Pregenerated sensors for CDK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019942Ensembl transcript IDs: ENSMUST00000020099.13, ENSMUST00000119827.8, ENSMUST00000152448.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCTACAATCAGGAGCGTCAGGGCTCAGGGCTGGGGACCTTCCCTaGCTCCAGCAAATGCAGGAGGCTGAGGCTGAGGTACTGGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: SLQSGASGLRAGDLP*LQQMQEAEAEVLVN Trigger: GTTTACCAGTACCTCAGCCTCAGCCTCCTGCATTTGCTGGAGTCAGGGAAGGTCCCCAGCCCTGAGCCCTGACGCTCCTGATTGTAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CCA 90 bp | GAGCTAGCAGCTCTCCTCTCTTCAGAAGCTGAGGGGTCCTCATTGTaGAGTGCGATGGGTTCCAAGCTGTCGTCTAGGCTGGTTGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: ELAALLSSEAEGSSL*SAMGSKLSSRLVEN Trigger: GTTCTCAACCAGCCTAGACGACAGCTTGGAACCCATCGCACTCCACAATGAGGACCCCTCAGCTTCTGAAGAGAGGAGAGCTGCTAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR GCA 90 bp | GCCCAGTTCCCAGCAGCAGCAGGGAACCACACCAACACAGGTTTCTaGAGCAGTTGGTGTTTGCTGACCACTCTAACTGATCTGTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: AQFPAAAGNHTNTGF*SSWCLLTTLTDLSW Trigger: CCAAGACAGATCAGTTAGAGTGGTCAGCAAACACCAACTGCTGCAGAAACCTGTGTTGGTGTGGTTCCCTGCTGCTGCTGGGAACTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR TCA 90 bp | GGAGTCTTCATAAATGTTCTAAGCTGTCCTGCTCTGGACAGCCCCTaGTCTCTAGCTGTGAAACCCAGCCAGCTTTGGTGCACTTCCATC | + |
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Preference number: 1 (lower is better) Translates to: GVFINVLSCPALDSP*SLAVKPSQLWCTSI Trigger: GATGGAAGTGCACCAAAGCTGGCTGGGTTTCACAGCTAGAGATCAGGGGCTGTCCAGAGCAGGACAGCTTAGAACATTTATGAAGACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR TCA 90 bp | GTTCTCAAGTCATGTCACACTAATCACCGTCTTAGTCAGGACTCTTaGAAATGTCAGCAAGACAAACCCAAGTATAGAAAACCTGGCGGG | + |
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Preference number: 1 (lower is better) Translates to: VLKSCHTNHRLSQDS*KCQQDKPKYRKPGG Trigger: CCCGCCAGGTTTTCTATACTTGGGTTTGTCTTGCTGACATTTTCAAGAGTCCTGACTAAGACGGTGATTAGTGTGACATGACTTGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CCA 90 bp | GCGATACGGCTCCTTTTCCAAAGTGAGGAATCTCAGCTAAATATTTaGACAAGGACATTTTTAGACACTGCTAAGAGAGGACAGGAGATT | + |
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Preference number: 1 (lower is better) Translates to: AIRLLFQSEESQLNI*TRTFLDTAKRGQEI Trigger: AATCTCCTGTCCTCTCTTAGCAGTGTCTAAAAATGTCCTTGTCCAAATATTTAGCTGAGATTCCTCACTTTGGAAAAGGAGCCGTATCGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCCTCGCTAGTGCTGAGAGCCTTTCCAGCAAAATGCTCCAGCATCTGAGATTCCCGCCCCCAACATaGGGGGCTGAGACCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: GSLASAESLSSKMLQHLRFPPPT*GAETNG Trigger: TCCATTGGTCTCAGCCCCTCATGTTGGGGGCGGGAA...TCTCAGATGCTGGAGCATTTTGCTGGAAAGGCTCTCAGCACTAGCGAGGCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CAA 90 bp | TGCTCTGGACAGCCCCTGATCTCTAGCTGTGAAACCCAGCCAGCTTaGGTGCACTTCCATCTGGGGGTCATTACTCTAGACATCCTCGGG | + |
|
Preference number: 2 (lower is better) Translates to: CSGQPLISSCETQPA*VHFHLGVITLDILG Trigger: CCCGAGGATGTCTAGAGTAATGACCCCCAGATGGAAGTGCACCAAAGCTGGCTGGGTTTCACAGCTAGAGATCAGGGGCTGTCCAGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CAA 90 bp | TACAGTCCAAGATCGTTTGGGGGACTCCTCAGACCCAAGCAGGATTaGAACCCTCAAAGCCGCCAACTCTTCAGCAGGCCTTCCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: YSPRSFGGLLRPKQD*NPQSRQLFSRPSCA Trigger: AGCACAGGAAGGCCTGCTGAAGAGTTGGCGGCTTTGAGGGTTCAAATCCTGCTTGGGTCTGAGGAGTCCCCCAAACGATCTTGGACTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCCTCGCTAGTGCTGAGAGCCTTTCCAGCAAAATGCTCCAGCATCTGAGAGGAACTCAGGCAGGCTaGCCTCCAACTCAAGAGATA | + |
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Preference number: 2 (lower is better) Translates to: GSLASAESLSSKMLQHLRGTQAG*PPTQEI Trigger: TATCTCTTGAGTTGGAGGCCAGCCTGCCTGAGTTCC...TCTCAGATGCTGGAGCATTTTGCTGGAAAGGCTCTCAGCACTAGCGAGGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCTCTACAATCAGGAGCGTCAGGGCTCAGGGCTGGGGACCTTCCCTGACTCCTTCTCATCCCAACTaGTTAAGCACAAGTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: TVSTIRSVRAQGWGPSLTPSHPN*LSTSRK Trigger: TTTTCTACTTGTGCTTAAGCAGTTGGGATGAGAAGG...AGTCAGGGAAGGTCCCCAGCCCTGAGCCCTGACGCTCCTGATTGTAGAGACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CAA 90 bp | CAAGAAACTGACCAGGAATCATATATATCCAGAACACGGAGGCACTaGAAAGCATCACGAGGCCTGAGCTCAGCTCCTTCAACTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: QETDQESYISRTRRH*KASRGLSSAPSTVL Trigger: GAGCACAGTTGAAGGAGCTGAGCTCAGGCCTCGTGATGCTTTCAAGTGCCTCCGTGTTCTGGATATATATGATTCCTGGTCAGTTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGCCAGAAAGCCCAAGTTCCATTTCCAACTGCTGCTTAAGCCTGTGGCCTTAGTGTATAAACTGTaGAAACAACACCCCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PGARKPKFHFQLLLKPVALVYKL*KQHPSH Trigger: ATGGCTGGGGTGTTGTTTCCACAGTTTATACACTAA...GGCCACAGGCTTAAGCAGCAGTTGGAAATGGAACTTGGGCTTTCTGGCTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR GCA 90 bp | GAAACTGACCAGGAATCATATATATCCAGAACACGGAGGCACTTGAAAGCATCACAGCTCCTTCAACTGTaGTCCGAGCTGCAGGAATGG | + |
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Preference number: 2 (lower is better) Translates to: ETDQESYISRTRRHLKASQLLQL*SELQEW Trigger: CCATTCCTGCAGCTCGGAGCACAGTTGAAGGAGCTG...TGATGCTTTCAAGTGCCTCCGTGTTCTGGATATATATGATTCCTGGTCAGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR GCA 90 bp | AGACTGATGTTGGTTAAACGTGTCTTATTCTGTGTTCTGGGAAATGCTCATCTCCCTGACTCCAGCAAATaGAGGAGGCTGAGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: RLMLVKRVLFCVLGNAHLPDSSK*RRLRLR Trigger: CCTCAGCCTCAGCCTCCTGCATTTGCTGGAGTCAGG...GAGATGAGCATTTCCCAGAACACAGAATAAGACACGTTTAACCAACATCAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR TCA 90 bp | GTTGCCTCTTCAAGTCTGATGTCTGGGAACCAAAAGCCCATTTTATACACCCTTTCTCAGGCATCCCTTTaGCTGCTAGCAGATAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: VASSSLMSGNQKPILYTLSQASL*LLADKS Trigger: TGACTTATCTGCTAGCAGTCAAAGGGATGCCTGAGA...AAGGGTGTATAAAATGGGCTTTTGGTTCCCAGACATCAGACTTGAAGAGGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGTTAAACGTGTCTTATTCTGTGTTCTGGGAAATGCTCATCTCTTCGTGCCAGCAGTCATTCTCATaGGTTTACATCCACAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: CWLNVSYSVFWEMLISSCQQSFS*VYIHRE Trigger: TTCCCTGTGGATGTAAACCCATGAGAATGACTGCTG...GCACGAAGAGATGAGCATTTCCCAGAACACAGAATAAGACACGTTTAACCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR TCA 90 bp | GTTGCCTCTTCAAGTCTGATGTCTGGGAACCAAAAGCCCATTTTATACACCCTTCTACCTCATTCCTTCTaGATACAAAGTACCAACAGT | + |
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Preference number: 2 (lower is better) Translates to: VASSSLMSGNQKPILYTLLPHSF*IQSTNS Trigger: ACTGTTGGTACTTTGTATTCAGAAGGAATGAGGTAG...AAGGGTGTATAAAATGGGCTTTTGGTTCCCAGACATCAGACTTGAAGAGGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR TCA 90 bp | ACTACACAGAACTTGCCTAGGACTAAATCTTGTCCATTTCAAGAGTTTTCTAAAGCAGGATGTTTGTTCTaGTCCTCAGGAAAGGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: TTQNLPRTKSCPFQEFSKAGCLF*SSGKGC Trigger: ACAGCCCTTTCCTGAGGATCAGAACAAACATCCTGC...TTTAGAAAACTCTTGAAATGGACAAGATTTAGTCCTAGGCAAGTTCTGTGTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR GCA 90 bp | ACTACACAGAACTTGCCTAGGACTAAATCTTGTCCATTTCAAGAGTTTTCTAAACTGTGTTCTGGGAAATaGTCATCTCTTCGTGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: TTQNLPRTKSCPFQEFSKLCSGK*SSLRAN Trigger: GTTAGCACGAAGAGATGAGCATTTCCCAGAACACAG...TTTAGAAAACTCTTGAAATGGACAAGATTTAGTCCTAGGCAAGTTCTGTGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CCA 72 bp | CAAAGCCGCCAACTCTTCAGCAGGCCTTCCTGTGCTTaGGGACGCTTGCCCCTCCTTCCCGCCCCCAACATG | + |
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Preference number: 3 (lower is better) Translates to: QSRQLFSRPSCA*GRLPLLPAPNM Trigger: CATGTTGGGGGCGGGAAGGAGGGGCAAGCGTCCCCAAGCACAGGAAGGCCTGCTGAAGAGTTGGCGGCTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR CAA 90 bp | ACAGTCTCTACAATCAGGAGCGTCAGGGCTCAGGGCTGGGGACCTTCCCTGACTAGAACACGGAGGCACTaGAAAGCATCACGAGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: TVSTIRSVRAQGWGPSLTRTRRH*KASRGL Trigger: CAGGCCTCGTGATGCTTTCAAGTGCCTCCGTGTTCT...AGTCAGGGAAGGTCCCCAGCCCTGAGCCCTGACGCTCCTGATTGTAGAGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR CAA 90 bp | GGCAGCCTCGCTAGTGCTGAGAGCCTTTCCAGCAAAATGCTCCAGCATCTGAGAGACATCCTCGGGTCTTaGGCCTTCTCATCCCAACTG | + |
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Preference number: 3 (lower is better) Translates to: GSLASAESLSSKMLQHLRDILGS*AFSSQL Trigger: CAGTTGGGATGAGAAGGCCAAAGACCCGAGGATGTC...TCTCAGATGCTGGAGCATTTTGCTGGAAAGGCTCTCAGCACTAGCGAGGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR CAA 90 bp | GGCAGCCTCGCTAGTGCTGAGAGCCTTTCCAGCAAAATGCTCCAGCATCTGAGAACAGTCCAAGATCGTTaGGGGGACTCCTCAGACCCA | + |
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Preference number: 3 (lower is better) Translates to: GSLASAESLSSKMLQHLRTVQDR*GDSSDP Trigger: TGGGTCTGAGGAGTCCCCCAAACGATCTTGGACTGT...TCTCAGATGCTGGAGCATTTTGCTGGAAAGGCTCTCAGCACTAGCGAGGCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR GCA 72 bp | CGCCCCCAACATGAGGGGCTGAGACCAATGGAGCGCTaGGGCGGAAGAAACCTCTATTATACAGAAAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: RPQHEGLRPMER*GGRNLYYTESD Trigger: ATCACTTTCTGTATAATAGAGGTTTCTTCCGCCGCAGCGCTCCATTGGTCTCAGCCCCTCATGTTGGGGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR GCA 72 bp | CCAGCAGCAGCAGGGAACCACACCAACACAGGTTTCTaGAGCAGTTGGTGTTTGCTGACCACTCTAACTGAT | + |
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Preference number: 3 (lower is better) Translates to: PAAAGNHTNTGF*SSWCLLTTLTD Trigger: ATCAGTTAGAGTGGTCAGCAAACACCAACTGCTGCAGAAACCTGTGTTGGTGTGGTTCCCTGCTGCTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR GCA 72 bp | AAAGGGAGTGAGGCAACCAAAGATGGGGTAAAAGCGTaGAATGCTAGTTCTGAGCTCCACGGCATGGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: KGSEATKDGVKA*NASSELHGMGE Trigger: CTCACCCATGCCGTGGAGCTCAGAACTAGCATTGCACGCTTTTACCCCATCTTTGGTTGCCTCACTCCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CCA 72 bp | AGCCCAAGTTCCATTTCCAACTGCTGCTTAAGCCTGTaGCCTACCCGTGGAGGAAAGCAAAGGACTAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: SPSSISNCCLSL*PTRGGKQRTRA Trigger: TGCTCTAGTCCTTTGCTTTCCTCCACGGGTAGGCCACAGGCTTAAGCAGCAGTTGGAAATGGAACTTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR TCA 72 bp | ATAAATGTTCTAAGCTGTCCTGCTCTGGACAGCCCCTaGTCTCTAGCTGTGAAACCCAGCCAGCTTTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: INVLSCPALDSP*SLAVKPSQLWC Trigger: GCACCAAAGCTGGCTGGGTTTCACAGCTAGAGATCAGGGGCTGTCCAGAGCAGGACAGCTTAGAACATTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR TCA 72 bp | CTTGGATTTCAAGGTGTAATGCAGGAACAGAACCCATaGTCAACCGCAGCCCCAAGCTCTCTAGTCTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LGFQGVMQEQNP*STAAPSSLVLG Trigger: GCCCAAGACTAGAGAGCTTGGGGCTGCGGTTGATCATGGGTTCTGTTCCTGCATTACACCTTGAAATCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR GCA 72 bp | CCTCCAGGATGGTCTCTGACACTGGAGTGCCCTAAATaGATGTGGCTGCTGACTACTTCAATGAACGTTTTA | + |
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Preference number: 3 (lower is better) Translates to: PPGWSLTLECPK*MWLLTTSMNVL Trigger: TAAAACGTTCATTGAAGTAGTCAGCAGCCACATGCATTTAGGGCACTCCAGTGTCAGAGACCATCCTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CCA 72 bp | GCTGGCTTACTCGGTTGCCTCTTCAAGTCTGATGTCTaGGAACCAAAAGCCCATTTTATACACCCTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: AGLLGCLFKSDV*EPKAHFIHPSQ Trigger: CTGAGAAGGGTGTATAAAATGGGCTTTTGGTTCCCAGACATCAGACTTGAAGAGGCAACCGAGTAAGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR CAA 90 bp | TTATTCTGTGTTCTGGGAAATGCTCATCTCTTCGTGCTAACTCACTTTCCCTCAAGACCCAAGCAGGATTaGAACCCTCAAAGCCGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LFCVLGNAHLFVLTHFPSRPKQD*NPQSRQ Trigger: TTGGCGGCTTTGAGGGTTCAAATCCTGCTTGGGTCT...TGAGGGAAAGTGAGTTAGCACGAAGAGATGAGCATTTCCCAGAACACAGAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR TCA 72 bp | GTCTATAGCTGGCTTACTCGGTTGCCTCTTCAAGTCTaGTGTCTGGGAACCAAAAGCCCATTTTATACACCC | + |
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Preference number: 3 (lower is better) Translates to: VYSWLTRLPLQV*CLGTKSPFYTP Trigger: GGGTGTATAAAATGGGCTTTTGGTTCCCAGACATCAGACTTGAAGAGGCAACCGAGTAAGCCAGCTATAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR TCA 72 bp | TGGATCCCAAATATAATAGGAGAAATTTCTCGAGGCTaGGTTCTTTGTTCTGGCAGCAGGGGACCGGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: WIPNIIGEISRG*VLCSGSRGPVC Trigger: ACACACCGGTCCCCTGCTGCCAGAACAAAGAACTCAGCCTCGAGAAATTTCTCCTATTATATTTGGGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR GCA 72 bp | AAAATAGGGAGTCTTCATAAATGTTCTAAGCTGTCCTaGTCTGGACAGCCCCTGATCTCTAGCTGTGAAACC | + |
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Preference number: 3 (lower is better) Translates to: KIGSLHKCSKLS*SGQPLISSCET Trigger: GGTTTCACAGCTAGAGATCAGGGGCTGTCCAGAGCAGGACAGCTTAGAACATTTATGAAGACTCCCTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR-3UTR CAA 90 bp | ACTACACAGAACTTGCCTAGGACTAAATCTTGTCCATTTCAAGAGTTTTCTAAAGAAACCCAGCCAGCTTaGGTGCACTTCCATCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: TTQNLPRTKSCPFQEFSKETQPA*VHFHLG Trigger: CCCCAGATGGAAGTGCACCAAAGCTGGCTGGGTTTC...TTTAGAAAACTCTTGAAATGGACAAGATTTAGTCCTAGGCAAGTTCTGTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR TCA 72 bp | TCCTTTTATTCCGTGCCATTAGGCACATTAAATTATTaGGTCGTCCCTGTCTTGGGACATGCTGGATCCCAA | + |
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Preference number: 3 (lower is better) Translates to: SFYSVPLGTLNY*VVPVLGHAGSQ Trigger: TTGGGATCCAGCATGTCCCAAGACAGGGACGACTCAATAATTTAATGTGCCTAATGGCACGGAATAAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CCA 72 bp | ACCTCCTGGCTACCCAAATTTTTAGTGTATAAACTGTaGAAACAACACCCCAGCCATTCAATCGCTACCTCA | + |
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Preference number: 3 (lower is better) Translates to: TSWLPKFLVYKL*KQHPSHSIATS Trigger: TGAGGTAGCGATTGAATGGCTGGGGTGTTGTTTCCACAGTTTATACACTAAAAATTTGGGTAGCCAGGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CCA 72 bp | AAAAACACTGTCCGTAGGTGGGTTGTAGTTTCCAAATaGCAAGAAACTGACCAGGAATCATATATATCCAGA | + |
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Preference number: 3 (lower is better) Translates to: KNTVRRWVVVSK*QETDQESYISR Trigger: TCTGGATATATATGATTCCTGGTCAGTTTCTTGCCATTTGGAAACTACAACCCACCTACGGACAGTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CCA 72 bp | ATTAAATTATTGAGTCGTCCCTGTCTTGGGACATGCTaGATCCCAAATATAATAGGAGAAATTTCTCGAGGC | + |
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Preference number: 3 (lower is better) Translates to: IKLLSRPCLGTC*IPNIIGEISRG Trigger: GCCTCGAGAAATTTCTCCTATTATATTTGGGATCCAGCATGTCCCAAGACAGGGACGACTCAATAATTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR TCA 72 bp | TCATGTCACACTAATCACCGTCTTAGTCAGGACTCTTaGAAATGTCAGCAAGACAAACCCAAGTATAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: SCHTNHRLSQDS*KCQQDKPKYRK Trigger: TTTTCTATACTTGGGTTTGTCTTGCTGACATTTTCAAGAGTCCTGACTAAGACGGTGATTAGTGTGACATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR GCA 72 bp | CACATTAAATTATTGAGTCGTCCCTGTCTTGGGACATaGTGGATCCCAAATATAATAGGAGAAATTTCTCGA | + |
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Preference number: 3 (lower is better) Translates to: HIKLLSRPCLGT*WIPNIIGEISR Trigger: TCGAGAAATTTCTCCTATTATATTTGGGATCCAGCATGTCCCAAGACAGGGACGACTCAATAATTTAATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| CDS-3UTR CCA 90 bp | CGTCAGGGCTCAGGGCTGGGGACCTTCCCTGACTCCAGCAAATGCAGGAGGCTGAAGATCCTGAAGAGCTaGTCAATCTCTGAGTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: RQGSGLGTFPDSSKCRRLKILKS*SISESP Trigger: CGGCGACTCAGAGATTGACCAGCTCTTCAGGATCTT...CAGCCTCCTGCATTTGCTGGAGTCAGGGAAGGTCCCCAGCCCTGAGCCCTGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| CDS-3UTR CCA 90 bp | ACAGTCTCTACAATCAGGAGCGTCAGGGCTCAGGGCTGGGGACCTTCCCTGACTAGATGTCAACCGGAGTaGAGTAACGAGCCGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TVSTIRSVRAQGWGPSLTRCQPE*SNEPSP Trigger: TGGGCTCGGCTCGTTACTCCACTCCGGTTGACATCT...AGTCAGGGAAGGTCCCCAGCCCTGAGCCCTGACGCTCCTGATTGTAGAGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| CDS-3UTR TCA 90 bp | GGCAGCCTCGCTAGTGCTGAGAGCCTTTCCAGCAAAATGCTCCAGCATCTGAGAGGTTTCAAGTCTCTGTaGAGAACTCGCCGGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GSLASAESLSSKMLQHLRGFKSL*RTRREW Trigger: CCACTCCCGGCGAGTTCTTCACAGAGACTTGAAACC...TCTCAGATGCTGGAGCATTTTGCTGGAAAGGCTCTCAGCACTAGCGAGGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CAA 72 bp | AGATCGTTTGGGGGACTCCTCAGACCCAAGCAGGATTaGAACCCTCAAAGCCGCCAACTCTTCAGCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RSFGGLLRPKQD*NPQSRQLFSRP Trigger: AGGCCTGCTGAAGAGTTGGCGGCTTTGAGGGTTCAAATCCTGCTTGGGTCTGAGGAGTCCCCCAAACGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| 3UTR CAA 72 bp | CAGCCCCTGATCTCTAGCTGTGAAACCCAGCCAGCTTaGGTGCACTTCCATCTGGGGGTCATTACTCTAGAC | + |
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Preference number: 4 (lower is better) Translates to: QPLISSCETQPA*VHFHLGVITLD Trigger: GTCTAGAGTAATGACCCCCAGATGGAAGTGCACCAAAGCTGGCTGGGTTTCACAGCTAGAGATCAGGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR TCA 90 bp | AGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCCCCGAGCTGGTCAATCTCTaGGTCGCCGTGGAAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RKLYKTGREPTVNNTIFPELVNL*VAVEKR Trigger: CCGCTTTTCCACGGCGACTCAGAGATTGACCAGCTC...GGGGAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR TCA 90 bp | GAAACTGACCAGGAATCATATATATCCAGAACACGGAGGCACTTGAAAGCATCAGAGCTGGTCAATCTCTaGGTCGCCGTGGAAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ETDQESYISRTRRHLKASELVNL*VAVEKR Trigger: CCGCTTTTCCACGGCGACTCAGAGATTGACCAGCTC...TGATGCTTTCAAGTGCCTCCGTGTTCTGGATATATATGATTCCTGGTCAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR CCA 90 bp | AGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCCCCCCCGAATTGCAGTACTaGGCACTCCTTCTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLYKTGREPTVNNTIFPPELQY*ALLLPR Trigger: GCGAGGAAGAAGGAGTGCCCAGTACTGCAATTCGGG...GGGGAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR TCA 90 bp | AAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCCCCTAGGTTTCAAGTCTCTGTaGAGAACTCGCCGGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTIQDRKRANGKQHDLPLGFKSL*RTRREW Trigger: CCACTCCCGGCGAGTTCTTCACAGAGACTTGAAACC...TAGGGGAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCCCCTAGAAGAATCCATGAACTaGCCAGGAGGGATGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTIQDRKRANGKQHDLPLEESMN*PGGMES Trigger: GGACTCCATCCCTCCTGGGCAGTTCATGGATTCTTC...TAGGGGAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CCA 90 bp | AGACTGATGTTGGTTAAACGTGTCTTATTCTGTGTTCTGGGAAATGCTCATCTCCCCGAATTGCAGTACTaGGCACTCCTTCTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLMLVKRVLFCVLGNAHLPELQY*ALLLPR Trigger: GCGAGGAAGAAGGAGTGCCCAGTACTGCAATTCGGG...GAGATGAGCATTTCCCAGAACACAGAATAAGACACGTTTAACCAACATCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTACAGCCTGGAGTCCTaGATGAGCACATCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQRKLYKTGREPTVNNTIYSLES*MSTSCR Trigger: CCTGCAGGATGTGCTCATGCAGGACTCCAGGCTGTA...GATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR GCA 90 bp | AGACTGATGTTGGTTAAACGTGTCTTATTCTGTGTTCTGGGAAATGCTCATCTCGAAGAATCCATGAACTaGCCAGGAGGGATGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLMLVKRVLFCVLGNAHLEESMN*PGGMES Trigger: GGACTCCATCCCTCCTGGGCAGTTCATGGATTCTTC...GAGATGAGCATTTCCCAGAACACAGAATAAGACACGTTTAACCAACATCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCAGATGTCAACCGGAGTaGAGTAACGAGCCGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQRKLYKTGREPTVNNTIRCQPE*SNEPSP Trigger: TGGGCTCGGCTCGTTACTCCACTCCGGTTGACATCT...GATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCCCCAAAGCGGCTTCTTGGTaGCCAGTTCTGCAAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: RKLYKTGREPTVNNTIFPKAASW*PVLQIW Trigger: CCATATTTGCAGAACTGGCCACCAAGAAGCCGCTTT...GGGGAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCCCCTATCCCCGGCTTCCACTTaGGAAAGGTGTTCTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KTIQDRKRANGKQHDLPLSPAST*ERCSCS Trigger: ACTACAAGAACACCTTTCCCAAGTGGAAGCCGGGGA...TAGGGGAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| 3UTR CAA 72 bp | GAGCTTGTCACAGTCCGCTGGGGTTACAGACTGATGTaGGTTAAACGTGTCTTATTCTGTGTTCTGGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELVTVRWGYRLM*VKRVLFCVLGN Trigger: ATTTCCCAGAACACAGAATAAGACACGTTTAACCAACATCAGTCTGTAACCCCAGCGGACTGTGACAAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCGCTTCAGGGCCATTTTaGCAGAGATTCGTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRKLYKTGREPTVNNTIFASGPF*QRFVWQ Trigger: CTGCCAAACGAATCTCTGGCAAAATGGCCCTGAAGC...GAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCCCCTATTCATGGCCACTATCTaGCCAGTGACTCTGTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KTIQDRKRANGKQHDLPLFMATI*PVTLCL Trigger: TAGACACAGAGTCACTGGCCAGATAGTGGCCATGAA...TAGGGGAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCCCCTAAAAGCGGCTTCTTGGTaGCCAGTTCTGCAAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: KTIQDRKRANGKQHDLPLKAASW*PVLQIW Trigger: CCATATTTGCAGAACTGGCCACCAAGAAGCCGCTTT...TAGGGGAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCAAGATCCTGAAGAGCTaGTCAATCTCTGAGTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QRKLYKTGREPTVNNTIFKILKS*SISESP Trigger: CGGCGACTCAGAGATTGACCAGCTCTTCAGGATCTT...GAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| 3UTR CAA 72 bp | ATCCTTTTATTCCGTGCCATTAGGCACATTAAATTATaGAGTCGTCCCTGTCTTGGGACATGCTGGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLFRAIRHIKL*SRPCLGTCWIP Trigger: TGGGATCCAGCATGTCCCAAGACAGGGACGACTCAATAATTTAATGTGCCTAATGGCACGGAATAAAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCCCTCGCTTTCAAGTCTaGTCTTCTTCATGGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: QRKLYKTGREPTVNNTIFPRFQV*SSSWPL Trigger: TAGTGGCCATGAAGAAGATCAGACTTGAAAGCGAGG...GAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR TCA 90 bp | ATAAGTCAGGCTGCTTCTAAGAATTACACTAAGCAGCACAGCGATACGGCTCCTCGAAATCAGCCAGTTTaGTTGTTCCTTTGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISQAASKNYTKQHSDTAPRNQPV*LFLCHQ Trigger: TTGATGACAAAGGAACAATCAAACTGGCTGATTTCG...AGGAGCCGTATCGCTGTGCTGCTTAGTGTAATTCTTAGAAGCAGCCTGACTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR GCA 90 bp | AGACTGATGTTGGTTAAACGTGTCTTATTCTGTGTTCTGGGAAATGCTCATCTCAGAGATTTCCCGAATTaGAGTACTGGGCACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLMLVKRVLFCVLGNAHLRDFPN*STGHSF Trigger: GAAGGAGTGCCCAGTACTGCAATTCGGGAAATCTCT...GAGATGAGCATTTCCCAGAACACAGAATAAGACACGTTTAACCAACATCAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR GCA 90 bp | GAAACTGACCAGGAATCATATATATCCAGAACACGGAGGCACTTGAAAGCATCATGCATGAGCACATCCTaGAGGCTGACTATATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETDQESYISRTRRHLKASCMSTS*RLTIFG Trigger: TCCAAATATAGTCAGCCTGCAGGATGTGCTCATGCA...TGATGCTTTCAAGTGCCTCCGTGTTCTGGATATATATGATTCCTGGTCAGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR GCA 90 bp | AGACTGATGTTGGTTAAACGTGTCTTATTCTGTGTTCTGGGAAATGCTCATCTCTCATCAAAGTACGGGTaGTTCAGGGCCATTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLMLVKRVLFCVLGNAHLSSKYG*FRAILP Trigger: TGGCAAAATGGCCCTGAAGCACCCGTACTTTGATGA...GAGATGAGCATTTCCCAGAACACAGAATAAGACACGTTTAACCAACATCAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCTCATCAAAGTACGGGTaGTTCAGGGCCATTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRKLYKTGREPTVNNTIFSSKYG*FRAILP Trigger: TGGCAAAATGGCCCTGAAGCACCCGTACTTTGATGA...GAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCAGAGATTTCCCGAATTaGAGTACTGGGCACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQRKLYKTGREPTVNNTIRDFPN*STGHSF Trigger: GAAGGAGTGCCCAGTACTGCAATTCGGGAAATCTCT...GATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| 3UTR CAA 72 bp | GCTACCTCATTCCTTCTGAATACAAAGTACCAACAGTaGTTAGCTGTCAAACCAGTGCAACGGCTTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ATSFLLNTKYQQ*LAVKPVQRLLL Trigger: TAACAAAAGCCGTTGCACTGGTTTGACAGCTAACAACTGTTGGTACTTTGTATTCAGAAGGAATGAGGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTGCATGAGCACATCCTaGAGGCTGACTATATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQRKLYKTGREPTVNNTICMSTS*RLTIFG Trigger: TCCAAATATAGTCAGCCTGCAGGATGTGCTCATGCA...GATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR GCA 90 bp | ACTACACAGAACTTGCCTAGGACTAAATCTTGTCCATTTCAAGAGTTTTCTAAAGCTTCAGGGCCATTTTaGCAGAGATTCGTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTQNLPRTKSCPFQEFSKASGPF*QRFVWQ Trigger: CTGCCAAACGAATCTCTGGCAAAATGGCCCTGAAGC...TTTAGAAAACTCTTGAAATGGACAAGATTTAGTCCTAGGCAAGTTCTGTGTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR CCA 90 bp | ACTACACAGAACTTGCCTAGGACTAAATCTTGTCCATTTCAAGAGTTTTCTAAATCCCCGGCTTCCACTTaGGAAAGGTGTTCTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTQNLPRTKSCPFQEFSKSPAST*ERCSCS Trigger: ACTACAAGAACACCTTTCCCAAGTGGAAGCCGGGGA...TTTAGAAAACTCTTGAAATGGACAAGATTTAGTCCTAGGCAAGTTCTGTGTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR TCA 90 bp | ACTACACAGAACTTGCCTAGGACTAAATCTTGTCCATTTCAAGAGTTTTCTAAACCTCGCTTTCAAGTCTaGTCTTCTTCATGGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: TTQNLPRTKSCPFQEFSKPRFQV*SSSWPL Trigger: TAGTGGCCATGAAGAAGATCAGACTTGAAAGCGAGG...TTTAGAAAACTCTTGAAATGGACAAGATTTAGTCCTAGGCAAGTTCTGTGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGCCAGAAAGCCCAAGTTCCATTTCCAACTGCTGCTTAAGCCTGTGGCCTTCTCGTCCAGGTTCTaGACGTGGGATGCGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGARKPKFHFQLLLKPVAFSSRF*TWDARL Trigger: GAGCCTCGCATCCCACGTCAAGAACCTGGACGAGAA...GGCCACAGGCTTAAGCAGCAGTTGGAAATGGAACTTGGGCTTTCTGGCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS CCA 90 bp | AGTCGCCGTGGAAAAGCGGCTTCTTGGTGGCCAGTTCTGCAAATATaGTCCCTATACTCCAGATGTCAACCGGAGTGGAGTAACGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRRGKAASWWPVLQI*SLYSRCQPEWSNEP Trigger: CGGCTCGTTACTCCACTCCGGTTGACATCTGGAGTATAGGGACCATATTTGCAGAACTGGCCACCAAGAAGCCGCTTTTCCACGGCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS CCA 90 bp | ACTTCGTTGTTAGGAGTGCCCAGAGCTCTGAAGATCCTGAAGAGCTaGTCAATCTCTGAGTCGCCGTGGAAAAGCGGCTTCTTGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSLLGVPRALKILKS*SISESPWKSGFLVA Trigger: GGCCACCAAGAAGCCGCTTTTCCACGGCGACTCAGAGATTGACCAGCTCTTCAGGATCTTCAGAGCTCTGGGCACTCCTAACAACGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS CCA 90 bp | CCAGTTCTGCAAATATGGTCCCTATACTCCAGATGTCAACCGGAGTaGAGTAACGAGCCGAGCCCAGCAACACTTCTGGAGATCGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: PVLQIWSLYSRCQPE*SNEPSPATLLEIGT Trigger: GGTACCGATCTCCAGAAGTGTTGCTGGGCTCGGCTCGTTACTCCACTCCGGTTGACATCTGGAGTATAGGGACCATATTTGCAGAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 ENSMUST00000152448.2 |
||
| CDS CCA 90 bp | ATTTTTGAGAGCAAATCCAAGCCGTTCTCGTCCAGGTTCTTGACGTaGGATGCGAGGCTCCCCGGCTTCCACTTGGGAAAGGTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IFESKSKPFSSRFLT*DARLPGFHLGKVFL Trigger: CAAGAACACCTTTCCCAAGTGGAAGCCGGGGAGCCTCGCATCCCACGTCAAGAACCTGGACGAGAACGGCTTGGATTTGCTCTCAAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS CCA 90 bp | AGAGCTGGTCAATCTCTGAGTCGCCGTGGAAAAGCGGCTTCTTGGTaGCCAGTTCTGCAAATATGGTCCCTATACTCCAGATGTCAACCG | + |
|
Preference number: 5 (lower is better) Translates to: RAGQSLSRRGKAASW*PVLQIWSLYSRCQP Trigger: CGGTTGACATCTGGAGTATAGGGACCATATTTGCAGAACTGGCCACCAAGAAGCCGCTTTTCCACGGCGACTCAGAGATTGACCAGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CAA 90 bp | TGTTGGTTAAACGTGTCTTATTCTGTGTTCTGGGAAATGCTCATCTCTTCGTGCTCTGGCCACACTTCGTaGTTAGGAGTGCCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CWLNVSYSVFWEMLISSCSGHTS*LGVPRA Trigger: AGCTCTGGGCACTCCTAACAACGAAGTGTGGCCAGA...GCACGAAGAGATGAGCATTTCCCAGAACACAGAATAAGACACGTTTAACCAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS CCA 90 bp | CATCAAAGTACGGGTGCTTCAGGGCCATTTTGCCAGAGATTCGTTTaGCAGGATCATAGACTAGCATTTTTGAGAGCAAATCCAAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: HQSTGASGPFCQRFV*QDHRLAFLRANPSR Trigger: ACGGCTTGGATTTGCTCTCAAAAATGCTAGTCTATGATCCTGCCAAACGAATCTCTGGCAAAATGGCCCTGAAGCACCCGTACTTTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCTCGTCCAGGTTCTaGACGTGGGATGCGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KQRKLYKTGREPTVNNTIFSSRF*TWDARL Trigger: GAGCCTCGCATCCCACGTCAAGAACCTGGACGAGAA...GATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCGAGTCCAGGTACTTCTaGAGGTCCATGGACAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QRKLYKTGREPTVNNTIFESRYF*RSMDRN Trigger: GTTCCTGTCCATGGACCTCAAGAAGTACCTGGACTC...GAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTCTGGCCACACTTCGTaGTTAGGAGTGCCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KQRKLYKTGREPTVNNTISGHTS*LGVPRA Trigger: AGCTCTGGGCACTCCTAACAACGAAGTGTGGCCAGA...GATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CAA 90 bp | TTATTCTGTGTTCTGGGAAATGCTCATCTCTTCGTGCTAACTCACTTTCCCTCATGCTTCAGGGCCATTTaGCCAGAGATTCGTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LFCVLGNAHLFVLTHFPSCFRAI*PEIRLA Trigger: TGCCAAACGAATCTCTGGCAAAATGGCCCTGAAGCA...TGAGGGAAAGTGAGTTAGCACGAAGAGATGAGCATTTCCCAGAACACAGAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
||
| CDS GCA 90 bp | TCTGATTGTCCAAGTCATCAAAGTACGGGTGCTTCAGGGCCATTTTaGCAGAGATTCGTTTGGCAGGATCATAGACTAGCATTTTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SDCPSHQSTGASGPF*QRFVWQDHRLAFLR Trigger: TCTCAAAAATGCTAGTCTATGATCCTGCCAAACGAATCTCTGGCAAAATGGCCCTGAAGCACCCGTACTTTGATGACTTGGACAATCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTGCTTCAGGGCCATTTaGCCAGAGATTCGTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KQRKLYKTGREPTVNNTICFRAI*PEIRLA Trigger: TGCCAAACGAATCTCTGGCAAAATGGCCCTGAAGCA...GATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CAA 90 bp | AAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCTTCCCCTACATAGACTAGCATTTTaGAGAGCAAATCCAAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: KTIQDRKRANGKQHDLPLHRLAF*RANPSR Trigger: ACGGCTTGGATTTGCTCTCAAAAATGCTAGTCTATG...TAGGGGAAGATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCCCGAAATCAGCCAGTTaGATTGTTCCTTTGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: KQRKLYKTGREPTVNNTIPKSAS*IVPLSS Trigger: TGATGACAAAGGAACAATCAAACTGGCTGATTTCGG...GATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
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| CDS-3UTR CAA 90 bp | AAACAAAGAAAACTATACAAGACAGGAAGAGAGCCAACGGTAAACAACACGATCCATAGACTAGCATTTTaGAGAGCAAATCCAAGCCGT | + |
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Preference number: 5 (lower is better) Translates to: KQRKLYKTGREPTVNNTIHRLAF*RANPSR Trigger: ACGGCTTGGATTTGCTCTCAAAAATGCTAGTCTATG...GATCGTGTTGTTTACCGTTGGCTCTCTTCCTGTCTTGTATAGTTTTCTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
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| CDS-3UTR CAA 90 bp | ACTACACAGAACTTGCCTAGGACTAAATCTTGTCCATTTCAAGAGTTTTCTAAACCGAAATCAGCCAGTTaGATTGTTCCTTTGTCATCA | + |
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Preference number: 5 (lower is better) Translates to: TTQNLPRTKSCPFQEFSKPKSAS*IVPLSS Trigger: TGATGACAAAGGAACAATCAAACTGGCTGATTTCGG...TTTAGAAAACTCTTGAAATGGACAAGATTTAGTCCTAGGCAAGTTCTGTGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020099.13 |
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| CDS CAA 72 bp | TTTGAGAGCAAATCCAAGCCGTTCTCGTCCAGGTTCTaGACGTGGGATGCGAGGCTCCCCGGCTTCCACTTG | + |
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Preference number: 6 (lower is better) Translates to: FESKSKPFSSRF*TWDARLPGFHL Trigger: CAAGTGGAAGCCGGGGAGCCTCGCATCCCACGTCAAGAACCTGGACGAGAACGGCTTGGATTTGCTCTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
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| CDS CAA 90 bp | ACTAGCATTTTTGAGAGCAAATCCAAGCCGTTCTCGTCCAGGTTCTaGACGTGGGATGCGAGGCTCCCCGGCTTCCACTTGGGAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: TSIFESKSKPFSSRF*TWDARLPGFHLGKV Trigger: CACCTTTCCCAAGTGGAAGCCGGGGAGCCTCGCATCCCACGTCAAGAACCTGGACGAGAACGGCTTGGATTTGCTCTCAAAAATGCTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
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| CDS GCA 72 bp | GTCGCCGTGGAAAAGCGGCTTCTTGGTGGCCAGTTCTaGAAATATGGTCCCTATACTCCAGATGTCAACCGG | + |
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Preference number: 6 (lower is better) Translates to: VAVEKRLLGGQF*KYGPYTPDVNR Trigger: CCGGTTGACATCTGGAGTATAGGGACCATATTTGCAGAACTGGCCACCAAGAAGCCGCTTTTCCACGGCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
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| CDS CCA 72 bp | CAAATATGGTCCCTATACTCCAGATGTCAACCGGAGTaGAGTAACGAGCCGAGCCCAGCAACACTTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: QIWSLYSRCQPE*SNEPSPATLLE Trigger: CTCCAGAAGTGTTGCTGGGCTCGGCTCGTTACTCCACTCCGGTTGACATCTGGAGTATAGGGACCATATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 ENSMUST00000152448.2 |
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| CDS CCA 72 bp | GGTCAATCTCTGAGTCGCCGTGGAAAAGCGGCTTCTTaGTGGCCAGTTCTGCAAATATGGTCCCTATACTCC | + |
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Preference number: 6 (lower is better) Translates to: GQSLSRRGKAAS*WPVLQIWSLYS Trigger: GGAGTATAGGGACCATATTTGCAGAACTGGCCACCAAGAAGCCGCTTTTCCACGGCGACTCAGAGATTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
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| CDS CCA 72 bp | CAATCTCTGAGTCGCCGTGGAAAAGCGGCTTCTTGGTaGCCAGTTCTGCAAATATGGTCCCTATACTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QSLSRRGKAASW*PVLQIWSLYSR Trigger: TCTGGAGTATAGGGACCATATTTGCAGAACTGGCCACCAAGAAGCCGCTTTTCCACGGCGACTCAGAGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
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| CDS CAA 72 bp | TGGTCAATCTCTGAGTCGCCGTGGAAAAGCGGCTTCTaGGTGGCCAGTTCTGCAAATATGGTCCCTATACTC | + |
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Preference number: 6 (lower is better) Translates to: WSISESPWKSGF*VASSANMVPIL Trigger: GAGTATAGGGACCATATTTGCAGAACTGGCCACCAAGAAGCCGCTTTTCCACGGCGACTCAGAGATTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
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| CDS CCA 72 bp | ACGGGTGCTTCAGGGCCATTTTGCCAGAGATTCGTTTaGCAGGATCATAGACTAGCATTTTTGAGAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: TGASGPFCQRFV*QDHRLAFLRAN Trigger: ATTTGCTCTCAAAAATGCTAGTCTATGATCCTGCCAAACGAATCTCTGGCAAAATGGCCCTGAAGCACCCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020099.13 ENSMUST00000119827.8 |
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