Pregenerated sensors for CDK16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031065Ensembl transcript IDs: ENSMUST00000033380.7, ENSMUST00000115364.8
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCAGGTAAGCAGGCAACAAGCAGGGAGGATTGCAGATGGGGGCTaGCCTGTAAGGGGTGTGGCATCCCTCCAGCCGCTGCCTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: RQVSRQQAGRIADGG*PVRGVASLQPLPAG Trigger: CCCAGCAGGCAGCGGCTGGAGGGATGCCACACCCCTTACAGGGCAGCCCCCATCTGCAATCCTCCCTGCTTGTTGCCTGCTTACCTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR CCA 90 bp | GTGGCTCAGGCAGGTAAGCAGGCAACAAGCAGGGAGGATTGCAGATaGGGGCTGCCCTGTAAGGGGTGTGGCATCCCTCCAGCCGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: VAQAGKQATSREDCR*GLPCKGCGIPPAAA Trigger: GGCAGCGGCTGGAGGGATGCCACACCCCTTACAGGGCAGCCCCCATCTGCAATCCTCCCTGCTTGTTGCCTGCTTACCTGCCTGAGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR GCA 90 bp | GGGAGTGTGGCTCAGGCAGGTAAGCAGGCAACAAGCAGGGAGGATTaGAGATGGGGGCTGCCCTGTAAGGGGTGTGGCATCCCTCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: GSVAQAGKQATSRED*RWGLPCKGCGIPPA Trigger: GGCTGGAGGGATGCCACACCCCTTACAGGGCAGCCCCCATCTGCAATCCTCCCTGCTTGTTGCCTGCTTACCTGCCTGAGCCACACTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR CCA 90 bp | CAGGCCAATGGTTGGGTTGACAGGCCAGGCCAGTGGTTTGGTGTTTaGGCAGGTGGCAGGGGACAAGTTGGCAGGGGAGTGTGGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: QANGWVDRPGQWFGV*AGGRGQVGRGVWLR Trigger: CCTGAGCCACACTCCCCTGCCAACTTGTCCCCTGCCACCTGCCCAAACACCAAACCACTGGCCTGGCCTGTCAACCCAACCATTGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR GCA 90 bp | GGAGGAAGGGGAGCAAACCATACATCCAGGAGACTGTCCTTGGCCTaGCTTACCCTCCTAGGGACTGGAGTGTTACAATTGGGCACAAGC | + |
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Preference number: 1 (lower is better) Translates to: GGRGANHTSRRLSLA*LTLLGTGVLQLGTS Trigger: GCTTGTGCCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR CCA 90 bp | TACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTaGAGTGTTACAATTGGGCACAAGCTCGCACATGTCCCCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: YIQETVLGLPYPPRD*SVTIGHKLAHVPLL Trigger: AAGCAGGGGGACATGTGCGAGCTTGTGCCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR TCA 90 bp | ATGCTTTCCCATAGCCAATCCCAGGGTATAGTGATGGTCAGGATCTaGATAGGGTCTGGGTCCCTACCTCTCAAAGGCTGGGAGTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: MLSHSQSQGIVMVRI*IGSGSLPLKGWEWD Trigger: GTCCCACTCCCAGCCTTTGAGAGGTAGGGACCCAGACCCTATTCAGATCCTGACCATCACTATACCCTGGGATTGGCTATGGGAAAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR GCA 90 bp | CCATACAACAGAGGCAAGTGGGACAGGTGGCAAGCAGGCAGAGGATaGTCAGACCCAAGGCATCACTCACTACCTTCTAGTCAAAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: PYNRGKWDRWQAGRG*SDPRHHSLPSSQSQ Trigger: TTGACTTTGACTAGAAGGTAGTGAGTGATGCCTTGGGTCTGAGCATCCTCTGCCTGCTTGCCACCTGTCCCACTTGCCTCTGTTGTATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR CCA 90 bp | TGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCTaGTCAATTCCTGGCAGAGCCCCTACTCAACAGCACCGAGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: CPPACAHIIYGSSLS*SIPGRAPTQQHRVG Trigger: TCCTACTCGGTGCTGTTGAGTAGGGGCTCTGCCAGGAATTGACCAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR CCA 90 bp | TTGTGCACATATTATATATGGCTCCTCACTAAGCTGGTCAATTCCTaGCAGAGCCCCTACTCAACAGCACCGAGTAGGACAGGACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LCTYYIWLLTKLVNS*QSPYSTAPSRTGQE Trigger: CTCCTGTCCTGTCCTACTCGGTGCTGTTGAGTAGGGGCTCTGCCAGGAATTGACCAGCTTAGTGAGGAGCCATATATAATATGTGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR GCA 90 bp | GGAGTGTTACAATTGGGCACAAGCTCGCACATGTCCCCCTGCTTGTaGACATATTATATATGGCTCCTCACTAAGCTGGTCAATTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: GVLQLGTSSHMSPCL*TYYIWLLTKLVNSW Trigger: CCAGGAATTGACCAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGCTTGTGCCCAATTGTAACACTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR GCA 90 bp | GGGACTGGAGTGTTACAATTGGGCACAAGCTCGCACATGTCCCCCTaGTTGTGCACATATTATATATGGCTCCTCACTAAGCTGGTCAAT | + |
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Preference number: 1 (lower is better) Translates to: GTGVLQLGTSSHMSP*LCTYYIWLLTKLVN Trigger: ATTGACCAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGCTTGTGCCCAATTGTAACACTCCAGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | GCACCCTCCCTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGTGGCAGGGGACAAGTTaGCAGGGGAGTGTGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: APSLALPPRLRVPRLKVEWQGTS*QGSVAQ Trigger: CTGAGCCACACTCCCCTGCCAACTTGTCCCCTGCCA...CTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAGGGAGGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCTGGGCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTGGTAGGGGAGGAAGGTaGGTGGCTGAGGCATGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QSWAGEDPEKERGPGYGTGRGGR*VAEACF Trigger: AAAGCATGCCTCAGCCACTCACCTTCCTCCCCTACC...AGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGCCCAGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | GCACCCTCCCTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGTACAACAGAGGCAAGTaGGACAGGTGGCAAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: APSLALPPRLRVPRLKVEYNRGK*DRWQAG Trigger: GCCTGCTTGCCACCTGTCCCACTTGCCTCTGTTGTA...CTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAGGGAGGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGAGGAAGGTGAGTGGCTaGGGCATGCTTTCCCATAGC | + |
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Preference number: 2 (lower is better) Translates to: LALPPRLRVPRLKVEEGERKVSG*GMLSHS Trigger: GCTATGGGAAAGCATGCCTCAGCCACTCACCTTCCT...CTCCCCTTCCTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGCAAGCAGGCAGAGGATaGTCAGACCCAAGGCATCAC | + |
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Preference number: 2 (lower is better) Translates to: LALPPRLRVPRLKVEEGEQAGRG*SDPRHH Trigger: GTGATGCCTTGGGTCTGAGCATCCTCTGCCTGCTTG...CTCCCCTTCCTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAGGGGAGCAAACCATACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCGGCCAATGGTTGGGTTaGCAGGCCAGGCCAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: EEGEQTIHPGDCPWPALPGQWLG*QARPVV Trigger: AACCACTGGCCTGGCCTGTCAACCCAACCATTGGCC...GGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGCAACTACCCAGCCGCTGCCTGCTaGGGCCTTGGTCTGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GLALVWKPGMAILFTSNYPAAAC*GLGLSV Trigger: CACAGACAGACCAAGGCCCCAGCAGGCAGCGGCTGG...GTAGTTGCTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAAGGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGAGGGAGGATTGCAGATaGGGGCTGCCCTGTAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: RGRPSLSVETWHGHSVHQREDCR*GLPCKG Trigger: CCCCTTACAGGGCAGCCCCCATCTGCAATCCTCCCT...CTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCCTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCTGGGCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTTGTGGAAACCTGGCATaGCCATTCTGTTCACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: QSWAGEDPEKERGPGYGTCGNLA*PFCSPA Trigger: TGCTGGTGAACAGAATGGCCATGCCAGGTTTCCACA...AGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGCCCAGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACGGCAAGTGGGACAGGTaGCAAGCAGGCAGAGGATGC | + |
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Preference number: 2 (lower is better) Translates to: RRKEALATGLKEGKSSPHGKWDR*QAGRGC Trigger: GCATCCTCTGCCTGCTTGCCACCTGTCCCACTTGCC...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | TACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTGGCAAGTGGGACAGGTaGCAAGCAGGCAGAGGATGC | + |
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Preference number: 2 (lower is better) Translates to: YIQETVLGLPYPPRDWSVGKWDR*QAGRGC Trigger: GCATCCTCTGCCTGCTTGCCACCTGTCCCACTTGCC...AACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR TCA 90 bp | GGACTAAAGGAGGGAAAAAGTAGCCCCCACCATGTCCATCTCCCAGTCTCTGGTGGCCAATGGTTGGGTTaGCAGGCCAGGCCAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: GLKEGKSSPHHVHLPVSGGQWLG*QARPVV Trigger: AACCACTGGCCTGGCCTGTCAACCCAACCATTGGCC...ACCAGAGACTGGGAGATGGACATGGTGGGGGCTACTTTTTCCCTCCTTTAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAAGGTAGGGGAGGAAGGTaGGTGGCTGAGGCATGCTTT | + |
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Preference number: 2 (lower is better) Translates to: SRRLSLACLTLLGTGVLQGRGGR*VAEACF Trigger: AAAGCATGCCTCAGCCACTCACCTTCCTCCCCTACC...TTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCCATCCCTCCAGCCGCTaGCTGCTGGGGCCTTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: ARTCPPACAHIIYGSSLSHPSSR*LLGPWS Trigger: AGACCAAGGCCCCAGCAGGCAGCGGCTGGAGGGATG...GCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGCAAACCATACATCCAGGAGACTACAAGCAGGGAGGATTaGAGATGGGGGCTGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: GSQGLRWRKGSKPYIQETTSRED*RWGLPC Trigger: ACAGGGCAGCCCCCATCTGCAATCCTCCCTGCTTGT...AGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTCCACCTTAAGCCTTGGGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAAACAAGCAGGGAGGATTaGAGATGGGGGCTGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SRRLSLACLTLLGTGVLQTSRED*RWGLPC Trigger: ACAGGGCAGCCCCCATCTGCAATCCTCCCTGCTTGT...TTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | GGACTAAAGGAGGGAAAAAGTAGCCCCCACCATGTCCATCTCCCAGTCTCTGGTGCCAGGCCAGTGGTTTaGTGTTTGGGCAGGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GLKEGKSSPHHVHLPVSGARPVV*CLGRWQ Trigger: CTGCCACCTGCCCAAACACCAAACCACTGGCCTGGC...ACCAGAGACTGGGAGATGGACATGGTGGGGGCTACTTTTTCCCTCCTTTAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAAGACAGGCCAGGCCAGTaGTTTGGTGTTTGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SRRLSLACLTLLGTGVLQDRPGQ*FGVWAG Trigger: ACCTGCCCAAACACCAAACCACTGGCCTGGCCTGTC...TTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | GAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAATTGGGGACAGGCCAGGCCAGTaGTTTGGTGTTTGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: ETVLGLPYPPRDWSVTIGDRPGQ*FGVWAG Trigger: ACCTGCCCAAACACCAAACCACTGGCCTGGCCTGTC...CCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACAGACAGGCCAATGGTTaGGTTGACAGGCCAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RRKEALATGLKEGKSSPHRQANG*VDRPGQ Trigger: CTGGCCTGGCCTGTCAACCCAACCATTGGCCTGTCT...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACCTCCAAATCCCTGGCTaGCCATGGGGTAGTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: RRKEALATGLKEGKSSPHLQIPG*PWGSGP Trigger: AGGACCACTACCCCATGGCCAGCCAGGGATTTGGAG...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCTGGGCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTGGAGTGGGACTTCATTaGACAAAATACTGTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QSWAGEDPEKERGPGYGTGVGLH*TKYCRR Trigger: CCTCCTACAGTATTTTGTGCAATGAAGTCCCACTCC...AGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGCCCAGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGGGAGTGGGACTTCATTaGACAAAATACTGTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LALPPRLRVPRLKVEEGEGVGLH*TKYCRR Trigger: CCTCCTACAGTATTTTGTGCAATGAAGTCCCACTCC...CTCCCCTTCCTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGCCATACTCAGGGAGTAGCGCCCAACCAGTCTGTATACAGAGATATTGCTGGTGTTTGGGCAGGTaGCAGGGGACAAGTTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GGPYSGSSAQPVCIQRYCWCLGR*QGTSWQ Trigger: CTGCCAACTTGTCCCCTGCCACCTGCCCAAACACCA...GCAATATCTCTGTATACAGACTGGTTGGGCGCTACTCCCTGAGTATGGCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR TCA 90 bp | TACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTGTGATGGTCAGGATCTaGATAGGGTCTGGGTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: YIQETVLGLPYPPRDWSVVMVRI*IGSGSL Trigger: TAGGGACCCAGACCCTATTCAGATCCTGACCATCAC...AACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCATCCCTGGCTGGCCATaGGGTAGTGGTCCTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ARTCPPACAHIIYGSSLSIPGWP*GSGPGR Trigger: TCTCCCAGGACCACTACCCCATGGCCAGCCAGGGAT...GCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | GGACTAAAGGAGGGAAAAAGTAGCCCCCACCATGTCCATCTCCCAGTCTCTGGTTACAACAGAGGCAAGTaGGACAGGTGGCAAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GLKEGKSSPHHVHLPVSGYNRGK*DRWQAG Trigger: GCCTGCTTGCCACCTGTCCCACTTGCCTCTGTTGTA...ACCAGAGACTGGGAGATGGACATGGTGGGGGCTACTTTTTCCCTCCTTTAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR GCA 90 bp | TCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCTGATTGCAGATGGGGGCTaGCCTGTAAGGGGTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SHMSPCLCTYYIWLLTKLIADGG*PVRGVA Trigger: TGCCACACCCCTTACAGGGCAGCCCCCATCTGCAAT...CAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | TCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCTGCTCCAAATCCCTGGCTaGCCATGGGGTAGTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SHMSPCLCTYYIWLLTKLLQIPG*PWGSGP Trigger: AGGACCACTACCCCATGGCCAGCCAGGGATTTGGAG...CAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAAAGTCAATTAAGAGCCTaGCCTGGGCTAGCTCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: SRRLSLACLTLLGTGVLQSQLRA*PGLAPN Trigger: ATTTGGAGCTAGCCCAGGCCAGGCTCTTAATTGACT...TTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAACTCAAAGGCTGGGAGTaGGACTTCATTGCACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: SRRLSLACLTLLGTGVLQLKGWE*DFIAQN Trigger: ATTTTGTGCAATGAAGTCCCACTCCCAGCCTTTGAG...TTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| 3UTR-3UTR TCA 90 bp | TCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCTGGTGATGGTCAGGATCTaGATAGGGTCTGGGTCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: SHMSPCLCTYYIWLLTKLVMVRI*IGSGSL Trigger: TAGGGACCCAGACCCTATTCAGATCCTGACCATCAC...CAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR CAA 90 bp | ACTGGAGTGTTACAATTGGGCACAAGCTCGCACATGTCCCCCTGCTaGTGCACATATTATATATGGCTCCTCACTAAGCTGGTCAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: TGVLQLGTSSHMSPC*CTYYIWLLTKLVNS Trigger: GGAATTGACCAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGCTTGTGCCCAATTGTAACACTCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR GCA 72 bp | AGCAGGCAACAAGCAGGGAGGATTGCAGATGGGGGCTaGCCTGTAAGGGGTGTGGCATCCCTCCAGCCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SRQQAGRIADGG*PVRGVASLQPL Trigger: CAGCGGCTGGAGGGATGCCACACCCCTTACAGGGCAGCCCCCATCTGCAATCCTCCCTGCTTGTTGCCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCTGGCAGAGCCCCTACTCAACAGCACCGAGTAGGACAGGACAGGAGGGCTCCAGTGGTTTGGTGTTaGGGCAGGTGGCAGGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: IPGRAPTQQHRVGQDRRAPVVWC*GRWQGT Trigger: TGTCCCCTGCCACCTGCCCAAACACCAAACCACTGG...AGCCCTCCTGTCCTGTCCTACTCGGTGCTGTTGAGTAGGGGCTCTGCCAGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAGGGGAGCAAACCATACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCGGCCAGGCCAGTGGTTaGGTGTTTGGGCAGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: EEGEQTIHPGDCPWPALPGQASG*VFGQVA Trigger: TGCCACCTGCCCAAACACCAAACCACTGGCCTGGCC...GGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAGGGGAGCAAACCATACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCCTGCCTGCTGGGGCCTaGGTCTGTCTGTGGCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: EEGEQTIHPGDCPWPALPLPAGA*VCLWLK Trigger: TTTAAGCCACAGACAGACCAAGGCCCCAGCAGGCAG...GGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGCCATACTCAGGGAGTAGCGCCCAACCAGTCTGTATACAGAGATATTGCGGCCAGGCCAGTGGTTaGGTGTTTGGGCAGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GGPYSGSSAQPVCIQRYCGQASG*VFGQVA Trigger: TGCCACCTGCCCAAACACCAAACCACTGGCCTGGCC...GCAATATCTCTGTATACAGACTGGTTGGGCGCTACTCCCTGAGTATGGCCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACCTGCCTGCTGGGGCCTaGGTCTGTCTGTGGCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RRKEALATGLKEGKSSPHLPAGA*VCLWLK Trigger: TTTAAGCCACAGACAGACCAAGGCCCCAGCAGGCAG...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR GCA 72 bp | AGAGGCAAGTGGGACAGGTGGCAAGCAGGCAGAGGATaGTCAGACCCAAGGCATCACTCACTACCTTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RGKWDRWQAGRG*SDPRHHSLPSS Trigger: ACTAGAAGGTAGTGAGTGATGCCTTGGGTCTGAGCATCCTCTGCCTGCTTGCCACCTGTCCCACTTGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR CCA 72 bp | GAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTaGAGTGTTACAATTGGGCACAAGCTCGCACATGTC | + |
|
Preference number: 3 (lower is better) Translates to: ETVLGLPYPPRD*SVTIGHKLAHV Trigger: GACATGTGCGAGCTTGTGCCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR CCA 72 bp | CCAGGGTATAGTGATGGTCAGGATCTGAATAGGGTCTaGGTCCCTACCTCTCAAAGGCTGGGAGTGGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: PGYSDGQDLNRV*VPTSQRLGVGL Trigger: AAGTCCCACTCCCAGCCTTTGAGAGGTAGGGACCCAGACCCTATTCAGATCCTGACCATCACTATACCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR GCA 72 bp | GTCCCTACCTCTCAAAGGCTGGGAGTGGGACTTCATTaGACAAAATACTGTAGGAGGGCCATACTCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VPTSQRLGVGLH*TKYCRRAILRE Trigger: CTCCCTGAGTATGGCCCTCCTACAGTATTTTGTGCAATGAAGTCCCACTCCCAGCCTTTGAGAGGTAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR CCA 72 bp | CACTCACTACCTTCTAGTCAAAGTCAATTAAGAGCCTaGCCTGGGCTAGCTCCAAATCCCTGGCTGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: HSLPSSQSQLRA*PGLAPNPWLAM Trigger: CATGGCCAGCCAGGGATTTGGAGCTAGCCCAGGCCAGGCTCTTAATTGACTTTGACTAGAAGGTAGTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAATTGGGCACATGTCCCCCTGCTaGTGCACATATTATATATGG | + |
|
Preference number: 3 (lower is better) Translates to: ETVLGLPYPPRDWSVTIGHMSPC*CTYYIW Trigger: CCATATATAATATGTGCACAAGCAGGGGGACATGTG...CCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR GCA 72 bp | CAATTGGGCACAAGCTCGCACATGTCCCCCTGCTTGTaGACATATTATATATGGCTCCTCACTAAGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QLGTSSHMSPCL*TYYIWLLTKLV Trigger: GACCAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGCTTGTGCCCAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR CCA 72 bp | TCGCACATGTCCCCCTGCTTGTGCACATATTATATATaGCTCCTCACTAAGCTGGTCAATTCCTGGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SHMSPCLCTYYI*LLTKLVNSWQS Trigger: GCTCTGCCAGGAATTGACCAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR CCA 72 bp | TATTATATATGGCTCCTCACTAAGCTGGTCAATTCCTaGCAGAGCCCCTACTCAACAGCACCGAGTAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: YYIWLLTKLVNS*QSPYSTAPSRT Trigger: TGTCCTACTCGGTGCTGTTGAGTAGGGGCTCTGCCAGGAATTGACCAGCTTAGTGAGGAGCCATATATAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR CCA 72 bp | GCTTGTGCACATATTATATATGGCTCCTCACTAAGCTaGTCAATTCCTGGCAGAGCCCCTACTCAACAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: ACAHIIYGSSLS*SIPGRAPTQQH Trigger: GTGCTGTTGAGTAGGGGCTCTGCCAGGAATTGACCAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGCTGGGCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTACTGCAGCAGCTTGGTaGGGAGGTCAGCTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSWAGEDPEKERGPGYGTTAAAW*GGQLHR Trigger: GCGATGGAGCTGACCTCCTCACCAAGCTGCTGCAGT...AGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGCCCAGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGCTCGTGCACAATCTCTaGTGCAGAGCTGAGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LALPPRLRVPRLKVEEGELVHNL*CRAEWA Trigger: GGCCCACTCAGCTCTGCACCAGAGATTGTGCACGAG...CTCCCCTTCCTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR CCA 90 bp | AGGGGAAGGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGTTCCACTGTGGAGCCTaGGAAGAGGGGCCGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGRPSLSVETWHGHSVHQFHCGA*EEGPAG Trigger: ACCGGCCGGCCCCTCTTCCCAGGCTCCACAGTGGAA...CTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCCTTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACTTCCACTGTGGAGCCTaGGAAGAGGGGCCGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRKEALATGLKEGKSSPHFHCGA*EEGPAG Trigger: ACCGGCCGGCCCCTCTTCCCAGGCTCCACAGTGGAA...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR CAA 72 bp | AGGCCAATGGTTGGGTTGACAGGCCAGGCCAGTGGTTaGGTGTTTGGGCAGGTGGCAGGGGACAAGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPMVGLTGQASG*VFGQVAGDKLA Trigger: TGCCAACTTGTCCCCTGCCACCTGCCCAAACACCAAACCACTGGCCTGGCCTGTCAACCCAACCATTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGGATGTGGCTGAAGCCTaGTCACTCTCCCCATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LALPPRLRVPRLKVEEGEDVAEA*SLSPSD Trigger: ATCTGATGGGGAGAGTGACCAGGCTTCAGCCACATC...CTCCCCTTCCTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGGGGAGCAAACCATACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCGCTGTTCTTCCACTGTaGAGCCTGGGAAGAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EEGEQTIHPGDCPWPALPAVLPL*SLGRGA Trigger: GGCCCCTCTTCCCAGGCTCCACAGTGGAAGAACAGC...GGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAAACTGCAGCAGCTTGGTaGGGAGGTCAGCTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRRLSLACLTLLGTGVLQTAAAW*GGQLHR Trigger: GCGATGGAGCTGACCTCCTCACCAAGCTGCTGCAGT...TTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGACTCTCACTGGAGACTaGACCTCATCTGAGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LALPPRLRVPRLKVEEGETLTGD*TSSEDV Trigger: CACATCCTCAGATGAGGTGCAGTCTCCAGTGAGAGT...CTCCCCTTCCTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACGGGGGTGGTTGCGCATaGGCACTCTCACTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RRKEALATGLKEGKSSPHGGGCA*ALSLET Trigger: AGTCTCCAGTGAGAGTGCGCATGCGCAACCACCCCC...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTGGGCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTCAGTCATCCAGGTACTaGTTCAGGTCCTTGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSWAGEDPEKERGPGYGTQSSRY*FRSLSK Trigger: CTTGGACAAGGACCTGAAGCAGTACCTGGATGACTG...AGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGCCCAGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGGCAGGGGAGTGTGGCTCAGGCAGGTAAGCAGGCAACAAGCAGGGAGGGCTCAGGGACACCATTaGTCTTATCTATGCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVGRGVWLRQVSRQQAGRAQGHH*SYLCLG Trigger: GCCGAGGCATAGATAAGACCAATGGTGTCCCTGAGC...CCTCCCTGCTTGTTGCCTGCTTACCTGCCTGAGCCACACTCCCCTGCCAACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGCCTCATCTGAGGATGTaGCTGAAGCCTGGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGEDPEKERGPGYGTKGGPHLRM*LKPGHS Trigger: AGAGTGACCAGGCTTCAGCCACATCCTCAGATGAGG...CCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAATTGGGAGTGGAGATCTTGCGTaGGGGGTGGTTGCGCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: ETVLGLPYPPRDWSVTIGSGDLA*GVVAHA Trigger: CGCATGCGCAACCACCCCCCACGCAAGATCTCCACT...CCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGAAGGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGAGTGGAGATCTTGCGTaGGGGGTGGTTGCGCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGRPSLSVETWHGHSVHQSGDLA*GVVAHA Trigger: CGCATGCGCAACCACCCCCCACGCAAGATCTCCACT...CTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCCTTCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACAGAGGGGCCGGCCGGTaGCCATCTCATAGAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RRKEALATGLKEGKSSPHRGAGR*PSHRRC Trigger: GCATCTTCTATGAGATGGCCACCGGCCGGCCCCTCT...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAATTGGGGCTGTTCTTCCACTGTaGAGCCTGGGAAGAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETVLGLPYPPRDWSVTIGAVLPL*SLGRGA Trigger: GGCCCCTCTTCCCAGGCTCCACAGTGGAAGAACAGC...CCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAATTGGGTCAAGTCGGGGTGCATaGCTCAGAAGGGCCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETVLGLPYPPRDWSVTIGSSRGA*LRRASA Trigger: AGCCGAGGCCCTTCTGAGCCATGCACCCCGACTTGA...CCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACTCAAGTCGGGGTGCATaGCTCAGAAGGGCCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRKEALATGLKEGKSSPHSSRGA*LRRASA Trigger: AGCCGAGGCCCTTCTGAGCCATGCACCCCGACTTGA...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGCAACTACGTGCACAATCTCTGGTaGAGAGCTGAGTGGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLALVWKPGMAILFTSNYVHNLW*RAEWAP Trigger: CGGGGCCCACTCAGCTCTGCACCAGAGATTGTGCAC...GTAGTTGCTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTGGGCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTATCTTCATGTCCTCGTaGACAATCTCTGGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSWAGEDPEKERGPGYGTIFMSS*TISGAE Trigger: CTCTGCACCAGAGATTGTGCACGAGGACATGAAGAT...AGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGCCCAGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR GCA 90 bp | GGAGGGCCATACTCAGGGAGTAGCGCCCAACCAGTCTGTATACAGAGATATTGCGGGGGTGGTTGCGCATaGGCACTCTCACTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GGPYSGSSAQPVCIQRYCGGGCA*ALSLET Trigger: AGTCTCCAGTGAGAGTGCGCATGCGCAACCACCCCC...GCAATATCTCTGTATACAGACTGGTTGGGCGCTACTCCCTGAGTATGGCCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGAAGGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGGCTATCAAGTCGGGGTaGATGGCTCAGAAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGRPSLSVETWHGHSVHQAIKSG*MAQKGL Trigger: GAGGCCCTTCTGAGCCATGCACCCCGACTTGATAGC...CTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCCTTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCTGGCAGAGCCCCTACTCAACAGCACCGAGTAGGACAGGACAGGAGGGCTATCTTCATGTCCTCGTaGACAATCTCTGGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPGRAPTQQHRVGQDRRAIFMSS*TISGVG Trigger: CCCCACCCCAGAGATTGTGCACGAGGACATGAAGAT...AGCCCTCCTGTCCTGTCCTACTCGGTGCTGTTGAGTAGGGGCTCTGCCAGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GGACTAAAGGAGGGAAAAAGTAGCCCCCACCATGTCCATCTCCCAGTCTCTGGTTGGTGCAGAGCTGAGTaGGCCCCGAACAGAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKEGKSSPHHVHLPVSGWCRAE*APNRAK Trigger: CTTCGCTCTGTTCGGGGCCCACTCAGCTCTGCACCA...ACCAGAGACTGGGAGATGGACATGGTGGGGGCTACTTTTTCCCTCCTTTAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR CCA 90 bp | GCACCCAGCAGACAGGCCAATGGTTGGGTTGACAGGCCAGGCCAGTGGTTTGGTAGGCCACGGAGCAACTaGAACAGGAACAGTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: APSRQANGWVDRPGQWFGRPRSN*NRNSFT Trigger: TGTGAAACTGTTCCTGTTCCAGTTGCTCCGTGGCCT...ACCAAACCACTGGCCTGGCCTGTCAACCCAACCATTGGCCTGTCTGCTGGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | AGTGATGGTCAGGATCTGAATAGGGTCTGGGTCCCTACCTCTCAAAGGCTGGGAAGAGGGGCCGGCCGGTaGCCATCTCATAGAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SDGQDLNRVWVPTSQRLGRGAGR*PSHRRC Trigger: GCATCTTCTATGAGATGGCCACCGGCCGGCCCCTCT...TCCCAGCCTTTGAGAGGTAGGGACCCAGACCCTATTCAGATCCTGACCATCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | GCACCCAGCAGACAGGCCAATGGTTGGGTTGACAGGCCAGGCCAGTGGTTTGGTCCAGCTTGTCTAGCTTaGTGTAGGTCTCCAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: APSRQANGWVDRPGQWFGPACLA*CRSPVF Trigger: GAAAACTGGAGACCTACATCAAGCTAGACAAGCTGG...ACCAAACCACTGGCCTGGCCTGTCAACCCAACCATTGGCCTGTCTGCTGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGGCAGAGCCCCTACTCAACAGCACCGAGTAGGACAGGACAGGAGGGCTTGTTTTAGTAGGAATTaGCTTGGCACGAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPGRAPTQQHRVGQDRRACFSRN*LGTSQA Trigger: GGCCTGGCTCGTGCCAAGTCAATTCCTACTAAAACA...AGCCCTCCTGTCCTGTCCTACTCGGTGCTGTTGAGTAGGGGCTCTGCCAGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | GCACCCAGCAGACAGGCCAATGGTTGGGTTGACAGGCCAGGCCAGTGGTTTGGTATGCGGAAGATGAAGTaGAGCTGTTCTTCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: APSRQANGWVDRPGQWFGMRKMK*SCSSTV Trigger: CACAGTGGAAGAACAGCTGCACTTCATCTTCCGCAT...ACCAAACCACTGGCCTGGCCTGTCAACCCAACCATTGGCCTGTCTGCTGGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | AGTGATGGTCAGGATCTGAATAGGGTCTGGGTCCCTACCTCTCAAAGGCTGGGAGCTATCAAGTCGGGGTaGATGGCTCAGAAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDGQDLNRVWVPTSQRLGAIKSG*MAQKGL Trigger: GAGGCCCTTCTGAGCCATGCACCCCGACTTGATAGC...TCCCAGCCTTTGAGAGGTAGGGACCCAGACCCTATTCAGATCCTGACCATCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAGAATGGATGTTTCCTaGCATCCTCAGCAGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: AGEDPEKERGPGYGTKGGRMDVS*HPQQRS Trigger: GGATCTCTGCTGAGGATGCCAGGAAACATCCATTCT...CCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACGTGTCAGGAAGTTTGTaGATCCGCTCCCCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRKEALATGLKEGKSSPHVSGSL*IRSPKL Trigger: CAGCTTGGGGGAGCGGATCCACAAACTTCCTGACAC...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCTGGGCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTAAGTGGACCGAATGTTaGCCTCCTTTTGTAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QSWAGEDPEKERGPGYGTKWTEC*PPFVAV Trigger: TACAGCTACAAAAGGAGGCCAACATTCGGTCCACTT...AGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGCCCAGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR CAA 72 bp | GGAAGGGGAGCAAACCATACATCCAGGAGACTGTCCTaGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GRGANHTSRRLS*ACLTLLGTGVL Trigger: TAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTATGGTTTGCTCCCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGGCAGAGCCCCTACTCAACAGCACCGAGTAGGACAGGACAGGAGGGCTTTGACAGCTGCCGTTTaGTCTTCTTCATCCGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: IPGRAPTQQHRVGQDRRALTAAV*SSSSDP Trigger: TGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAA...AGCCCTCCTGTCCTGTCCTACTCGGTGCTGTTGAGTAGGGGCTCTGCCAGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR TCA 90 bp | AGGGGAAGGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGCCCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGRPSLSVETWHGHSVHQPSECH*QLPFDL Trigger: AAGATCAAACGGCAGCTGTCAATGACACTCCGAGGG...CTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCCTTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR TCA 90 bp | GAGGAAGGGGAGCAAACCATACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCTGTTTTAGTAGGAATTaGCTTGGCACGAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EEGEQTIHPGDCPWPALPCFSRN*LGTSQA Trigger: GGCCTGGCTCGTGCCAAGTCAATTCCTACTAAAACA...GGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | TACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTTCATCCAGGCCTATCTaGTCAGGGACACCATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YIQETVLGLPYPPRDWSVSSRPI*SGTPLV Trigger: GACCAATGGTGTCCCTGAGCAGATAGGCCTGGATGA...AACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTGGGCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTTCTGATCTCCTTAAGTaGTACAAGGTTGTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSWAGEDPEKERGPGYGTSDLLK*YKVVCE Trigger: CTCACAGACAACCTTGTAGCACTTAAGGAGATCAGA...AGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGCCCAGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTAAGCAGGCAACAAGCAGGGAGGATTGCAGATGGGGGCTGCCCTGTAAGGCCATCTCATAGAAGATaGAGCCTACACCCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: QVSRQQAGRIADGGCPVRPSHRR*SLHPTC Trigger: ACATGTGGGGTGTAGGCTGCATCTTCTATGAGATGG...CCTTACAGGGCAGCCCCCATCTGCAATCCTCCCTGCTTGTTGCCTGCTTACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGCAAACCATACATCCAGGAGACTCAGCAGAGATCCGATTaGGACCCTCAAACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSQGLRWRKGSKPYIQETQQRSD*DPQTAA Trigger: TGCTGCAGTTTGAGGGTCGCAATCGGATCTCTGCTG...AGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTCCACCTTAAGCCTTGGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | GAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAATTGGGCAGCAGAGATCCGATTaGGACCCTCAAACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETVLGLPYPPRDWSVTIGQQRSD*DPQTAA Trigger: TGCTGCAGTTTGAGGGTCGCAATCGGATCTCTGCTG...CCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGAAGGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGCCTCATCTGAGGATGTaGCTGAAGCCTGGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRPSLSVETWHGHSVHQPHLRM*LKPGHS Trigger: AGAGTGACCAGGCTTCAGCCACATCCTCAGATGAGG...CTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCCTTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGAGGGACTTCTCTGTGTaGATAATGTCATGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LALPPRLRVPRLKVEEGERDFSV*IMSCSV Trigger: CACACTACATGACATTATCCACACAGAGAAGTCCCT...CTCCCCTTCCTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGCAAACCATACATCCAGGAGACTCAAAGATGGGGCTATTaGGGGTCAGCTTCTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQGLRWRKGSKPYIQETQRWGY*GSASQG Trigger: ACCTTGAGAAGCTGACCCTCAATAGCCCCATCTTTG...AGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTCCACCTTAAGCCTTGGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTAAGCAGGCAACAAGCAGGGAGGATTGCAGATGGGGGCTGCCCTGTAAGGCTACAAGGTTGTCTGTaGGCTTGCTTTTGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVSRQQAGRIADGGCPVRLQGCL*ACFCLC Trigger: ACAAAGGCAAAAGCAAGCTCACAGACAACCTTGTAG...CCTTACAGGGCAGCCCCCATCTGCAATCCTCCCTGCTTGTTGCCTGCTTACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | GCACCCAGCAGACAGGCCAATGGTTGGGTTGACAGGCCAGGCCAGTGGTTTGGTAGTGTCATTGACAGCTaGCGTTTGATCTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: APSRQANGWVDRPGQWFGSVIDS*RLIFFI Trigger: GATGAAGAAGATCAAACGGCAGCTGTCAATGACACT...ACCAAACCACTGGCCTGGCCTGTCAACCCAACCATTGGCCTGTCTGCTGGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR GCA 90 bp | TACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTGTGACGATGTTGGCATaGTTGAGGTCCTTAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YIQETVLGLPYPPRDWSVVTMLA*LRSLSR Trigger: CCTGCTTAAGGACCTCAAGCATGCCAACATCGTCAC...AACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGCAAACCATACATCCAGGAGACTGTGACGATGTTGGCATaGTTGAGGTCCTTAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSQGLRWRKGSKPYIQETVTMLA*LRSLSR Trigger: CCTGCTTAAGGACCTCAAGCATGCCAACATCGTCAC...AGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTCCACCTTAAGCCTTGGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGCAAACCATACATCCAGGAGACTCAGTCATCCAGGTACTaGTTCAGGTCCTTGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSQGLRWRKGSKPYIQETQSSRY*FRSLSK Trigger: CTTGGACAAGGACCTGAAGCAGTACCTGGATGACTG...AGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTCCACCTTAAGCCTTGGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACTGCCTTTGTAGACAGTaGCATAGGTACCCTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRKEALATGLKEGKSSPHCLCRQ*HRYPHP Trigger: TGGGTGAGGGTACCTATGCCACTGTCTACAAAGGCA...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | TACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTAGGCCACGGAGCAACTaGAACAGGAACAGTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YIQETVLGLPYPPRDWSVRPRSN*NRNSFT Trigger: TGTGAAACTGTTCCTGTTCCAGTTGCTCCGTGGCCT...AACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAATTGGGCCATGTCTCCTCAGTTaGGGTTCCCAAAATGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETVLGLPYPPRDWSVTIGPCLLS*GSQNAE Trigger: TTCCGCATTTTGGGAACCCCAACTGAGGAGACATGG...CCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGGGGAGCAAACCATACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCGAAAGGCCAGGCCTTTaGAGTCAAGAACACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EEGEQTIHPGDCPWPALPERPGL*SQEHSL Trigger: AAGAGAGTGTTCTTGACTCCAAAGGCCTGGCCTTTC...GGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | AGTGATGGTCAGGATCTGAATAGGGTCTGGGTCCCTACCTCTCAAAGGCTGGGACAAAGATGGGGCTATTaGGGGTCAGCTTCTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDGQDLNRVWVPTSQRLGQRWGY*GSASQG Trigger: ACCTTGAGAAGCTGACCCTCAATAGCCCCATCTTTG...TCCCAGCCTTTGAGAGGTAGGGACCCAGACCCTATTCAGATCCTGACCATCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGAAGGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGATGCGGAAGATGAAGTaGAGCTGTTCTTCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGRPSLSVETWHGHSVHQMRKMK*SCSSTV Trigger: CACAGTGGAAGAACAGCTGCACTTCATCTTCCGCAT...CTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCCTTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | AGTGATGGTCAGGATCTGAATAGGGTCTGGGTCCCTACCTCTCAAAGGCTGGGATGCCTTTGTAGACAGTaGCATAGGTACCCTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDGQDLNRVWVPTSQRLGCLCRQ*HRYPHP Trigger: TGGGTGAGGGTACCTATGCCACTGTCTACAAAGGCA...TCCCAGCCTTTGAGAGGTAGGGACCCAGACCCTATTCAGATCCTGACCATCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACAGAATGGATGTTTCCTaGCATCCTCAGCAGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RRKEALATGLKEGKSSPHRMDVS*HPQQRS Trigger: GGATCTCTGCTGAGGATGCCAGGAAACATCCATTCT...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GCTCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCGTGTCAGGAAGTTTGTaGATCCGCTCCCCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARTCPPACAHIIYGSSLSVSGSL*IRSPKL Trigger: CAGCTTGGGGGAGCGGATCCACAAACTTCCTGACAC...GCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | TACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTCTACAAGGTTGTCTGTaGGCTTGCTTTTGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YIQETVLGLPYPPRDWSVLQGCL*ACFCLC Trigger: ACAAAGGCAAAAGCAAGCTCACAGACAACCTTGTAG...AACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGCAACTACCCAAAATGCGGAAGATaGAGTGCAGCTGTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLALVWKPGMAILFTSNYPKCGR*SAAVLP Trigger: TGGAAGAACAGCTGCACTTCATCTTCCGCATTTTGG...GTAGTTGCTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGAACAGTTTCACATTGTaGATGTTGATGACATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LALPPRLRVPRLKVEEGENSFTL*MLMTFP Trigger: TGGAAATGTCATCAACATGCACAATGTGAAACTGTT...CTCCCCTTCCTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | GGACTAAAGGAGGGAAAAAGTAGCCCCCACCATGTCCATCTCCCAGTCTCTGGTCCATCTCATAGAAGATaGAGCCTACACCCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: GLKEGKSSPHHVHLPVSGPSHRR*SLHPTC Trigger: ACATGTGGGGTGTAGGCTGCATCTTCTATGAGATGG...ACCAGAGACTGGGAGATGGACATGGTGGGGGCTACTTTTTCCCTCCTTTAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GCTCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCGATGTGGCTGAAGCCTaGTCACTCTCCCCATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARTCPPACAHIIYGSSLSDVAEA*SLSPSD Trigger: ATCTGATGGGGAGAGTGACCAGGCTTCAGCCACATC...GCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GCTCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCCCATGTCTCCTCAGTTaGGGTTCCCAAAATGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARTCPPACAHIIYGSSLSPCLLS*GSQNAE Trigger: TTCCGCATTTTGGGAACCCCAACTGAGGAGACATGG...GCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGGCCATACTCAGGGAGTAGCGCCCAACCAGTCTGTATACAGAGATATTGCTCTGATCTCCTTAAGTaGTACAAGGTTGTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGPYSGSSAQPVCIQRYCSDLLK*YKVVCE Trigger: CTCACAGACAACCTTGTAGCACTTAAGGAGATCAGA...GCAATATCTCTGTATACAGACTGGTTGGGCGCTACTCCCTGAGTATGGCCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR TCA 90 bp | TCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCTGCCAAAATGCGGAAGATaGAGTGCAGCTGTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHMSPCLCTYYIWLLTKLPKCGR*SAAVLP Trigger: TGGAAGAACAGCTGCACTTCATCTTCCGCATTTTGG...CAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGGGGAGCAAACCATACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCAACAGTTTCACATTGTaGATGTTGATGACATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EEGEQTIHPGDCPWPALPNSFTL*MLMTFP Trigger: TGGAAATGTCATCAACATGCACAATGTGAAACTGTT...GGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GCTCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCAAGTGGACCGAATGTTaGCCTCCTTTTGTAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARTCPPACAHIIYGSSLSKWTEC*PPFVAV Trigger: TACAGCTACAAAAGGAGGCCAACATTCGGTCCACTT...GCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CCA 90 bp | GCTCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCAGGGACTTCTCTGTGTaGATAATGTCATGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARTCPPACAHIIYGSSLSRDFSV*IMSCSV Trigger: CACACTACATGACATTATCCACACAGAGAAGTCCCT...GCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| 3UTR CAA 72 bp | TTACAATTGGGCACAAGCTCGCACATGTCCCCCTGCTaGTGCACATATTATATATGGCTCCTCACTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQLGTSSHMSPC*CTYYIWLLTKL Trigger: CAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGCTTGTGCCCAATTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| CDS GCA 90 bp | GAAGCTCCCCAGGGGCAATACGGGTGGGAGCTTCTCCAAGGTCACTaGCACCACCGCCACCACTCTCATCCAGGCCTATCTGCTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EAPQGQYGWELLQGH*HHRHHSHPGLSAQG Trigger: TCCCTGAGCAGATAGGCCTGGATGAGAGTGGTGGCGGTGGTGGCAGTGACCTTGGAGAAGCTCCCACCCGTATTGCCCCTGGGGAGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
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| CDS GCA 90 bp | CCAAGGTCACTGCCACCACCGCCACCACTCTCATCCAGGCCTATCTaGTCAGGGACACCATTGGTCTTATCTATGCCTCGGCCCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRSLPPPPPLSSRPI*SGTPLVLSMPRPPR Trigger: CCGAGGGGGCCGAGGCATAGATAAGACCAATGGTGTCCCTGAGCAGATAGGCCTGGATGAGAGTGGTGGCGGTGGTGGCAGTGACCTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
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| CDS-3UTR CAA 90 bp | CAGAGCTGGGCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTGGTAGTGACAGGCGTTaGTTGATGTCCTCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSWAGEDPEKERGPGYGTGSDRR*LMSSVE Trigger: CTCCACTGAGGACATCAACAAACGCCTGTCACTACC...AGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGCCCAGCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| CDS-3UTR CAA 90 bp | CTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGGGTAGTGACAGGCGTTaGTTGATGTCCTCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LALPPRLRVPRLKVEEGEGSDRR*LMSSVE Trigger: CTCCACTGAGGACATCAACAAACGCCTGTCACTACC...CTCCCCTTCCTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| CDS CCA 90 bp | CACCGCCACCACTCTCATCCAGGCCTATCTGCTCAGGGACACCATTaGTCTTATCTATGCCTCGGCCCCCTCGGAGTGTCATTGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HRHHSHPGLSAQGHH*SYLCLGPLGVSLTA Trigger: AGCTGTCAATGACACTCCGAGGGGGCCGAGGCATAGATAAGACCAATGGTGTCCCTGAGCAGATAGGCCTGGATGAGAGTGGTGGCGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR CAA 90 bp | GCACCCTCCCTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGATTGACAGCTGCCGTTaGATCTTCTTCATCCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: APSLALPPRLRVPRLKVEIDSCR*IFFIRS Trigger: GGATCGGATGAAGAAGATCAAACGGCAGCTGTCAAT...CTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAGGGAGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS-3UTR CAA 90 bp | CAGGTAAGCAGGCAACAAGCAGGGAGGATTGCAGATGGGGGCTGCCCTGTAAGGGCCATGTCTCCTCAGTaGGGGTTCCCAAAATGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: QVSRQQAGRIADGGCPVRAMSPQ*GFPKCG Trigger: TCCGCATTTTGGGAACCCCAACTGAGGAGACATGGC...CCTTACAGGGCAGCCCCCATCTGCAATCCTCCCTGCTTGTTGCCTGCTTACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| CDS-3UTR CAA 90 bp | CAGGTAAGCAGGCAACAAGCAGGGAGGATTGCAGATGGGGGCTGCCCTGTAAGGTGCTCAGGGACACCATaGGTCTTATCTATGCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QVSRQQAGRIADGGCPVRCSGTP*VLSMPR Trigger: CCGAGGCATAGATAAGACCAATGGTGTCCCTGAGCA...CCTTACAGGGCAGCCCCCATCTGCAATCCTCCCTGCTTGTTGCCTGCTTACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
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| CDS-3UTR CAA 90 bp | GCACCCAGCAGACAGGCCAATGGTTGGGTTGACAGGCCAGGCCAGTGGTTTGGTACGATGTTGGCATGCTaGAGGTCCTTAAGCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: APSRQANGWVDRPGQWFGTMLAC*RSLSRD Trigger: ATCCCTGCTTAAGGACCTCAAGCATGCCAACATCGT...ACCAAACCACTGGCCTGGCCTGTCAACCCAACCATTGGCCTGTCTGCTGGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCTGGGCTGGGGAAGACCCTGAGAAGGAAAGAGGCCCTGGCTACGGGACTTGTAGTGTGACGATGTaGGCATGCTTGAGGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QSWAGEDPEKERGPGYGTCSVTM*ACLRSL Trigger: TAAGGACCTCAAGCATGCCAACATCGTCACACTACA...AGTCCCGTAGCCAGGGCCTCTTTCCTTCTCAGGGTCTTCCCCAGCCCAGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | GCACCCTCCCTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGAGTGTCACCACTTCGTaGGAGTATGTTTTAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: APSLALPPRLRVPRLKVESVTTS*EYVLVG Trigger: TCCTACTAAAACATACTCCAACGAAGTGGTGACACT...CTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAGGGAGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACTCAGCAGAGATCCGATaGCGACCCTCAAACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRKEALATGLKEGKSSPHSAEIR*RPSNCS Trigger: GCTGCAGTTTGAGGGTCGCAATCGGATCTCTGCTGA...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGAAGGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGGTAGTGTCAGGAAGTTaGTGGATCCGCTCCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGRPSLSVETWHGHSVHQVVSGS*WIRSPK Trigger: CTTGGGGGAGCGGATCCACAAACTTCCTGACACTAC...CTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCCTTCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS CCA 90 bp | ACTCTCACTGGAGACTGCACCTCATCTGAGGATGTGGCTGAAGCCTaGTCACTCTCCCCATCAGATCCCATCTTCATGTCCTCGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TLTGDCTSSEDVAEA*SLSPSDPIFMSSCT Trigger: TGTGCACGAGGACATGAAGATGGGATCTGATGGGGAGAGTGACCAGGCTTCAGCCACATCCTCAGATGAGGTGCAGTCTCCAGTGAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGGCCATACTCAGGGAGTAGCGCCCAACCAGTCTGTATACAGAGATATTGCTCAGCAGAGATCCGATaGCGACCCTCAAACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGPYSGSSAQPVCIQRYCSAEIR*RPSNCS Trigger: GCTGCAGTTTGAGGGTCGCAATCGGATCTCTGCTGA...GCAATATCTCTGTATACAGACTGGTTGGGCGCTACTCCCTGAGTATGGCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGCAACTACGTAGTGTCAGGAAGTTaGTGGATCCGCTCCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLALVWKPGMAILFTSNYVVSGS*WIRSPK Trigger: CTTGGGGGAGCGGATCCACAAACTTCCTGACACTAC...GTAGTTGCTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGGAAAGAGGCCCTGGCTACGGGACTAAAGGAGGGAAAAAGTAGCCCCCACTCAAAGATGGGGCTATaGAGGGTCAGCTTCTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRKEALATGLKEGKSSPHSKMGL*RVSFSR Trigger: CCTTGAGAAGCTGACCCTCAATAGCCCCATCTTTGA...GTGGGGGCTACTTTTTCCCTCCTTTAGTCCCGTAGCCAGGGCCTCTTTCCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAAACGATGTTGGCATGCTaGAGGTCCTTAAGCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRRLSLACLTLLGTGVLQTMLAC*RSLSRD Trigger: ATCCCTGCTTAAGGACCTCAAGCATGCCAACATCGT...TTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | GCACCCTCCCTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGAGGAACAGTTTCACATaGTGCATGTTGATGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: APSLALPPRLRVPRLKVERNSFT*CMLMTF Trigger: AAATGTCATCAACATGCACAATGTGAAACTGTTCCT...CTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAGGGAGGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGCAAACCATACATCCAGGAGACTGAAGTGGACCGAATGTaGGCCTCCTTTTGTAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSQGLRWRKGSKPYIQETEVDRM*ASFCSC Trigger: ACAGCTACAAAAGGAGGCCAACATTCGGTCCACTTC...AGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTCCACCTTAAGCCTTGGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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| CDS-3UTR CAA 90 bp | GAGACTGTCCTTGGCCTGCCTTACCCTCCTAGGGACTGGAGTGTTACAATTGGGTGTAGTGTGACGATGTaGGCATGCTTGAGGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ETVLGLPYPPRDWSVTIGCSVTM*ACLRSL Trigger: TAAGGACCTCAAGCATGCCAACATCGTCACACTACA...CCCAATTGTAACACTCCAGTCCCTAGGAGGGTAAGGCAGGCCAAGGACAGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | CTTGCCCTCCCACCCCGCTTAAGGGTCCCAAGGCTTAAGGTGGAGGAAGGGGAGAGGAACAGTTTCACATaGTGCATGTTGATGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: LALPPRLRVPRLKVEEGERNSFT*CMLMTF Trigger: AAATGTCATCAACATGCACAATGTGAAACTGTTCCT...CTCCCCTTCCTCCACCTTAAGCCTTGGGACCCTTAAGCGGGGTGGGAGGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | GCTCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCGCCATGTCTCCTCAGTaGGGGTTCCCAAAATGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARTCPPACAHIIYGSSLSAMSPQ*GFPKCG Trigger: TCCGCATTTTGGGAACCCCAACTGAGGAGACATGGC...GCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGGGGAGCAAACCATACATCCAGGAGACTGTCCTTGGCCTGCCTTACCCTTAAGTGCTACAAGGTaGTCTGTGAGCTTGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: EEGEQTIHPGDCPWPALPLSATR*SVSLLL Trigger: CAAAAGCAAGCTCACAGACAACCTTGTAGCACTTAA...GGGTAAGGCAGGCCAAGGACAGTCTCCTGGATGTATGGTTTGCTCCCCTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGAAGGCCTAGCCTTAGTGTGGAAACCTGGCATGGCCATTCTGTTCACCAGTTAAGTGCTACAAGGTaGTCTGTGAGCTTGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGRPSLSVETWHGHSVHQLSATR*SVSLLL Trigger: CAAAAGCAAGCTCACAGACAACCTTGTAGCACTTAA...CTGGTGAACAGAATGGCCATGCCAGGTTTCCACACTAAGGCTAGGCCTTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | GCTCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCGAAGTGGACCGAATGTaGGCCTCCTTTTGTAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ARTCPPACAHIIYGSSLSEVDRM*ASFCSC Trigger: ACAGCTACAAAAGGAGGCCAACATTCGGTCCACTTC...GCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS GCA 90 bp | AGTACAGGGTGCCCCTTCTTCGTGTTCCAGTCTGATCTCCTTAAGTaGTACAAGGTTGTCTGTGAGCTTGCTTTTGCCTTTGTAGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: STGCPFFVFQSDLLK*YKVVCELAFAFVDS Trigger: ACTGTCTACAAAGGCAAAAGCAAGCTCACAGACAACCTTGTAGCACTTAAGGAGATCAGACTGGAACACGAAGAAGGGGCACCCTGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS-3UTR CAA 90 bp | TCGCACATGTCCCCCTGCTTGTGCACATATTATATATGGCTCCTCACTAAGCTGAGTGTCACCACTTCGTaGGAGTATGTTTTAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SHMSPCLCTYYIWLLTKLSVTTS*EYVLVG Trigger: TCCTACTAAAACATACTCCAACGAAGTGGTGACACT...CAGCTTAGTGAGGAGCCATATATAATATGTGCACAAGCAGGGGGACATGTGCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS CCA 72 bp | CCCGAACAGAGCGAAGCTCCCCAGGGGCAATACGGGTaGGAGCTTCTCCAAGGTCACTGCCACCACCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PEQSEAPQGQYG*ELLQGHCHHRH Trigger: GTGGCGGTGGTGGCAGTGACCTTGGAGAAGCTCCCACCCGTATTGCCCCTGGGGAGCTTCGCTCTGTTCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS CAA 90 bp | CCACCGCCACCACTCTCATCCAGGCCTATCTGCTCAGGGACACCATaGGTCTTATCTATGCCTCGGCCCCCTCGGAGTGTCATTGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPPPLSSRPICSGTP*VLSMPRPPRSVIDS Trigger: GCTGTCAATGACACTCCGAGGGGGCCGAGGCATAGATAAGACCAATGGTGTCCCTGAGCAGATAGGCCTGGATGAGAGTGGTGGCGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS GCA 72 bp | GGCCTATCTGCTCAGGGACACCATTGGTCTTATCTATaGCTCGGCCCCCTCGGAGTGTCATTGACAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLSAQGHHWSYL*LGPLGVSLTAA Trigger: GGCAGCTGTCAATGACACTCCGAGGGGGCCGAGGCATAGATAAGACCAATGGTGTCCCTGAGCAGATAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS GCA 72 bp | CTGCCACCACCGCCACCACTCTCATCCAGGCCTATCTaGTCAGGGACACCATTGGTCTTATCTATGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LPPPPPLSSRPI*SGTPLVLSMPR Trigger: CCGAGGCATAGATAAGACCAATGGTGTCCCTGAGCAGATAGGCCTGGATGAGAGTGGTGGCGGTGGTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS CCA 72 bp | CAGGCGTTTGTTGATGTCCTCAGTGGAGATCTTGCGTaGGGGGTGGTTGCGCATGCGCACTCTCACTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QAFVDVLSGDLA*GVVAHAHSHWR Trigger: TCTCCAGTGAGAGTGCGCATGCGCAACCACCCCCCACGCAAGATCTCCACTGAGGACATCAACAAACGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS CAA 72 bp | CCACTCTCATCCAGGCCTATCTGCTCAGGGACACCATaGGTCTTATCTATGCCTCGGCCCCCTCGGAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PLSSRPICSGTP*VLSMPRPPRSV Trigger: GACACTCCGAGGGGGCCGAGGCATAGATAAGACCAATGGTGTCCCTGAGCAGATAGGCCTGGATGAGAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS CCA 72 bp | CACTCTCATCCAGGCCTATCTGCTCAGGGACACCATTaGTCTTATCTATGCCTCGGCCCCCTCGGAGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: HSHPGLSAQGHH*SYLCLGPLGVS Trigger: TGACACTCCGAGGGGGCCGAGGCATAGATAAGACCAATGGTGTCCCTGAGCAGATAGGCCTGGATGAGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS TCA 72 bp | GGTCTTATCTATGCCTCGGCCCCCTCGGAGTGTCATTaGCAGCTGCCGTTTGATCTTCTTCATCCGATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GLIYASAPSECH*QLPFDLLHPIH Trigger: ATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGGGGCCGAGGCATAGATAAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033380.7 |
||
| CDS TCA 72 bp | ATGTCTCCTCAGTTGGGGTTCCCAAAATGCGGAAGATaGAGTGCAGCTGTTCTTCCACTGTGGAGCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: MSPQLGFPKCGR*SAAVLPLWSLG Trigger: TCCCAGGCTCCACAGTGGAAGAACAGCTGCACTTCATCTTCCGCATTTTGGGAACCCCAACTGAGGAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS CCA 72 bp | CTCATTGGACAGGATACCTGGCCATGTCTCCTCAGTTaGGGTTCCCAAAATGCGGAAGATGAAGTGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LIGQDTWPCLLS*GSQNAEDEVQL Trigger: CAGCTGCACTTCATCTTCCGCATTTTGGGAACCCCAACTGAGGAGACATGGCCAGGTATCCTGTCCAATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS CAA 72 bp | GGCCTGCCTGAGTCAGGCATAGAAGTGGACCGAATGTaGGCCTCCTTTTGTAGCTGTACCTCCTTTAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLPESGIEVDRM*ASFCSCTSFSA Trigger: TGCACTAAAGGAGGTACAGCTACAAAAGGAGGCCAACATTCGGTCCACTTCTATGCCTGACTCAGGCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS GCA 72 bp | CTTAAGCAGGGATACTTCCCGGATAGCAGTACAGGGTaGCCCTTCTTCGTGTTCCAGTCTGATCTCCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LKQGYFPDSSTG*PFFVFQSDLLK Trigger: CTTAAGGAGATCAGACTGGAACACGAAGAAGGGGCACCCTGTACTGCTATCCGGGAAGTATCCCTGCTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS CAA 90 bp | CGGAAAGCTGGCCTGCCTGAGTCAGGCATAGAAGTGGACCGAATGTaGGCCTCCTTTTGTAGCTGTACCTCCTTTAGTGCAAATATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RKAGLPESGIEVDRM*ASFCSCTSFSANME Trigger: TTCCATATTTGCACTAAAGGAGGTACAGCTACAAAAGGAGGCCAACATTCGGTCCACTTCTATGCCTGACTCAGGCAGGCCAGCTTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS GCA 72 bp | TGCCCCTTCTTCGTGTTCCAGTCTGATCTCCTTAAGTaGTACAAGGTTGTCTGTGAGCTTGCTTTTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: CPFFVFQSDLLK*YKVVCELAFAF Trigger: AAAGGCAAAAGCAAGCTCACAGACAACCTTGTAGCACTTAAGGAGATCAGACTGGAACACGAAGAAGGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
||
| CDS GCA 72 bp | GTGTGGATAATGTCATGTAGTGTGACGATGTTGGCATaGTTGAGGTCCTTAAGCAGGGATACTTCCCGGATA | + |
|
Preference number: 6 (lower is better) Translates to: VWIMSCSVTMLA*LRSLSRDTSRI Trigger: TATCCGGGAAGTATCCCTGCTTAAGGACCTCAAGCATGCCAACATCGTCACACTACATGACATTATCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033380.7 ENSMUST00000115364.8 |
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