Pregenerated sensors for CDK17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020015Ensembl transcript IDs: ENSMUST00000069965.9, ENSMUST00000213378.2, ENSMUST00000214445.2, ENSMUST00000215286.2, ENSMUST00000216729.2
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGTGTCAGAGCCGCCTCCCGTCAGGAACACTGGCGAAGCCGCTaGCAGGAGCTTCAGAATTCTTGTCAGTTTAAGGGGCTTCTGAGA | + |
|
Preference number: 1 (lower is better) Translates to: HSVRAASRQEHWRSR*QELQNSCQFKGLLR Trigger: TCTCAGAAGCCCCTTAAACTGACAAGAATTCTGAAGCTCCTGTCAGCGGCTTCGCCAGTGTTCCTGACGGGAGGCGGCTCTGACACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216729.2 |
||
| 3UTR CCA 90 bp | TGCAGAACGCTCCAGAGGCCTTCAAGGCCATCAAGACGGAGAAGCTaGAGGAGCCCTGTGATGACAGTCCCCCTTCAGAATTCTTGTCAG | + |
|
Preference number: 1 (lower is better) Translates to: CRTLQRPSRPSRRRS*RSPVMTVPLQNSCQ Trigger: CTGACAAGAATTCTGAAGGGGGACTGTCATCACAGGGCTCCTCCAGCTTCTCCGTCTTGATGGCCTTGAAGGCCTCTGGAGCGTTCTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR GCA 90 bp | AACCCAAAATGTCTGCTACTCATTTGCTTGCATCAACCCTCACATTaGATGCTCCCGAAACACACTGTGCTGACCCCCTCTCAGCCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: NPKCLLLICLHQPSH*MLPKHTVLTPSQPG Trigger: GCCAGGCTGAGAGGGGGTCAGCACAGTGTGTTTCGGGAGCATGCAATGTGAGGGTTGATGCAAGCAAATGAGTAGCAGACATTTTGGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR CCA 90 bp | CATGTGTTATGTGGCGTGCACGCATGTGTGGGTATACGTGGTACATaGGTACACACTTGGCCATGTGTGTGTAGCCACAAGACTGGCATC | + |
|
Preference number: 1 (lower is better) Translates to: HVLCGVHACVGIRGT*VHTWPCVCSHKTGI Trigger: GATGCCAGTCTTGTGGCTACACACACATGGCCAAGTGTGTACCCATGTACCACGTATACCCACACATGCGTGCACGCCACATAACACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR TCA 90 bp | GCTGACCCCCTCTCAGCCTGGCTATTGGCCAATGCGCCTAAGAAATaGTATGTAGCACGGACTTCGAGTGTTCACGATGGCTCACTTATT | + |
|
Preference number: 1 (lower is better) Translates to: ADPLSAWLLANAPKK*YVARTSSVHDGSLI Trigger: AATAAGTGAGCCATCGTGAACACTCGAAGTCCGTGCTACATATCATTTCTTAGGCGCATTGGCCAATAGCCAGGCTGAGAGGGGGTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR TCA 90 bp | GCCGCTGACAGGAGCTTCAGAATTCTTGTCAGTTTAAGGGGCTTCTaGGAGTTCCAGGTTCAGTCTTTCCAAGTTTTAAGTCTCCTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: AADRSFRILVSLRGF*EFQVQSFQVLSLLS Trigger: AGAGAGGAGACTTAAAACTTGGAAAGACTGAACCTGGAACTCTCAGAAGCCCCTTAAACTGACAAGAATTCTGAAGCTCCTGTCAGCGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216729.2 |
||
| 3UTR GCA 90 bp | GTGAAGTCAATCTCCCTTGGCCCTTCTTGCTTAACCTTGGCCATGTaGGTCACTGCAGTACTCAAAGTTTATCTCCTACTTCTTAGAATT | + |
|
Preference number: 1 (lower is better) Translates to: VKSISLGPSCLTLAM*VTAVLKVYLLLLRI Trigger: AATTCTAAGAAGTAGGAGATAAACTTTGAGTACTGCAGTGACGCACATGGCCAAGGTTAAGCAAGAAGGGCCAAGGGAGATTGACTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR TCA 90 bp | GTGGCTCCATTTAAAGACACAGCACAGCTTTCAGCTCATTCCAAGTaGACGTTATTGAAACACACACAGTCCCCAAATGAAAGAAACGGT | + |
|
Preference number: 1 (lower is better) Translates to: VAPFKDTAQLSAHSK*TLLKHTQSPNERNG Trigger: ACCGTTTCTTTCATTTGGGGACTGTGTGTGTTTCAATAACGTTCACTTGGAATGAGCTGAAAGCTGTGCTGTGTCTTTAAATGGAGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR GCA 90 bp | GAAAACTCTTGCCTTCATAGCGATTTTCATGTTCCATTTATATCATaGTGCTGGAGGGATGAGGACTTAACTGAAGAGCCAGAAGAAGAC | + |
|
Preference number: 1 (lower is better) Translates to: ENSCLHSDFHVPFIS*CWRDEDLTEEPEED Trigger: GTCTTCTTCTGGCTCTTCAGTTAAGTCCTCATCCCTCCAGCAGCATGATATAAATGGAACATGAAAATCGCTATGAAGGCAAGAGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 90 bp | CTAAAGCAGTCCTCTGGGTTCTTCTTTCTCATTTCTAATTCATCGTaGCTCCATTTAAAGACACAGCACAGCTTTCAGCTCATTCCAAGT | + |
|
Preference number: 1 (lower is better) Translates to: LKQSSGFFFLISNSS*LHLKTQHSFQLIPS Trigger: ACTTGGAATGAGCTGAAAGCTGTGCTGTGTCTTTAAATGGAGCCACGATGAATTAGAAATGAGAAAGAAGAACCCAGAGGACTGCTTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR TCA 90 bp | TTAAAGACACAGCACAGCTTTCAGCTCATTCCAAGTGAACGTTATTaGAACACACACAGTCCCCAAATGAAAGAAACGGTCCCTCAAAAT | + |
|
Preference number: 1 (lower is better) Translates to: LKTQHSFQLIPSERY*NTHSPQMKETVPQN Trigger: ATTTTGAGGGACCGTTTCTTTCATTTGGGGACTGTGTGTGTTTCAATAACGTTCACTTGGAATGAGCTGAAAGCTGTGCTGTGTCTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR TCA 90 bp | AACAAACAAACAAACAACAACAAAATGCAGCAGTCAAACAATTTGTaGGGAGAAACAGATGCGTTCACATATAATAAAGCCACTGCAACT | + |
|
Preference number: 1 (lower is better) Translates to: NKQTNNNKMQQSNNL*GETDAFTYNKATAT Trigger: AGTTGCAGTGGCTTTATTATATGTGAACGCATCTGTTTCTCCTCACAAATTGTTTGACTGCTGCATTTTGTTGTTGTTTGTTTGTTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR CAA 90 bp | GACTGTAAGGTGTCCCCGGAAGGCCGAGAGGTCCACAGGCACGGCTaGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCG | + |
|
Preference number: 2 (lower is better) Translates to: DCKVSPEGREVHRHG*SSLKSASRNEYLHS Trigger: CGAGTGGAGGTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCCTGTGGACCTCTCGGCCTTCCGGGGACACCTTACAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215286.2 ENSMUST00000216729.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCTTTCCCGGATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGCCGGTCAAGACGGAGAAGCTaGAGGAGCCCTGTGATGACA | + |
|
Preference number: 2 (lower is better) Translates to: VSFPDILKMDPHAVEISRSRRRS*RSPVMT Trigger: TGTCATCACAGGGCTCCTCCAGCTTCTCCGTCTTGA...CCGGCTGATCTCTACCGCGTGAGGATCCATTTTCAGGATATCCGGGAAAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215286.2 ENSMUST00000216729.2 |
||
| 3UTR CAA 90 bp | GAACCCAAAATGTCTGCTACTCATTTGCTTGCATCAACCCTCACATaGCATGCTCCCGAAACACACTGTGCTGACCCCCTCTCAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EPKMSATHLLASTLT*HAPETHCADPLSAW Trigger: CCAGGCTGAGAGGGGGTCAGCACAGTGTGTTTCGGGAGCATGCAATGTGAGGGTTGATGCAAGCAAATGAGTAGCAGACATTTTGGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR CAA 90 bp | CCAGTGGCTTTCATGCCAGAAATGGCTGCCTGGCTGAAGCAAACCTaGGTTGCGTTGCTGGGTGGCGGTAACTTACATTTCCCAGATGTT | + |
|
Preference number: 2 (lower is better) Translates to: PVAFMPEMAAWLKQT*VALLGGGNLHFPDV Trigger: AACATCTGGGAAATGTAAGTTACCGCCACCCAGCAACGCAACCAAGGTTTGCTTCAGCCAGGCAGCCATTTCTGGCATGAAAGCCACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CAA 90 bp | ACAAGACTGGCATCAGATGTCTTCCTCACTCACTCTCCACTTTACTaGCTGAGACAGGAACCCTTGCTGAACCCAGAGCTCATGGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: TRLASDVFLTHSPLY*LRQEPLLNPELMDS Trigger: TGAATCCATGAGCTCTGGGTTCAGCAAGGGTTCCTGTCTCAGCAAGTAAAGTGGAGAGTGAGTGAGGAAGACATCTGATGCCAGTCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCACTTTCTCATGGGCTGAGAAAACTCTTGCCTTCATAGCGATTTTCATGTTCTCACCATCAACTCCCTaGAGAACGCTCCAGAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PTFSWAEKTLAFIAIFMFSPSTP*RTLQRP Trigger: AGGCCTCTGGAGCGTTCTGCAGGGAGTTGATGGTGA...GAACATGAAAATCGCTATGAAGGCAAGAGTTTTCTCAGCCCATGAGAAAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAATAAAAAGACTCCACTGGGAAGAGGACAGTGCTGACACACGGAGTTCCCAATCAGCTCTGAGTCCATaGCTGATAAGAAAGGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: EIKRLHWEEDSADTRSSQSALSP*LIRKAG Trigger: TCCAGCCTTTCTTATCAGCCATGGACTCAGAGCTGA...TTGGGAACTCCGTGTGTCAGCACTGTCCTCTTCCCAGTGGAGTCTTTTTATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR TCA 90 bp | ATAAATAATGCACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACAGGAAGAGGACAGTGCTaGCACACGGAGTTCCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: INNALCFSVRHKSAATVTGRGQC*HTEFPS Trigger: ACTTGGGAACTCCGTGTGTCAGCACTGTCCTCTTCC...TGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGTGCATTATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCTGATGAGCAGATAATACCCACAACACTAAAGCAGTCCTCTGGGTTCTTCTCTCAGCCTGGCTATTaGCCAATGCGCCTAAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: VSDEQIIPTTLKQSSGFFSQPGY*PMRLRN Trigger: ATTTCTTAGGCGCATTGGCCAATAGCCAGGCTGAGA...GAAGAACCCAGAGGACTGCTTTAGTGTTGTGGGTATTATCTGCTCATCAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCACTTTCTCATGGGCTGAGAAAACTCTTGCCTTCATAGCGATTTTCATGTTCACATGGGTACACACTTaGCCATGTGTGTGTAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PTFSWAEKTLAFIAIFMFTWVHT*PCVCSH Trigger: GTGGCTACACACACATGGCCAAGTGTGTACCCATGT...GAACATGAAAATCGCTATGAAGGCAAGAGTTTTCTCAGCCCATGAGAAAGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCTGTCTTCAATTCGATGTGCAGAAAGCCAGAACAAATGTGCCTCTCTCACAGAGTTTAAGGGGCTTCTaGGAGTTCCAGGTTCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: FCLQFDVQKARTNVPLSQSLRGF*EFQVQS Trigger: AGACTGAACCTGGAACTCTCAGAAGCCCCTTAAACT...CTGTGAGAGAGGCACATTTGTTCTGGCTTTCTGCACATCGAATTGAAGACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216729.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTCGTCTCTTTCCCGGATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGGTCTTCAATTCGATGTaGAGAAAGCCAGAACAAATG | + |
|
Preference number: 2 (lower is better) Translates to: VRLFPGYPENGSSRGRDQVFNSM*RKPEQM Trigger: CATTTGTTCTGGCTTTCTGCACATCGAATTGAAGAC...CTGATCTCTACCGCGTGAGGATCCATTTTCAGGATATCCGGGAAAGAGACGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216729.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGAATGGTCTAGCTAGCCATCCTAGATATCTAGCTTGTCCTAGACATCCAAGTTTAAGGGGCTTCTaGGAGTTCCAGGTTCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: IQNGLASHPRYLACPRHPSLRGF*EFQVQS Trigger: AGACTGAACCTGGAACTCTCAGAAGCCCCTTAAACT...TGGATGTCTAGGACAAGCTAGATATCTAGGATGGCTAGCTAGACCATTCTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTGTCCTTTCCCACATGTGTCATGGGGTCTACATTCAGATTTGAACATTCTGAAGCCAGAACAAATGTaGCTCTCTCACAGTGTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: HCPFPHVSWGLHSDLNILKPEQM*LSHSVR Trigger: TCTGACACTGTGAGAGAGGCACATTTGTTCTGGCTT...CAGAATGTTCAAATCTGAATGTAGACCCCATGACACATGTGGGAAAGGACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216729.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCAGTGGTCCAATATTCACCATTACATATGAATCTGTTTCTTCCAGAACTTCACACAGTCCCCAAATaGAAGAAACGGTCCCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AAVVQYSPLHMNLFLPELHTVPK*KKRSLK Trigger: TTTGAGGGACCGTTTCTTTCATTTGGGGACTGTGTG...AAGTTCTGGAAGAAACAGATTCATATGTAATGGTGAATATTGGACCACTGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGCTGACAACTGTGAAAGCAGCAGTGGTCCAATATTCACCATTACATATGAATAACTACAGGATTTCCTaGACAGAAATGAGAGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: QLTTVKAAVVQYSPLHMNNYRIS*TEMRGP Trigger: GGGTCCTCTCATTTCTGTTCAGGAAATCCTGTAGTT...ATTCATATGTAATGGTGAATATTGGACCACTGCTGCTTTCACAGTTGTCAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGCTGACAACTGTGAAAGCAGCAGTGGTCCAATATTCACCATTACATATGAATAAGGCCCTTCCTGTTTaGATGACTTATGTGGCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: QLTTVKAAVVQYSPLHMNKALPV*MTYVAK Trigger: TTTAGCCACATAAGTCATTCAAACAGGAAGGGCCTT...ATTCATATGTAATGGTGAATATTGGACCACTGCTGCTTTCACAGTTGTCAGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTAACCTTGGCCATGTGCGTCACTGCAGTACTCAAAGTTTATCTCCTACTTCTCTCAGTGGTAGCTTTTaGTATTACAAAATCGTCACA | + |
|
Preference number: 2 (lower is better) Translates to: LNLGHVRHCSTQSLSPTSLSGSF*YYKIVT Trigger: TGTGACGATTTTGTAATAGCAAAAGCTACCACTGAG...AGAAGTAGGAGATAAACTTTGAGTACTGCAGTGACGCACATGGCCAAGGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAAACAATAAACTACAGGATTTCCTGAACAGAAATGAGAGGACCCTGAATGTTATAGCTGTAACCTACTaGCTCTACTGGCGGAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: TNNKLQDFLNRNERTLNVIAVTY*LYWRRR Trigger: TCTTCTCCGCCAGTAGAGCCAGTAGGTTACAGCTAT...AACATTCAGGGTCCTCTCATTTCTGTTCAGGAAATCCTGTAGTTTATTGTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAGCAGCAGTGGTCCAATATTCACCATTACATATGAATCTGTTTCTTCCAGAAAACACCAAGTGTCTGTaGTGTTCAAGGAGATGCATA | + |
|
Preference number: 2 (lower is better) Translates to: KAAVVQYSPLHMNLFLPENTKCL*CSRRCI Trigger: TATGCATCTCCTTGAACATCACAGACACTTGGTGTT...TTCTGGAAGAAACAGATTCATATGTAATGGTGAATATTGGACCACTGCTGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR TCA 90 bp | CAACACCAAGTGTCTGTGATGTTCAAGGAGATGCATAATTCAAGTTACACTGTTCCCTTCCTGTTTGAATaGCTTATGTGGCTAAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: QHQVSVMFKEMHNSSYTVPFLFE*LMWLNF Trigger: AAAATTTAGCCACATAAGTCATTCAAACAGGAAGGG...AACAGTGTAACTTGAATTATGCATCTCCTTGAACATCACAGACACTTGGTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAAACAATAAACTACAGGATTTCCTGAACAGAAATGAGAGGACCCTGAATGTTTCAGCTCATTCCAAGTaGACGTTATTGAAACACACA | + |
|
Preference number: 2 (lower is better) Translates to: TNNKLQDFLNRNERTLNVSAHSK*TLLKHT Trigger: TGTGTGTTTCAATAACGTTCACTTGGAATGAGCTGA...AACATTCAGGGTCCTCTCATTTCTGTTCAGGAAATCCTGTAGTTTATTGTTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAAACAATAAACTACAGGATTTCCTGAACAGAAATGAGAGGACCCTGAATGTTTATAAGGCAAACACATaGCCATTGCAAACTATAACC | + |
|
Preference number: 2 (lower is better) Translates to: TNNKLQDFLNRNERTLNVYKANT*PLQTIT Trigger: GGTTATAGTTTGCAATGGTCATGTGTTTGCCTTATA...AACATTCAGGGTCCTCTCATTTCTGTTCAGGAAATCCTGTAGTTTATTGTTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCAGTGGTCCAATATTCACCATTACATATGAATCTGTTTCTTCCAGAACTTATTTCTAATTCATCGTaGCTCCATTTAAAGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: AAVVQYSPLHMNLFLPELISNSS*LHLKTQ Trigger: CTGTGTCTTTAAATGGAGCCACGATGAATTAGAAAT...AAGTTCTGGAAGAAACAGATTCATATGTAATGGTGAATATTGGACCACTGCTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR CCA 72 bp | AGGCACCCTGTGGGCATCAGGAATATGGTGGCGCTTTaGCTGCTATCATTTGTGGTTCCAGGGGCCCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RHPVGIRNMVAL*LLSFVVPGAPS Trigger: GGAGGGGGCCCCTGGAACCACAAATGATAGCAGCCAAAGCGCCACCATATTCCTGATGCCCACAGGGTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR GCA 72 bp | ACCCTGTGGGCATCAGGAATATGGTGGCGCTTTGGCTaGTATCATTTGTGGTTCCAGGGGCCCCCTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TLWASGIWWRFG*YHLWFQGPPPS Trigger: GGAAGGAGGGGGCCCCTGGAACCACAAATGATAGCAGCCAAAGCGCCACCATATTCCTGATGCCCACAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 72 bp | TCGTCACAGACAATAGATGAGAAAGGCACCACAGGCTaGAGACCTCACCCCTCCTCCTGGGTCAACAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SSQTIDEKGTTG*RPHPSSWVNRT Trigger: GGTCCTGTTGACCCAGGAGGAGGGGTGAGGTCTCCAGCCTGTGGTGCCTTTCTCATCTATTGTCTGTGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 72 bp | TCAGGAATATGGTGGCGCTTTGGCTGCTATCATTTGTaGTTCCAGGGGCCCCCTCCTTCCATGTCACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SGIWWRFGCYHL*FQGPPPSMSLA Trigger: AGCCAGTGACATGGAAGGAGGGGGCCCCTGGAACCACAAATGATAGCAGCCAAAGCGCCACCATATTCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 72 bp | CTCCTTGTAGGCACCCTGTGGGCATCAGGAATATGGTaGCGCTTTGGCTGCTATCATTTGTGGTTCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLVGTLWASGIW*RFGCYHLWFQG Trigger: CCCCTGGAACCACAAATGATAGCAGCCAAAGCGCCACCATATTCCTGATGCCCACAGGGTGCCTACAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 72 bp | CTTCAGTCTCTGACGTCACTCCTTGTAGGCACCCTGTaGGCATCAGGAATATGGTGGCGCTTTGGCTGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LQSLTSLLVGTL*ASGIWWRFGCY Trigger: ATAGCAGCCAAAGCGCCACCATATTCCTGATGCCCACAGGGTGCCTACAAGGAGTGACGTCAGAGACTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 72 bp | TGTGGCGTGCACGCATGTGTGGGTATACGTGGTACATaGGTACACACTTGGCCATGTGTGTGTAGCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: CGVHACVGIRGT*VHTWPCVCSHK Trigger: CTTGTGGCTACACACACATGGCCAAGTGTGTACCCATGTACCACGTATACCCACACATGCGTGCACGCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 72 bp | TTTTCTCCAGTGGCTTTCATGCCAGAAATGGCTGCCTaGCTGAAGCAAACCTTGGTTGCGTTGCTGGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FSPVAFMPEMAA*LKQTLVALLGG Trigger: GCCACCCAGCAACGCAACCAAGGTTTGCTTCAGCCAGGCAGCCATTTCTGGCATGAAAGCCACTGGAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGTTTTCTCCAGTGGCTTTCATGCCAGAAATGGCTGCCTGGCTGAAGCAAACCTTTGGCTGCTATCATTaGTGGTTCCAGGGGCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SFSPVAFMPEMAAWLKQTFGCYH*WFQGPP Trigger: AGGGGGCCCCTGGAACCACAAATGATAGCAGCCAAA...GGTTTGCTTCAGCCAGGCAGCCATTTCTGGCATGAAAGCCACTGGAGAAAACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR GCA 72 bp | GTCTTCAATTCGATGTGCAGAAAGCCAGAACAAATGTaGCTCTCTCACAGTGTCAGAGCCGCCTCCCGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VFNSMCRKPEQM*LSHSVRAASRQ Trigger: CTGACGGGAGGCGGCTCTGACACTGTGAGAGAGGCACATTTGTTCTGGCTTTCTGCACATCGAATTGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216729.2 |
||
| 3UTR GCA 72 bp | CGTGTTAGCGTGAAGTCAATCTCCCTTGGCCCTTCTTaGTTAACCTTGGCCATGTGCGTCACTGCAGTACTC | + |
|
Preference number: 3 (lower is better) Translates to: RVSVKSISLGPS*LTLAMCVTAVL Trigger: GAGTACTGCAGTGACGCACATGGCCAAGGTTAAGCAAGAAGGGCCAAGGGAGATTGACTTCACGCTAACACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR GCA 72 bp | TTCGTTTTCTCCAGTGGCTTTCATGCCAGAAATGGCTaGCTGGCTGAAGCAAACCTTGGTTGCGTTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FVFSSGFHARNG*LAEANLGCVAG Trigger: CCCAGCAACGCAACCAAGGTTTGCTTCAGCCAGGCAGCCATTTCTGGCATGAAAGCCACTGGAGAAAACGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 72 bp | TCACTCCTTGTAGGCACCCTGTGGGCATCAGGAATATaGTGGCGCTTTGGCTGCTATCATTTGTGGTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLLVGTLWASGI*WRFGCYHLWFQ Trigger: CTGGAACCACAAATGATAGCAGCCAAAGCGCCACCATATTCCTGATGCCCACAGGGTGCCTACAAGGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR GCA 72 bp | TGTCTGCTACTCATTTGCTTGCATCAACCCTCACATTaGATGCTCCCGAAACACACTGTGCTGACCCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLLLICLHQPSH*MLPKHTVLTPS Trigger: AGAGGGGGTCAGCACAGTGTGTTTCGGGAGCATGCAATGTGAGGGTTGATGCAAGCAAATGAGTAGCAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR CCA 72 bp | GCATGTGTGGGTATACGTGGTACATGGGTACACACTTaGCCATGTGTGTGTAGCCACAAGACTGGCATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ACVGIRGTWVHT*PCVCSHKTGIR Trigger: TCTGATGCCAGTCTTGTGGCTACACACACATGGCCAAGTGTGTACCCATGTACCACGTATACCCACACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 72 bp | TCTTTTTGCATGTGTTATGTGGCGTGCACGCATGTGTaGGTATACGTGGTACATGGGTACACACTTGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SFCMCYVACTHV*VYVVHGYTLGH Trigger: ATGGCCAAGTGTGTACCCATGTACCACGTATACCCACACATGCGTGCACGCCACATAACACATGCAAAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 72 bp | AACAGCATAGCCTGCCACGTGAGACCCACTTTCTCATaGGCTGAGAAAACTCTTGCCTTCATAGCGATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NSIACHVRPTFS*AEKTLAFIAIF Trigger: GAAAATCGCTATGAAGGCAAGAGTTTTCTCAGCCCATGAGAAAGTGGGTCTCACGTGGCAGGCTATGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR TCA 72 bp | CATAGCCTGCCACGTGAGACCCACTTTCTCATGGGCTaGGAAAACTCTTGCCTTCATAGCGATTTTCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: HSLPRETHFLMG*ENSCLHSDFHV Trigger: AACATGAAAATCGCTATGAAGGCAAGAGTTTTCTCAGCCCATGAGAAAGTGGGTCTCACGTGGCAGGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR GCA 72 bp | ATCTCCCTTGGCCCTTCTTGCTTAACCTTGGCCATGTaGGTCACTGCAGTACTCAAAGTTTATCTCCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: ISLGPSCLTLAM*VTAVLKVYLLL Trigger: AAGTAGGAGATAAACTTTGAGTACTGCAGTGACGCACATGGCCAAGGTTAAGCAAGAAGGGCCAAGGGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR GCA 72 bp | GACATGAGAACCCAAAATGTCTGCTACTCATTTGCTTaGATCAACCCTCACATTGCATGCTCCCGAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: DMRTQNVCYSFA*INPHIACSRNT Trigger: TGTGTTTCGGGAGCATGCAATGTGAGGGTTGATGCAAGCAAATGAGTAGCAGACATTTTGGGTTCTCATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR TCA 72 bp | CTTTCCCACATGTGTCATGGGGTCTACATTCAGATTTaGACATTCTGTCTTCAATTCGATGTGCAGAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSHMCHGVYIQI*TFCLQFDVQKA Trigger: GGCTTTCTGCACATCGAATTGAAGACAGAATGTTCAAATCTGAATGTAGACCCCATGACACATGTGGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216729.2 |
||
| 3UTR GCA 72 bp | TGCCTTCATAGCGATTTTCATGTTCCATTTATATCATaGTGCTGGAGGGATGAGGACTTAACTGAAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLHSDFHVPFIS*CWRDEDLTEEP Trigger: TGGCTCTTCAGTTAAGTCCTCATCCCTCCAGCAGCATGATATAAATGGAACATGAAAATCGCTATGAAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CCA 72 bp | CATAGCGATTTTCATGTTCCATTTATATCATGCTGCTaGAGGGATGAGGACTTAACTGAAGAGCCAGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HSDFHVPFISCC*RDEDLTEEPEE Trigger: TTCTTCTGGCTCTTCAGTTAAGTCCTCATCCCTCCAGCAGCATGATATAAATGGAACATGAAAATCGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCAGTGGTCCAATATTCACCATTACATATGAATCTGTTTCTTCCAGAACTTGCAGCTACAGTTACATaGATAGCTGTAACCTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: AAVVQYSPLHMNLFLPELAATVT*IAVTYW Trigger: CCAGTAGGTTACAGCTATCAATGTAACTGTAGCTGC...AAGTTCTGGAAGAAACAGATTCATATGTAATGGTGAATATTGGACCACTGCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR GCA 72 bp | ACATTCAGATTTGAACATTCTGTCTTCAATTCGATGTaGAGAAAGCCAGAACAAATGTGCCTCTCTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: TFRFEHSVFNSM*RKPEQMCLSHS Trigger: ACTGTGAGAGAGGCACATTTGTTCTGGCTTTCTGCACATCGAATTGAAGACAGAATGTTCAAATCTGAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216729.2 |
||
| 3UTR CCA 72 bp | ATATCACATGATCACTGTCCTTTCCCACATGTGTCATaGGGTCTACATTCAGATTTGAACATTCTGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ISHDHCPFPHVS*GLHSDLNILSS Trigger: TGAAGACAGAATGTTCAAATCTGAATGTAGACCCCATGACACATGTGGGAAAGGACAGTGATCATGTGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216729.2 |
||
| 3UTR GCA 72 bp | AGTTTATTGGTATTTGACATGAGAACCCAAAATGTCTaGTACTCATTTGCTTGCATCAACCCTCACATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLLVFDMRTQNV*YSFACINPHIA Trigger: TGCAATGTGAGGGTTGATGCAAGCAAATGAGTAGCAGACATTTTGGGTTCTCATGTCAAATACCAATAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | AGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGGTGTCCCCGGCCTCCAATAACACTGTaGGGTCTCCGCAACGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSAGRASCCRTATVRCPRPPITL*GLRNGG Trigger: GCCCCCGTTGCGGAGACCCCACAGTGTTATTGGAGG...CCGGGGACACCTTACAGTCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTGATCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CCA 90 bp | CACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGGCACGCTGTGAGACGTaGGCGGCCTGCCATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HAVEISRESLLLQDGDCKARCET*AACHSS Trigger: TGAAGAATGGCAGGCCGCCCACGTCTCACAGCGTGC...CTTACAGTCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTGATCTCTACCGCGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | AGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGGTGTCCCCGGAGCCATCAGGTATCCTaGTGTCTGCAGGCAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: RSAGRASCCRTATVRCPRSHQVS*CLQAAT Trigger: TGTCGCTGCCTGCAGACATCAGGATACCTGATGGCT...CCGGGGACACCTTACAGTCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTGATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | CACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGCTGATAAGGAAGCTCTaGGGGACCTGCGGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HAVEISRESLLLQDGDCKLIRKL*GTCGSW Trigger: CCATGAGCCGCAGGTCCCGCAGAGCTTCCTTATCAG...CTTACAGTCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTGATCTCTACCGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CAA 72 bp | GTGTCCCCGGAAGGCCGAGAGGTCCACAGGCACGGCTaGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSPEGREVHRHG*SSLKSASRNEY Trigger: GTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCCTGTGGACCTCTCGGCCTTCCGGGGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215286.2 ENSMUST00000216729.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGGTGTCCCCGGAAGGCCGAGAGAAGGAGCCTGTGTACTaGTGGAGGAAGGAATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: ESLLLQDGDCKVSPEGREKEPVY*WRKECT Trigger: CGTGCATTCCTTCCTCCATCAGTACACAGGCTCCTT...CTCTCGGCCTTCCGGGGACACCTTACAGTCGCCGTCCTGCAGCAGGAGGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGGTGTCCCCGGAAGGCCGAGAGCTGGACTTCATCAGATaGTGTCCCAGAAGCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESLLLQDGDCKVSPEGRELDFIR*CPRSLV Trigger: GACCAAGCTTCTGGGACATCATCTGATGAAGTCCAG...CTCTCGGCCTTCCGGGGACACCTTACAGTCGCCGTCCTGCAGCAGGAGGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | GAAAATGGATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGAGAGACGTGGGCGGCCTaGCATTCTTCACAATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENGSSRGRDQPGEPPAAGETWAA*HSSQWA Trigger: AGCCCATTGTGAAGAATGGCAGGCCGCCCACGTCTC...TCCTGCAGCAGGAGGCTCTCCCGGCTGATCTCTACCGCGTGAGGATCCATTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | GGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCGGAGGTATCCTGATGTCTaGAGGCAGCGACAGCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTACPLSKVPAATSTSTRRYPDV*RQRQPL Trigger: AAGCGGCTGTCGCTGCCTGCAGACATCAGGATACCT...CCGAGTGGAGGTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGGTCACTCTCACCATCTaGTCCCATCTTCAGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRGRDQPGEPPAAGRRLVTLTI*SHLQIF Trigger: GAAAATCTGAAGATGGGATCAGATGGTGAGAGTGAC...CAGTCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTGATCTCTACCGCGTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | CCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTTCTAACCTGGGTGCATaGTTAATTAGAGGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHAVEISRESLLLQDGDCSNLGA*LIRGCG Trigger: GCCACAACCTCTAATTAATCATGCACCCAGGTTAGA...ACAGTCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTGATCTCTACCGCGTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | CCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAACAGCTTGACATTGTaGATGCTCATGATGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHAVEISRESLLLQDGDCNSLTL*MLMMFP Trigger: TGGGAACATCATGAGCATGCACAATGTCAAGCTGTT...ACAGTCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTGATCTCTACCGCGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CCA 90 bp | CACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCGGGCGAACTGACTTGGCTCTaGCTAGTCCAAAGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGLSSLKSASRNEYLHSGELTWL*LVQSQP Trigger: TGGCTGACTTTGGACTAGCCAGAGCCAAGTCAGTTC...GCCCGAGTGGAGGTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | GATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGGCAACGGGGGCTTCTTaGAGGAGCCTGTGTACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DILKMDPHAVEISRESLLATGAS*RSLCTD Trigger: ATCAGTACACAGGCTCCTTCAAGAAGCCCCCGTTGC...CAGGAGGCTCTCCCGGCTGATCTCTACCGCGTGAGGATCCATTTTCAGGATATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCCTTCATGGCCTCTTCTaGCGGAACCCTCTTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QARLVLSQKCQPQRVPPLLHGLF*RNPLLR Trigger: TCTAAGAAGAGGGTTCCGGCAGAAGAGGCCATGAAG...GAGTGGAGGTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCGGATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTGCGGAAGTACACGTaGTTCATGGCCTCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPDILKMDPHAVEISRESLRKYT*FMASSA Trigger: GGCAGAAGAGGCCATGAAGCACGTGTACTTCCGCAG...GCTCTCCCGGCTGATCTCTACCGCGTGAGGATCCATTTTCAGGATATCCGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CCA 90 bp | GGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCGGTGCCATTCTTCACAATaGGCTCGTTGTCCTTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTACPLSKVPAATSTSTRCHSSQ*ARCPCY Trigger: GTAGCAAGGACAACGAGCCCATTGTGAAGAATGGCA...CCGAGTGGAGGTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGTCCACAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTAAGAAGCACATCAGGTaGTCGATACCACAGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERSTGTACPLSKVPAATSKKHIR*SIPQGD Trigger: GTCACCCTGTGGTATCGACCACCTGATGTGCTTCTT...ACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCCTGTGGACCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CAA 72 bp | GCATCAGGAATATGGTGGCGCTTTGGCTGCTATCATTaGTGGTTCCAGGGGCCCCCTCCTTCCATGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGIWWRFGCYH*WFQGPPPSMSL Trigger: CAGTGACATGGAAGGAGGGGGCCCCTGGAACCACAAATGATAGCAGCCAAAGCGCCACCATATTCCTGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGCCATCAAGACGGAGAAGCTGGAGGAGCCCTGTGATGACAGTCCCCCTTCCATTCCTGGGCATTaGCATGAAGGAACCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKAIKTEKLEEPCDDSPPSIPGH*HEGTKA Trigger: AGCCTTGGTTCCTTCATGGCAATGCCCAGGAATGGA...AGGGGGACTGTCATCACAGGGCTCCTCCAGCTTCTCCGTCTTGATGGCCTTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | GGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCGGGGTTTCAAGTCCCGGTaGAACACTTTTCTTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: GTACPLSKVPAATSTSTRGFKSR*NTFLLW Trigger: CCATAGAAGAAAAGTGTTGCACCGGGACTTGAAACC...CCGAGTGGAGGTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CCA 90 bp | GAAAATGGATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGCTGCAGGATTGTGGGAACTGACTTaGCTCTGGCTAGTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ENGSSRGRDQPGEPPAAGLWELT*LWLVQS Trigger: ACTTTGGACTAGCCAGAGCCAAGTCAGTTCCCACAA...TCCTGCAGCAGGAGGCTCTCCCGGCTGATCTCTACCGCGTGAGGATCCATTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | CCGAGAGGTCCACAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAAAAGATTTGTCTGTGTaGACGATGTCGTGCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRGPQARLVLSQKCQPQRKDLSV*TMSCKV Trigger: AACCTTGCACGACATCGTTCACACAGACAAATCTTT...TCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCCTGTGGACCTCTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGCCATCAAGACGGAGAAGCTGGAGGAGCCCTGTGATGACAGTCCCCCTGTCGATACCACAGGGTaGCAACTTCATTTGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKAIKTEKLEEPCDDSPPVDTTG*QLHLSR Trigger: CCTACTCAAATGAAGTTGTCACCCTGTGGTATCGAC...AGGGGGACTGTCATCACAGGGCTCCTCCAGCTTCTCCGTCTTGATGGCCTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | GCGCTCTCCCCAGCTCTCTCTTCTAATTGCACAACAAGAACGATAAAGCCTGCTTCCTGGGCATTGCCATaGAGGAACCAAGGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSPALSSNCTTRTIKPASWALP*RNQGFL Trigger: GAGGAAGCCTTGGTTCCTTCATGGCAATGCCCAGGA...AGCAGGCTTTATCGTTCTTGTTGTGCAATTAGAAGAGAGAGCTGGGGAGAGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGCCATCAAGACGGAGAAGCTGGAGGAGCCCTGTGATGACAGTCCCCCTCAGTCATCCATGTATTaGTTCAGGTCTTTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKAIKTEKLEEPCDDSPPQSSMY*FRSLSR Trigger: CCTGGACAAAGACCTGAAGCAATACATGGATGACTG...AGGGGGACTGTCATCACAGGGCTCCTCCAGCTTCTCCGTCTTGATGGCCTTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTCCACAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACTCTTCTATGGCAATATaGCAGACCACGGAGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVHRHGLSSLKSASRNEYSSMAI*QTTENL Trigger: CAAATTCTCCGTGGTCTGGCATATTGCCATAGAAGA...GTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCCTGTGGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGATGAGCAGATAATACCCACAACACTAAAGCAGTCCTCTGGGTTCTTCTCCTCGGCCCCAGGCTaGGGAAGTACACGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSDEQIIPTTLKQSSGFFSSAPG*GSTRAS Trigger: TGAAGCACGTGTACTTCCGCAGCCTGGGGCCGAGGA...GAAGAACCCAGAGGACTGCTTTAGTGTTGTGGGTATTATCTGCTCATCAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | GAAATAAAAAGACTCCACTGGGAAGAGGACAGTGCTGACACACGGAGTTCCCAACTGCTCAGCCAGCTCTaGCAGCGACTCATCAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: EIKRLHWEEDSADTRSSQLLSQL*QRLINR Trigger: ACGATTGATGAGTCGCTGTCAGAGCTGGCTGAGCAG...TTGGGAACTCCGTGTGTCAGCACTGTCCTCTTCCCAGTGGAGTCTTTTTATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCCTTGAATTCATCATTTaGAGAAACACCTGGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QARLVLSQKCQPQRVPPLLEFII*RNTWPS Trigger: ACTTGGCCAGGTGTTTCTTCAAATGATGAATTCAAG...GAGTGGAGGTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTATCATTTGTGGTTCCAGGGGCCCCCTCCTTCCATGTCACTGGCTCACCGAATCTCTTTCAAACTaGATATTGATACGCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AAIICGSRGPLLPCHWLTESLSN*ILIRSR Trigger: CCGAGAGCGTATCAATATTCAGTTTGAAAGAGATTC...GGTGAGCCAGTGACATGGAAGGAGGGGGCCCCTGGAACCACAAATGATAGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTCCACAGGCACGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACTCCTTTATATACTGTTaGATATGTACCCTCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVHRHGLSSLKSASRNEYSFIYC*ICTLSE Trigger: CTCGGAGAGGGTACATATGCAACAGTATATAAAGGA...GTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCGTGCCTGTGGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | CCCACTTTCTCATGGGCTGAGAAAACTCTTGCCTTCATAGCGATTTTCATGTTCTCCTCGGCCCCAGGCTaGGGAAGTACACGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTFSWAEKTLAFIAIFMFSSAPG*GSTRAS Trigger: TGAAGCACGTGTACTTCCGCAGCCTGGGGCCGAGGA...GAACATGAAAATCGCTATGAAGGCAAGAGTTTTCTCAGCCCATGAGAAAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACATTGATAGCTGTGCACGCTGTGAGACGTaGGCGGCCTGCCATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVFLSPAQICSYSYIDSCARCET*AACHSS Trigger: TGAAGAATGGCAGGCCGCCCACGTCTCACAGCGTGC...ACAGCTATCAATGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACATTGATAGCTGTCCTCCAATAACACTGTaGGGTCTCCGCAACGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVFLSPAQICSYSYIDSCPPITL*GLRNGG Trigger: GCCCCCGTTGCGGAGACCCCACAGTGTTATTGGAGG...ACAGCTATCAATGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGTAGGCACCCTGTGGGCATCAGGAATATGGTGGCGCTTTGGCTGCTATCAACACCTGTAGGTGACTaGACTTCATCAGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCRHPVGIRNMVALWLLSTPVGD*TSSDDV Trigger: GACATCATCTGATGAAGTCCAGTCACCTACAGGTGT...TGATAGCAGCCAAAGCGCCACCATATTCCTGATGCCCACAGGGTGCCTACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CAA 72 bp | ATGTCTGCTACTCATTTGCTTGCATCAACCCTCACATaGCATGCTCCCGAAACACACTGTGCTGACCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MSATHLLASTLT*HAPETHCADPL Trigger: GAGGGGGTCAGCACAGTGTGTTTCGGGAGCATGCAATGTGAGGGTTGATGCAAGCAAATGAGTAGCAGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR CAA 72 bp | GCATCAGATGTCTTCCTCACTCACTCTCCACTTTACTaGCTGAGACAGGAACCCTTGCTGAACCCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASDVFLTHSPLY*LRQEPLLNPEL Trigger: GAGCTCTGGGTTCAGCAAGGGTTCCTGTCTCAGCAAGTAAAGTGGAGAGTGAGTGAGGAAGACATCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CAA 72 bp | GAAATGGCTGCCTGGCTGAAGCAAACCTTGGTTGCGTaGCTGGGTGGCGGTAACTTACATTTCCCAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: EMAAWLKQTLVA*LGGGNLHFPDV Trigger: AACATCTGGGAAATGTAAGTTACCGCCACCCAGCAACGCAACCAAGGTTTGCTTCAGCCAGGCAGCCATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGATGAGCAGATAATACCCACAACACTAAAGCAGTCCTCTGGGTTCTTCGCAACGGGGGCTTCTTaGAGGAGCCTGTGTACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSDEQIIPTTLKQSSGFFATGAS*RSLCTD Trigger: ATCAGTACACAGGCTCCTTCAAGAAGCCCCCGTTGC...GAAGAACCCAGAGGACTGCTTTAGTGTTGTGGGTATTATCTGCTCATCAGAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGATGAGCAGATAATACCCACAACACTAAAGCAGTCCTCTGGGTTCTTCTCCTGGGCATTGCCATaGAGGAACCAAGGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSDEQIIPTTLKQSSGFFSWALP*RNQGFL Trigger: GAGGAAGCCTTGGTTCCTTCATGGCAATGCCCAGGA...GAAGAACCCAGAGGACTGCTTTAGTGTTGTGGGTATTATCTGCTCATCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGATGAGCAGATAATACCCACAACACTAAAGCAGTCCTCTGGGTTCTTCTGGGCTCGTTGTCCTTaGTACTGCTCTCCTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSDEQIIPTTLKQSSGFFWARCP*YCSPLW Trigger: CCATAGAGGAGAGCAGTAGCAAGGACAACGAGCCCA...GAAGAACCCAGAGGACTGCTTTAGTGTTGTGGGTATTATCTGCTCATCAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | TCGTTTTCTCCAGTGGCTTTCATGCCAGAAATGGCTGCCTGGCTGAAGCAAACCAGACCACGGAGAATTTaGTACAGGAACAGCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SFSPVAFMPEMAAWLKQTRPRRI*YRNSLT Trigger: TGTCAAGCTGTTCCTGTACCAAATTCTCCGTGGTCT...GGTTTGCTTCAGCCAGGCAGCCATTTCTGGCATGAAAGCCACTGGAGAAAACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| 3UTR CAA 72 bp | ACTCACTCTCCACTTTACTTGCTGAGACAGGAACCCTaGCTGAACCCAGAGCTCATGGATTCAGAATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: THSPLYLLRQEP*LNPELMDSEWS Trigger: AGACCATTCTGAATCCATGAGCTCTGGGTTCAGCAAGGGTTCCTGTCTCAGCAAGTAAAGTGGAGAGTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTGGTAGCTTTTGCTATTACAAAATCGTCACAGACAATAGATGAGAAAGGCAAGCTCTGCGGGACCTaGGGCTCATGGGCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVVAFAITKSSQTIDEKGKLCGT*GSWAGQ Trigger: TTGACCAGCCCATGAGCCGCAGGTCCCGCAGAGCTT...GCCTTTCTCATCTATTGTCTGTGACGATTTTGTAATAGCAAAAGCTACCACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | GTTCGTCTCTTTCCCGGATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGTATAGCTGTACAGGGTaGACCTTCTTCGTGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VRLFPGYPENGSSRGRDQYSCTG*TFFVFQ Trigger: TTGGAACACGAAGAAGGTGCACCCTGTACAGCTATA...CTGATCTCTACCGCGTGAGGATCCATTTTCAGGATATCCGGGAAAGAGACGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CCA 90 bp | TCGTTTTCTCCAGTGGCTTTCATGCCAGAAATGGCTGCCTGGCTGAAGCAAACCAACACTTTTCTTCTATaGCAATATGCCAGACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SFSPVAFMPEMAAWLKQTNTFLL*QYARPR Trigger: CCGTGGTCTGGCATATTGCCATAGAAGAAAAGTGTT...GGTTTGCTTCAGCCAGGCAGCCATTTCTGGCATGAAAGCCACTGGAGAAAACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGCCTAAGACACGATTACCAACACCAAGTGTCTGTGATGTTCAAGGAGATAAGGAGCCTGTGTACTaGTGGAGGAAGGAATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: QMPKTRLPTPSVCDVQGDKEPVY*WRKECT Trigger: CGTGCATTCCTTCCTCCATCAGTACACAGGCTCCTT...ATCTCCTTGAACATCACAGACACTTGGTGTTGGTAATCGTGTCTTAGGCATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | ATAAATAATGCACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACAAGCCATCAGGTATCCTaGTGTCTGCAGGCAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: INNALCFSVRHKSAATVTSHQVS*CLQAAT Trigger: TGTCGCTGCCTGCAGACATCAGGATACCTGATGGCT...TGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGTGCATTATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | GAAATAAAAAGACTCCACTGGGAAGAGGACAGTGCTGACACACGGAGTTCCCAAGGTGACAACTTCATTTaGGTAGGTCTTTGTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EIKRLHWEEDSADTRSSQGDNFI*VGLCGN Trigger: GTTCCCACAAAGACCTACTCAAATGAAGTTGTCACC...TTGGGAACTCCGTGTGTCAGCACTGTCCTCTTCCCAGTGGAGTCTTTTTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | CACGTGAGACCCACTTTCTCATGGGCTGAGAAAACTCTTGCCTTCATAGCGATTGGTGACAACTTCATTTaGGTAGGTCTTTGTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HVRPTFSWAEKTLAFIAIGDNFI*VGLCGN Trigger: GTTCCCACAAAGACCTACTCAAATGAAGTTGTCACC...AATCGCTATGAAGGCAAGAGTTTTCTCAGCCCATGAGAAAGTGGGTCTCACGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR GCA 90 bp | CAAATGCCTAAGACACGATTACCAACACCAAGTGTCTGTGATGTTCAAGGAGATTCCTCTATGGTCATCTaGTCAGCCAGCTCTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QMPKTRLPTPSVCDVQGDSSMVI*SASSDS Trigger: GCTGTCAGAGCTGGCTGAGCAGATGACCATAGAGGA...ATCTCCTTGAACATCACAGACACTTGGTGTTGGTAATCGTGTCTTAGGCATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGTGGTCCAATATTCACCATTACATATGAATCTGTTTCTTCCAGAACTTGAGACGTGGGCGGCCTaGCATTCTTCACAATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAVVQYSPLHMNLFLPELETWAA*HSSQWA Trigger: AGCCCATTGTGAAGAATGGCAGGCCGCCCACGTCTC...AAGTTCTGGAAGAAACAGATTCATATGTAATGGTGAATATTGGACCACTGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGCAGTGGTCCAATATTCACCATTACATATGAATCTGTTTCTTCCAGAAAAGCTCTGCGGGACCTaGGGCTCATGGGCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KAAVVQYSPLHMNLFLPEKLCGT*GSWAGQ Trigger: TTGACCAGCCCATGAGCCGCAGGTCCCGCAGAGCTT...TTCTGGAAGAAACAGATTCATATGTAATGGTGAATATTGGACCACTGCTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | CAACACCAAGTGTCTGTGATGTTCAAGGAGATGCATAATTCAAGTTACACTGTTCTGATAAGGAAGCTCTaGGGGACCTGCGGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QHQVSVMFKEMHNSSYTVLIRKL*GTCGSW Trigger: CCATGAGCCGCAGGTCCCGCAGAGCTTCCTTATCAG...AACAGTGTAACTTGAATTATGCATCTCCTTGAACATCACAGACACTTGGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | ATAAATAATGCACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACACTGCGGAAGTACACGTaGTTCATGGCCTCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: INNALCFSVRHKSAATVTLRKYT*FMASSA Trigger: GGCAGAAGAGGCCATGAAGCACGTGTACTTCCGCAG...TGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGTGCATTATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACATTGATAGCTGTTACTGCTCTCCTCTATaGTCATCTGCTCAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVFLSPAQICSYSYIDSCYCSPL*SSAQPA Trigger: AGCTGGCTGAGCAGATGACCATAGAGGAGAGCAGTA...ACAGCTATCAATGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGATGAGCAGATAATACCCACAACACTAAAGCAGTCCTCTGGGTTCTTCTTGTGGGAACTGACTTaGCTCTGGCTAGTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSDEQIIPTTLKQSSGFFLWELT*LWLVQS Trigger: ACTTTGGACTAGCCAGAGCCAAGTCAGTTCCCACAA...GAAGAACCCAGAGGACTGCTTTAGTGTTGTGGGTATTATCTGCTCATCAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| 3UTR CAA 72 bp | GTGAAGTCAATCTCCCTTGGCCCTTCTTGCTTAACCTaGGCCATGTGCGTCACTGCAGTACTCAAAGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VKSISLGPSCLT*AMCVTAVLKVY Trigger: ATAAACTTTGAGTACTGCAGTGACGCACATGGCCAAGGTTAAGCAAGAAGGGCCAAGGGAGATTGACTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | TACAAGTTCGTCTCTTTCCCGGATATCCTGAAAATGGATCCTCACGCGGTAGAGATTCAAGTCCTCCATTaGGATCCGTCTATGTATACG | + |
|
Preference number: 4 (lower is better) Translates to: YKFVSFPDILKMDPHAVEIQVLH*DPSMYT Trigger: CGTATACATAGACGGATCTCAATGGAGGACTTGAAT...CTCTACCGCGTGAGGATCCATTTTCAGGATATCCGGGAAAGAGACGAACTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACATTGATAGCTGTGTCGATACCACAGGGTaGCAACTTCATTTGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVFLSPAQICSYSYIDSCVDTTG*QLHLSR Trigger: CCTACTCAAATGAAGTTGTCACCCTGTGGTATCGAC...ACAGCTATCAATGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | AGTTACATTGATAGCTGTAACCTACTGGCTCTACTGGCGGAGAAGACCTTAAAATCCATTCCTGGGCATTaGCATGAAGGAACCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYIDSCNLLALLAEKTLKSIPGH*HEGTKA Trigger: AGCCTTGGTTCCTTCATGGCAATGCCCAGGAATGGA...TTTTAAGGTCTTCTCCGCCAGTAGAGCCAGTAGGTTACAGCTATCAATGTAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACATTGATAGCTGTTGCCATTCTTCACAATaGGCTCGTTGTCCTTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TVFLSPAQICSYSYIDSCCHSSQ*ARCPCY Trigger: GTAGCAAGGACAACGAGCCCATTGTGAAGAATGGCA...ACAGCTATCAATGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | GAAATAAAAAGACTCCACTGGGAAGAGGACAGTGCTGACACACGGAGTTCCCAAAACACTTTTCTTCTATaGCAATATGCCAGACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: EIKRLHWEEDSADTRSSQNTFLL*QYARPR Trigger: CCGTGGTCTGGCATATTGCCATAGAAGAAAAGTGTT...TTGGGAACTCCGTGTGTCAGCACTGTCCTCTTCCCAGTGGAGTCTTTTTATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | CTAAAGCAGTCCTCTGGGTTCTTCTTTCTCATTTCTAATTCATCGTGGCTCCATGAACTGACTTGGCTCTaGCTAGTCCAAAGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKQSSGFFFLISNSSWLHELTWL*LVQSQP Trigger: TGGCTGACTTTGGACTAGCCAGAGCCAAGTCAGTTC...ATGGAGCCACGATGAATTAGAAATGAGAAAGAAGAACCCAGAGGACTGCTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | AGTTACATTGATAGCTGTAACCTACTGGCTCTACTGGCGGAGAAGACCTTAAAAAAGAAGCACATCAGGTaGTCGATACCACAGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SYIDSCNLLALLAEKTLKKKHIR*SIPQGD Trigger: GTCACCCTGTGGTATCGACCACCTGATGTGCTTCTT...TTTTAAGGTCTTCTCCGCCAGTAGAGCCAGTAGGTTACAGCTATCAATGTAACT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | GAAATAAAAAGACTCCACTGGGAAGAGGACAGTGCTGACACACGGAGTTCCCAAGAATCTCTTTCAAACTaGATATTGATACGCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: EIKRLHWEEDSADTRSSQESLSN*ILIRSR Trigger: CCGAGAGCGTATCAATATTCAGTTTGAAAGAGATTC...TTGGGAACTCCGTGTGTCAGCACTGTCCTCTTCCCAGTGGAGTCTTTTTATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | CAAATGCCTAAGACACGATTACCAACACCAAGTGTCTGTGATGTTCAAGGAGATCGTTGTCCTTGCTACTaGTCTCCTCTATGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QMPKTRLPTPSVCDVQGDRCPCY*SPLWSS Trigger: AGATGACCATAGAGGAGAGCAGTAGCAAGGACAACG...ATCTCCTTGAACATCACAGACACTTGGTGTTGGTAATCGTGTCTTAGGCATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACAATAAACTACAGGATTTCCTGAACAGAAATGAGAGGACCCTGAATGTTAGGTATCCTGATGTCTaGAGGCAGCGACAGCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TNNKLQDFLNRNERTLNVRYPDV*RQRQPL Trigger: AAGCGGCTGTCGCTGCCTGCAGACATCAGGATACCT...AACATTCAGGGTCCTCTCATTTCTGTTCAGGAAATCCTGTAGTTTATTGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGATGAGCAGATAATACCCACAACACTAAAGCAGTCCTCTGGGTTCTTCAACAGCTTGACATTGTaGATGCTCATGATGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSDEQIIPTTLKQSSGFFNSLTL*MLMMFP Trigger: TGGGAACATCATGAGCATGCACAATGTCAAGCTGTT...GAAGAACCCAGAGGACTGCTTTAGTGTTGTGGGTATTATCTGCTCATCAGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTGACAACTGTGAAAGCAGCAGTGGTCCAATATTCACCATTACATATGAATCTTCATGGCCTCTTCTaGCGGAACCCTCTTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLTTVKAAVVQYSPLHMNLHGLF*RNPLLR Trigger: TCTAAGAAGAGGGTTCCGGCAGAAGAGGCCATGAAG...ATTCATATGTAATGGTGAATATTGGACCACTGCTGCTTTCACAGTTGTCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | ACTCACTCTCCACTTTACTTGCTGAGACAGGAACCCTTGCTGAACCCAGAGCTCTTGTGGCTTGTATTTTaGGAAGTTGTAGTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: THSPLYLLRQEPLLNPELLWLVF*EVVVLE Trigger: TTCAAGAACTACAACTTCCCAAAATACAAGCCACAA...GAGCTCTGGGTTCAGCAAGGGTTCCTGTCTCAGCAAGTAAAGTGGAGAGTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGATGAGCAGATAATACCCACAACACTAAAGCAGTCCTCTGGGTTCTTCCCCATGTCCTGTCTCTaGATAAGAAGAGTTTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSDEQIIPTTLKQSSGFFPMSCL*IRRVSK Trigger: TTTCGAAACTCTTCTTATCCAGAGACAGGACATGGG...GAAGAACCCAGAGGACTGCTTTAGTGTTGTGGGTATTATCTGCTCATCAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | CAAATGCCTAAGACACGATTACCAACACCAAGTGTCTGTGATGTTCAAGGAGATTCTAACCTGGGTGCATaGTTAATTAGAGGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QMPKTRLPTPSVCDVQGDSNLGA*LIRGCG Trigger: GCCACAACCTCTAATTAATCATGCACCCAGGTTAGA...ATCTCCTTGAACATCACAGACACTTGGTGTTGGTAATCGTGTCTTAGGCATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | CAAATGCCTAAGACACGATTACCAACACCAAGTGTCTGTGATGTTCAAGGAGATTATAGCTGTACAGGGTaGACCTTCTTCGTGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QMPKTRLPTPSVCDVQGDYSCTG*TFFVFQ Trigger: TTGGAACACGAAGAAGGTGCACCCTGTACAGCTATA...ATCTCCTTGAACATCACAGACACTTGGTGTTGGTAATCGTGTCTTAGGCATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | ATAAATAATGCACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACAGTCACTCTCACCATCTaGTCCCATCTTCAGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: INNALCFSVRHKSAATVTVTLTI*SHLQIF Trigger: GAAAATCTGAAGATGGGATCAGATGGTGAGAGTGAC...TGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGTGCATTATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | ACAAACAATAAACTACAGGATTTCCTGAACAGAAATGAGAGGACCCTGAATGTTCTGGACTTCATCAGATaGTGTCCCAGAAGCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TNNKLQDFLNRNERTLNVLDFIR*CPRSLV Trigger: GACCAAGCTTCTGGGACATCATCTGATGAAGTCCAG...AACATTCAGGGTCCTCTCATTTCTGTTCAGGAAATCCTGTAGTTTATTGTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | CTAAAGCAGTCCTCTGGGTTCTTCTTTCTCATTTCTAATTCATCGTGGCTCCATATTCAAGTCCTCCATTaGGATCCGTCTATGTATACG | + |
|
Preference number: 4 (lower is better) Translates to: LKQSSGFFFLISNSSWLHIQVLH*DPSMYT Trigger: CGTATACATAGACGGATCTCAATGGAGGACTTGAAT...ATGGAGCCACGATGAATTAGAAATGAGAAAGAAGAACCCAGAGGACTGCTTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACATTGATAGCTGTTCCTTTATATACTGTTaGATATGTACCCTCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVFLSPAQICSYSYIDSCSFIYC*ICTLSE Trigger: CTCGGAGAGGGTACATATGCAACAGTATATAAAGGA...ACAGCTATCAATGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | AGTTACATTGATAGCTGTAACCTACTGGCTCTACTGGCGGAGAAGACCTTAAAATCTTCTATGGCAATATaGCAGACCACGGAGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SYIDSCNLLALLAEKTLKSSMAI*QTTENL Trigger: CAAATTCTCCGTGGTCTGGCATATTGCCATAGAAGA...TTTTAAGGTCTTCTCCGCCAGTAGAGCCAGTAGGTTACAGCTATCAATGTAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | ATAAATAATGCACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACAGGTTTCAAGTCCCGGTaGAACACTTTTCTTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: INNALCFSVRHKSAATVTGFKSR*NTFLLW Trigger: CCATAGAAGAAAAGTGTTGCACCGGGACTTGAAACC...TGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGTGCATTATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTGACAACTGTGAAAGCAGCAGTGGTCCAATATTCACCATTACATATGAATACACCTGTAGGTGACTaGACTTCATCAGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QLTTVKAAVVQYSPLHMNTPVGD*TSSDDV Trigger: GACATCATCTGATGAAGTCCAGTCACCTACAGGTGT...ATTCATATGTAATGGTGAATATTGGACCACTGCTGCTTTCACAGTTGTCAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | ATAAATAATGCACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACAAAAGATTTGTCTGTGTaGACGATGTCGTGCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: INNALCFSVRHKSAATVTKDLSV*TMSCKV Trigger: AACCTTGCACGACATCGTTCACACAGACAAATCTTT...TGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGTGCATTATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTGACAACTGTGAAAGCAGCAGTGGTCCAATATTCACCATTACATATGAATGAACAATATCTAGTCTaGTTCCATTCCTGGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QLTTVKAAVVQYSPLHMNEQYLV*FHSWAL Trigger: CAATGCCCAGGAATGGAAGCAGACTAGATATTGTTC...ATTCATATGTAATGGTGAATATTGGACCACTGCTGCTTTCACAGTTGTCAGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR TCA 90 bp | ATAAATAATGCACTGTGTTTCTCAGTCCGGCACAAATCTGCAGCTACAGTTACACTTGAATTCATCATTTaGAGAAACACCTGGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: INNALCFSVRHKSAATVTLEFII*RNTWPS Trigger: ACTTGGCCAGGTGTTTCTTCAAATGATGAATTCAAG...TGTAACTGTAGCTGCAGATTTGTGCCGGACTGAGAAACACAGTGCATTATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACAATAAACTACAGGATTTCCTGAACAGAAATGAGAGGACCCTGAATGTTCAGTCATCCATGTATTaGTTCAGGTCTTTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNNKLQDFLNRNERTLNVQSSMY*FRSLSR Trigger: CCTGGACAAAGACCTGAAGCAATACATGGATGACTG...AACATTCAGGGTCCTCTCATTTCTGTTCAGGAAATCCTGTAGTTTATTGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | ACAAACAATAAACTACAGGATTTCCTGAACAGAAATGAGAGGACCCTGAATGTTAGACCACGGAGAATTTaGTACAGGAACAGCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TNNKLQDFLNRNERTLNVRPRRI*YRNSLT Trigger: TGTCAAGCTGTTCCTGTACCAAATTCTCCGTGGTCT...AACATTCAGGGTCCTCTCATTTCTGTTCAGGAAATCCTGTAGTTTATTGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CCA 90 bp | CATGAGAACCCAAAATGTCTGCTACTCATTTGCTTGCATCAACCCTCACATTGCTTGTGGCTTGTATTTTaGGAAGTTGTAGTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HENPKCLLLICLHQPSHCLWLVF*EVVVLE Trigger: TTCAAGAACTACAACTTCCCAAAATACAAGCCACAA...GCAATGTGAGGGTTGATGCAAGCAAATGAGTAGCAGACATTTTGGGTTCTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR GCA 90 bp | AAAACTCTTGCCTTCATAGCGATTTTCATGTTCCATTTATATCATGCTGCTGGAGAACAATATCTAGTCTaGTTCCATTCCTGGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KTLAFIAIFMFHLYHAAGEQYLV*FHSWAL Trigger: CAATGCCCAGGAATGGAAGCAGACTAGATATTGTTC...TCCAGCAGCATGATATAAATGGAACATGAAAATCGCTATGAAGGCAAGAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGGTGTCCCCGGAAGGCCGAGAGTGGTACAGGAACAGCTaGACATTGTGCATGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ESLLLQDGDCKVSPEGREWYRNS*TLCMLM Trigger: CATGAGCATGCACAATGTCAAGCTGTTCCTGTACCA...CTCTCGGCCTTCCGGGGACACCTTACAGTCGCCGTCCTGCAGCAGGAGGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS GCA 90 bp | ATATTGATACGCTCTCGGGCAAAGCATGGATCCTCGGCCCCAGGCTaGGGAAGTACACGTGCTTCATGGCCTCTTCTGCCGGAACCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILIRSRAKHGSSAPG*GSTRASWPLLPEPS Trigger: AGAGGGTTCCGGCAGAAGAGGCCATGAAGCACGTGTACTTCCGCAGCCTGGGGCCGAGGATCCATGCTTTGCCCGAGAGCGTATCAATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS-3UTR CAA 90 bp | AGATCAGCCGGGAGAGCCTCCTGCTGCAGGACGGCGACTGTAAGGTGTCCCCGGAGGAACAGCTTGACATaGTGCATGCTCATGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSAGRASCCRTATVRCPRRNSLT*CMLMMF Trigger: GAACATCATGAGCATGCACAATGTCAAGCTGTTCCT...CCGGGGACACCTTACAGTCGCCGTCCTGCAGCAGGAGGCTCTCCCGGCTGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS GCA 90 bp | TGGGCGGCCTGCCATTCTTCACAATGGGCTCGTTGTCCTTGCTACTaGTCTCCTCTATGGTCATCTGCTCAGCCAGCTCTGACAGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: WAACHSSQWARCPCY*SPLWSSAQPALTAT Trigger: AGTCGCTGTCAGAGCTGGCTGAGCAGATGACCATAGAGGAGAGCAGTAGCAAGGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 |
||
| CDS GCA 90 bp | GAGACGTGGGCGGCCTGCCATTCTTCACAATGGGCTCGTTGTCCTTaGTACTGCTCTCCTCTATGGTCATCTGCTCAGCCAGCTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ETWAACHSSQWARCP*YCSPLWSSAQPALT Trigger: TGTCAGAGCTGGCTGAGCAGATGACCATAGAGGAGAGCAGTAGCAAGGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCCACGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 |
||
| CDS GCA 90 bp | TCGGGCAAAGCATGGATCCTCGGCCCCAGGCTGCGGAAGTACACGTaGTTCATGGCCTCTTCTGCCGGAACCCTCTTCTTAGATTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: SGKAWILGPRLRKYT*FMASSAGTLFLDSY Trigger: GTATGAATCTAAGAAGAGGGTTCCGGCAGAAGAGGCCATGAAGCACGTGTACTTCCGCAGCCTGGGGCCGAGGATCCATGCTTTGCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS CCA 90 bp | AGGAGCCTGTGTACTGATGGAGGAAGGAATGCACGCTGTGAGACGTaGGCGGCCTGCCATTCTTCACAATGGGCTCGTTGTCCTTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: RSLCTDGGRNARCET*AACHSSQWARCPCY Trigger: GTAGCAAGGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCCACGTCTCACAGCGTGCATTCCTTCCTCCATCAGTACACAGGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 ENSMUST00000215286.2 |
||
| CDS-3UTR CAA 90 bp | CGGCTTGTCCTCTCTCAAAAGTGCCAGCCGCAACGAGTACCTCCACTCGGGCCTTTTGTGGGAACTGACTaGGCTCTGGCTAGTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RLVLSQKCQPQRVPPLGPFVGTD*ALASPK Trigger: CTTTGGACTAGCCAGAGCCAAGTCAGTTCCCACAAA...AGGCCCGAGTGGAGGTACTCGTTGCGGCTGGCACTTTTGAGAGAGGACAAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS GCA 90 bp | TGTACTGATGGAGGAAGGAATGCACGCTGTGAGACGTGGGCGGCCTaGCATTCTTCACAATGGGCTCGTTGTCCTTGCTACTGCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CTDGGRNARCETWAA*HSSQWARCPCYCSP Trigger: AGGAGAGCAGTAGCAAGGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCCACGTCTCACAGCGTGCATTCCTTCCTCCATCAGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 |
||
| CDS CCA 90 bp | AGGAATGCACGCTGTGAGACGTGGGCGGCCTGCCATTCTTCACAATaGGCTCGTTGTCCTTGCTACTGCTCTCCTCTATGGTCATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RNARCETWAACHSSQ*ARCPCYCSPLWSSA Trigger: AGCAGATGACCATAGAGGAGAGCAGTAGCAAGGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCCACGTCTCACAGCGTGCATTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 |
||
| CDS CCA 90 bp | CATTCTTCACAATGGGCTCGTTGTCCTTGCTACTGCTCTCCTCTATaGTCATCTGCTCAGCCAGCTCTGACAGCGACTCATCAATCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSSQWARCPCYCSPL*SSAQPALTATHQSS Trigger: AGACGATTGATGAGTCGCTGTCAGAGCTGGCTGAGCAGATGACCATAGAGGAGAGCAGTAGCAAGGACAACGAGCCCATTGTGAAGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 |
||
| CDS GCA 90 bp | CCTCGGCCCCAGGCTGCGGAAGTACACGTGCTTCATGGCCTCTTCTaGCGGAACCCTCTTCTTAGATTCATACTGAAGAAATTTTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PRPQAAEVHVLHGLF*RNPLLRFILKKFCY Trigger: ATAACAAAATTTCTTCAGTATGAATCTAAGAAGAGGGTTCCGGCAGAAGAGGCCATGAAGCACGTGTACTTCCGCAGCCTGGGGCCGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS-3UTR CAA 90 bp | GATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGCCGGGAGAGCCTCCTGAAAACCCGGGTCCTTTaGCAACTGAATCTCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DILKMDPHAVEISRESLLKTRVL*QLNLFQ Trigger: TTGAAAGAGATTCAGTTGCAAAAGGACCCGGGTTTT...CAGGAGGCTCTCCCGGCTGATCTCTACCGCGTGAGGATCCATTTTCAGGATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CAA 90 bp | TCGTTTTCTCCAGTGGCTTTCATGCCAGAAATGGCTGCCTGGCTGAAGCAAACCTATTCAAGTCCTCCATaGAGATCCGTCTATGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: SFSPVAFMPEMAAWLKQTYSSPP*RSVYVY Trigger: GTATACATAGACGGATCTCAATGGAGGACTTGAATA...GGTTTGCTTCAGCCAGGCAGCCATTTCTGGCATGAAAGCCACTGGAGAAAACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS GCA 90 bp | TCTCCTCTCTCATTAATGAGGAGGTTCTGTGGTTTCAAGTCCCGGTaGAACACTTTTCTTCTATGGCAATATGCCAGACCACGGAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: SPLSLMRRFCGFKSR*NTFLLWQYARPRRI Trigger: AATTCTCCGTGGTCTGGCATATTGCCATAGAAGAAAAGTGTTGCACCGGGACTTGAAACCACAGAACCTCCTCATTAATGAGAGAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS-3UTR CAA 90 bp | GTTCGTCTCTTTCCCGGATATCCTGAAAATGGATCCTCACGCGGTAGAGATCAGTTCCTTTATATACTGTaGCATATGTACCCTCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VRLFPGYPENGSSRGRDQFLYIL*HMYPLR Trigger: TCGGAGAGGGTACATATGCAACAGTATATAAAGGAA...CTGATCTCTACCGCGTGAGGATCCATTTTCAGGATATCCGGGAAAGAGACGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215286.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCTGATGAGCAGATAATACCCACAACACTAAAGCAGTCCTCTGGGTTCTTCAGGAACAGCTTGACATaGTGCATGCTCATGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSDEQIIPTTLKQSSGFFRNSLT*CMLMMF Trigger: GAACATCATGAGCATGCACAATGTCAAGCTGTTCCT...GAAGAACCCAGAGGACTGCTTTAGTGTTGTGGGTATTATCTGCTCATCAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CAA 90 bp | CAAATGCCTAAGACACGATTACCAACACCAAGTGTCTGTGATGTTCAAGGAGATTTTGTGGGAACTGACTaGGCTCTGGCTAGTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QMPKTRLPTPSVCDVQGDFVGTD*ALASPK Trigger: CTTTGGACTAGCCAGAGCCAAGTCAGTTCCCACAAA...ATCTCCTTGAACATCACAGACACTTGGTGTTGGTAATCGTGTCTTAGGCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CAA 90 bp | CAAATGCCTAAGACACGATTACCAACACCAAGTGTCTGTGATGTTCAAGGAGATAAAACCCGGGTCCTTTaGCAACTGAATCTCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QMPKTRLPTPSVCDVQGDKTRVL*QLNLFQ Trigger: TTGAAAGAGATTCAGTTGCAAAAGGACCCGGGTTTT...ATCTCCTTGAACATCACAGACACTTGGTGTTGGTAATCGTGTCTTAGGCATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CAA 90 bp | AGTTACATTGATAGCTGTAACCTACTGGCTCTACTGGCGGAGAAGACCTTAAAATTCCTTTATATACTGTaGCATATGTACCCTCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SYIDSCNLLALLAEKTLKFLYIL*HMYPLR Trigger: TCGGAGAGGGTACATATGCAACAGTATATAAAGGAA...TTTTAAGGTCTTCTCCGCCAGTAGAGCCAGTAGGTTACAGCTATCAATGTAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGCAGTGGTCCAATATTCACCATTACATATGAATCTGTTTCTTCCAGAATGGTACAGGAACAGCTaGACATTGTGCATGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: KAAVVQYSPLHMNLFLPEWYRNS*TLCMLM Trigger: CATGAGCATGCACAATGTCAAGCTGTTCCTGTACCA...TTCTGGAAGAAACAGATTCATATGTAATGGTGAATATTGGACCACTGCTGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGCAGTGGTCCAATATTCACCATTACATATGAATCTGTTTCTTCCAGAATATTGCTTCAGGTCTTaGTCCAGGTACTCAAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: KAAVVQYSPLHMNLFLPEYCFRS*SRYSKT Trigger: GGTCTTTGAGTACCTGGACAAAGACCTGAAGCAATA...TTCTGGAAGAAACAGATTCATATGTAATGGTGAATATTGGACCACTGCTGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS-3UTR CAA 90 bp | CAACACCAAGTGTCTGTGATGTTCAAGGAGATGCATAATTCAAGTTACACTGTTTATTCAAGTCCTCCATaGAGATCCGTCTATGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: QHQVSVMFKEMHNSSYTVYSSPP*RSVYVY Trigger: GTATACATAGACGGATCTCAATGGAGGACTTGAATA...AACAGTGTAACTTGAATTATGCATCTCCTTGAACATCACAGACACTTGGTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069965.9 |
||
| CDS GCA 72 bp | CGCTCTCGGGCAAAGCATGGATCCTCGGCCCCAGGCTaGGGAAGTACACGTGCTTCATGGCCTCTTCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSRAKHGSSAPG*GSTRASWPLLP Trigger: CGGCAGAAGAGGCCATGAAGCACGTGTACTTCCGCAGCCTGGGGCCGAGGATCCATGCTTTGCCCGAGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS CCA 72 bp | TCTGCGGGACCTGCGGCTCATGGGCTGGTCAAAGGGTaGGCTGCTGATCTGCAGCTTCTCCAGGTAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SAGPAAHGLVKG*AADLQLLQVAI Trigger: GATGGCTACCTGGAGAAGCTGCAGATCAGCAGCCCACCCTTTGACCAGCCCATGAGCCGCAGGTCCCGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS GCA 72 bp | GCATGGATCCTCGGCCCCAGGCTGCGGAAGTACACGTaGTTCATGGCCTCTTCTGCCGGAACCCTCTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: AWILGPRLRKYT*FMASSAGTLFL Trigger: TAAGAAGAGGGTTCCGGCAGAAGAGGCCATGAAGCACGTGTACTTCCGCAGCCTGGGGCCGAGGATCCATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS GCA 72 bp | GGAGGAAGGAATGCACGCTGTGAGACGTGGGCGGCCTaGCATTCTTCACAATGGGCTCGTTGTCCTTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: GGRNARCETWAA*HSSQWARCPCY Trigger: GTAGCAAGGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCCACGTCTCACAGCGTGCATTCCTTCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 ENSMUST00000215286.2 |
||
| CDS CCA 72 bp | CGCTGTGAGACGTGGGCGGCCTGCCATTCTTCACAATaGGCTCGTTGTCCTTGCTACTGCTCTCCTCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: RCETWAACHSSQ*ARCPCYCSPLW Trigger: CCATAGAGGAGAGCAGTAGCAAGGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCCACGTCTCACAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 |
||
| CDS CCA 72 bp | GCCATGAAGGAACCAAGGCTTCCTCCAATAACACTGTaGGGTCTCCGCAACGGGGGCTTCTTGAAGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AMKEPRLPPITL*GLRNGGFLKEP Trigger: AGGCTCCTTCAAGAAGCCCCCGTTGCGGAGACCCCACAGTGTTATTGGAGGAAGCCTTGGTTCCTTCATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS CAA 72 bp | GACGTGGGCGGCCTGCCATTCTTCACAATGGGCTCGTaGTCCTTGCTACTGCTCTCCTCTATGGTCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DVGGLPFFTMGS*SLLLLSSMVIC Trigger: GCAGATGACCATAGAGGAGAGCAGTAGCAAGGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCCACGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 |
||
| CDS TCA 72 bp | ACTGCTCTCCTCTATGGTCATCTGCTCAGCCAGCTCTaGCAGCGACTCATCAATCGTCTGGCTTCCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TALLYGHLLSQL*QRLINRLASPE Trigger: CTCAGGGGAAGCCAGACGATTGATGAGTCGCTGTCAGAGCTGGCTGAGCAGATGACCATAGAGGAGAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 ENSMUST00000214445.2 |
||
| CDS CCA 72 bp | TGTACTGATGGAGGAAGGAATGCACGCTGTGAGACGTaGGCGGCCTGCCATTCTTCACAATGGGCTCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CTDGGRNARCET*AACHSSQWARC Trigger: ACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCCACGTCTCACAGCGTGCATTCCTTCCTCCATCAGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 ENSMUST00000215286.2 |
||
| CDS GCA 72 bp | CCATTTTCCCAAACCCAATTTCTGATAAGGAAGCTCTaGGGGACCTGCGGCTCATGGGCTGGTCAAAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PFSQTQFLIRKL*GTCGSWAGQRV Trigger: CACCCTTTGACCAGCCCATGAGCCGCAGGTCCCGCAGAGCTTCCTTATCAGAAATTGGGTTTGGGAAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS CCA 72 bp | CAATGGGCTCGTTGTCCTTGCTACTGCTCTCCTCTATaGTCATCTGCTCAGCCAGCTCTGACAGCGACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QWARCPCYCSPL*SSAQPALTATH Trigger: ATGAGTCGCTGTCAGAGCTGGCTGAGCAGATGACCATAGAGGAGAGCAGTAGCAAGGACAACGAGCCCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 |
||
| CDS CCA 72 bp | TTCAAACTGAATATTGATACGCTCTCGGGCAAAGCATaGATCCTCGGCCCCAGGCTGCGGAAGTACACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FKLNIDTLSGKA*ILGPRLRKYTC Trigger: GCACGTGTACTTCCGCAGCCTGGGGCCGAGGATCCATGCTTTGCCCGAGAGCGTATCAATATTCAGTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS GCA 72 bp | TCGTTGTCCTTGCTACTGCTCTCCTCTATGGTCATCTaGTCAGCCAGCTCTGACAGCGACTCATCAATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLSLLLLSSMVI*SASSDSDSSIV Trigger: GACGATTGATGAGTCGCTGTCAGAGCTGGCTGAGCAGATGACCATAGAGGAGAGCAGTAGCAAGGACAACGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000213378.2 |
||
| CDS GCA 72 bp | CAGGCTGCGGAAGTACACGTGCTTCATGGCCTCTTCTaGCGGAACCCTCTTCTTAGATTCATACTGAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QAAEVHVLHGLF*RNPLLRFILKK Trigger: TTTCTTCAGTATGAATCTAAGAAGAGGGTTCCGGCAGAAGAGGCCATGAAGCACGTGTACTTCCGCAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS TCA 72 bp | TGCAGGCAGCGACAGCCGCTTATTCAAGTCCTCCATTaGGATCCGTCTATGTATACGATTTCTGAGGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: CRQRQPLIQVLH*DPSMYTISEAN Trigger: GTTTGCCTCAGAAATCGTATACATAGACGGATCTCAATGGAGGACTTGAATAAGCGGCTGTCGCTGCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS CCA 72 bp | TGTGGTTTCAAGTCCCGGTGCAACACTTTTCTTCTATaGCAATATGCCAGACCACGGAGAATTTGGTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: CGFKSRCNTFLL*QYARPRRIWYR Trigger: CCTGTACCAAATTCTCCGTGGTCTGGCATATTGCCATAGAAGAAAAGTGTTGCACCGGGACTTGAAACCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS CCA 72 bp | TGTATACGATTTCTGAGGCAAACACCTGTAGGTGACTaGACTTCATCAGATGATGTCCCAGAAGCTTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CIRFLRQTPVGD*TSSDDVPEAWS Trigger: TGACCAAGCTTCTGGGACATCATCTGATGAAGTCCAGTCACCTACAGGTGTTTGCCTCAGAAATCGTATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS CAA 72 bp | AGAAAATACAGCCAACTCCCCACATGTCGATCTGTGTaGAGTATTCTGAGGAACCAAGAAGCACATCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RKYSQLPTCRSV*SILRNQEAHQV Trigger: CACCTGATGTGCTTCTTGGTTCCTCAGAATACTCAACACAGATCGACATGTGGGGAGTTGGCTGTATTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS GCA 72 bp | TCATTAATGAGGAGGTTCTGTGGTTTCAAGTCCCGGTaGAACACTTTTCTTCTATGGCAATATGCCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: SLMRRFCGFKSR*NTFLLWQYARP Trigger: TGGTCTGGCATATTGCCATAGAAGAAAAGTGTTGCACCGGGACTTGAAACCACAGAACCTCCTCATTAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||
| CDS TCA 72 bp | CTGTTGCATATGTACCCTCTCCGAGCTTTTCCAATTTaGTGTAGGTTTCCATTTTCCCAAACCCAATTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLHMYPLRAFPI*CRFPFSQTQFL Trigger: CAGAAATTGGGTTTGGGAAAATGGAAACCTACATCAAATTGGAAAAGCTCGGAGAGGGTACATATGCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069965.9 ENSMUST00000215286.2 |
||