: GSGRQGWESGGV*RGGCTSPKEPR Trigger: CCTTGGCTCTTTAGGGCTGGTGCAGCCTCCTCTCCACACCCCACCACTTTCCCAGCCCTGTCTACCTGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR CCA 72 bp | TGGCCTCTCATCCCTCAAGGTGCAGCAGGGTGGGCATaGTTCAGAAGATGCTCTGCCGCCGGCTCTTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: WPLIPQGAAGWA*FRRCSAAGSSL Trigger: GAGGGAAGAGCCGGCGGCAGAGCATCTTCTGAACCATGCCCACCCTGCTGCACCTTGAGGGATGAGAGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
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| 3UTR CCA 72 bp | CAGGGCCAGGGCCCCCACATTCTCCTGCACTTCCATTaGGAAAGGGTCCCAAGGACCTCCGTGACCTCACTT | + |
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Preference number: 3 (lower is better) Translates to: QGQGPHILLHFH*ERVPRTSVTSL Trigger: AAGTGAGGTCACGGAGGTCCTTGGGACCCTTTCCCAATGGAAGTGCAGGAGAATGTGGGGGCCCTGGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR GCA 72 bp | CACAGAGCTGTGTGGCAAGCAAGGGAAGGAAGCAAATaGTACCAACAGGGCTGCCGAGTGGCCCTCCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: HRAVWQAREGSK*YQQGCRVALQA Trigger: AGCCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCCTTGCTTGCCACACAGCTCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR GCA 72 bp | TGCTGCAATCTCACCTCTCTCCAGCTTAGGCTGCAGTaGGGACTCCCTTCCCACCCTTTCTGTGGAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: CCNLTSLQLRLQ*GLPSHPFCGGQ Trigger: CTGGCCTCCACAGAAAGGGTGGGAAGGGAGTCCGCACTGCAGCCTAAGCTGGAGAGAGGTGAGATTGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| 3UTR TCA 72 bp | GCCAAGGAGCCACGTGGTTTTGGCAGCAAAGCAGAGTaGTTCATGGAGACCAGAACCCACGCCCCTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AKEPRGFGSKAE*FMETRTHAPPQ Trigger: CTGAGGAGGGGCGTGGGTTCTGGTCTCCATGAATCACTCTGCTTTGCTGCCAAAACCACGTGGCTCCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR GCA 72 bp | GAGGGCAGAGGGGAGGCACTTAGTGTCCAGGCTGCATaGAGTCATCTTCTCATTGGATCCCAGCCTGTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: EGRGEALSVQAA*SHLLIGSQPVR Trigger: ACGCACAGGCTGGGATCCAATGAGAAGATGACTGCATGCAGCCTGGACACTAAGTGCCTCCCCTCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | GGGAAGGAAGCAAATGCTACCAACAGGGCTGCCGAGTaGCCCTCCAGGCTGGCCACAGGCATTCATTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GKEANATNRAAE*PSRLATGIHCS Trigger: TGAACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| 3UTR CCA 72 bp | TTTAGCCTTGGGTCAAGCCAGAGGGTACAGGGCTTCTaGCAAGGAGGGGACAATAGCATGGTGGGGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FSLGSSQRVQGF*QGGDNSMVGEV Trigger: CACCTCCCCCACCATGCTATTGTCCCCTCCTTGCCAGAAGCCCTGTACCCTCTGGCTTGACCCAAGGCTAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | CGCCCCTCCTCAGGATTCTCTCTGGGTTATCCTCATTaGTCACCACAGACACACCCTGGTCCAAGGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RPSSGFSLGYPH*SPQTHPGPRAG Trigger: TCCTGCCCTTGGACCAGGGTGTGTCTGTGGTGACCAATGAGGATAACCCAGAGAGAATCCTGAGGAGGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGCAGAGTGATTCATGGAGACCAGAACCCACGCCCCTCCTCAGGATTCTCTCAGGAATGTCTGCCTTaGGGTGGGGTCAGCACACCC | + |
|
Preference number: 3 (lower is better) Translates to: QSRVIHGDQNPRPSSGFSQECLP*GGVSTP Trigger: GGGTGTGCTGACCCCACCCAAAGGCAGACATTCCTG...AGAGAATCCTGAGGAGGGGCGTGGGTTCTGGTCTCCATGAATCACTCTGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR TCA 72 bp | GAGGGCTTGGCAGTCTGTGTGGTCTCGGAACAAATGTaGGCAGGGCACTGGGAGACAGCTGGATTCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: EGLAVCVVSEQM*AGHWETAGFSA Trigger: TGCTGAGAATCCAGCTGTCTCCCAGTGCCCTGCTCACATTTGTTCCGAGACCACACAGACTGCCAAGCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR GCA 72 bp | ACTTCCGGATGCAGCTGGACATGGGCAGCATGCTGGTaGTTTTTAGCCTTGGGTCAAGCCAGAGGGTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSGCSWTWAACW*FLALGQARGYR Trigger: CCTGTACCCTCTGGCTTGACCCAAGGCTAAAAAGCACCAGCATGCTGCCCATGTCCAGCTGCATCCGGAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR GCA 72 bp | CAGAACACTTCCGGATGCAGCTGGACATGGGCAGCATaGTGGTGCTTTTTAGCCTTGGGTCAAGCCAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QNTSGCSWTWAA*WCFLALGQARG Trigger: CCCTCTGGCTTGACCCAAGGCTAAAAAGCACCAGCATGCTGCCCATGTCCAGCTGCATCCGGAAGTGTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR GCA 72 bp | AAACCTGCTGCAATCTCACCTCTCTCCAGCTTAGGCTaGAGTGCGGACTCCCTTCCCACCCTTTCTGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KPAAISPLSSLG*SADSLPTLSVE Trigger: CTCCACAGAAAGGGTGGGAAGGGAGTCCGCACTGCAGCCTAAGCTGGAGAGAGGTGAGATTGCAGCAGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR GCA 72 bp | CCACAGACACACCCTGGTCCAAGGGCAGGACACAGATaGCCAGGCATTTTCTGTTTTACCCATGACCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQTHPGPRAGHR*PGIFCFTHDPG Trigger: CCCAGGGTCATGGGTAAAACAGAAAATGCCTGGGCATCTGTGTCCTGCCCTTGGACCAGGGTGTGTCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR GCA 72 bp | GAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTaGAGCAGGGTGGGCATGGTTCAGAAGATGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EFMFRVASHPSR*SRVGMVQKMLC Trigger: GCAGAGCATCTTCTGAACCATGCCCACCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
||
| 3UTR CCA 72 bp | GAGACCAGAACCCACGCCCCTCCTCAGGATTCTCTCTaGGTTATCCTCATTGGTCACCACAGACACACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ETRTHAPPQDSL*VILIGHHRHTL Trigger: CAGGGTGTGTCTGTGGTGACCAATGAGGATAACCCAGAGAGAATCCTGAGGAGGGGCGTGGGTTCTGGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | CCTCCCACCCCAAGGAGCCAAGGAGCCACGTGGTTTTaGCAGCAAAGCAGAGTGATTCATGGAGACCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PPTPRSQGATWF*QQSRVIHGDQN Trigger: GTTCTGGTCTCCATGAATCACTCTGCTTTGCTGCCAAAACCACGTGGCTCCTTGGCTCCTTGGGGTGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | CTCGGAACAAATGTGAGCAGGGCACTGGGAGACAGCTaGATTCTCAGCACTCTAAGAGCTGTGGCTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGTNVSRALGDS*ILSTLRAVAGG Trigger: GCCTCCAGCCACAGCTCTTAGAGTGCTGAGAATCCAGCTGTCTCCCAGTGCCCTGCTCACATTTGTTCCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | CGGGGAGAAAGAGGTTGTGGTGGAGATTTGATGCGATaGGTACAGACCTTGCAGGTAGGCAGAGGGCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RGERGCGGDLMR*VQTLQVGRGQG Trigger: CCCTTGCCCTCTGCCTACCTGCAAGGTCTGTACCCATCGCATCAAATCTCCACCACAACCTCTTTCTCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR TCA 72 bp | AGCCCTCTGATGGCCACACAGGCCCCATATACTTCCTaGGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPLMATQAPYTS*VHVPCGLSSLK Trigger: CTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 ENSMUST00000185601.2 |
||
| 3UTR TCA 72 bp | TCCAGGCTGGCCACAGGCATTCATTGTTCAGCCCTCTaGTGGCCACACAGGCCCCATATACTTCCTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SRLATGIHCSAL*WPHRPHILPEF Trigger: GAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| 3UTR TCA 72 bp | GTGACCTTGCCTATCTGGGTGCCAGCCTCAGGACCCTaGGACAGGGTTGTCTTATCAGCCCTCAGGAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: VTLPIWVPASGP*DRVVLSALRND Trigger: ATCATTCCTGAGGGCTGATAAGACAACCCTGTCTCAGGGTCCTGAGGCTGGCACCCAGATAGGCAAGGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR TCA 72 bp | CAGGGTCACAGAACAGGTAAGTCCAGGAGGCATGCCTaGGGGCTTGGCAGTCTGTGTGGTCTCGGAACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QGHRTGKSRRHA*GLGSLCGLGTN Trigger: ATTTGTTCCGAGACCACACAGACTGCCAAGCCCTCAGGCATGCCTCCTGGACTTACCTGTTCTGTGACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | AACACTTCCGGATGCAGCTGGACATGGGCAGCATGCTaGTGCTTTTTAGCCTTGGGTCAAGCCAGAGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: NTSGCSWTWAAC*CFLALGQARGY Trigger: GTACCCTCTGGCTTGACCCAAGGCTAAAAAGCACCAGCATGCTGCCCATGTCCAGCTGCATCCGGAAGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | TCTGTCTTTGCTCTGAGTCACGACATTCACAGTCAGTaGGAAAGGGGGTTAGGGAGAACCCAGGCTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SVFALSHDIHSQ*ERGLGRTQAPR Trigger: CCTGGGAGCCTGGGTTCTCCCTAACCCCCTTTCCCACTGACTGTGAATGTCGTGACTCAGAGCAAAGACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | AGCCACGTGGTTTTGGCAGCAAAGCAGAGTGATTCATaGAGACCAGAACCCACGCCCCTCCTCAGGATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SHVVLAAKQSDS*RPEPTPLLRIL Trigger: GAGAATCCTGAGGAGGGGCGTGGGTTCTGGTCTCCATGAATCACTCTGCTTTGCTGCCAAAACCACGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | AGACAGCTGGATTCTCAGCACTCTAAGAGCTGTGGCTaGAGGCACAGCCAGGTACAAGGGAGGTGTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RQLDSQHSKSCG*RHSQVQGRCSV Trigger: CACAGAACACCTCCCTTGTACCTGGCTGTGCCTCCAGCCACAGCTCTTAGAGTGCTGAGAATCCAGCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | GAATGGTATCCGGGTAGAGGCCACCACAGAGCTGTGTaGCAAGCAAGGGAAGGAAGCAAATGCTACCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: EWYPGRGHHRAV*QAREGSKCYQQ Trigger: CTGTTGGTAGCATTTGCTTCCTTCCCTTGCTTGCCACACAGCTCTGTGGTGGCCTCTACCCGGATACCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGCCAAATGTTGGAGAGACCCTACACCATGAGAGGAGTACAGAGGAAGGGTAGTGTCAAGGTGACCTaGCCTATCTGGGTGCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FSQMLERPYTMRGVQRKGSVKVT*PIWVPA Trigger: GGCTGGCACCCAGATAGGCAAGGTCACCTTGACACT...ACCCTTCCTCTGTACTCCTCTCATGGTGTAGGGTCTCTCCAACATTTGGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | TTGGAGTACCAGAACACTTCCGGATGCAGCTGGACATaGGCAGCATGCTGGTGCTTTTTAGCCTTGGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LEYQNTSGCSWT*AACWCFLALGQ Trigger: TTGACCCAAGGCTAAAAAGCACCAGCATGCTGCCCATGTCCAGCTGCATCCGGAAGTGTTCTGGTACTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAAGAGGTTGTGGTGGAGATTTGATGCGATGGGTACAGACCTTGCAGGTATCTCCTGCACTTCCATaGGGAAAGGGTCCCAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GERGCGGDLMRWVQTLQVSPALP*GKGPKD Trigger: GTCCTTGGGACCCTTTCCCAATGGAAGTGCAGGAGA...TACCTGCAAGGTCTGTACCCATCGCATCAAATCTCCACCACAACCTCTTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR TCA 72 bp | TCAAGTTCAGCCAAATGTTGGAGAGACCCTACACCATaGGAGGAGTACAGAGGAAGGGTGCCTTCTCTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSAKCWRDPTP*EEYRGRVPSLG Trigger: CCCTAGAGAAGGCACCCTTCCTCTGTACTCCTCTCATGGTGTAGGGTCTCTCCAACATTTGGCTGAACTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR TCA 72 bp | GTTTTACCCATGACCCTGGGTACCCTTTACCAGAGTTaGTATGACCTCAGGTATAGCATGGAGGGTACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VLPMTLGTLYQS*YDLRYSMEGTR Trigger: CCTGGTACCCTCCATGCTATACCTGAGGTCATATCAACTCTGGTAAAGGGTACCCAGGGTCATGGGTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR TCA 72 bp | AGGTGCCATATTCCTCGTTCTCAGAGGGGAAGAAGATaGAGTCAGGGTCCAAGGAATAAGAAGGGGGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RCHIPRSQRGRR*SQGPRNKKGVC Trigger: ACAAACCCCCTTCTTATTCCTTGGACCCTGACTTCATCTTCTTCCCCTCTGAGAACGAGGAATATGGCACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR TCA 72 bp | AGGACACAGATGCCCAGGCATTTTCTGTTTTACCCATaGCCCTGGGTACCCTTTACCAGAGTTGATATGACC | + |
|
Preference number: 3 (lower is better) Translates to: RTQMPRHFLFYP*PWVPFTRVDMT Trigger: GGTCATATCAACTCTGGTAAAGGGTACCCAGGGTCATGGGTAAAACAGAAAATGCCTGGGCATCTGTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | TGTTTATACATGAGATCGGGGAGAAAGAGGTTGTGGTaGAGATTTGATGCGATGGGTACAGACCTTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CLYMRSGRKRLW*RFDAMGTDLAG Trigger: ACCTGCAAGGTCTGTACCCATCGCATCAAATCTCCACCACAACCTCTTTCTCCCCGATCTCATGTATAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CCA 72 bp | CAGTGTTTATACATGAGATCGGGGAGAAAGAGGTTGTaGTGGAGATTTGATGCGATGGGTACAGACCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QCLYMRSGRKRL*WRFDAMGTDLA Trigger: TGCAAGGTCTGTACCCATCGCATCAAATCTCCACCACAACCTCTTTCTCCCCGATCTCATGTATAAACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGAAGCAAATGCTACCAACAGGGCTGCCGAGTGGCCCTCCAGGCTGGCCGCTCTTCCCTCGCCCTaGGTGCTGGAAGGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKEANATNRAAEWPSRLAALPSP*VLEGQA Trigger: GGCCTGGCCTTCCAGCACCCAGGGCGAGGGAAGAGC...GGCCAGCCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGAAAGGGTCCCAAGGACCTCCGTGACCTCACTTCCCCTCGGGAAGTGACCACCTGGGGGCGTGGCTaGGCAGTGGCTGTGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGKGPKDLRDLTSPREVTTWGRG*AVAVVG Trigger: ACCTACCACAGCCACTGCTCAGCCACGCCCCCAGGT...GGTCACTTCCCGAGGGGAAGTGAGGTCACGGAGGTCCTTGGGACCCTTTCCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR TCA 90 bp | GCCCTCCAGGCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGACCTGGGGGCGTGGCTaGGCAGTGGCTGTGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALQAGHRHSLFSPLMATQTWGRG*AVAVVG Trigger: ACCTACCACAGCCACTGCTCAGCCACGCCCCCAGGT...CTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR TCA 90 bp | GATGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCGGCGGGACATGCGGGTaGGAGGCTTGGGCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGHTGPIYFLSSCSVWPLGGTCG*EAWAAL Trigger: CAGGGCTGCCCAAGCCTCTCACCCGCATGTCCCGCC...GAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR TCA 90 bp | CACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAGGCGGGACATGCGGGTaGGAGGCTTGGGCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRPHILPEFMFRVASHPSGGTCG*EAWAAL Trigger: CAGGGCTGCCCAAGCCTCTCACCCGCATGTCCCGCC...TGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGAAGCAAATGCTACCAACAGGGCTGCCGAGTGGCCCTCCAGGCTGGCCAGGGACCGATCTGTGTaGATGAGGTCATGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKEANATNRAAEWPSRLARDRSV*MRSCRV Trigger: GACCCTGCATGACCTCATTCACACAGATCGGTCCCT...GGCCAGCCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGGCATGGTTCAGAAGATGCTCTGCCGCCGGCTCTTCCCTCGCCCTGGGCTGACATGCGACTCTTaGATTCATACTGGGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGMVQKMLCRRLFPRPGLTCDS*IHTGGV Trigger: CACGCCCCCAGTATGAATCCAAGAGTCGCATGTCAG...CCCAGGGCGAGGGAAGAGCCGGCGGCAGAGCATCTTCTGAACCATGCCCACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
||
| 3UTR CAA 72 bp | TGCCGAGTGGCCCTCCAGGCTGGCCACAGGCATTCATaGTTCAGCCCTCTGATGGCCACACAGGCCCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: CRVALQAGHRHS*FSPLMATQAPY Trigger: ATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACTCGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| 3UTR CAA 72 bp | AGGACCAAGCCCTGGCTCACTCCAGCTTCCACTGCTTaGTCGAGGAAGCAGGAGCGCCCTCAAGTACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTKPWLTPASTA*SRKQERPQVPG Trigger: CCCTGGTACTTGAGGGCGCTCCTGCTTCCTCGACAAAGCAGTGGAAGCTGGAGTGAGCCAGGGCTTGGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATCTCCTCAATGGTCTCTaGGCGGGGCACGGACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGHRHSLFSPLMATQAPYLLNGL*AGHGQG Trigger: TCCCTGTCCGTGCCCCGCCCAGAGACCATTGAGGAG...ATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CCA 90 bp | TGCCGAGTGGCCCTCCAGGCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGAGAGGGGCTTGCCGGTaGCCATCTCATAGAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CRVALQAGHRHSLFSPLMRGACR*PSHRGC Trigger: GCATCCTCTATGAGATGGCCACCGGCAAGCCCCTCT...CATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACTCGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGAAGCAAATGCTACCAACAGGGCTGCCGAGTGGCCCTCCAGGCTGGCCGGGTCCTTTTGGAGCTaGATCTCCTTCAGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKEANATNRAAEWPSRLAGSFWS*ISFREK Trigger: CTTCTCCCTGAAGGAGATCCAGCTCCAAAAGGACCC...GGCCAGCCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGAAAGGGTCCCAAGGACCTCCGTGACCTCACTTCCCCTCGGGAAGTGACCAGGGACCGATCTGTGTaGATGAGGTCATGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKGPKDLRDLTSPREVTRDRSV*MRSCRV Trigger: GACCCTGCATGACCTCATTCACACAGATCGGTCCCT...GGTCACTTCCCGAGGGGAAGTGAGGTCACGGAGGTCCTTGGGACCCTTTCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR TCA 90 bp | TGCCGAGTGGCCCTCCAGGCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGGGCTGCTCAGGAGGTTaGTGCCTTCAGTATCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: CRVALQAGHRHSLFSPLMGCSGG*CLQYPT Trigger: GGTTGGATACTGAAGGCATCAACCTCCTGAGCAGCC...CATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACTCGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGGGAAGGAAGCAAATGCTACCAACAGGGCTGCCGAGTGGCCCTCCAGGGGAAGTAGGGGTGATTaGGGGCTGCCTCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KQGKEANATNRAAEWPSRGSRGD*GLPLLT Trigger: TGTCAGCAGAGGCAGCCCTCAATCACCCCTACTTCC...CCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCCTTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CCA 90 bp | TACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGCTCCTCAATGGTCTCTaGGCGGGGCACGGACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YFLSSCSVWPLIPQGAAGLLNGL*AGHGQG Trigger: TCCCTGTCCGTGCCCCGCCCAGAGACCATTGAGGAG...CCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGGACCAAGCCCTGGCTCACTCCAGCTTCCACTGCTTTGTCGAGGAAGCGGGTGGAGTACTCTGTaGATCCCAGCAGCACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQGPSPGSLQLPLLCRGSGWSTL*IPAAHL Trigger: CAGATGTGCTGCTGGGATCCACAGAGTACTCCACCC...GCTTCCTCGACAAAGCAGTGGAAGCTGGAGTGAGCCAGGGCTTGGTCCTTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR CCA 90 bp | GGTTATCCTCATTGGTCACCACAGACACACCCTGGTCCAAGGGCAGGACACAGATCCAACCTGGGGGCGTaGCTGAGCAGTGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GYPHWSPQTHPGPRAGHRSNLGA*LSSGCG Trigger: ACCACAGCCACTGCTCAGCCACGCCCCCAGGTTGGA...TCTGTGTCCTGCCCTTGGACCAGGGTGTGTCTGTGGTGACCAATGAGGATAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR CCA 90 bp | TACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGTCCAACCTGGGGGCGTaGCTGAGCAGTGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YFLSSCSVWPLIPQGAAGSNLGA*LSSGCG Trigger: ACCACAGCCACTGCTCAGCCACGCCCCCAGGTTGGA...CCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGAAAGGGTCCCAAGGACCTCCGTGACCTCACTTCCCCTCGGGAAGTGACCGAGAGAGCCTCTTGTTaGGGTCCTCCATGGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LGKGPKDLRDLTSPREVTERASC*GPPWRI Trigger: GATTCTCCATGGAGGACCTCAACAAGAGGCTCTCTC...GGTCACTTCCCGAGGGGAAGTGAGGTCACGGAGGTCCTTGGGACCCTTTCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR TCA 90 bp | TTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGTGGGCTTGCTGCGTCCCTTaGAGACGGTGGCATAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSSCSVWPLIPQGAAGWACCVP*RRWHRY Trigger: GTACCTATGCCACCGTCTTCAAGGGACGCAGCAAGC...CCACCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR TCA 90 bp | CAGGATCCCCTTAGCCCCAGCCCAGGGCCGGTGCAGAGATGTGCAGAGACCAGACATTGTGCATGTTCATaGGGTTCCCACAGTGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QDPLSPSPGPVQRCAETRHCACS*GSHSGL Trigger: TAGACCACTGTGGGAACCTCATGAACATGCACAATG...TCTGGTCTCTGCACATCTCTGCACCGGCCCTGGGCTGGGGCTAAGGGGATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGGGAAGGAAGCAAATGCTACCAACAGGGCTGCCGAGTGGCCCTCCAGGATGCCAGGAGACAGCTaGTCAGGCTCATCTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQGKEANATNRAAEWPSRMPGDS*SGSSVP Trigger: TGGCACAGATGAGCCTGAGCAGCTGTCTCCTGGCAT...CCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCCTTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR GCA 90 bp | AGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGCCCGGTGCAGGATCTTaGGGTGGTGGCAGTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPHILPEFMFRVASHPSRPGAGS*GGGSRP Trigger: TGGCCTACTGCCACCACCGCAAGATCCTGCACCGGG...CCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR GCA 90 bp | CCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATACTTCCCCGGTGCAGGATCTTaGGGTGGTGGCAGTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQAFIVQPSDGHTGPIYFPGAGS*GGGSRP Trigger: TGGCCTACTGCCACCACCGCAAGATCCTGCACCGGG...GAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR GCA 90 bp | GGTCTCGGAACAAATGTGAGCAGGGCACTGGGAGACAGCTGGATTCTCAGCACTCCGGGAAGAGGGGCTTaGCGGTGGCCATCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLGTNVSRALGDSWILSTPGRGA*RWPSHR Trigger: TCTATGAGATGGCCACCGGCAAGCCCCTCTTCCCGG...AGTGCTGAGAATCCAGCTGTCTCCCAGTGCCCTGCTCACATTTGTTCCGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR GCA 90 bp | CCCTCTGATGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCGGGAAGAGGGGCTTaGCGGTGGCCATCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSDGHTGPIYFLSSCSVWPGRGA*RWPSHR Trigger: TCTATGAGATGGCCACCGGCAAGCCCCTCTTCCCGG...CCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CCA 90 bp | TTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATACTTCCTGAGTTCAGCTCTTCCCTCGCCCTaGGTGCTGGAAGGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIVQPSDGHTGPIYFLSSALPSP*VLEGQA Trigger: GGCCTGGCCTTCCAGCACCCAGGGCGAGGGAAGAGC...TGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR TCA 90 bp | CCTCCAGGCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCATCCTCATTCGTCTaGGTGTGGAGTTGGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPGWPQAFIVQPSDGHTGPSSFV*VWSWLN Trigger: GTTCAACCAACTCCACACTCAGACGAATGAGGATGG...GCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CCA 90 bp | TGCCGAGTGGCCCTCCAGGCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGACATGTCAATGGGGGTaGAGTACTCTGTGGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRVALQAGHRHSLFSPLMTCQWG*STLWIP Trigger: TGGGATCCACAGAGTACTCCACCCCCATTGACATGT...CATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACTCGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CCA 90 bp | CCCTCTGATGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCGCCCCACATGTCAATaGGGGTGGAGTACTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSDGHTGPIYFLSSCSVWRPTCQ*GWSTLW Trigger: CCACAGAGTACTCCACCCCCATTGACATGTGGGGCG...CCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| 3UTR CAA 72 bp | CCCTCCCACCCCAAGGAGCCAAGGAGCCACGTGGTTTaGGCAGCAAAGCAGAGTGATTCATGGAGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSHPKEPRSHVV*AAKQSDSWRPE Trigger: TTCTGGTCTCCATGAATCACTCTGCTTTGCTGCCAAAACCACGTGGCTCCTTGGCTCCTTGGGGTGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| CDS-3UTR TCA 90 bp | CCAGGTACAAGGGAGGTGTTCTGTGAGCAGCAGGAGGTGATCGAGAACCAGTTAGGAAGTAGGGGTGATTaGGGGCTGCCTCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGTREVFCEQQEVIENQLGSRGD*GLPLLT Trigger: TGTCAGCAGAGGCAGCCCTCAATCACCCCTACTTCC...TAACTGGTTCTCGATCACCTCCTGCTGCTCACAGAACACCTCCCTTGTACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| CDS-3UTR TCA 90 bp | CACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAGGAAGTAGGGGTGATTaGGGGCTGCCTCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HRPHILPEFMFRVASHPSGSRGD*GLPLLT Trigger: TGTCAGCAGAGGCAGCCCTCAATCACCCCTACTTCC...TGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 ENSMUST00000185601.2 |
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| CDS-3UTR CCA 90 bp | GGTTATCCTCATTGGTCACCACAGACACACCCTGGTCCAAGGGCAGGACACAGAGTAGGCGGATGTCCATaGGCAGAGAGAGCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GYPHWSPQTHPGPRAGHRVGGCP*AERASC Trigger: ACAAGAGGCTCTCTCTGCCCATGGACATCCGCCTAC...TCTGTGTCCTGCCCTTGGACCAGGGTGTGTCTGTGGTGACCAATGAGGATAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR CCA 90 bp | GATGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCGTAGGCGGATGTCCATaGGCAGAGAGAGCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DGHTGPIYFLSSCSVWPLVGGCP*AERASC Trigger: ACAAGAGGCTCTCTCTGCCCATGGACATCCGCCTAC...GAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CCA 90 bp | CCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCCGCCCCACATGTCAATaGGGGTGGAGTACTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHILPEFMFRVASHPSRCRPTCQ*GWSTLW Trigger: CCACAGAGTACTCCACCCCCATTGACATGTGGGGCG...GCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CCA 90 bp | CACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATACTTCCAGAGGGGCTTGCCGGTaGCCATCTCATAGAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HRHSLFSPLMATQAPYTSRGACR*PSHRGC Trigger: GCATCCTCTATGAGATGGCCACCGGCAAGCCCCTCT...GGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR TCA 90 bp | CATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCGCTTGCTGCGTCCCTTaGAGACGGTGGCATAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HILPEFMFRVASHPSRCSACCVP*RRWHRY Trigger: GTACCTATGCCACCGTCTTCAAGGGACGCAGCAAGC...GCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR TCA 90 bp | GCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATACCGATCTGTGTGAATaGGGTCATGCAGGGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: AGHRHSLFSPLMATQAPYTDLCE*GHAGSQ Trigger: TTGTGACCCTGCATGACCTCATTCACACAGATCGGT...ATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR TCA 90 bp | CAAAGCAGAGTGATTCATGGAGACCAGAACCCACGCCCCTCCTCAGGATTCTCTGGCTGCTCAGGAGGTTaGTGCCTTCAGTATCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: QSRVIHGDQNPRPSSGFSGCSGG*CLQYPT Trigger: GGTTGGATACTGAAGGCATCAACCTCCTGAGCAGCC...AGAGAATCCTGAGGAGGGGCGTGGGTTCTGGTCTCCATGAATCACTCTGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| CDS-3UTR GCA 90 bp | AGAGTGATTCATGGAGACCAGAACCCACGCCCCTCCTCAGGATTCTCTCTGGGTTCCAGCTGTAGCTTCTaGAGGAATTCCTGGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVIHGDQNPRPSSGFSLGSSCSF*RNSWGR Trigger: CCTACCCCAGGAATTCCTGCAGAAGCTACAGCTGGA...ACCCAGAGAGAATCCTGAGGAGGGGCGTGGGTTCTGGTCTCCATGAATCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| CDS-3UTR GCA 90 bp | GGCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATAAGACGGAAGATGAGGTaGAACTCCTCCTTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GWPQAFIVQPSDGHTGPIRRKMR*NSSLTV Trigger: TACTGTCAAGGAGGAGTTGCACCTCATCTTCCGTCT...TATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CCA 90 bp | CTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGTGCTGACATGCGACTCTTaGATTCATACAGGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPEFMFRVASHPSRCSRVLTCDS*IHTGGG Trigger: GCCTCCTCCTGTATGAATCCAAGAGTCGCATGTCAG...CACCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CCA 90 bp | GCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATCTGACATGCGACTCTTaGATTCATACAGGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGHRHSLFSPLMATQAPYLTCDS*IHTGGG Trigger: GCCTCCTCCTGTATGAATCCAAGAGTCGCATGTCAG...ATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CCA 90 bp | ACCCTGGTCCAAGGGCAGGACACAGATGCCCAGGCATTTTCTGTTTTACCCATGCAGGCCACGATAGCCTaGGTCCTTTTGGAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLVQGQDTDAQAFSVLPMQATIA*VLLELD Trigger: ATCCAGCTCCAAAAGGACCCAGGCTATCGTGGCCTG...CATGGGTAAAACAGAAAATGCCTGGGCATCTGTGTCCTGCCCTTGGACCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| CDS-3UTR TCA 90 bp | TGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATACTCAAACACCAGGGTaGGGGACCGATCTGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WPHRPHILPEFMFRVASHTQTPG*GTDLCE Trigger: TTCACACAGATCGGTCCCTCACCCTGGTGTTTGAGT...ATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR GCA 90 bp | CTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGTGTGGAGTTGGTTGAACTaGTCAGTGAACTCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPEFMFRVASHPSRCSRVWSWLN*SVNSAN Trigger: GTTGGCTGAGTTCACTGAGCAGTTCAACCAACTCCA...CACCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR GCA 90 bp | CCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCTCCAGCTGTAGCTTCTaGAGGAATTCCTGGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHILPEFMFRVASHPSRCSSCSF*RNSWGR Trigger: CCTACCCCAGGAATTCCTGCAGAAGCTACAGCTGGA...GCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR GCA 90 bp | CTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGTGCTGCCTCTGCTGACATaGGACTCTTGGATTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: LPEFMFRVASHPSRCSRVLPLLT*DSWIHT Trigger: TGTATGAATCCAAGAGTCGCATGTCAGCAGAGGCAG...CACCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CCA 90 bp | CTGTGCCAGCCATGGCCACCTCAATACCAACTTACAACTTATCCCCACCCTTGCCCTTCAGGGAGAAGATaGAGGCAGTGTCATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCQPWPPQYQLTTYPHPCPSGRR*RQCHGA Trigger: AGCTCCATGACACTGCCTCCATCTTCTCCCTGAAGG...GCAAGGGTGGGGATAAGTTGTAAGTTGGTATTGAGGTGGCCATGGCTGGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| CDS-3UTR TCA 90 bp | TTGATGAGGAAATGCTATGAGGCCAAGGACCAAGCCCTGGCTCACTCCAGCTTCCCATCCTCATTCGTCTaGGTGTGGAGTTGGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LMRKCYEAKDQALAHSSFPSSFV*VWSWLN Trigger: GTTCAACCAACTCCACACTCAGACGAATGAGGATGG...GAAGCTGGAGTGAGCCAGGGCTTGGTCCTTGGCCTCATAGCATTTCCTCATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR TCA 90 bp | CACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATACTTCCACCGATCTGTGTGAATaGGGTCATGCAGGGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: HRHSLFSPLMATQAPYTSTDLCE*GHAGSQ Trigger: TTGTGACCCTGCATGACCTCATTCACACAGATCGGT...GGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR GCA 90 bp | GCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATACTTCCTGAGTGCTCAGGCTCATCTGTaGCATCCTCATTCGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFIVQPSDGHTGPIYFLSAQAHL*HPHSSE Trigger: CTCAGACGAATGAGGATGGCACAGATGAGCCTGAGC...ACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CCA 90 bp | ATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGTGGAGTACTCTGTaGATCCCAGCAGCACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IYFLSSCSVWPLIPQGAAGWSTL*IPAAHL Trigger: CAGATGTGCTGCTGGGATCCACAGAGTACTCCACCC...TGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CCA 90 bp | CCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCACATGTCAATGGGGGTaGAGTACTCTGTGGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHILPEFMFRVASHPSRCTCQWG*STLWIP Trigger: TGGGATCCACAGAGTACTCCACCCCCATTGACATGT...GCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CCA 90 bp | GCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATACTTCCTGAGTCCTTCAGGGAGAAGATaGAGGCAGTGTCATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFIVQPSDGHTGPIYFLSPSGRR*RQCHGA Trigger: AGCTCCATGACACTGCCTCCATCTTCTCCCTGAAGG...ACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR TCA 90 bp | GATGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCGGGAAAGCCTTCGCTTaGAGTTCTTCATCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGHTGPIYFLSSCSVWPLGKAFA*SSSSCS Trigger: TGAACAAGATGAAGAACTTCAAGCGAAGGCTTTCCC...GAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR TCA 90 bp | GACACAGATGCCCAGGCATTTTCTGTTTTACCCATGACCCTGGGTACCCTTTACACTCAAACACCAGGGTaGGGGACCGATCTGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DTDAQAFSVLPMTLGTLYTQTPG*GTDLCE Trigger: TTCACACAGATCGGTCCCTCACCCTGGTGTTTGAGT...GTAAAGGGTACCCAGGGTCATGGGTAAAACAGAAAATGCCTGGGCATCTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR TCA 90 bp | CACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATACTTCCCATTGTGCATGTTCATaGGGTTCCCACAGTGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HRHSLFSPLMATQAPYTSHCACS*GSHSGL Trigger: TAGACCACTGTGGGAACCTCATGAACATGCACAATG...GGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR GCA 90 bp | TTGATGAGGAAATGCTATGAGGCCAAGGACCAAGCCCTGGCTCACTCCAGCTTCTGGAGTTGGTTGAACTaGTCAGTGAACTCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LMRKCYEAKDQALAHSSFWSWLN*SVNSAN Trigger: GTTGGCTGAGTTCACTGAGCAGTTCAACCAACTCCA...GAAGCTGGAGTGAGCCAGGGCTTGGTCCTTGGCCTCATAGCATTTCCTCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR GCA 90 bp | GACCAAGCCCTGGCTCACTCCAGCTTCCACTGCTTTGTCGAGGAAGCAGGAGCGAATATCTTGACATTGTaGATGTTCATGAGGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DQALAHSSFHCFVEEAGANILTL*MFMRFP Trigger: TGGGAACCTCATGAACATGCACAATGTCAAGATATT...CGCTCCTGCTTCCTCGACAAAGCAGTGGAAGCTGGAGTGAGCCAGGGCTTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGGCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCAATATCTTGACATTGTaGATGTTCATGAGGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPGWPQAFIVQPSDGHTGNILTL*MFMRFP Trigger: TGGGAACCTCATGAACATGCACAATGTCAAGATATT...GCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCCCAGGTCAGGTGCCATATTCCTCGTTCTCAGAGGGGAAGAAGATGAACTGCCTCTGCTGACATaGGACTCTTGGATTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: QGPRSGAIFLVLRGEEDELPLLT*DSWIHT Trigger: TGTATGAATCCAAGAGTCGCATGTCAGCAGAGGCAG...TTCATCTTCTTCCCCTCTGAGAACGAGGAATATGGCACCTGACCTGGGACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR GCA 90 bp | CCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCCTGCCTCTGCTGACATaGGACTCTTGGATTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: PHILPEFMFRVASHPSRCLPLLT*DSWIHT Trigger: AGTATGAATCCAAGAGTCGCATGTCAGCAGAGGCAG...GCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
||
| CDS-3UTR CCA 90 bp | CACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGACCCCGGAGCAGCTaGAACATGAATATCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HRPHILPEFMFRVASHPSRPRSS*NMNILT Trigger: TGTCAAGATATTCATGTTCCAGCTGCTCCGGGGTCT...TGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| 3UTR CAA 72 bp | CTATCTGGGTGCCAGCCTCAGGACCCTGAGACAGGGTaGTCTTATCAGCCCTCAGGAATGATAACACTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LSGCQPQDPETG*SYQPSGMITLI Trigger: TATGAGTGTTATCATTCCTGAGGGCTGATAAGACAACCCTGTCTCAGGGTCCTGAGGCTGGCACCCAGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| 3UTR CAA 72 bp | TCCCCTTGGTCTTTGCCCTTCAAGTTCAGCCAAATGTaGGAGAGACCCTACACCATGAGAGGAGTACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPWSLPFKFSQM*ERPYTMRGVQR Trigger: CCTCTGTACTCCTCTCATGGTGTAGGGTCTCTCCAACATTTGGCTGAACTTGAAGGGCAAAGACCAAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR TCA 90 bp | TGTGCCAGCCATGGCCACCTCAATACCAACTTACAACTTATCCCCACCCTTGCCGGGAAAGCCTTCGCTTaGAGTTCTTCATCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CASHGHLNTNLQLIPTLAGKAFA*SSSSCS Trigger: TGAACAAGATGAAGAACTTCAAGCGAAGGCTTTCCC...GGCAAGGGTGGGGATAAGTTGTAAGTTGGTATTGAGGTGGCCATGGCTGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTTCAGCCAAATGTTGGAGAGACCCTACACCATGAGAGGAGTACAGAGGGCTCAGGCTCATCTGTaGCATCCTCATTCGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKFSQMLERPYTMRGVQRAQAHL*HPHSSE Trigger: CTCAGACGAATGAGGATGGCACAGATGAGCCTGAGC...CCTCTGTACTCCTCTCATGGTGTAGGGTCTCTCCAACATTTGGCTGAACTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR CCA 90 bp | TTGGTCTTTGCCCTTCAAGTTCAGCCAAATGTTGGAGAGACCCTACACCATGAGGGGTCCTTTTGGAGCTaGATCTCCTTCAGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVFALQVQPNVGETLHHEGSFWS*ISFREK Trigger: CTTCTCCCTGAAGGAGATCCAGCTCCAAAAGGACCC...CTCATGGTGTAGGGTCTCTCCAACATTTGGCTGAACTTGAAGGGCAAAGACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR GCA 90 bp | GGAGAAAGAGGTTGTGGTGGAGATTTGATGCGATGGGTACAGACCTTGCAGGTAAGACGGAAGATGAGGTaGAACTCCTCCTTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GERGCGGDLMRWVQTLQVRRKMR*NSSLTV Trigger: TACTGTCAAGGAGGAGTTGCACCTCATCTTCCGTCT...TACCTGCAAGGTCTGTACCCATCGCATCAAATCTCCACCACAACCTCTTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR CAA 90 bp | TGCCGAGTGGCCCTCCAGGCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGATGCGGGTGAGAGGCTaGGGCAGCCCTGGGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CRVALQAGHRHSLFSPLMMRVRG*GSPGFS Trigger: GGAGAACCCAGGGCTGCCCAAGCCTCTCACCCGCAT...CATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACTCGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CAA 90 bp | CCTCATTGGTCACCACAGACACACCCTGGTCCAAGGGCAGGACACAGATGCCCAATGCGGGTGAGAGGCTaGGGCAGCCCTGGGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHWSPQTHPGPRAGHRCPMRVRG*GSPGFS Trigger: GGAGAACCCAGGGCTGCCCAAGCCTCTCACCCGCAT...TGGGCATCTGTGTCCTGCCCTTGGACCAGGGTGTGTCTGTGGTGACCAATGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGAAGCAAATGCTACCAACAGGGCTGCCGAGTGGCCCTCCAGGCTGGCCCTGGTTCTGCCGTTGTaGATACTGCATGCCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GKEANATNRAAEWPSRLALVLPL*ILHARR Trigger: TCTCCTGGCATGCAGTATCAACAACGGCAGAACCAG...GGCCAGCCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CAA 90 bp | GCCCTCCAGGCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCGCTGGTTCTGCCGTaGTTGATACTGCATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALQAGHRHSLFSPLMATQALVLP*LILHAR Trigger: CCTGGCATGCAGTATCAACAACGGCAGAACCAGCGC...CTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS CCA 90 bp | TTGGGCAGCCCTGGGTTCTCCAGCTGTAGCTTCTGCAGGAATTCCTaGGGTAGGCGGATGTCCATGGGCAGAGAGAGCCTCTTGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGSPGFSSCSFCRNS*GRRMSMGRESLLLR Trigger: CCTCAACAAGAGGCTCTCTCTGCCCATGGACATCCGCCTACCCCAGGAATTCCTGCAGAAGCTACAGCTGGAGAACCCAGGGCTGCCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CAA 90 bp | GGCTGGCCACAGGCATTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATAGGCAGAGAGAGCCTCTaGTTGAGGTCCTCCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GWPQAFIVQPSDGHTGPIGRESL*LRSSME Trigger: CTCCATGGAGGACCTCAACAAGAGGCTCTCTCTGCC...TATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CAA 90 bp | GGCCAAGGACCAAGCCCTGGCTCACTCCAGCTTCCACTGCTTTGTCGAGGAAGCAGGTTCTCTGTCAGCTaGCTGCGTCCCTTGAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: GQGPSPGSLQLPLLCRGSRFSVS*LRPLKT Trigger: CGTCTTCAAGGGACGCAGCAAGCTGACAGAGAACCT...GCTTCCTCGACAAAGCAGTGGAAGCTGGAGTGAGCCAGGGCTTGGTCCTTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
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| CDS-3UTR CAA 90 bp | CTGGGTGCTGGAAGGCCAGGCCACGATAGCCTGGGTCCTTTTGGAGCTGGATCTGCTGACATGCGACTCTaGGATTCATACTGGGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LGAGRPGHDSLGPFGAGSADMRL*DSYWGR Trigger: ACGCCCCCAGTATGAATCCAAGAGTCGCATGTCAGC...AGATCCAGCTCCAAAAGGACCCAGGCTATCGTGGCCTGGCCTTCCAGCACCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
||
| CDS TCA 90 bp | GCCTCTGCTGACATGCGACTCTTGGATTCATACTGGGGGCGTGGCTaGGCAGTGGCTGTGGTAGGTATCGGGGGAAGTTGTAGGCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASADMRLLDSYWGRG*AVAVVGIGGSCRLE Trigger: TTCGAGCCTACAACTTCCCCCGATACCTACCACAGCCACTGCTCAGCCACGCCCCCAGTATGAATCCAAGAGTCGCATGTCAGCAGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
||
| CDS TCA 90 bp | GTCTCCGAGAGACTGGAAGTAGGGGTGATTGAGGGCTGCCTCTGCTaGCATGCGACTCTTGGATTCATACTGGGGGCGTGGCTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSERLEVGVIEGCLC*HATLGFILGAWLSS Trigger: ACTGCTCAGCCACGCCCCCAGTATGAATCCAAGAGTCGCATGTCAGCAGAGGCAGCCCTCAATCACCCCTACTTCCAGTCTCTCGGAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGTGAGGTGCAACTCCTCCTaGACAGTAGAGCCCGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPEFMFRVASHPSRCSRVRCNSS*TVEPGK Trigger: CTTCCCGGGCTCTACTGTCAAGGAGGAGTTGCACCT...CACCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS TCA 90 bp | GTCTCCGAGAGACTGGAAGTAGGGGTGATTGAGGGCTGCCTCTGCTaGCATGCGACTCTTGGATTCATACAGGAGGAGGCTGCTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSERLEVGVIEGCLC*HATLGFIQEEAAQE Trigger: CTCCTGAGCAGCCTCCTCCTGTATGAATCCAAGAGTCGCATGTCAGCAGAGGCAGCCCTCAATCACCCCTACTTCCAGTCTCTCGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CAA 90 bp | GGGAAGGAAGCAAATGCTACCAACAGGGCTGCCGAGTGGCCCTCCAGGCTGGCCAGGGAAAGCCTTCGCTaGAAGTTCTTCATCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GKEANATNRAAEWPSRLARESLR*KFFILF Trigger: GAACAAGATGAAGAACTTCAAGCGAAGGCTTTCCCT...GGCCAGCCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTGCTTCCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CAA 90 bp | CTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGTGAGGTTCTCTGTCAGCTaGCTGCGTCCCTTGAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: LPEFMFRVASHPSRCSRVRFSVS*LRPLKT Trigger: CGTCTTCAAGGGACGCAGCAAGCTGACAGAGAACCT...CACCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS TCA 90 bp | TTGTTGAGGTCCTCCATGGAGAATCGGCGCTGGTTCTGCCGTTGTTaGTACTGCATGCCAGGAGACAGCTGCTCAGGCTCATCTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLRSSMENRRWFCRC*YCMPGDSCSGSSVP Trigger: TGGCACAGATGAGCCTGAGCAGCTGTCTCCTGGCATGCAGTATCAACAACGGCAGAACCAGCGCCGATTCTCCATGGAGGACCTCAACAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CAA 90 bp | ATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGGCAGAGAGAGCCTCTaGTTGAGGTCCTCCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILPEFMFRVASHPSRCSRGRESL*LRSSME Trigger: CTCCATGGAGGACCTCAACAAGAGGCTCTCTCTGCC...CCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CAA 90 bp | TCTGATGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTAGGTGCAACTCCTCCTaGACAGTAGAGCCCGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SDGHTGPIYFLSSCSVWPRCNSS*TVEPGK Trigger: CTTCCCGGGCTCTACTGTCAAGGAGGAGTTGCACCT...AGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS CCA 90 bp | GTTGAACTGCTCAGTGAACTCAGCCAACGACTCCTCAATGGTCTCTaGGCGGGGCACGGACAGGGAAAGCCTTCGCTTGAAGTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VELLSELSQRLLNGL*AGHGQGKPSLEVLH Trigger: ATGAAGAACTTCAAGCGAAGGCTTTCCCTGTCCGTGCCCCGCCCAGAGACCATTGAGGAGTCGTTGGCTGAGTTCACTGAGCAGTTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CAA 90 bp | TACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGCAGGGAGGCTGCTCAGGAGGTaGATGCCTTCAGTATCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: YFLSSCSVWPLIPQGAAGRLLRR*MPSVSN Trigger: GTTGGATACTGAAGGCATCAACCTCCTGAGCAGCCT...CCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGATGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGGCTGACATGCGACTCTaGGATTCATACAGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSDGHTGPIYFLSSCSVWADMRL*DSYRRR Trigger: CCTCCTCCTGTATGAATCCAAGAGTCGCATGTCAGC...CCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CAA 90 bp | CAGCCCTCTGATGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGCAGGGTCACAATATaGGCGTGTTTCAGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QPSDGHTGPIYFLSSCSVCRVTI*ACFRSF Trigger: GAAGGACCTGAAACACGCCAATATTGTGACCCTGCA...CACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CAA 90 bp | CCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGTGCAGGCTGCTCAGGAGGTaGATGCCTTCAGTATCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PHILPEFMFRVASHPSRCRLLRR*MPSVSN Trigger: GTTGGATACTGAAGGCATCAACCTCCTGAGCAGCCT...GCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CAA 90 bp | TCTGATGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTGCTGACATGCGACTCTaGGATTCATACAGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SDGHTGPIYFLSSCSVWPADMRL*DSYRRR Trigger: CCTCCTCCTGTATGAATCCAAGAGTCGCATGTCAGC...AGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CAA 90 bp | GTAGGAGTACATCTTGGAGTACCAGAACACTTCCGGATGCAGCTGGACATGGGCTGCAGGGTCACAATATaGGCGTGTTTCAGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGVHLGVPEHFRMQLDMGCRVTI*ACFRSF Trigger: GAAGGACCTGAAACACGCCAATATTGTGACCCTGCA...GCCCATGTCCAGCTGCATCCGGAAGTGTTCTGGTACTCCAAGATGTACTCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS-3UTR CAA 90 bp | TTCATTGTTCAGCCCTCTGATGGCCACACAGGCCCCATATACTTCCTGAGTTCACTGGTTCTGCCGTTGTaGATACTGCATGCCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FIVQPSDGHTGPIYFLSSLVLPL*ILHARR Trigger: TCTCCTGGCATGCAGTATCAACAACGGCAGAACCAG...TGAACTCAGGAAGTATATGGGGCCTGTGTGGCCATCAGAGGGCTGAACAATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS-3UTR CAA 90 bp | CACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATCCCTCAAGGGAAAGCCTTCGCTaGAAGTTCTTCATCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HRPHILPEFMFRVASHPSRESLR*KFFILF Trigger: GAACAAGATGAAGAACTTCAAGCGAAGGCTTTCCCT...TGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CAA 90 bp | TGGCCACACAGGCCCCATATACTTCCTGAGTTCATGTTCCGTGTGGCCTCTCATTGGAACATGAATATCTaGACATTGTGCATGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: WPHRPHILPEFMFRVASHWNMNI*TLCMFM Trigger: CATGAACATGCACAATGTCAAGATATTCATGTTCCA...ATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS-3UTR CAA 90 bp | GACACCCAGAGTCCTCTGTCTCTGGCATTGTCCTATCAGTCTCCTTTTCTGAATTGGAACATGAATATCTaGACATTGTGCATGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: DTQSPLSLALSYQSPFLNWNMNI*TLCMFM Trigger: CATGAACATGCACAATGTCAAGATATTCATGTTCCA...ATTCAGAAAAGGAGACTGATAGGACAATGCCAGAGACAGAGGACTCTGGGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027697.12 |
||
| CDS GCA 72 bp | ACCTCTCGAATAGCAGTGCAGGGCGCCCCTTCCTCATaGTCCAGCCGGATCTCCTTCAGGGCCACGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSRIAVQGAPSS*SSRISFRATRF Trigger: GAACCTCGTGGCCCTGAAGGAGATCCGGCTGGAGCATGAGGAAGGGGCGCCCTGCACTGCTATTCGAGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS CCA 72 bp | CCTGGGTTCTCCAGCTGTAGCTTCTGCAGGAATTCCTaGGGTAGGCGGATGTCCATGGGCAGAGAGAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PGFSSCSFCRNS*GRRMSMGRESL Trigger: GAGGCTCTCTCTGCCCATGGACATCCGCCTACCCCAGGAATTCCTGCAGAAGCTACAGCTGGAGAACCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS CCA 72 bp | AGGAGGTTGATGCCTTCAGTATCCAACCTGGGGGCGTaGCTGAGCAGTGGCTGTGGTAGGTATCGGGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RRLMPSVSNLGA*LSSGCGRYRGK Trigger: CTTCCCCCGATACCTACCACAGCCACTGCTCAGCCACGCCCCCAGGTTGGATACTGAAGGCATCAACCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS CAA 90 bp | GACATGCGACTCTTGGATTCATACAGGAGGAGGCTGCTCAGGAGGTaGATGCCTTCAGTATCCAACCTGGGGGCGTGGCTGAGCAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DMRLLDSYRRRLLRR*MPSVSNLGAWLSSG Trigger: GCCACTGCTCAGCCACGCCCCCAGGTTGGATACTGAAGGCATCAACCTCCTGAGCAGCCTCCTCCTGTATGAATCCAAGAGTCGCATGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
||
| CDS CCA 72 bp | CTCAGTGAACTCAGCCAACGACTCCTCAATGGTCTCTaGGCGGGGCACGGACAGGGAAAGCCTTCGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LSELSQRLLNGL*AGHGQGKPSLE Trigger: TTCAAGCGAAGGCTTTCCCTGTCCGTGCCCCGCCCAGAGACCATTGAGGAGTCGTTGGCTGAGTTCACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS CAA 72 bp | GTCCTCCATGGAGAATCGGCGCTGGTTCTGCCGTTGTaGATACTGCATGCCAGGAGACAGCTGCTCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: VLHGESALVLPL*ILHARRQLLRL Trigger: GAGCCTGAGCAGCTGTCTCCTGGCATGCAGTATCAACAACGGCAGAACCAGCGCCGATTCTCCATGGAGGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS CAA 72 bp | GAGGTCCTCCATGGAGAATCGGCGCTGGTTCTGCCGTaGTTGATACTGCATGCCAGGAGACAGCTGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: EVLHGESALVLP*LILHARRQLLR Trigger: CCTGAGCAGCTGTCTCCTGGCATGCAGTATCAACAACGGCAGAACCAGCGCCGATTCTCCATGGAGGACCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS CAA 90 bp | CTTGTTGAGGTCCTCCATGGAGAATCGGCGCTGGTTCTGCCGTTGTaGATACTGCATGCCAGGAGACAGCTGCTCAGGCTCATCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LVEVLHGESALVLPL*ILHARRQLLRLICA Trigger: GGCACAGATGAGCCTGAGCAGCTGTCTCCTGGCATGCAGTATCAACAACGGCAGAACCAGCGCCGATTCTCCATGGAGGACCTCAACAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS TCA 72 bp | GACATGCGACTCTTGGATTCATACTGGGGGCGTGGCTaGGCAGTGGCTGTGGTAGGTATCGGGGGAAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: DMRLLDSYWGRG*AVAVVGIGGSC Trigger: ACAACTTCCCCCGATACCTACCACAGCCACTGCTCAGCCACGCCCCCAGTATGAATCCAAGAGTCGCATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
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| CDS TCA 72 bp | AGACTGGAAGTAGGGGTGATTGAGGGCTGCCTCTGCTaGCATGCGACTCTTGGATTCATACTGGGGGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: RLEVGVIEGCLC*HATLGFILGAW Trigger: CCACGCCCCCAGTATGAATCCAAGAGTCGCATGTCAGCAGAGGCAGCCCTCAATCACCCCTACTTCCAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185601.2 |
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| CDS CAA 72 bp | CTCTTGGATTCATACAGGAGGAGGCTGCTCAGGAGGTaGATGCCTTCAGTATCCAACCTGGGGGCGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLDSYRRRLLRR*MPSVSNLGAWL Trigger: CAGCCACGCCCCCAGGTTGGATACTGAAGGCATCAACCTCCTGAGCAGCCTCCTCCTGTATGAATCCAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS CAA 90 bp | CCTCTTGTTGAGGTCCTCCATGGAGAATCGGCGCTGGTTCTGCCGTaGTTGATACTGCATGCCAGGAGACAGCTGCTCAGGCTCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: PLVEVLHGESALVLP*LILHARRQLLRLIC Trigger: ACAGATGAGCCTGAGCAGCTGTCTCCTGGCATGCAGTATCAACAACGGCAGAACCAGCGCCGATTCTCCATGGAGGACCTCAACAAGAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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| CDS TCA 72 bp | AGACTGGAAGTAGGGGTGATTGAGGGCTGCCTCTGCTaGCATGCGACTCTTGGATTCATACAGGAGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RLEVGVIEGCLC*HATLGFIQEEA Trigger: AGCCTCCTCCTGTATGAATCCAAGAGTCGCATGTCAGCAGAGGCAGCCCTCAATCACCCCTACTTCCAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027697.12 ENSMUST00000112362.3 |
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