Pregenerated sensors for CDIPT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030682Ensembl transcript IDs: ENSMUST00000032920.5, ENSMUST00000205830.2, ENSMUST00000206170.2, ENSMUST00000206346.2, ENSMUST00000206450.2, ENSMUST00000206780.2, ENSMUST00000206794.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAAAGTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTaGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PKVSLQTPGLRQQDV*QHPVFSQASRSTSW Trigger: CCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACTTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| 3UTR CCA 90 bp | CCAGGGCAGGTGGACAGCTGGGGATGGGAGAGGATCATTTCTTCTTaGCGCGGTCTGCTGCATCCAGGGCAGCCATGTTTCTTGCAGCCG | + |
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Preference number: 1 (lower is better) Translates to: PGQVDSWGWERIISS*RGLLHPGQPCFLQP Trigger: CGGCTGCAAGAAACATGGCTGCCCTGGATGCAGCAGACCGCGCCAAGAAGAAATGATCCTCTCCCATCCCCAGCTGTCCACCTGCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR CCA 90 bp | GTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATaGGAGAGGATCATTTCTTCTTGGCGCGGTCTGCTGCATCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: VTWYSRYPGQVDSWG*ERIISSWRGLLHPG Trigger: CCCTGGATGCAGCAGACCGCGCCAAGAAGAAATGATCCTCTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR TCA 90 bp | CTTTGCCCTCACATGTCCCCAAAGTCTCACTCCAGACCCCAGGACTaGGGCAGCAGGATGTGTGGCAACACCCAGTCTTCAGTCAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: LCPHMSPKSHSRPQD*GSRMCGNTQSSVRP Trigger: AGGCCTGACTGAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACTTTGGGGACATGTGAGGGCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| 3UTR GCA 90 bp | TGGACAGCTGGGGATGGGAGAGGATCATTTCTTCTTGGCGCGGTCTaGTGCATCCAGGGCAGCCATGTTTCTTGCAGCCGTGATGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: WTAGDGRGSFLLGAV*CIQGSHVSCSRDEV Trigger: CACCTCATCACGGCTGCAAGAAACATGGCTGCCCTGGATGCAGCAGACCGCGCCAAGAAGAAATGATCCTCTCCCATCCCCAGCTGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR CCA 90 bp | TCTGCTGCATCCAGGGCAGCCATGTTTCTTGCAGCCGTGATGAGGTaGATGACACTAATGACGGACTTGAGCAGCGCGATGGGAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: SAASRAAMFLAAVMR*MTLMTDLSSAMGAV Trigger: CACAGCTCCCATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAACATGGCTGCCCTGGATGCAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR CCA 90 bp | TTAGGAGGAGAGGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTaGACAGCTGGGGATGGGAGAGGATCATTTCTTCTTGGCGCGGTC | + |
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Preference number: 1 (lower is better) Translates to: LGGEESRGTVDTQGR*TAGDGRGSFLLGAV Trigger: GACCGCGCCAAGAAGAAATGATCCTCTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCCTCTCCTCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR CCA 90 bp | GCAGGGCCTCCTGAGCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTaGGGTCACAGGTTGGGTCTAATCATCAGGATTAAAGAGATAGTG | + |
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Preference number: 1 (lower is better) Translates to: AGPPEHPSCLAVPGP*GHRLGLIIRIKEIV Trigger: CACTATCTCTTTAATCCTGATGATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTCAGGAGGCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| 3UTR CCA 90 bp | TGGAACGACAGGGAGGAGCCAGCCACCTTTGGGAAAGCATCCAGGTaGATTCTAATCCAGCTCCCATGGACCCTGGGCCATCATCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: WNDREEPATFGKASR*ILIQLPWTLGHHLR Trigger: TCTTAGATGATGGCCCAGGGTCCATGGGAGCTGGATTAGAATCCACCTGGATGCTTTCCCAAAGGTGGCTGGCTCCTCCCTGTCGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR GCA 90 bp | TTTCTTCTTGGCGCGGTCTGCTGCATCCAGGGCAGCCATGTTTCTTaGAGCCGTGATGAGGTGGATGACACTAATGACGGACTTGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: FLLGAVCCIQGSHVS*SRDEVDDTNDGLEQ Trigger: CTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAACATGGCTGCCCTGGATGCAGCAGACCGCGCCAAGAAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR GCA 90 bp | GAAGCACAGGGTTCCCAGACAGGTCGATCATCTTGTGACTCTCACTaGCTCGCACCACAGAACTTGGGGAGAAAAGCATGGGACTTCATG | + |
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Preference number: 1 (lower is better) Translates to: EAQGSQTGRSSCDSH*LAPQNLGRKAWDFM Trigger: CATGAAGTCCCATGCTTTTCTCCCCAAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCTGTCTGGGAACCCTGTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206794.2 |
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| 3UTR TCA 90 bp | TCCGGAAAAGGCCCACAGAGCCGACTAGTGGTCCCTCGGAGAAATTaGAGAGATACAGGAGGCAGTAGAAGAGTTCATTTCCAGCACACA | + |
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Preference number: 1 (lower is better) Translates to: SGKGPQSRLVVPRRN*RDTGGSRRVHFQHT Trigger: TGTGTGCTGGAAATGAACTCTTCTACTGCCTCCTGTATCTCTTCAATTTCTCCGAGGGACCACTAGTCGGCTCTGTGGGCCTTTTCCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206794.2 |
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| 3UTR CCA 90 bp | TCACATTCTCATGAGGGTAGAAAATATCAAGGTTACAATCAAAAGTaGCCAGCTAGGGACATAAAGCAGGTGGGCAGAGACAATGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: SHSHEGRKYQGYNQK*PARDIKQVGRDNAC Trigger: ACAGGCATTGTCTCTGCCCACCTGCTTTATGTCCCTAGCTGGCCACTTTTGATTGTAACCTTGATATTTTCTACCCTCATGAGAATGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR TCA 90 bp | GTTTTCACTCTAGGCAGAGACAAGAAAGACATAAGTCTGCTCTCATaGAGCTCACATTCTCATGAGGGTAGAAAATATCAAGGTTACAAT | + |
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Preference number: 1 (lower is better) Translates to: VFTLGRDKKDISLLS*SSHSHEGRKYQGYN Trigger: ATTGTAACCTTGATATTTTCTACCCTCATGAGAATGTGAGCTTCATGAGAGCAGACTTATGTCTTTCTTGTCTCTGCCTAGAGTGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGCGCGATGGGAGCTGTaGCCCAGAGGCCCATCCGGA | + |
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Preference number: 2 (lower is better) Translates to: GCVATPSLQSGLPEHQLDARWEL*PRGPSG Trigger: TCCGGATGGGCCTCTGGGTCACAGCTCCCATCGCGC...ATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCCTGCTTCCTGCTTGGCAGTaGCAGGTCCTTGGGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: PSLQSGLPEHQLDGQGLLLPAWQ*QVLGVT Trigger: TGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAG...CAGGAGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR TCA 90 bp | GACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCTTCAGTCAGGCTCCAGACCCCAGGACTaGGGCAGCAGGATGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: DPRTEAAGCVATPSLQSGSRPQD*GSRMCG Trigger: GCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGA...GCCTGACTGAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGCCTGAGCACCCTTCCTaGTTGGCAGTGCCAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: QDVWQHPVFSQASRSTSWPEHPS*LAVPGP Trigger: AGGACCTGGCACTGCCAAGCAGGAAGGGTGCTCAGG...CCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACATCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTGAGCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGGATACCCAGGGCAGGTaGACAGCTGGGGATGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PPEHPSCLAVPGPWGHRLDTQGR*TAGDGR Trigger: TCTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATC...CAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTCAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCCTGGCAGCCGTGATGAGGTaGATGACACTAATGACGGAC | + |
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Preference number: 2 (lower is better) Translates to: PSLQSGLPEHQLDGQGLLAAVMR*MTLMTD Trigger: GTCCGTCATTAGTGTCATCCACCTCATCACGGCTGC...CAGGAGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR CAA 90 bp | CCCAGGGCAGGTGGACAGCTGGGGATGGGAGAGGATCATTTCTTCTaGGCGCGGTCTGCTGCATCCAGGGCAGCCATGTTTCTTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PRAGGQLGMGEDHFF*ARSAASRAAMFLAA Trigger: GGCTGCAAGAAACATGGCTGCCCTGGATGCAGCAGACCGCGCCAAGAAGAAATGATCCTCTCCCATCCCCAGCTGTCCACCTGCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCCGTCCCTCGGAGAAATTaGAGAGATACAGGAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: HPVFSQASRSTSWMGRASVPRRN*RDTGGS Trigger: ACTGCCTCCTGTATCTCTTCAATTTCTCCGAGGGAC...GGAGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCCTTCTTGGCGCGGTCTaGTGCATCCAGGGCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VSLQTPGLRQQDVWQHPVLLGAV*CIQGSH Trigger: ATGGCTGCCCTGGATGCAGCAGACCGCGCCAAGAAG...GACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR GCA 90 bp | GCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGGGTCTAATCCTGAGCACCCTTCCTaGTTGGCAGTGCCAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: APFLLGSARSLGSQVGSNPEHPS*LAVPGP Trigger: AGGACCTGGCACTGCCAAGCAGGAAGGGTGCTCAGG...ATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCTTCAGGTCGATCATCTTGTaGCTCTCACTGCCTCGCACC | + |
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Preference number: 2 (lower is better) Translates to: SLQTPGLRQQDVWQHPVFRSIIL*LSLPRT Trigger: GGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCT...GAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206794.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGCACATGAGAAAGACATaGCACTGGGACCTCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: QDVWQHPVFSQASRSTSWHMRKT*HWDLLG Trigger: TCCTAAGAGGTCCCAGTGTCATGTCTTTCTCATGTG...CCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCTTCGCAGCCGTGATGAGGTaGATGACACTAATGACGGAC | + |
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Preference number: 2 (lower is better) Translates to: SLQTPGLRQQDVWQHPVFAAVMR*MTLMTD Trigger: GTCCGTCATTAGTGTCATCCACCTCATCACGGCTGC...GAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR CAA 90 bp | ATGTTTCTTGCAGCCGTGATGAGGTGGATGACACTAATGACGGACTaGAGCAGCGCGATGGGAGCTGTGACCCAGAGGCCCATCCGGAAA | + |
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Preference number: 2 (lower is better) Translates to: MFLAAVMRWMTLMTD*SSAMGAVTQRPIRK Trigger: TTTCCGGATGGGCCTCTGGGTCACAGCTCCCATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCAAAGTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACACATGAGAAAGACATaGCACTGGGACCTCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PQSLTPDPRTEAAGCVATHMRKT*HWDLLG Trigger: TCCTAAGAGGTCCCAGTGTCATGTCTTTCTCATGTG...TGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACTTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCCCAAAGTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAAAGGTTAGAGAACACATaGGAAAGACATGACACTGGG | + |
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Preference number: 2 (lower is better) Translates to: VPKVSLQTPGLRQQDVWQRLENT*ERHDTG Trigger: CCCAGTGTCATGTCTTTCTCATGTGTTCTCTAACCT...TTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACTTTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR CAA 90 bp | GAGCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTaGGGTCTAATCATCAGGATTAAAGAGATAGTGACAACACCAAAC | + |
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Preference number: 2 (lower is better) Translates to: EHPSCLAVPGPWGHR*GLIIRIKEIVTTPN Trigger: GTTTGGTGTTGTCACTATCTCTTTAATCCTGATGATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCATGTTTCTTGCAGCCGTGATGAGGTGGATGACACTAATGACGGACTTGGTCCCTCGGAGAAATTaGAGAGATACAGGAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: AAMFLAAVMRWMTLMTDLVPRRN*RDTGGS Trigger: ACTGCCTCCTGTATCTCTTCAATTTCTCCGAGGGAC...CAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAACATGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAGCAGCTACCACATGCCAGGCTAGTTTTCACTCTAGGCAGAGACAAGAAAGATACCCAGGGCAGGTaGACAGCTGGGGATGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: IKQLPHARLVFTLGRDKKDTQGR*TAGDGR Trigger: TCTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATC...TTTCTTGTCTCTGCCTAGAGTGAAAACTAGCCTGGCATGTGGTAGCTGCTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGCTACCACATGCCAGGCTAGTTTTCACTCTAGGCAGAGACAAGAAAGACCTAATCCAGCTCCCATaGACCCTGGGCCATCATCTA | + |
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Preference number: 2 (lower is better) Translates to: KQLPHARLVFTLGRDKKDLIQLP*TLGHHL Trigger: TAGATGATGGCCCAGGGTCCATGGGAGCTGGATTAG...GTCTTTCTTGTCTCTGCCTAGAGTGAAAACTAGCCTGGCATGTGGTAGCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTCATGAAGCTCACATTCTCATGAGGGTAGAAAATATCAAGGTTACAATCGGTTACAATCAAAAGTaGCCAGCTAGGGACATAAAG | + |
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Preference number: 2 (lower is better) Translates to: CSHEAHILMRVENIKVTIGYNQK*PARDIK Trigger: CTTTATGTCCCTAGCTGGCCACTTTTGATTGTAACC...GATTGTAACCTTGATATTTTCTACCCTCATGAGAATGTGAGCTTCATGAGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR GCA 72 bp | CCAGCTGGATGGGCAGGGCCTCCTGAGCACCCTTCCTaGTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: PAGWAGPPEHPS*LAVPGPWGHRL Trigger: CAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTCAGGAGGCCCTGCCCATCCAGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCCTGGAGGATCATTTCTTCTaGGCGCGGTCTGCTGCATCC | + |
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Preference number: 3 (lower is better) Translates to: PSLQSGLPEHQLDGQGLLEDHFF*ARSAAS Trigger: GGATGCAGCAGACCGCGCCAAGAAGAAATGATCCTC...CAGGAGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGAGCACCCTTCCTGCTaGGCAGTGCCAGGTCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: SRMCGNTQSSVRPPGAPAEHPSC*AVPGPW Trigger: CCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTC...AGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACATCCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCGCGATGGGAGCTGTGACCCAGAGGCCCATCCGGAAAAGGCCCACAGAGGGTCCCTCGGAGAAATaGAAGAGATACAGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SSAMGAVTQRPIRKRPTEGPSEK*KRYRRQ Trigger: CTGCCTCCTGTATCTCTTCAATTTCTCCGAGGGACC...CTCTGTGGGCCTTTTCCGGATGGGCCTCTGGGTCACAGCTCCCATCGCGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR GCA 72 bp | GGGGATGGGAGAGGATCATTTCTTCTTGGCGCGGTCTaGTGCATCCAGGGCAGCCATGTTTCTTGCAGCCGT | + |
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Preference number: 3 (lower is better) Translates to: GDGRGSFLLGAV*CIQGSHVSCSR Trigger: ACGGCTGCAAGAAACATGGCTGCCCTGGATGCAGCAGACCGCGCCAAGAAGAAATGATCCTCTCCCATCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR CCA 72 bp | AGGGAGGAGCCAGCCACCTTTGGGAAAGCATCCAGGTaGATTCTAATCCAGCTCCCATGGACCCTGGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: REEPATFGKASR*ILIQLPWTLGH Trigger: ATGGCCCAGGGTCCATGGGAGCTGGATTAGAATCCACCTGGATGCTTTCCCAAAGGTGGCTGGCTCCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR TCA 72 bp | CGAAGCACAGGGTTCCCAGACAGGTCGATCATCTTGTaGCTCTCACTGCCTCGCACCACAGAACTTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: RSTGFPDRSIIL*LSLPRTTELGE Trigger: CTCCCCAAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCTGTCTGGGAACCCTGTGCTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206794.2 |
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| 3UTR CCA 72 bp | ATGACACTGGGACCTCTTAGGAGGAGAGGAGTCACGTaGTACAGTAGATACCCAGGGCAGGTGGACAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MTLGPLRRRGVT*YSRYPGQVDSW Trigger: CCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCCTCTCCTCCTAAGAGGTCCCAGTGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCAAAAGTGGCCAGCTAGGGACATAAAGCAGGTGGGCAGAGACAATGCCTGTGAGCACCCTTCCTGCTaGGCAGTGCCAGGTCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: NQKWPARDIKQVGRDNACEHPSC*AVPGPW Trigger: CCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTC...ACAGGCATTGTCTCTGCCCACCTGCTTTATGTCCCTAGCTGGCCACTTTTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| 3UTR CCA 72 bp | TCCAGGGCAGCCATGTTTCTTGCAGCCGTGATGAGGTaGATGACACTAATGACGGACTTGAGCAGCGCGATG | + |
|
Preference number: 3 (lower is better) Translates to: SRAAMFLAAVMR*MTLMTDLSSAM Trigger: CATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAACATGGCTGCCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTTGCAGCCGTGATGAGGTGGATGACACTAATGACGGACTTGAGCAGCGCGCTCGCACCACAGAACTaGGGGAGAAAAGCATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FLAAVMRWMTLMTDLSSALAPQN*GRKAWD Trigger: GTCCCATGCTTTTCTCCCCAAGTTCTGTGGTGCGAG...CGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206794.2 |
||
| 3UTR GCA 72 bp | GGTTCCCAGACAGGTCGATCATCTTGTGACTCTCACTaGCTCGCACCACAGAACTTGGGGAGAAAAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: GSQTGRSSCDSH*LAPQNLGRKAW Trigger: CCATGCTTTTCTCCCCAAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCTGTCTGGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206794.2 |
||
| 3UTR CCA 72 bp | CCTGAGCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTaGGGTCACAGGTTGGGTCTAATCATCAGGATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PEHPSCLAVPGP*GHRLGLIIRIK Trigger: TTTAATCCTGATGATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| 3UTR CCA 72 bp | CATGAGGGTAGAAAATATCAAGGTTACAATCAAAAGTaGCCAGCTAGGGACATAAAGCAGGTGGGCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: HEGRKYQGYNQK*PARDIKQVGRD Trigger: GTCTCTGCCCACCTGCTTTATGTCCCTAGCTGGCCACTTTTGATTGTAACCTTGATATTTTCTACCCTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | CACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCCAGAGCAGGGCCAGGTTaGCCAAGAGACACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPVFSQASRSTSWMGRASRAGPG*PRDTWW Trigger: CCACCATGTGTCTCTTGGTCAACCTGGCCCTGCTCT...GGAGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | CACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCCCGTCCAAGCTCATGCTaGGCTGGAAGAGAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPVFSQASRSTSWMGRASRPSSC*AGREGW Trigger: CCACCCTTCTCTTCCAGCTCAGCATGAGCTTGGACG...GGAGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGGGAGGCGCGATGGGAGCTGTaGCCCAGAGGCCCATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVTWYSRYPGQVDSWGWEARWEL*PRGPSG Trigger: TCCGGATGGGCCTCTGGGTCACAGCTCCCATCGCGC...CTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCGCGATGGGAGCTGTaGCCCAGAGGCCCATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: MCGNTQSSVRPPGAPAGWARWEL*PRGPSG Trigger: TCCGGATGGGCCTCTGGGTCACAGCTCCCATCGCGC...CCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000206450.2 |
||
| CDS-3UTR CCA 90 bp | CAGCGCGATGGGAGCTGTGACCCAGAGGCCCATCCGGAAAAGGCCCACAGAGCCGAGAAGGGTGGCTCGTaGGTAGAGCAGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QRDGSCDPEAHPEKAHRAEKGGS*VEQGQV Trigger: AACCTGGCCCTGCTCTACCCACGAGCCACCCTTCTC...GGCTCTGTGGGCCTTTTCCGGATGGGCCTCTGGGTCACAGCTCCCATCGCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCGAGAAGGGTGGCTCGTaGGTAGAGCAGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QHPVFSQASRSTSWMGRAEKGGS*VEQGQV Trigger: AACCTGGCCCTGCTCTACCCACGAGCCACCCTTCTC...GGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCGCTGGAAGAGAAGGGTaGCTCGTGGGTAGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHPVFSQASRSTSWMGRAAGREG*LVGRAG Trigger: CCCTGCTCTACCCACGAGCCACCCTTCTCTTCCAGC...GGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCCTGAGCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGGCTGGAAGAGAAGGGTaGCTCGTGGGTAGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPPEHPSCLAVPGPWGHRAGREG*LVGRAG Trigger: CCCTGCTCTACCCACGAGCCACCCTTCTCTTCCAGC...CCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTCAGGAGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR GCA 90 bp | AACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCTTGGCGCGGTCTGCTaGATCCAGGGCAGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTQSSVRPPGAPAGWAGPLGAVC*IQGSHV Trigger: AACATGGCTGCCCTGGATGCAGCAGACCGCGCCAAG...AGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000206450.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCCTCCAAGAGACACATGGTaGCGCAACGGTCCGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQSSVRPPGAPAGWAGPPPRDTW*RNGPSA Trigger: TGCTGACGGACCGTTGCGCCACCATGTGTCTCTTGG...AGGAGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | ACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCCTAGGTCGATCATCTTGTaGCTCTCACTGCCTCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TQSSVRPPGAPAGWAGPPRSIIL*LSLPRT Trigger: GGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCT...AGGAGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 |
||
| CDS-3UTR CCA 90 bp | GACGGACTTGAGCAGCGCGATGGGAGCTGTGACCCAGAGGCCCATCCGGAAAAGGAGAAGGGTGGCTCGTaGGTAGAGCAGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DGLEQRDGSCDPEAHPEKEKGGS*VEQGQV Trigger: AACCTGGCCCTGCTCTACCCACGAGCCACCCTTCTC...CTTTTCCGGATGGGCCTCTGGGTCACAGCTCCCATCGCGCTGCTCAAGTCCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCCAAGCTCATGCTGAGCTaGAAGAGAAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HPVFSQASRSTSWMGRASKLMLS*KRRVAR Trigger: ACGAGCCACCCTTCTCTTCCAGCTCAGCATGAGCTT...GGAGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCTCCTGAAGCTCATGCTGAGCTaGAAGAGAAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLQSGLPEHQLDGQGLLKLMLS*KRRVAR Trigger: ACGAGCCACCCTTCTCTTCCAGCTCAGCATGAGCTT...CAGGAGGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCTGAGCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGCGTCCAAGCTCATGCTaGGCTGGAAGAGAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPEHPSCLAVPGPWGHRLRPSSC*AGREGW Trigger: CCACCCTTCTCTTCCAGCTCAGCATGAGCTTGGACG...CAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTCAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGGGTCTAATCATCAGGATGCGCGATGGGAGCTGTaGCCCAGAGGCCCATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGSARSLGSQVGSNHQDARWEL*PRGPSG Trigger: TCCGGATGGGCCTCTGGGTCACAGCTCCCATCGCGC...ATCCTGATGATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000206450.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGGGAGCTTCTTGGCGCGGTCTaGTGCATCCAGGGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVTWYSRYPGQVDSWGWELLGAV*CIQGSH Trigger: ATGGCTGCCCTGGATGCAGCAGACCGCGCCAAGAAG...CTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCTTCAGTCAGGCCCTTCTTGGCGCGGTCTaGTGCATCCAGGGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPGLRQQDVWQHPVFSQALLGAV*CIQGSH Trigger: ATGGCTGCCCTGGATGCAGCAGACCGCGCCAAGAAG...GGCCTGACTGAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000206450.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCTCCTGAGCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACATCAGCATGTCGAGCATaGCCCCAAACCGGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGLLSTLPAWQCQVLGVTSACRA*PQTGFL Trigger: AAGGAACCCGGTTTGGGGCCATGCTCGACATGCTGA...TGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTCAGGAGGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGAGAAGGGTGGCTCGTaGGTAGAGCAGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MCGNTQSSVRPPGAPAGWEKGGS*VEQGQV Trigger: AACCTGGCCCTGCTCTACCCACGAGCCACCCTTCTC...CCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGAGAAGGGTGGCTCGTaGGTAGAGCAGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRMCGNTQSSVRPPGAPAEKGGS*VEQGQV Trigger: AACCTGGCCCTGCTCTACCCACGAGCCACCCTTCTC...AGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACATCCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCGCTGGAAGAGAAGGGTaGCTCGTGGGTAGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRTEAAGCVATPSLQSGLAGREG*LVGRAG Trigger: CCCTGCTCTACCCACGAGCCACCCTTCTCTTCCAGC...GAGGCCTGACTGAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| 3UTR CAA 72 bp | GCAGCCGTGATGAGGTGGATGACACTAATGACGGACTaGAGCAGCGCGATGGGAGCTGTGACCCAGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAVMRWMTLMTD*SSAMGAVTQRP Trigger: GGGCCTCTGGGTCACAGCTCCCATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | AATGACGGACTTGAGCAGCGCGATGGGAGCTGTGACCCAGAGGCCCATCCGGAAAGAGCAGGGCCAGGTTaGCCAAGAGACACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NDGLEQRDGSCDPEAHPERAGPG*PRDTWW Trigger: CCACCATGTGTCTCTTGGTCAACCTGGCCCTGCTCT...TTCCGGATGGGCCTCTGGGTCACAGCTCCCATCGCGCTGCTCAAGTCCGTCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGGGAGCGTCCAAGCTCATGCTaGGCTGGAAGAGAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVTWYSRYPGQVDSWGWERPSSC*AGREGW Trigger: CCACCCTTCTCTTCCAGCTCAGCATGAGCTTGGACG...CTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | GACGGACTTGAGCAGCGCGATGGGAGCTGTGACCCAGAGGCCCATCCGGAAAAGAGGTCGATCATCTTGTaGCTCTCACTGCCTCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DGLEQRDGSCDPEAHPEKRSIIL*LSLPRT Trigger: GGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCT...CTTTTCCGGATGGGCCTCTGGGTCACAGCTCCCATCGCGCTGCTCAAGTCCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 |
||
| CDS-3UTR TCA 90 bp | CAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGGCAGGGCCGTCCCTCGGAGAAATTaGAGAGATACAGGAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHPVFSQASRSTSWMGRAVPRRN*RDTGGS Trigger: ACTGCCTCCTGTATCTCTTCAATTTCTCCGAGGGAC...GGCCCTGCCCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032920.5 |
||
| CDS-3UTR GCA 90 bp | CCCCAAAGTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACTTGGCGCGGTCTGCTaGATCCAGGGCAGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQSLTPDPRTEAAGCVATLGAVC*IQGSHV Trigger: AACATGGCTGCCCTGGATGCAGCAGACCGCGCCAAG...TGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACTTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000206450.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGGGAGCCAAGAGACACATGGTaGCGCAACGGTCCGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVTWYSRYPGQVDSWGWEPRDTW*RNGPSA Trigger: TGCTGACGGACCGTTGCGCCACCATGTGTCTCTTGG...CTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCCCAAGAGACACATGGTaGCGCAACGGTCCGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLQTPGLRQQDVWQHPVPRDTW*RNGPSA Trigger: TGCTGACGGACCGTTGCGCCACCATGTGTCTCTTGG...GACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGGGAGAAGGGTGGCTCGTaGGTAGAGCAGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGVTWYSRYPGQVDSWGWEKGGS*VEQGQV Trigger: AACCTGGCCCTGCTCTACCCACGAGCCACCCTTCTC...CCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | GACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCTTCAGTCAGGCGATGCAGCCAGTGACTaGCCACGTCCAAGCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: DPRTEAAGCVATPSLQSGDAASD*PRPSSC Trigger: GCATGAGCTTGGACGTGGCCAGTCACTGGCTGCATC...GCCTGACTGAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGGGAGGATGCAGCCAGTGACTaGCCACGTCCAAGCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GVTWYSRYPGQVDSWGWEDAASD*PRPSSC Trigger: GCATGAGCTTGGACGTGGCCAGTCACTGGCTGCATC...CTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | GCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGGGTCTAATGATACCCAGGGCAGGTaGACAGCTGGGGATGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: APFLLGSARSLGSQVGSNDTQGR*TAGDGR Trigger: TCTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATC...ATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206450.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGGAGAGCAGGGCCAGGTTaGCCAAGAGACACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGVTWYSRYPGQVDSWGWRAGPG*PRDTWW Trigger: CCACCATGTGTCTCTTGGTCAACCTGGCCCTGCTCT...CCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | CCCCAAAGTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACAAGAGCAGGGCCAGGTTaGCCAAGAGACACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQSLTPDPRTEAAGCVATRAGPG*PRDTWW Trigger: CCACCATGTGTCTCTTGGTCAACCTGGCCCTGCTCT...TGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACTTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCTTCAGTAGAGCAGGGCCAGGTTaGCCAAGAGACACATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQTPGLRQQDVWQHPVFSRAGPG*PRDTWW Trigger: CCACCATGTGTCTCTTGGTCAACCTGGCCCTGCTCT...ACTGAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CACTGGGACCTCTTAGGAGGAGAGGAGTCACGTGGTACAGTAGATACCCAGGGCGCTGGAAGAGAAGGGTaGCTCGTGGGTAGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HWDLLGGEESRGTVDTQGAGREG*LVGRAG Trigger: CCCTGCTCTACCCACGAGCCACCCTTCTCTTCCAGC...GCCCTGGGTATCTACTGTACCACGTGACTCCTCTCCTCCTAAGAGGTCCCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCGTGATGAGGTGGATGACACTAATGACGGACTTGAGCAGCGCGATGGGGCTGGAAGAGAAGGGTaGCTCGTGGGTAGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSRDEVDDTNDGLEQRDGAGREG*LVGRAG Trigger: CCCTGCTCTACCCACGAGCCACCCTTCTCTTCCAGC...CCCATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCTTCAGTGATGCAGCCAGTGACTaGCCACGTCCAAGCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LQTPGLRQQDVWQHPVFSDAASD*PRPSSC Trigger: GCATGAGCTTGGACGTGGCCAGTCACTGGCTGCATC...ACTGAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGATGCAGCCAGTGACTaGCCACGTCCAAGCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GEESRGTVDTQGRWTAGDDAASD*PRPSSC Trigger: GCATGAGCTTGGACGTGGCCAGTCACTGGCTGCATC...ATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGATGACACTAATGACGGACTTGAGCAGCGCGATGGGAGCTGTGACCCACGTCCAAGCTCATGCTaGGCTGGAAGAGAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVDDTNDGLEQRDGSCDPRPSSC*AGREGW Trigger: CCACCCTTCTCTTCCAGCTCAGCATGAGCTTGGACG...TGGGTCACAGCTCCCATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | GTCCCCAAAGTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAAAGGTCGATCATCTTGTaGCTCTCACTGCCTCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VPKVSLQTPGLRQQDVWQRSIIL*LSLPRT Trigger: GGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCT...TTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACTTTGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 |
||
| CDS-3UTR GCA 90 bp | GGATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATATTAAGGGCTCGAGCTaGGTGTCCATCGAAAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCVATPSLQSGLPEHQLDIKGSS*VSIESV Trigger: GACGCTTTCGATGGACACGCAGCTCGAGCCCTTAAT...ATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGGATTAAGGGCTCGAGCTaGGTGTCCATCGAAAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: MCGNTQSSVRPPGAPAGWIKGSS*VSIESV Trigger: GACGCTTTCGATGGACACGCAGCTCGAGCCCTTAAT...CCATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGGGTCTAATCATCAGCTTCTTGGCGCGGTCTaGTGCATCCAGGGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLGSARSLGSQVGSNHQLLGAV*CIQGSH Trigger: ATGGCTGCCCTGGATGCAGCAGACCGCGCCAAGAAG...CTGATGATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000206450.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATTCAGCATGTCGAGCATaGCCCCAAACCGGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GEESRGTVDTQGRWTAGDSACRA*PQTGFL Trigger: AAGGAACCCGGTTTGGGGCCATGCTCGACATGCTGA...ATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCTTCAGTTCAGCATGTCGAGCATaGCCCCAAACCGGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQTPGLRQQDVWQHPVFSSACRA*PQTGFL Trigger: AAGGAACCCGGTTTGGGGCCATGCTCGACATGCTGA...ACTGAAGACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGGGTCTAATCATCAGGCCAAGAGACACATGGTaGCGCAACGGTCCGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLAVPGPWGHRLGLIIRPRDTW*RNGPSA Trigger: TGCTGACGGACCGTTGCGCCACCATGTGTCTCTTGG...CCTGATGATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | AGCCGTGATGAGGTGGATGACACTAATGACGGACTTGAGCAGCGCGATGGGAGCGATGCAGCCAGTGACTaGCCACGTCCAAGCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SRDEVDDTNDGLEQRDGSDAASD*PRPSSC Trigger: GCATGAGCTTGGACGTGGCCAGTCACTGGCTGCATC...GCTCCCATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCGCAGCCGTGATGAGGTaGATGACACTAATGACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLQTPGLRQQDVWQHPVAAVMR*MTLMTD Trigger: GTCCGTCATTAGTGTCATCCACCTCATCACGGCTGC...GACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000206450.2 |
||
| CDS-3UTR CCA 90 bp | GGATGTGTGGCAACACCCAGTCTTCAGTCAGGCCTCCCGGAGCACCAGCTGGATGCAGCCGTGATGAGGTaGATGACACTAATGACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GCVATPSLQSGLPEHQLDAAVMR*MTLMTD Trigger: GTCCGTCATTAGTGTCATCCACCTCATCACGGCTGC...ATCCAGCTGGTGCTCCGGGAGGCCTGACTGAAGACTGGGTGTTGCCACACATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000206450.2 |
||
| CDS-3UTR TCA 90 bp | CACTGGGACCTCTTAGGAGGAGAGGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTCGATCATCTTGTaGCTCTCACTGCCTCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: HWDLLGGEESRGTVDTQGRSIIL*LSLPRT Trigger: GGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCT...GCCCTGGGTATCTACTGTACCACGTGACTCCTCTCCTCCTAAGAGGTCCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGGGAGGTCCCTCGGAGAAATTaGAGAGATACAGGAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVTWYSRYPGQVDSWGWEVPRRN*RDTGGS Trigger: ACTGCCTCCTGTATCTCTTCAATTTCTCCGAGGGAC...CTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTATTAAGGGCTCGAGCTaGGTGTCCATCGAAAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTPDPRTEAAGCVATPSIKGSS*VSIESV Trigger: GACGCTTTCGATGGACACGCAGCTCGAGCCCTTAAT...ACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGGGAGTCTTGTGACTCTCACTaGCTCGCACCACAGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVTWYSRYPGQVDSWGWESCDSH*LAPQNC Trigger: ACAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGA...CTCCCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGCCGTGATGAGGTGGATGACACTAATGACGGACTTGAGCAGCGCGATGGGTCAGCATGTCGAGCATaGCCCCAAACCGGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSRDEVDDTNDGLEQRDGSACRA*PQTGFL Trigger: AAGGAACCCGGTTTGGGGCCATGCTCGACATGCTGA...CCCATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAAAGTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACAAAGCTCATGCTGAGCTaGAAGAGAAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PQSLTPDPRTEAAGCVATKLMLS*KRRVAR Trigger: ACGAGCCACCCTTCTCTTCCAGCTCAGCATGAGCTT...TGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGCAGCCGTGATGAGGTaGATGACACTAATGACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GEESRGTVDTQGRWTAGDAAVMR*MTLMTD Trigger: GTCCGTCATTAGTGTCATCCACCTCATCACGGCTGC...ATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 |
||
| CDS-3UTR GCA 90 bp | CACTGGGACCTCTTAGGAGGAGAGGAGTCACGTGGTACAGTAGATACCCAGGGCATTAAGGGCTCGAGCTaGGTGTCCATCGAAAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HWDLLGGEESRGTVDTQGIKGSS*VSIESV Trigger: GACGCTTTCGATGGACACGCAGCTCGAGCCCTTAAT...GCCCTGGGTATCTACTGTACCACGTGACTCCTCTCCTCCTAAGAGGTCCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR GCA 90 bp | GCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGGGTCTAATTCTTGTGACTCTCACTaGCTCGCACCACAGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: APFLLGSARSLGSQVGSNSCDSH*LAPQNC Trigger: ACAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGA...ATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGACATGACACTGGGACCTCTTAGGAGGAGAGGAGTCACGTGGTACAGTCTTGGCGCGGTCTGCTaGATCCAGGGCAGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: EKDMTLGPLRRRGVTWYSLGAVC*IQGSHV Trigger: AACATGGCTGCCCTGGATGCAGCAGACCGCGCCAAG...ACTGTACCACGTGACTCCTCTCCTCCTAAGAGGTCCCAGTGTCATGTCTTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 |
||
| CDS-3UTR CCA 90 bp | TCATCTTGTGACTCTCACTGCCTCGCACCACAGAACTTGGGGAGAAAAGCATGGGCTGGAAGAGAAGGGTaGCTCGTGGGTAGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCDSHCLAPQNLGRKAWAGREG*LVGRAG Trigger: CCCTGCTCTACCCACGAGCCACCCTTCTCTTCCAGC...CCATGCTTTTCTCCCCAAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAAAGTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACAAGGATCATTTCTTCTTaGCGCGGTCTGCTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQSLTPDPRTEAAGCVATRIISS*RGLLHP Trigger: TGGATGCAGCAGACCGCGCCAAGAAGAAATGATCCT...TGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACTTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206450.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCCATGTTTCTTGCAGCCGTGATGAGGTGGATGACACTAATGACGGACTTGCGTCCAAGCTCATGCTaGGCTGGAAGAGAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAMFLAAVMRWMTLMTDLRPSSC*AGREGW Trigger: CCACCCTTCTCTTCCAGCTCAGCATGAGCTTGGACG...CAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAACATGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR GCA 90 bp | CTTGCAGCCGTGATGAGGTGGATGACACTAATGACGGACTTGAGCAGCGCGATGATTAAGGGCTCGAGCTaGGTGTCCATCGAAAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAAVMRWMTLMTDLSSAMIKGSS*VSIESV Trigger: GACGCTTTCGATGGACACGCAGCTCGAGCCCTTAAT...CATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | TCATCTTGTGACTCTCACTGCCTCGCACCACAGAACTTGGGGAGAAAAGCATGGCCAAGAGACACATGGTaGCGCAACGGTCCGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSCDSHCLAPQNLGRKAWPRDTW*RNGPSA Trigger: TGCTGACGGACCGTTGCGCCACCATGTGTCTCTTGG...CCATGCTTTTCTCCCCAAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTGTGAACCTGAGGAGCCACAAAGCCTCTCGAGATCACTGGAACGACAGGAAGCTCATGCTGAGCTaGAAGAGAAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: MPVNLRSHKASRDHWNDRKLMLS*KRRVAR Trigger: ACGAGCCACCCTTCTCTTCCAGCTCAGCATGAGCTT...CCTGTCGTTCCAGTGATCTCGAGAGGCTTTGTGGCTCCTCAGGTTCACAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | TCCAATGACATCAGTCTGACTCCTTTGCCCTCACATGTCCCCAAAGTCTCACTCCGTCCAAGCTCATGCTaGGCTGGAAGAGAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNDISLTPLPSHVPKVSLRPSSC*AGREGW Trigger: CCACCCTTCTCTTCCAGCTCAGCATGAGCTTGGACG...GAGTGAGACTTTGGGGACATGTGAGGGCAAAGGAGTCAGACTGATGTCATTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | CGTGATGAGGTGGATGACACTAATGACGGACTTGAGCAGCGCGATGGGAGCTGTGTCCCTCGGAGAAATTaGAGAGATACAGGAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDEVDDTNDGLEQRDGSCVPRRN*RDTGGS Trigger: ACTGCCTCCTGTATCTCTTCAATTTCTCCGAGGGAC...ACAGCTCCCATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206346.2 |
||
| CDS-3UTR TCA 90 bp | CCCCAAAGTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACAAGGTTAGAGAACACATaGGAAAGACATGACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQSLTPDPRTEAAGCVATRLENT*ERHDTG Trigger: CCCAGTGTCATGTCTTTCTCATGTGTTCTCTAACCT...TGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGACTTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206450.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGGGTCTAATCATCAGTCTTGTGACTCTCACTaGCTCGCACCACAGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLGSARSLGSQVGSNHQSCDSH*LAPQNC Trigger: ACAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGA...CTGATGATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTTCTTGCAGCCGTGATGAGGTGGATGACACTAATGACGGACTTGAGCAGCCCAAGAGACACATGGTaGCGCAACGGTCCGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MFLAAVMRWMTLMTDLSSPRDTW*RNGPSA Trigger: TGCTGACGGACCGTTGCGCCACCATGTGTCTCTTGG...GCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGCCATGTTTCTTGCAGCCGTGATGAGGTGGATGACACTAATGACGGAAAGCTCATGCTGAGCTaGAAGAGAAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QGSHVSCSRDEVDDTNDGKLMLS*KRRVAR Trigger: ACGAGCCACCCTTCTCTTCCAGCTCAGCATGAGCTT...TCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAACATGGCTGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206794.2 |
||
| CDS-3UTR TCA 90 bp | TACAATCAAAAGTGGCCAGCTAGGGACATAAAGCAGGTGGGCAGAGACAATGCCAGGTCGATCATCTTGTaGCTCTCACTGCCTCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: YNQKWPARDIKQVGRDNARSIIL*LSLPRT Trigger: GGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCT...GGCATTGTCTCTGCCCACCTGCTTTATGTCCCTAGCTGGCCACTTTTGATTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206170.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGGGTCTAATCATCAGGATCACATGAGAAAGACATaGCACTGGGACCTCTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGSARSLGSQVGSNHQDHMRKT*HWDLLG Trigger: TCCTAAGAGGTCCCAGTGTCATGTCTTTCTCATGTG...ATCCTGATGATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206450.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGCCATGTTTCTTGCAGCCGTGATGAGGTGGATGACACTAATGACGGACTCTTGTGACTCTCACTaGCTCGCACCACAGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: RAAMFLAAVMRWMTLMTDSCDSH*LAPQNC Trigger: ACAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGA...GTCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAACATGGCTGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 |
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| CDS-3UTR GCA 90 bp | CAGGGCAGCCATGTTTCTTGCAGCCGTGATGAGGTGGATGACACTAATGACGGATCTTGTGACTCTCACTaGCTCGCACCACAGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: QGSHVSCSRDEVDDTNDGSCDSH*LAPQNC Trigger: ACAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGA...TCCGTCATTAGTGTCATCCACCTCATCACGGCTGCAAGAAACATGGCTGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206346.2 |
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| CDS-3UTR CCA 90 bp | AAAGACATGACACTGGGACCTCTTAGGAGGAGAGGAGTCACGTGGTACAGTAGATCAGCATGTCGAGCATaGCCCCAAACCGGGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KDMTLGPLRRRGVTWYSRSACRA*PQTGFL Trigger: AAGGAACCCGGTTTGGGGCCATGCTCGACATGCTGA...TCTACTGTACCACGTGACTCCTCTCCTCCTAAGAGGTCCCAGTGTCATGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| CDS-3UTR CCA 90 bp | GACATGACACTGGGACCTCTTAGGAGGAGAGGAGTCACGTGGTACAGTAGATACAAGCTCATGCTGAGCTaGAAGAGAAGGGTGGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: DMTLGPLRRRGVTWYSRYKLMLS*KRRVAR Trigger: ACGAGCCACCCTTCTCTTCCAGCTCAGCATGAGCTT...GTATCTACTGTACCACGTGACTCCTCTCCTCCTAAGAGGTCCCAGTGTCATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| 3UTR CAA 72 bp | TCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTaGGGTCTAATCATCAGGATTAAAGAGATAGTGACA | + |
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Preference number: 4 (lower is better) Translates to: SCLAVPGPWGHR*GLIIRIKEIVT Trigger: TGTCACTATCTCTTTAATCCTGATGATTAGACCCAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032920.5 ENSMUST00000206170.2 ENSMUST00000206450.2 ENSMUST00000206794.2 |
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| CDS-3UTR CCA 90 bp | TCTCATGAAGCTCACATTCTCATGAGGGTAGAAAATATCAAGGTTACAATCAAAGATGCAGCCAGTGACTaGCCACGTCCAAGCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: SHEAHILMRVENIKVTIKDAASD*PRPSSC Trigger: GCATGAGCTTGGACGTGGCCAGTCACTGGCTGCATC...TTTGATTGTAACCTTGATATTTTCTACCCTCATGAGAATGTGAGCTTCATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000206170.2 ENSMUST00000206794.2 |
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| CDS TCA 90 bp | AACTGTGCAGATGCAGCCAGTGACTGGCCACGTCCAAGCTCATGCTaGGCTGGAAGAGAAGGGTGGCTCGTGGGTAGAGCAGGGCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: NCADAASDWPRPSSC*AGREGWLVGRAGPG Trigger: ACCTGGCCCTGCTCTACCCACGAGCCACCCTTCTCTTCCAGCTCAGCATGAGCTTGGACGTGGCCAGTCACTGGCTGCATCTGCACAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206450.2 ENSMUST00000206780.2 ENSMUST00000206794.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTGAGCACCCTTCCTGCTTGGCAGTGCCAGGTCCTTGGGGTCACAGGTTGGAGGATCATTTCTTCTaGGCGCGGTCTGCTGCATCC | + |
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Preference number: 5 (lower is better) Translates to: PPEHPSCLAVPGPWGHRLEDHFF*ARSAAS Trigger: GGATGCAGCAGACCGCGCCAAGAAGAAATGATCCTC...CAACCTGTGACCCCAAGGACCTGGCACTGCCAAGCAGGAAGGGTGCTCAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206450.2 |
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| CDS-3UTR CAA 90 bp | GTCTCACTCCAGACCCCAGGACTGAGGCAGCAGGATGTGTGGCAACACCCAGTCGGTCCCTCGGAGAAATaGAAGAGATACAGGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: VSLQTPGLRQQDVWQHPVGPSEK*KRYRRQ Trigger: CTGCCTCCTGTATCTCTTCAATTTCTCCGAGGGACC...GACTGGGTGTTGCCACACATCCTGCTGCCTCAGTCCTGGGGTCTGGAGTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032920.5 |
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| CDS-3UTR CAA 90 bp | AGAGGAGTCACGTGGTACAGTAGATACCCAGGGCAGGTGGACAGCTGGGGATGGGGTCCCTCGGAGAAATaGAAGAGATACAGGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RGVTWYSRYPGQVDSWGWGPSEK*KRYRRQ Trigger: CTGCCTCCTGTATCTCTTCAATTTCTCCGAGGGACC...CCATCCCCAGCTGTCCACCTGCCCTGGGTATCTACTGTACCACGTGACTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 |
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| CDS-3UTR CAA 90 bp | GATGAGGTGGATGACACTAATGACGGACTTGAGCAGCGCGATGGGAGCTGTGACGGTCCCTCGGAGAAATaGAAGAGATACAGGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: DEVDDTNDGLEQRDGSCDGPSEK*KRYRRQ Trigger: CTGCCTCCTGTATCTCTTCAATTTCTCCGAGGGACC...GTCACAGCTCCCATCGCGCTGCTCAAGTCCGTCATTAGTGTCATCCACCTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206346.2 |
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| CDS TCA 72 bp | GATGCAGCCAGTGACTGGCCACGTCCAAGCTCATGCTaGGCTGGAAGAGAAGGGTGGCTCGTGGGTAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: DAASDWPRPSSC*AGREGWLVGRA Trigger: TGCTCTACCCACGAGCCACCCTTCTCTTCCAGCTCAGCATGAGCTTGGACGTGGCCAGTCACTGGCTGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206450.2 ENSMUST00000206780.2 ENSMUST00000206794.2 |
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| CDS TCA 72 bp | CTGCCTCGCACCACAGAACTGTGCAGATGCAGCCAGTaGCTGGCCACGTCCAAGCTCATGCTGAGCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LPRTTELCRCSQ*LATSKLMLSWK Trigger: CTTCCAGCTCAGCATGAGCTTGGACGTGGCCAGTCACTGGCTGCATCTGCACAGTTCTGTGGTGCGAGGCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206450.2 ENSMUST00000206780.2 |
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| CDS TCA 72 bp | CGAAGCACAGGGTTCCCAGACAGGTCGATCATCTTGTaGCTCTCACTGCCTCGCACCACAGAACTGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RSTGFPDRSIIL*LSLPRTTELCR Trigger: TCTGCACAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCTGTCTGGGAACCCTGTGCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206450.2 ENSMUST00000206780.2 |
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| CDS GCA 72 bp | GGTTCCCAGACAGGTCGATCATCTTGTGACTCTCACTaGCTCGCACCACAGAACTGTGCAGATGCAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GSQTGRSSCDSH*LAPQNCADAAS Trigger: ACTGGCTGCATCTGCACAGTTCTGTGGTGCGAGGCAGTGAGAGTCACAAGATGATCGACCTGTCTGGGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032920.5 ENSMUST00000205830.2 ENSMUST00000206170.2 ENSMUST00000206346.2 ENSMUST00000206450.2 ENSMUST00000206780.2 |
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