Pregenerated sensors for CDK10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033862Ensembl transcript IDs: ENSMUST00000036880.8, ENSMUST00000212028.2, ENSMUST00000212193.2, ENSMUST00000212361.2, ENSMUST00000213005.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGGGGTGGGCTGGATCCAGGCTCAGGGCCGGCATCGTTTGCTCTaGCCTTCAGCGGCAGCTGGGGCAGCACGCTTATTGCGGTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: GGVGWIQAQGRHRLL*PSAAAGAARLLRWW Trigger: CCACCACCGCAATAAGCGTGCTGCCCCAGCTGCCGCTGAAGGGCAGAGCAAACGATGCCGGCCCTGAGCCTGGATCCAGCCCACCCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR TCA 90 bp | AGCCAAAGGCCTGCTGGGGCCTCCCAGTCGTCGGCTGATGATCCGTaGGGATGTGGAGGGGTGGGCTGGATCCAGGCTCAGGGCCGGCAT | + |
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Preference number: 1 (lower is better) Translates to: SQRPAGASQSSADDP*GCGGVGWIQAQGRH Trigger: ATGCCGGCCCTGAGCCTGGATCCAGCCCACCCCTCCACATCCTCACGGATCATCAGCCGACGACTGGGAGGCCCCAGCAGGCCTTTGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR GCA 90 bp | GATGTGGAGGGGTGGGCTGGATCCAGGCTCAGGGCCGGCATCGTTTaGTCTGCCCTTCAGCGGCAGCTGGGGCAGCACGCTTATTGCGGT | + |
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Preference number: 1 (lower is better) Translates to: DVEGWAGSRLRAGIV*SALQRQLGQHAYCG Trigger: ACCGCAATAAGCGTGCTGCCCCAGCTGCCGCTGAAGGGCAGAGCAAACGATGCCGGCCCTGAGCCTGGATCCAGCCCACCCCTCCACATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR CCA 90 bp | CCAGGCTCAGGGCCGGCATCGTTTGCTCTGCCCTTCAGCGGCAGCTaGGGCAGCACGCTTATTGCGGTGGTGGGGGAAGGTAGGCATGAG | + |
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Preference number: 1 (lower is better) Translates to: PGSGPASFALPFSGS*GSTLIAVVGEGRHE Trigger: CTCATGCCTACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCCAGCTGCCGCTGAAGGGCAGAGCAAACGATGCCGGCCCTGAGCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR GCA 90 bp | CTTCAGGGCTGGCCTGGAGCTGGAGAAGGGGCTCCTGGTGGGGCGTaGTCCAGGTCTAGACAGGACTCCTCACTTAAGCTGGCCCTGACC | + |
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Preference number: 1 (lower is better) Translates to: LQGWPGAGEGAPGGA*SRSRQDSSLKLALT Trigger: GGTCAGGGCCAGCTTAAGTGAGGAGTCCTGTCTAGACCTGGAGCACGCCCCACCAGGAGCCCCTTCTCCAGCTCCAGGCCAGCCCTGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR TCA 90 bp | GGGCGTGCTCCAGGTCTAGACAGGACTCCTCACTTAAGCTGGCCCTaGCCCGTCTCTCCCTTTCTTCTCCCCTGTGGGGCCTGTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: GRAPGLDRTPHLSWP*PVSPFLLPCGACGP Trigger: GGGACCACAGGCCCCACAGGGGAGAAGAAAGGGAGAGACGGGTCAGGGCCAGCTTAAGTGAGGAGTCCTGTCTAGACCTGGAGCACGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR CCA 90 bp | CTCTGCCCTTCAGCGGCAGCTGGGGCAGCACGCTTATTGCGGTGGTaGGGGAAGGTAGGCATGAGCTCCGGTTCACAGGCTGCAGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: LCPSAAAGAARLLRW*GKVGMSSGSQAAGE Trigger: TTCTCCTGCAGCCTGTGAACCGGAGCTCATGCCTACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCCAGCTGCCGCTGAAGGGCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR CCA 90 bp | TTGCTCTGCCCTTCAGCGGCAGCTGGGGCAGCACGCTTATTGCGGTaGTGGGGGAAGGTAGGCATGAGCTCCGGTTCACAGGCTGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LLCPSAAAGAARLLR*WGKVGMSSGSQAAG Trigger: TCCTGCAGCCTGTGAACCGGAGCTCATGCCTACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCCAGCTGCCGCTGAAGGGCAGAGCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR TCA 90 bp | GAGGCAGGGGCTAGAGCGACAGGGCCACCAGGCATGGACAGGGACTaGGGGTTGTCGGTAACACCCACCGGCCAGATATTCTCACTCGGT | + |
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Preference number: 1 (lower is better) Translates to: EAGARATGPPGMDRD*GLSVTPTGQIFSLG Trigger: ACCGAGTGAGAATATCTGGCCGGTGGGTGTTACCGACAACCCTCAGTCCCTGTCCATGCCTGGTGGCCCTGTCGCTCTAGCCCCTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR GCA 90 bp | AAGTGCCAGGGAGGAGGGGCTTATGGGCCAGCAGCTCTGCCAGGATaGAGCCGACAGCCCTGTAGAAGCAGCCGACCTCCACTTAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: KCQGGGAYGPAALPG*SRQPCRSSRPPLSN Trigger: GTTGCTAAGTGGAGGTCGGCTGCTTCTACAGGGCTGTCGGCTGCATCCTGGCAGAGCTGCTGGCCCATAAGCCCCTCCTCCCTGGCACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR TCA 90 bp | ATCCTGCTCCCCCTGACCAGGGCTGACCTCCAGGGCCAGAAGACTTaGGGCCCTGGGAGCAGAAACCACGCCTACCACATGTCAATGCTG | + |
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Preference number: 1 (lower is better) Translates to: ILLPLTRADLQGQKT*GPGSRNHAYHMSML Trigger: CAGCATTGACATGTGGTAGGCGTGGTTTCTGCTCCCAGGGCCTCAAGTCTTCTGGCCCTGGAGGTCAGCCCTGGTCAGGGGGAGCAGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR CCA 90 bp | GACAAGACAGGCCACCAGATGGTGCTACAACTGCCCAGTCTATCCTaGGTACCCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: DKTGHQMVLQLPSLS*VPHSATSLSTNPLC Trigger: GCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTTGTAGCACCATCTGGTGGCCTGTCTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
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| 3UTR CCA 90 bp | TTCTCACTCGGTGTCCCCAACAGCTGTACAATCAAGTCGATCTGGTaGATCTCGGAAGTGCCAGGGAGGAGGGGCTTATGGGCCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: FSLGVPNSCTIKSIW*ISEVPGRRGLWASS Trigger: GCTGCTGGCCCATAAGCCCCTCCTCCCTGGCACTTCCGAGATCCACCAGATCGACTTGATTGTACAGCTGTTGGGGACACCGAGTGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR GCA 90 bp | TCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTaGATCTGGACAGAGGGAAATATCAGGGAGGAGTCAGCCAACTGG | + |
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Preference number: 1 (lower is better) Translates to: SWVPHSATSLSTNPL*IWTEGNIREESANW Trigger: CCAGTTGGCTGACTCCTCCCTGATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
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| 3UTR CCA 90 bp | GTACCCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTaGACAGAGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: VPHSATSLSTNPLCI*TEGNIREESANWRS Trigger: GCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
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| 3UTR CCA 90 bp | ATATTCTCACTCGGTGTCCCCAACAGCTGTACAATCAAGTCGATCTaGTGGATCTCGGAAGTGCCAGGGAGGAGGGGCTTATGGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: IFSLGVPNSCTIKSI*WISEVPGRRGLWAS Trigger: GCTGGCCCATAAGCCCCTCCTCCCTGGCACTTCCGAGATCCACCAGATCGACTTGATTGTACAGCTGTTGGGGACACCGAGTGAGAATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR GCA 90 bp | AGGCTTTTTATCTCTCAGTCCACCAATCCTCTCCTTGGGCACCAGTaGCAGCCGCGTCCACCAAGGGCTTCCATTCTGACAGTCTTACAA | + |
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Preference number: 1 (lower is better) Translates to: RLFISQSTNPLLGHQ*QPRPPRASILTVLQ Trigger: TTGTAAGACTGTCAGAATGGAAGCCCTTGGTGGACGCGGCTGGCACTGGTGCCCAAGGAGAGGATTGGTGGACTGAGAGATAAAAAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
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| 3UTR TCA 90 bp | GACACCTTCAGGTCCCTGTGGATGATGAAGTTCCTGTGCAGGTACTaGAGGCCACGAAGCACCTGTAGCATGATGCATTTAACCTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: DTFRSLWMMKFLCRY*RPRSTCSMMHLTCA Trigger: TGCACAGGTTAAATGCATCATGCTACAGGTGCTTCGTGGCCTTCAGTACCTGCACAGGAACTTCATCATCCACAGGGACCTGAAGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
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| 3UTR CCA 90 bp | CCACTCAAACTAGACATCTGGCACCTATGGGTGTCTGGGTATGTCTaGGAAGTGGGTATCTATGGTCTGTGTTGTGAGAAACCATCTTTA | + |
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Preference number: 1 (lower is better) Translates to: PLKLDIWHLWVSGYV*EVGIYGLCCEKPSL Trigger: TAAAGATGGTTTCTCACAACACAGACCATAGATACCCACTTCCCAGACATACCCAGACACCCATAGGTGCCAGATGTCTAGTTTGAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR TCA 90 bp | GGTGTCTGGGTATGTCTGGGAAGTGGGTATCTATGGTCTGTGTTGTaGGAAACCATCTTTAAAAGGTTTGTTGAATTGAGATGGCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: GVWVCLGSGYLWSVL*ETIFKRFVELRWLS Trigger: ACTGAGCCATCTCAATTCAACAAACCTTTTAAAGATGGTTTCTCACAACACAGACCATAGATACCCACTTCCCAGACATACCCAGACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR TCA 90 bp | TATGGTCTGTGTTGTGAGAAACCATCTTTAAAAGGTTTGTTGAATTaGGATGGCTCAGTGCTACATTGCTCACTTAGTGTGTGCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: YGLCCEKPSLKGLLN*DGSVLHCSLSVCRE Trigger: TTCCCTGCACACACTAAGTGAGCAATGTAGCACTGAGCCATCTCAATTCAACAAACCTTTTAAAGATGGTTTCTCACAACACAGACCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCAGGGCCGGCATCGTTTGCTCTGCCCTTCAGCGGCAGCTGGGGCAGCACGCAGGGCCAGAAGACTTaGGGCCCTGGGAGCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: GSGPASFALPFSGSWGSTQGQKT*GPGSRN Trigger: GTTTCTGCTCCCAGGGCCTCAAGTCTTCTGGCCCTG...CGTGCTGCCCCAGCTGCCGCTGAAGGGCAGAGCAAACGATGCCGGCCCTGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCAGCGGCAGCTGGGGCAGCACGCTTATTGCGGTGGTGGGGGAAGGTAGGCGGGAGGAGGGGCTTATaGGCCAGCAGCTCTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PSAAAGAARLLRWWGKVGGRRGL*ASSSAR Trigger: CCTGGCAGAGCTGCTGGCCCATAAGCCCCTCCTCCC...GCCTACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCCAGCTGCCGCTGAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR-3UTR GCA 90 bp | AGCGGCAGCTGGGGCAGCACGCTTATTGCGGTGGTGGGGGAAGGTAGGCATGAGCTCCTTGGGCACCAGTaGCAGCCGCGTCCACCAAGG | + |
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Preference number: 2 (lower is better) Translates to: SGSWGSTLIAVVGEGRHELLGHQ*QPRPPR Trigger: CCTTGGTGGACGCGGCTGGCACTGGTGCCCAAGGAG...CTCATGCCTACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCCAGCTGCCGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCTGTTTCCTCAAGCTGTACTGGCCGGCCAGCGGCAGCTTGGAGAAACCCGGAGGAGCCAAAGGCCTaGTGGGGCCTCCCAGTCGTC | + |
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Preference number: 2 (lower is better) Translates to: RAVSSSCTGRPAAAWRNPEEPKA*WGLPVV Trigger: GACGACTGGGAGGCCCCAGCAGGCCTTTGGCTCCTC...CGGGTTTCTCCAAGCTGCCGCTGGCCGGCCAGTACAGCTTGAGGAAACAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCAGGCAGTCTCCCGAGGTTGCCCTGGGGAATGATAGTGACCTTGGCCTTGAGCCAAAGGCCTGCTaGGGCCTCCCAGTCGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: LSRQSPEVALGNDSDLGLEPKAC*GLPVVG Trigger: GCCGACGACTGGGAGGCCCCAGCAGGCCTTTGGCTC...AAGGCCAAGGTCACTATCATTCCCCAGGGCAACCTCGGGAGACTGCCTGGAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGCAGAGCCAAAGGCCTGCTaGGGCCTCCCAGTCGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: VYPGYPTQPHPCPQIPSAEPKAC*GLPVVG Trigger: GCCGACGACTGGGAGGCCCCAGCAGGCCTTTGGCTC...TGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGAGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAAAGGCCTGCGAGCCAAAGGCCTGCTaGGGCCTCCCAGTCGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: DRGKYQGGVSQLEEPKACEPKAC*GLPVVG Trigger: GCCGACGACTGGGAGGCCCCAGCAGGCCTTTGGCTC...GCAGGCCTTTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCTCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAGGGAGGAGGGGCTTATaGGCCAGCAGCTCTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PHSATSLSTNPLCIWTEGGRRGL*ASSSAR Trigger: CCTGGCAGAGCTGCTGGCCCATAAGCCCCTCCTCCC...TCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGCAGAGGAGCCAAAGGCCTaGTGGGGCCTCCCAGTCGTC | + |
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Preference number: 2 (lower is better) Translates to: VYPGYPTQPHPCPQIPSAEEPKA*WGLPVV Trigger: GACGACTGGGAGGCCCCAGCAGGCCTTTGGCTCCTC...TGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
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| 3UTR-3UTR GCA 90 bp | CCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAGAGGAGCCAAAGGCCTaGTGGGGCCTCCCAGTCGTC | + |
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Preference number: 2 (lower is better) Translates to: PTQPHPCPQIPSASGQREEEPKA*WGLPVV Trigger: GACGACTGGGAGGCCCCAGCAGGCCTTTGGCTCCTC...TTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
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| 3UTR-3UTR CCA 90 bp | CAACTGCCCAGTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAAATGAGCCAAAGGCCTGCTaGGGCCTCCCAGTCGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: QLPSLSWVPHSATSLSTNEPKAC*GLPVVG Trigger: GCCGACGACTGGGAGGCCCCAGCAGGCCTTTGGCTC...ATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGAAGAGTTATCTCCCAGGCCTACTCATTCCAGGCTAGTGCCCAGCTCCAGTCCCCCTGACCAGGGCTaGCCTCCAGGGCCAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: QEELSPRPTHSRLVPSSSPPDQG*PPGPED Trigger: GTCTTCTGGCCCTGGAGGTCAGCCCTGGTCAGGGGG...ACTGGAGCTGGGCACTAGCCTGGAATGAGTAGGCCTGGGAGATAACTCTTCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR-3UTR TCA 90 bp | TACAAGTATCCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACAGGGCCCTGTCCTCCTaGGGGGCAGGGCTGCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: YKYPTPVNQPLLPPARGHRALSS*GAGLPK Trigger: TTTAGGCAGCCCTGCCCCTCAGGAGGACAGGGCCCT...GTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACTTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR-3UTR CCA 90 bp | TACAAGTATCCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACGGGCAGCTTCAGGGCTaGCCTGGAGCTGGAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: YKYPTPVNQPLLPPARGHGQLQG*PGAGEG Trigger: CCCTTCTCCAGCTCCAGGCCAGCCCTGAAGCTGCCC...GTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACTTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTGTTATAGGGCTGTTTCCTCAAGCTGTACTGGCCGGCCAGCGGCAGCTTGGCCAGCCATGTTCTCGTaGTCCCCCTCCTTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: GCYRAVSSSCTGRPAAAWPAMFS*SPSLDA Trigger: AGCATCCAAGGAGGGGGAGCACGAGAACATGGCTGG...CCAAGCTGCCGCTGGCCGGCCAGTACAGCTTGAGGAAACAGCCCTATAACAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCAAGAAGAGTTATCTCCCAGGCCTACTCATTCCAGGCTAGTGCCCAGCTCCATGGGCCAGCAGCTCTaGCAGGATGCAGCCGACAGC | + |
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Preference number: 2 (lower is better) Translates to: LQEELSPRPTHSRLVPSSMGQQL*QDAADS Trigger: GCTGTCGGCTGCATCCTGGCAGAGCTGCTGGCCCAT...GGAGCTGGGCACTAGCCTGGAATGAGTAGGCCTGGGAGATAACTCTTCTTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGCTGGATCCAGGCTCAGGGCCGGCATCGTTTGCTCTGCCCTTCAGCGGCAACAATCAAGTCGATCTaGTGGATCTCGGAAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VGWIQAQGRHRLLCPSAATIKSI*WISEVP Trigger: TGGCACTTCCGAGATCCACCAGATCGACTTGATTGT...TGCCGCTGAAGGGCAGAGCAAACGATGCCGGCCCTGAGCCTGGATCCAGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR-3UTR CCA 90 bp | CATCGTTTGCTCTGCCCTTCAGCGGCAGCTGGGGCAGCACGCTTATTGCGGTGGGTGTCTGGGTATGTCTaGGAAGTGGGTATCTATGGT | + |
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Preference number: 2 (lower is better) Translates to: HRLLCPSAAAGAARLLRWVSGYV*EVGIYG Trigger: ACCATAGATACCCACTTCCCAGACATACCCAGACAC...CCACCGCAATAAGCGTGCTGCCCCAGCTGCCGCTGAAGGGCAGAGCAAACGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTTTTTATCTCTCAGTCCACCAATCCTCTCCTTGGGCACCAGTGCCAGCCGGTGGATCTCGGAAGTaGCAGGGAGGAGGGGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: KAFYLSVHQSSPWAPVPAGGSRK*QGGGAY Trigger: ATAAGCCCCTCCTCCCTGGCACTTCCGAGATCCACC...GGCTGGCACTGGTGCCCAAGGAGAGGATTGGTGGACTGAGAGATAAAAAGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTACAACTGCCCAGTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCAGTCATTGGCTTTACTaGAACACCATAGGCCCGAGC | + |
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Preference number: 2 (lower is better) Translates to: GATTAQSILGTPLSHIPVSHWLY*NTIGPS Trigger: GCTCGGGCCTATGGTGTTCCAGTAAAGCCAATGACT...GACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTTGTAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCTGTACTGGCCGGCCAGCGGCAGCTTGGAGAAACCCGGCCAGATATTCTACCTTCAGGTCCCTGTaGATGATGAAGTTCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SSCTGRPAAAWRNPARYSTFRSL*MMKFLC Trigger: GCACAGGAACTTCATCATCCACAGGGACCTGAAGGT...AGAATATCTGGCCGGGTTTCTCCAAGCTGCCGCTGGCCGGCCAGTACAGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAAAGGCCTGCTGGGACGGGAACTTGTGCTTaGGGTTGTTATAGGGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: EGNIREESANWRSQRPAGTGTCA*GCYRAV Trigger: AACAGCCCTATAACAACCTCAAGCACAAGTTCCCGT...CCCAGCAGGCCTTTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGATCCACAAATCCCCTCTaGATCTGGACAGAGGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PHSATSLSTNPLCIWTEGSTNPL*IWTEGN Trigger: ATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGA...TCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGGAAGGTAGGCATGAGCTCCGGTTCACAGGGCAGGGGCTTCTCCTTGAAGTATCCACAAATCCCCTCTaGATCTGGACAGAGGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: GEGRHELRFTGQGLLLEVSTNPL*IWTEGN Trigger: ATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGA...TACTTCAAGGAGAAGCCCCTGCCCTGTGAACCGGAGCTCATGCCTACCTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGATATTCTCACTCGGTGTCCCCAACAGCTGTACAATCAAGTCGATCTGGTCGTGCTCCCCCTCCTTaGATGCTGCAGTCAGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ARYSHSVSPTAVQSSRSGRAPPP*MLQSGS Trigger: AGAGCCTGACTGCAGCATCCAAGGAGGGGGAGCACG...ACCAGATCGACTTGATTGTACAGCTGTTGGGGACACCGAGTGAGAATATCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR CAA 90 bp | AGGCAAGGTCTGTACCTTTTCTTAGGGTCATACATGAAGAGGAAGTaGAGCAGACGGAGTCCGGCCTCTGAGAGCCACGGGAACTTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RQGLYLFLGSYMKRK*SRRSPASESHGNLC Trigger: GCACAAGTTCCCGTGGCTCTCAGAGGCCGGACTCCGTCTGCTCAACTTCCTCTTCATGTATGACCCTAAGAAAAGGTACAGACCTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAGTTGAGCAGACGGAGTCCGGCCTCTGAGAGCCACGGGAACTTGTGCTTGCAAGGGCTTCCATTCTaGCAGTCTTACAAGTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: RKLSRRSPASESHGNLCLQGLPF*QSYKYP Trigger: AGGATACTTGTAAGACTGTCAGAATGGAAGCCCTTG...CAAGCACAAGTTCCCGTGGCTCTCAGAGGCCGGACTCCGTCTGCTCAACTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAAAGGCCTGCTGGGCAAGGGCTTCCATTCTaGCAGTCTTACAAGTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: EGNIREESANWRSQRPAGQGLPF*QSYKYP Trigger: AGGATACTTGTAAGACTGTCAGAATGGAAGCCCTTG...CCCAGCAGGCCTTTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR-3UTR CCA 90 bp | CTATCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCAATCCCCTCTGCATCTaGACAGAGGGAAATATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LSWVPHSATSLSTNPLCINPLCI*TEGNIR Trigger: CCTGATATTTCCCTCTGTCCAGATGCAGAGGGGATT...GATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCGAGAAGGGTGTTGGCATATTTTCCAATAGGCTGGCCAGATCTTGTTCGCAAGATGCTCTCCAGGTaGTTGCCCACAACCACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PPRRVLAYFPIGWPDLVRKMLSR*LPTTTS Trigger: GGAGGTGGTTGTGGGCAACCACCTGGAGAGCATCTT...GCGAACAAGATCTGGCCAGCCTATTGGAAAATATGCCAACACCCTTCTCGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212028.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCAACAGCTGTACAATCAAGTCGATCTGGTGGATCTCGGAAGTGCCAGGGAGAGTCATTGGCTTTACTaGAACACCATAGGCCCGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PQQLYNQVDLVDLGSARESHWLY*NTIGPS Trigger: GCTCGGGCCTATGGTGTTCCAGTAAAGCCAATGACT...CTCCCTGGCACTTCCGAGATCCACCAGATCGACTTGATTGTACAGCTGTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCAAGAAGAGTTATCTCCCAGGCCTACTCATTCCAGGCTAGTGCCCAGCTCCCAAGGGCTTCCATTCTaGCAGTCTTACAAGTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: LQEELSPRPTHSRLVPSSQGLPF*QSYKYP Trigger: AGGATACTTGTAAGACTGTCAGAATGGAAGCCCTTG...GGAGCTGGGCACTAGCCTGGAATGAGTAGGCCTGGGAGATAACTCTTCTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTTGCCCTGGGGAATGATAGTGACCTTGGCCTTAGAGAGGCCTATTTCACTCGAGACCAGAAAAAGTaGATCATGGATTTGGGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: EVALGNDSDLGLREAYFTRDQKK*IMDLGL Trigger: TAAACCCAAATCCATGATGCACTTTTTCTGGTCTCG...AGTGAAATAGGCCTCTCTAAGGCCAAGGTCACTATCATTCCCCAGGGCAACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR GCA 72 bp | GGGTGGGCTGGATCCAGGCTCAGGGCCGGCATCGTTTaGTCTGCCCTTCAGCGGCAGCTGGGGCAGCACGCT | + |
|
Preference number: 3 (lower is better) Translates to: GWAGSRLRAGIV*SALQRQLGQHA Trigger: AGCGTGCTGCCCCAGCTGCCGCTGAAGGGCAGAGCAAACGATGCCGGCCCTGAGCCTGGATCCAGCCCACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR CCA 72 bp | TCAGCGGCAGCTGGGGCAGCACGCTTATTGCGGTGGTaGGGGAAGGTAGGCATGAGCTCCGGTTCACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SAAAGAARLLRW*GKVGMSSGSQG Trigger: GCCCTGTGAACCGGAGCTCATGCCTACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCCAGCTGCCGCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
||
| 3UTR TCA 72 bp | CTCTACCACACCAATCCTGCTCCCCCTGACCAGGGCTaGCCTCCAGGGCCAGAAGACTTGAGGCCCTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LYHTNPAPPDQG*PPGPEDLRPWE Trigger: CTCCCAGGGCCTCAAGTCTTCTGGCCCTGGAGGTCAGCCCTGGTCAGGGGGAGCAGGATTGGTGTGGTAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR GCA 72 bp | AGGCCGGAGCCAGTGAGCACCCCAGCCATGTTCTCGTaGTCCCCCTCCTTGGATGCTGCAGTCAGGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RPEPVSTPAMFS*SPSLDAAVRLS Trigger: AGAGAGCCTGACTGCAGCATCCAAGGAGGGGGAGCACGAGAACATGGCTGGGGTGCTCACTGGCTCCGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR CCA 72 bp | TCAGCGGCAGCTGGGGCAGCACGCTTATTGCGGTGGTaGGGGAAGGTAGGCATGAGCTCCGGTTCACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAAAGAARLLRW*GKVGMSSGSQA Trigger: AGCCTGTGAACCGGAGCTCATGCCTACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCCAGCTGCCGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR CCA 72 bp | CCTTCAGCGGCAGCTGGGGCAGCACGCTTATTGCGGTaGTGGGGGAAGGTAGGCATGAGCTCCGGTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PSAAAGAARLLR*WGKVGMSSGSQ Trigger: CTGTGAACCGGAGCTCATGCCTACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCCAGCTGCCGCTGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR TCA 72 bp | GCCATAAGGCTCTCCCACAAGGTCTGCAGTGCCAAGTaGGAACCTGAGGCCGGAGCCAGTGAGCACCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AIRLSHKVCSAK*EPEAGASEHPS Trigger: GCTGGGGTGCTCACTGGCTCCGGCCTCAGGTTCTCACTTGGCACTGCAGACCTTGTGGGAGAGCCTTATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR TCA 72 bp | GCTAGAGCGACAGGGCCACCAGGCATGGACAGGGACTaGGGGTTGTCGGTAACACCCACCGGCCAGATATTC | + |
|
Preference number: 3 (lower is better) Translates to: ARATGPPGMDRD*GLSVTPTGQIF Trigger: GAATATCTGGCCGGTGGGTGTTACCGACAACCCTCAGTCCCTGTCCATGCCTGGTGGCCCTGTCGCTCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR TCA 72 bp | CCAGGTCTAGACAGGACTCCTCACTTAAGCTGGCCCTaGCCCGTCTCTCCCTTTCTTCTCCCCTGTGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PGLDRTPHLSWP*PVSPFLLPCGA Trigger: GGCCCCACAGGGGAGAAGAAAGGGAGAGACGGGTCAGGGCCAGCTTAAGTGAGGAGTCCTGTCTAGACCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR GCA 72 bp | CCCAGCCATGTTCTCGTGCTCCCCCTCCTTGGATGCTaGAGTCAGGCTCTCTACCACACCAATCCTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PSHVLVLPLLGC*SQALYHTNPAP Trigger: GGGAGCAGGATTGGTGTGGTAGAGAGCCTGACTGCAGCATCCAAGGAGGGGGAGCACGAGAACATGGCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR-3UTR CAA 90 bp | CTATCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCCCAGTTAACCAACCCTaGCTCCCTCCTGCCCGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSWVPHSATSLSTNPLCIPVNQP*LPPARG Trigger: ACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGG...GATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACTGCCCAGTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAAATCCAGTTAACCAACCCTaGCTCCCTCCTGCCCGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QLPSLSWVPHSATSLSTNPVNQP*LPPARG Trigger: ACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGG...ATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTACAAGTATCCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCCCAGGGCCAGAAGACTaGAGGCCCTGGGAGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LTSILLQLTNPCSLLPGVPGPED*RPWEQK Trigger: TTTCTGCTCCCAGGGCCTCAAGTCTTCTGGCCCTGG...GACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACTTGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCTTTTTATCTCTCAGTCCACCAATCCTCTCCTTGGGCACCAGTGCCAGCCGGGGCAGCACGCTTATaGCGGTGGTGGGGGAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: KAFYLSVHQSSPWAPVPAGAARL*RWWGKV Trigger: TACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCC...GGCTGGCACTGGTGCCCAAGGAGAGGATTGGTGGACTGAGAGATAAAAAGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR GCA 72 bp | ATCTCTCAGTCCACCAATCCTCTCCTTGGGCACCAGTaGCAGCCGCGTCCACCAAGGGCTTCCATTCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: ISQSTNPLLGHQ*QPRPPRASILT Trigger: TGTCAGAATGGAAGCCCTTGGTGGACGCGGCTGGCACTGGTGCCCAAGGAGAGGATTGGTGGACTGAGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR CCA 72 bp | GGCTCGGTACCAGAGGGTAACAACCTTGGGAGTCATTaGCTTTACTGGAACACCATAGGCCCGAGCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GSVPEGNNLGSH*LYWNTIGPSQA Trigger: GGCCTGGCTCGGGCCTATGGTGTTCCAGTAAAGCCAATGACTCCCAAGGTTGTTACCCTCTGGTACCGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR CCA 72 bp | AGTAGGAGCTCTCCAGGCAGTCTCCCGAGGTTGCCCTaGGGAATGATAGTGACCTTGGCCTTAGAGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SRSSPGSLPRLP*GMIVTLALERP Trigger: AGGCCTCTCTAAGGCCAAGGTCACTATCATTCCCCAGGGCAACCTCGGGAGACTGCCTGGAGAGCTCCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCTCAAGCTGTACTGGCCGGCCAGCGGCAGCTTGGAGAAACCCGGCCAGACAGAGGGTAACAACCTaGGGAGTCATTGGCTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: VSSSCTGRPAAAWRNPARQRVTT*GVIGFT Trigger: AGTAAAGCCAATGACTCCCAAGGTTGTTACCCTCTG...TCTGGCCGGGTTTCTCCAAGCTGCCGCTGGCCGGCCAGTACAGCTTGAGGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGTTGAGCAGACGGAGTCCGGCCTCTGAGAGCCACGGGAACTTGTGCTTGTCTGTCATGAGCAAGTaGGACACCTTCAGGTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RKLSRRSPASESHGNLCLSVMSK*DTFRSL Trigger: CAGGGACCTGAAGGTGTCCAACTTGCTCATGACAGA...CAAGCACAAGTTCCCGTGGCTCTCAGAGGCCGGACTCCGTCTGCTCAACTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
||
| 3UTR TCA 72 bp | AAGGGGATCCCAAGAACTTACGCAGGGGCTTCTCCTTaGAGTAGGAGCTCTCCAGGCAGTCTCCCGAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KGIPRTYAGASP*SRSSPGSLPRL Trigger: CAACCTCGGGAGACTGCCTGGAGAGCTCCTACTTCAAGGAGAAGCCCCTGCGTAAGTTCTTGGGATCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR CCA 72 bp | GGCCACCAGATGGTGCTACAACTGCCCAGTCTATCCTaGGTACCCCACTCAGCCACATCCCTGTCCACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GHQMVLQLPSLS*VPHSATSLSTN Trigger: ATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTTGTAGCACCATCTGGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR CCA 72 bp | AAGGCTTTTTATCTCTCAGTCCACCAATCCTCTCCTTaGGCACCAGTGCCAGCCGCGTCCACCAAGGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KAFYLSVHQSSP*APVPAASTKGF Trigger: GAAGCCCTTGGTGGACGCGGCTGGCACTGGTGCCCAAGGAGAGGATTGGTGGACTGAGAGATAAAAAGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR CCA 72 bp | AGAAACCACGCCTACCACATGTCAATGCTGGTAGTCTaGGTGGTAGTTCCAAGCAGCAGCTCTGGGGCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: RNHAYHMSMLVV*VVVPSSSSGAR Trigger: CCGAGCCCCAGAGCTGCTGCTTGGAACTACCACCCAGACTACCAGCATTGACATGTGGTAGGCGTGGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR CCA 72 bp | GGTGTCCCCAACAGCTGTACAATCAAGTCGATCTGGTaGATCTCGGAAGTGCCAGGGAGGAGGGGCTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: GVPNSCTIKSIW*ISEVPGRRGLW Trigger: CCATAAGCCCCTCCTCCCTGGCACTTCCGAGATCCACCAGATCGACTTGATTGTACAGCTGTTGGGGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR CCA 72 bp | CTCGGTGTCCCCAACAGCTGTACAATCAAGTCGATCTaGTGGATCTCGGAAGTGCCAGGGAGGAGGGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGVPNSCTIKSI*WISEVPGRRGL Trigger: TAAGCCCCTCCTCCCTGGCACTTCCGAGATCCACCAGATCGACTTGATTGTACAGCTGTTGGGGACACCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR CCA 72 bp | TCTCCCTTTCTTCTCCCCTGTGGGGCCTGTGGTCCCTaGGAATCCAATATGGACAAGCAGGGCTTCTCGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SPFLLPCGACGP*ESNMDKQGFSL Trigger: TAGCGAGAAGCCCTGCTTGTCCATATTGGATTCCCAGGGACCACAGGCCCCACAGGGGAGAAGAAAGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR TCA 72 bp | TCCAGGCTAGTGCCCAGCTCCAGTTCTCACACACACTaGATGGGACCTTTAGGCCTCTCAGCACTAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SRLVPSSSSHTH*MGPLGLSALAL Trigger: CAGAGCTAGTGCTGAGAGGCCTAAAGGTCCCATTCAGTGTGTGTGAGAACTGGAGCTGGGCACTAGCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR GCA 72 bp | CCCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTaGATCTGGACAGAGGGAAATATCAGGGAGGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PHSATSLSTNPL*IWTEGNIREES Trigger: TGACTCCTCCCTGATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGTTGAGCAGACGGAGTCCGGCCTCTGAGAGCCACGGGAACTTGTGCTTGCAGAGGGTAACAACCTaGGGAGTCATTGGCTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: RKLSRRSPASESHGNLCLQRVTT*GVIGFT Trigger: AGTAAAGCCAATGACTCCCAAGGTTGTTACCCTCTG...CAAGCACAAGTTCCCGTGGCTCTCAGAGGCCGGACTCCGTCTGCTCAACTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR TCA 72 bp | GGAGTCCGGCCTCTGAGAGCCACGGGAACTTGTGCTTaGGGTTGTTATAGGGCTGTTTCCTCAAGCTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: GVRPLRATGTCA*GCYRAVSSSCT Trigger: AGTACAGCTTGAGGAAACAGCCCTATAACAACCTCAAGCACAAGTTCCCGTGGCTCTCAGAGGCCGGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR CCA 72 bp | TCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTaGACAGAGGGAAATATCAGGGAGGAGTCAGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SATSLSTNPLCI*TEGNIREESAN Trigger: GTTGGCTGACTCCTCCCTGATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR TCA 72 bp | CATGAAGAGGAAGTTGAGCAGACGGAGTCCGGCCTCTaGGAGCCACGGGAACTTGTGCTTGAGGTTGTTATA | + |
|
Preference number: 3 (lower is better) Translates to: HEEEVEQTESGL*EPRELVLEVVI Trigger: TATAACAACCTCAAGCACAAGTTCCCGTGGCTCTCAGAGGCCGGACTCCGTCTGCTCAACTTCCTCTTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
||
| 3UTR TCA 72 bp | ACCAGTGCCAGCCGCGTCCACCAAGGGCTTCCATTCTaGCAGTCTTACAAGTATCCTACTCCAGTTAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: TSASRVHQGLPF*QSYKYPTPVNQ Trigger: TTGGTTAACTGGAGTAGGATACTTGTAAGACTGTCAGAATGGAAGCCCTTGGTGGACGCGGCTGGCACTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| 3UTR CCA 72 bp | GCCACTCAAACTAGACATCTGGCACCTATGGGTGTCTaGGTATGTCTGGGAAGTGGGTATCTATGGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ATQTRHLAPMGV*VCLGSGYLWSV Trigger: CACAGACCATAGATACCCACTTCCCAGACATACCCAGACACCCATAGGTGCCAGATGTCTAGTTTGAGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR TCA 72 bp | AGGTCCCTGTGGATGATGAAGTTCCTGTGCAGGTACTaGAGGCCACGAAGCACCTGTAGCATGATGCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: RSLWMMKFLCRY*RPRSTCSMMHL Trigger: TAAATGCATCATGCTACAGGTGCTTCGTGGCCTTCAGTACCTGCACAGGAACTTCATCATCCACAGGGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
||
| 3UTR CCA 72 bp | AGGCCACGAAGCACCTGTAGCATGATGCATTTAACCTaGGCCTCCGAGAAGGGTGTTGGCATATTTTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: RPRSTCSMMHLT*ASEKGVGIFSN Trigger: ATTGGAAAATATGCCAACACCCTTCTCGGAGGCCCAGGTTAAATGCATCATGCTACAGGTGCTTCGTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212028.2 |
||
| 3UTR CCA 72 bp | GACCTAAGGCCACTCAAACTAGACATCTGGCACCTATaGGTGTCTGGGTATGTCTGGGAAGTGGGTATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: DLRPLKLDIWHL*VSGYVWEVGIY Trigger: ATAGATACCCACTTCCCAGACATACCCAGACACCCATAGGTGCCAGATGTCTAGTTTGAGTGGCCTTAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR GCA 72 bp | GTTGGCCTTAGCTTCCGTTCCCGAGACCAGAAAAAGTaGATCATGGATTTGGGTTTAAGGTGTCCTTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: VGLSFRSRDQKK*IMDLGLRCPSI Trigger: GATGGAAGGACACCTTAAACCCAAATCCATGATGCACTTTTTCTGGTCTCGGGAACGGAAGCTAAGGCCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR CCA 72 bp | CTAGACATCTGGCACCTATGGGTGTCTGGGTATGTCTaGGAAGTGGGTATCTATGGTCTGTGTTGTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LDIWHLWVSGYV*EVGIYGLCCEK Trigger: TTTCTCACAACACAGACCATAGATACCCACTTCCCAGACATACCCAGACACCCATAGGTGCCAGATGTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTTGCCCTGGGGAATGATAGTGACCTTGGCCTTAGAGAGGCCTATTTCACTAAAAGGTTTGTTGAATaGAGATGGCTCAGTGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: EVALGNDSDLGLREAYFTKRFVE*RWLSAT Trigger: TGTAGCACTGAGCCATCTCAATTCAACAAACCTTTT...AGTGAAATAGGCCTCTCTAAGGCCAAGGTCACTATCATTCCCCAGGGCAACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAAAGGCCTGCTGGGGGGGAGGAGGGGCTTATaGGCCAGCAGCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: REISGRSQPTGGAKGLLGGRRGL*ASSSAR Trigger: CCTGGCAGAGCTGCTGGCCCATAAGCCCCTCCTCCC...CCCCAGCAGGCCTTTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCT 62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGGGCCTCCCAGTCGTCGGCTGATGATCCGTGAGGATGTGGAGGGGTGGCAGCTCCACAATGTTTaGATGGCGGAGACGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGPPSRRLMIREDVEGWQLHNV*MAETQE Trigger: CTCTTGCGTCTCCGCCATCCAAACATTGTGGAGCTG...CCACCCCTCCACATCCTCACGGATCATCAGCCGACGACTGGGAGGCCCCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | CCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACTATAGCCCACCCTTCAGCGGCAGCTaGGGCAGCACGCTTATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PTPVNQPLLPPARGHYSPPFSGS*GSTLIA Trigger: CGCAATAAGCGTGCTGCCCCAGCTGCCGCTGAAGGG...TGGGCTATAGTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| 3UTR CAA 72 bp | TGTTTCCTCAAGCTGTACTGGCCGGCCAGCGGCAGCTaGGAGAAACCCTGTAAGAGGCAGGGGCTAGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CFLKLYWPASGS*EKPCKRQGLER Trigger: TCGCTCTAGCCCCTGCCTCTTACAGGGTTTCTCCAAGCTGCCGCTGGCCGGCCAGTACAGCTTGAGGAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACTATAGCCCATCTGTCCTCTCACGCAGGCTGCTaGTGGGGATGCCATCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLTNPCSLLPGVTIAHLSSHAGC*WGCHPS Trigger: AGAAGGATGGCATCCCCATCAGCAGCCTGCGTGAGA...GGACAGATGGGCTATAGTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
||
| CDS-3UTR TCA 90 bp | CTACAACTGCCCAGTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAGCAGGGGCTTCTCCTTaGAGTAGGAGCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQLPSLSWVPHSATSLSTAGASP*SRSSPG Trigger: GCCTGGAGAGCTCCTACTTCAAGGAGAAGCCCCTGC...TGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR GCA 90 bp | CCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAAATGGGCCAGCAGCTCTaGCAGGATGCAGCCGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSHIPVHKSPLHLDRGKMGQQL*QDAADS Trigger: GCTGTCGGCTGCATCCTGGCAGAGCTGCTGGCCCAT...TTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGAGTTATCTCCCAGGCCTACTCATTCCAGGCTAGTGCCCAGCTCCAGTGGGAGGAGGGGCTTATaGGCCAGCAGCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QEELSPRPTHSRLVPSSSGRRGL*ASSSAR Trigger: CCTGGCAGAGCTGCTGGCCCATAAGCCCCTCCTCCC...ACTGGAGCTGGGCACTAGCCTGGAATGAGTAGGCCTGGGAGATAACTCTTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAAAGGCCTGCTGGGGTGCTCTCCAGGTGGTTaGCCACAACCACCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: REISGRSQPTGGAKGLLGCSPGG*PQPPPS Trigger: TGAAGGAGGTGGTTGTGGGCAACCACCTGGAGAGCA...CCCCAGCAGGCCTTTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
||
| CDS-3UTR GCA 90 bp | AACTGCCCAGTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAAATCGCAGCTCTGCCAGGATaGAGCCGACAGCCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: NCPVYPGYPTQPHPCPQIAALPG*SRQPTC Trigger: ACATGTGGGCTGTCGGCTGCATCCTGGCAGAGCTGC...GATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | AGTATCCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACTATACCCTTCAGCGGCAGCTaGGGCAGCACGCTTATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SILLQLTNPCSLLPGVTIPFSGS*GSTLIA Trigger: CGCAATAAGCGTGCTGCCCCAGCTGCCGCTGAAGGG...TATAGTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| 3UTR CAA 72 bp | TGTTTCCTCAAGCTGTACTGGCCGGCCAGCGGCAGCTaGGAGAAACCCGGCCAGATATTCTCACTCGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CFLKLYWPASGS*EKPGQIFSLGV Trigger: GACACCGAGTGAGAATATCTGGCCGGGTTTCTCCAAGCTGCCGCTGGCCGGCCAGTACAGCTTGAGGAAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
||
| CDS-3UTR TCA 90 bp | CTTACAAGTATCCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCTCTCACGCAGGCTGCTaGTGGGGATGCCATCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTSILLQLTNPCSLLPGVSHAGC*WGCHPS Trigger: AGAAGGATGGCATCCCCATCAGCAGCCTGCGTGAGA...GACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACTTGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
||
| CDS-3UTR TCA 90 bp | CCACATGTCAATGCTGGTAGTCTGGGTGGTAGTTCCAAGCAGCAGCTCTGGGGCTTCCTGTGCAGGTACTaGAGGCCACGAAGCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHVNAGSLGGSSKQQLWGFLCRY*RPRSTC Trigger: ACAGGTGCTTCGTGGCCTTCAGTACCTGCACAGGAA...GCCCCAGAGCTGCTGCTTGGAACTACCACCCAGACTACCAGCATTGACATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| CDS-3UTR CCA 90 bp | CCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACTATAGCCCACAGCTCCACAATGTTTaGATGGCGGAGACGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPVNQPLLPPARGHYSPQLHNV*MAETQE Trigger: CTCTTGCGTCTCCGCCATCCAAACATTGTGGAGCTG...TGGGCTATAGTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAAAGGCCTGCTGGGCAGCTCCACAATGTTTaGATGGCGGAGACGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGNIREESANWRSQRPAGQLHNV*MAETQE Trigger: CTCTTGCGTCTCCGCCATCCAAACATTGTGGAGCTG...CCCAGCAGGCCTTTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACTATAGCCCATCTGTCCATCAAGTCGATCTGGTaGATCTCGGAAGTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLTNPCSLLPGVTIAHLSIKSIW*ISEVPG Trigger: CCCTGGCACTTCCGAGATCCACCAGATCGACTTGAT...GGACAGATGGGCTATAGTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATGCAGGGGCTTCTCCTTaGAGTAGGAGCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHIPVHKSPLHLDRGKYAGASP*SRSSPG Trigger: GCCTGGAGAGCTCCTACTTCAAGGAGAAGCCCCTGC...ATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR TCA 90 bp | GGTGCTACAACTGCCCAGTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCGTTCGCAGTAACCCATaGCCAGGAAGATGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GATTAQSILGTPLSHIPVVRSNP*PGRCIL Trigger: AAGGATGCATCTTCCTGGTCATGGGTTACTGCGAAC...GACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTTGTAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| CDS-3UTR GCA 90 bp | AACTGCCCAGTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAAATCTGCTCTCCAGGTGGTTaGCCACAACCACCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NCPVYPGYPTQPHPCPQICSPGG*PQPPPS Trigger: TGAAGGAGGTGGTTGTGGGCAACCACCTGGAGAGCA...GATTTGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
||
| CDS-3UTR TCA 90 bp | TCTTACAAGTATCCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTTTCCTGTGCAGGTACTaGAGGCCACGAAGCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SYKYPTPVNQPLLPPARGFLCRY*RPRSTC Trigger: ACAGGTGCTTCGTGGCCTTCAGTACCTGCACAGGAA...ACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACTTGTAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAAAGGCCTGCTGGGGACGGGAACTTGTGCTTaGGGTTGTTATAGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: REISGRSQPTGGAKGLLGTGTCA*GCYRAV Trigger: AACAGCCCTATAACAACCTCAAGCACAAGTTCCCGT...CCCCAGCAGGCCTTTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACTATAGCCCATCTGTCCACGGGAACTTGTGCTTaGGGTTGTTATAGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLTNPCSLLPGVTIAHLSTGTCA*GCYRAV Trigger: AACAGCCCTATAACAACCTCAAGCACAAGTTCCCGT...GGACAGATGGGCTATAGTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR GCA 90 bp | TGCATCTGGACAGAGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAATGCTCTCCAGGTGGTTaGCCACAACCACCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CIWTEGNIREESANWRSQCSPGG*PQPPPS Trigger: TGAAGGAGGTGGTTGTGGGCAACCACCTGGAGAGCA...TTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCTCTGTCCAGATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
||
| CDS-3UTR GCA 90 bp | AGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATCAGGGTGGATCTCGGAAGTaGCAGGGAGGAGGGGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SHIPVHKSPLHLDRGKYQGGSRK*QGGGAY Trigger: ATAAGCCCCTCCTCCCTGGCACTTCCGAGATCCACC...CTGATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAAAGGCCTGCTGGGATGATGCATTTAACCTaGGCCTCCGAGAAGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGNIREESANWRSQRPAGMMHLT*ASEKGV Trigger: AACACCCTTCTCGGAGGCCCAGGTTAAATGCATCAT...CCCAGCAGGCCTTTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | CTACAACTGCCCAGTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCCACAAGTCATTGGCTTTACTaGAACACCATAGGCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQLPSLSWVPHSATSLSTSHWLY*NTIGPS Trigger: GCTCGGGCCTATGGTGTTCCAGTAAAGCCAATGACT...TGTGGACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGATATTCTCACTCGGTGTCCCCAACAGCTGTACAATCAAGTCGATCTGGTTCTCACGCAGGCTGCTaGTGGGGATGCCATCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARYSHSVSPTAVQSSRSGSHAGC*WGCHPS Trigger: AGAAGGATGGCATCCCCATCAGCAGCCTGCGTGAGA...ACCAGATCGACTTGATTGTACAGCTGTTGGGGACACCGAGTGAGAATATCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATAAGATGCTCTCCAGGTaGTTGCCCACAACCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSHIPVHKSPLHLDRGKYKMLSR*LPTTTS Trigger: GGAGGTGGTTGTGGGCAACCACCTGGAGAGCATCTT...ATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
||
| 3UTR CAA 72 bp | CAGTCTTACAAGTATCCTACTCCAGTTAACCAACCCTaGCTCCCTCCTGCCCGGGGTCACTATAGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QSYKYPTPVNQP*LPPARGHYSPS Trigger: AGATGGGCTATAGTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACTTGTAAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGAGTTATCTCCCAGGCCTACTCATTCCAGGCTAGTGCCCAGCTCCAGTACCTTCAGGTCCCTGTaGATGATGAAGTTCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QEELSPRPTHSRLVPSSSTFRSL*MMKFLC Trigger: GCACAGGAACTTCATCATCCACAGGGACCTGAAGGT...ACTGGAGCTGGGCACTAGCCTGGAATGAGTAGGCCTGGGAGATAACTCTTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | TGCATCTGGACAGAGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAAACCTTCAGGTCCCTGTaGATGATGAAGTTCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CIWTEGNIREESANWRSQTFRSL*MMKFLC Trigger: GCACAGGAACTTCATCATCCACAGGGACCTGAAGGT...TTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCTCTGTCCAGATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | AGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATCAGATCAAGTCGATCTGGTaGATCTCGGAAGTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHIPVHKSPLHLDRGKYQIKSIW*ISEVPG Trigger: CCCTGGCACTTCCGAGATCCACCAGATCGACTTGAT...CTGATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATAGTCATTGGCTTTACTaGAACACCATAGGCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHIPVHKSPLHLDRGKYSHWLY*NTIGPS Trigger: GCTCGGGCCTATGGTGTTCCAGTAAAGCCAATGACT...ATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| 3UTR CAA 72 bp | AGTCTCCCGAGGTTGCCCTGGGGAATGATAGTGACCTaGGCCTTAGAGAGGCCTATTTCACTCAAACTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPRLPWGMIVT*ALERPISLKLS Trigger: GCTAAGTTTGAGTGAAATAGGCCTCTCTAAGGCCAAGGTCACTATCATTCCCCAGGGCAACCTCGGGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
||
| CDS-3UTR CCA 90 bp | ATGCATTTAACCTGGGCCTCCGAGAAGGGTGTTGGCATATTTTCCAATAGGCTGCAGCTCCACAATGTTTaGATGGCGGAGACGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MHLTWASEKGVGIFSNRLQLHNV*MAETQE Trigger: CTCTTGCGTCTCCGCCATCCAAACATTGTGGAGCTG...CAGCCTATTGGAAAATATGCCAACACCCTTCTCGGAGGCCCAGGTTAAATGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212028.2 |
||
| CDS-3UTR CCA 90 bp | AGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATCAGATGATGCATTTAACCTaGGCCTCCGAGAAGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHIPVHKSPLHLDRGKYQMMHLT*ASEKGV Trigger: AACACCCTTCTCGGAGGCCCAGGTTAAATGCATCAT...CTGATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATATGATGCATTTAACCTaGGCCTCCGAGAAGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSHIPVHKSPLHLDRGKYMMHLT*ASEKGV Trigger: AACACCCTTCTCGGAGGCCCAGGTTAAATGCATCAT...ATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212361.2 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | AGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATCAGACAATCAAGTCGATCTaGTGGATCTCGGAAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHIPVHKSPLHLDRGKYQTIKSI*WISEVP Trigger: TGGCACTTCCGAGATCCACCAGATCGACTTGATTGT...CTGATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATACAATCAAGTCGATCTaGTGGATCTCGGAAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHIPVHKSPLHLDRGKYTIKSI*WISEVP Trigger: TGGCACTTCCGAGATCCACCAGATCGACTTGATTGT...ATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
||
| 3UTR CAA 72 bp | GCTGTCTTTACACAGCCCTTGTCTGTCATGAGCAAGTaGGACACCTTCAGGTCCCTGTGGATGATGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVFTQPLSVMSK*DTFRSLWMMKF Trigger: GAACTTCATCATCCACAGGGACCTGAAGGTGTCCAACTTGCTCATGACAGACAAGGGCTGTGTAAAGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212193.2 |
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| CDS-3UTR CAA 90 bp | CCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACTATAGCCCAGGGGCAGCACGCTTATaGCGGTGGTGGGGGAAGGTA | + |
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Preference number: 5 (lower is better) Translates to: PTPVNQPLLPPARGHYSPGAARL*RWWGKV Trigger: TACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCC...TGGGCTATAGTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | AGGCTTTTTATCTCTCAGTCCACCAATCCTCTCCTTGGGCACCAGTGCCAGCCGCAGGGCCGGCATCGTTaGCTCTGCCCTTCAGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: RLFISQSTNPLLGHQCQPQGRHR*LCPSAA Trigger: TGCCGCTGAAGGGCAGAGCAAACGATGCCGGCCCTG...CGGCTGGCACTGGTGCCCAAGGAGAGGATTGGTGGACTGAGAGATAAAAAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | TACAAGTATCCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACCAGGGCCGGCATCGTTaGCTCTGCCCTTCAGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: YKYPTPVNQPLLPPARGHQGRHR*LCPSAA Trigger: TGCCGCTGAAGGGCAGAGCAAACGATGCCGGCCCTG...GTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACTTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS CCA 90 bp | CTCCAGGTGGTTGCCCACAACCACCTCCTTCAGCTCCACAATGTTTaGATGGCGGAGACGCAAGAGCAGTGTGATCTCACGCAGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LQVVAHNHLLQLHNV*MAETQEQCDLTQAA Trigger: AGCAGCCTGCGTGAGATCACACTGCTCTTGCGTCTCCGCCATCCAAACATTGTGGAGCTGAAGGAGGTGGTTGTGGGCAACCACCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | CCCACTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATGCTCTCCAGGTGGTaGCCCACAACCACCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PTQPHPCPQIPSASGQREMLSRW*PTTTSF Trigger: GAAGGAGGTGGTTGTGGGCAACCACCTGGAGAGCAT...TTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | GGTGCTACAACTGCCCAGTCTATCCTGGGTACCCCACTCAGCCACATCCCTGTCTACATGAAGAGGAAGTaGAGCAGACGGAGTCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: GATTAQSILGTPLSHIPVYMKRK*SRRSPA Trigger: GGCCGGACTCCGTCTGCTCAACTTCCTCTTCATGTA...GACAGGGATGTGGCTGAGTGGGGTACCCAGGATAGACTGGGCAGTTGTAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | AGTATCCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACTATAGGGGCAGCACGCTTATaGCGGTGGTGGGGGAAGGTA | + |
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Preference number: 5 (lower is better) Translates to: SILLQLTNPCSLLPGVTIGAARL*RWWGKV Trigger: TACCTTCCCCCACCACCGCAATAAGCGTGCTGCCCC...TATAGTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS CCA 90 bp | AGGTGGTTGCCCACAACCACCTCCTTCAGCTCCACAATGTTTGGATaGCGGAGACGCAAGAGCAGTGTGATCTCACGCAGGCTGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: RWLPTTTSFSSTMFG*RRRKSSVISRRLLM Trigger: CATCAGCAGCCTGCGTGAGATCACACTGCTCTTGCGTCTCCGCCATCCAAACATTGTGGAGCTGAAGGAGGTGGTTGTGGGCAACCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | TACAAGTATCCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCACATGCTCTCCAGGTGGTaGCCCACAACCACCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: YKYPTPVNQPLLPPARGHMLSRW*PTTTSF Trigger: GAAGGAGGTGGTTGTGGGCAACCACCTGGAGAGCAT...GTGACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | GGACAGAGGGAAATATCAGGGAGGAGTCAGCCAACTGGAGGAGCCAAAGGCCTGTACATGAAGAGGAAGTaGAGCAGACGGAGTCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: GQREISGRSQPTGGAKGLYMKRK*SRRSPA Trigger: GGCCGGACTCCGTCTGCTCAACTTCCTCTTCATGTA...CAGGCCTTTGGCTCCTCCAGTTGGCTGACTCCTCCCTGATATTTCCCTCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | AGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATCAGATGCTCTCCAGGTGGTaGCCCACAACCACCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SHIPVHKSPLHLDRGKYQMLSRW*PTTTSF Trigger: GAAGGAGGTGGTTGTGGGCAACCACCTGGAGAGCAT...CTGATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | AGGCTTTTTATCTCTCAGTCCACCAATCCTCTCCTTGGGCACCAGTGCCAGCCGTCTGTCATGAGCAAGTaGGACACCTTCAGGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: RLFISQSTNPLLGHQCQPSVMSK*DTFRSL Trigger: CAGGGACCTGAAGGTGTCCAACTTGCTCATGACAGA...CGGCTGGCACTGGTGCCCAAGGAGAGGATTGGTGGACTGAGAGATAAAAAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS TCA 90 bp | GACACCTTCAGGTCCCTGTGGATGATGAAGTTCCTGTGCAGGTACTaGAGGCCACGAAGCACCTGTAGCATGATGCATTTAACCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: DTFRSLWMMKFLCRY*RPRSTCSMMHLTWA Trigger: GGCCCAGGTTAAATGCATCATGCTACAGGTGCTTCGTGGCCTTCAGTACCTGCACAGGAACTTCATCATCCACAGGGACCTGAAGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | CCTGGGCAGCTCCTAGTCTCCAAGAAGAGTTATCTCCCAGGCCTACTCATTCCATCTGTCATGAGCAAGTaGGACACCTTCAGGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: PGQLLVSKKSYLPGLLIPSVMSK*DTFRSL Trigger: CAGGGACCTGAAGGTGTCCAACTTGCTCATGACAGA...TGGAATGAGTAGGCCTGGGAGATAACTCTTCTTGGAGACTAGGAGCTGCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | CTTACAAGTATCCTACTCCAGTTAACCAACCCTTGCTCCCTCCTGCCCGGGGTCCAGAGGGTAACAACCTaGGGAGTCATTGGCTTTACT | + |
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Preference number: 5 (lower is better) Translates to: LTSILLQLTNPCSLLPGVQRVTT*GVIGFT Trigger: AGTAAAGCCAATGACTCCCAAGGTTGTTACCCTCTG...GACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACTTGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCCACATCCCTGTCCACAAATCCCCTCTGCATCTGGACAGAGGGAAATATCCTCCGAGAAGGGTGTaGGCATATTTTCCAATAGGC | + |
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Preference number: 5 (lower is better) Translates to: LSHIPVHKSPLHLDRGKYPPRRV*AYFPIG Trigger: GCCTATTGGAAAATATGCCAACACCCTTCTCGGAGG...ATATTTCCCTCTGTCCAGATGCAGAGGGGATTTGTGGACAGGGATGTGGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212193.2 ENSMUST00000212361.2 ENSMUST00000213005.2 |
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| CDS-3UTR CAA 90 bp | CCTGGGCAGCTCCTAGTCTCCAAGAAGAGTTATCTCCCAGGCCTACTCATTCCACAGAGGGTAACAACCTaGGGAGTCATTGGCTTTACT | + |
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Preference number: 5 (lower is better) Translates to: PGQLLVSKKSYLPGLLIPQRVTT*GVIGFT Trigger: AGTAAAGCCAATGACTCCCAAGGTTGTTACCCTCTG...TGGAATGAGTAGGCCTGGGAGATAACTCTTCTTGGAGACTAGGAGCTGCCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036880.8 ENSMUST00000213005.2 |
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| CDS CCA 90 bp | CTTCTCAAACTCCTTAACGCTTCGGCATCTTCCCAGCCTGTGTTCTaGAGGCACGGTGAAGAAACCTTCCTTACGGATACACTTCAATCG | + |
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Preference number: 5 (lower is better) Translates to: LLKLLNASASSQPVF*RHGEETFLTDTLQS Trigger: CGATTGAAGTGTATCCGTAAGGAAGGTTTCTTCACCGTGCCTCCAGAACACAGGCTGGGAAGATGCCGAAGCGTTAAGGAGTTTGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212028.2 ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| CDS-3UTR CAA 90 bp | GCCAGATATTCTCACTCGGTGTCCCCAACAGCTGTACAATCAAGTCGATCTGGTCCTCCGAGAAGGGTGTaGGCATATTTTCCAATAGGC | + |
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Preference number: 5 (lower is better) Translates to: ARYSHSVSPTAVQSSRSGPPRRV*AYFPIG Trigger: GCCTATTGGAAAATATGCCAACACCCTTCTCGGAGG...ACCAGATCGACTTGATTGTACAGCTGTTGGGGACACCGAGTGAGAATATCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| CDS GCA 72 bp | TCTGGGTATCCCTGGCCCGATACACGATGCCATAGGTaGCCTCGCCAATCCGGTTCAGCTTCTCAAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: SGYPWPDTRCHR*PRQSGSASQTP Trigger: AGGAGTTTGAGAAGCTGAACCGGATTGGCGAGGGCACCTATGGCATCGTGTATCGGGCCAGGGATACCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212028.2 ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| CDS CCA 72 bp | TCTTCAGGGCGACAATTTCATCTGTCTGGGTATCCCTaGCCCGATACACGATGCCATAGGTGCCCTCGCCAA | + |
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Preference number: 6 (lower is better) Translates to: SSGRQFHLSGYP*PDTRCHRCPRQ Trigger: TTGGCGAGGGCACCTATGGCATCGTGTATCGGGCCAGGGATACCCAGACAGATGAAATTGTCGCCCTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212028.2 ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| CDS TCA 72 bp | TTCGGCATCTTCCCAGCCTGTGTTCTGGAGGCACGGTaGAGAAACCTTCCTTACGGATACACTTCAATCGGA | + |
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Preference number: 6 (lower is better) Translates to: FGIFPACVLEAR*RNLPYGYTSIG Trigger: TCCGATTGAAGTGTATCCGTAAGGAAGGTTTCTTCACCGTGCCTCCAGAACACAGGCTGGGAAGATGCCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036880.8 ENSMUST00000212028.2 ENSMUST00000212193.2 ENSMUST00000212361.2 |
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| CDS TCA 72 bp | CCAATAGGCTGGCCAGATCTTGTTCGCAGTAACCCATaGCCAGGAAGATGCATCCTTCTCTTTGTCCATCCG | + |
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Preference number: 6 (lower is better) Translates to: PIGWPDLVRSNP*PGRCILLFVHP Trigger: CGGATGGACAAAGAGAAGGATGCATCTTCCTGGTCATGGGTTACTGCGAACAAGATCTGGCCAGCCTATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212361.2 |
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| CDS CAA 90 bp | CAGGCTGCTGATGGGGATGCTCTTGAATTCATTACAGATGTAGATTaGGAGGGTGACAATGACCTCCCATCCTTCTCTTTGTCCATCCGC | + |
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Preference number: 6 (lower is better) Translates to: QAADGDALEFITDVD*EGDNDLPSFSLSIR Trigger: GCGGATGGACAAAGAGAAGGATGGGAGGTCATTGTCACCCTCCAAATCTACATCTGTAATGAATTCAAGAGCATCCCCATCAGCAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212028.2 |
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| CDS CAA 72 bp | GATGGGGATGCTCTTGAATTCATTACAGATGTAGATTaGGAGGGTGACAATGACCTCCCATCCTTCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: DGDALEFITDVD*EGDNDLPSFSL Trigger: CAAAGAGAAGGATGGGAGGTCATTGTCACCCTCCAAATCTACATCTGTAATGAATTCAAGAGCATCCCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212028.2 |
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