Pregenerated sensors for CDIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004071Ensembl transcript IDs: ENSMUST00000004173.12, ENSMUST00000117713.8, ENSMUST00000118703.8, ENSMUST00000147225.8
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATACCCTGGGCACGACTCATGTCCCTAGGATACTCCCACCACTTGTaGCTTCTTCCTGGTCCCCAGCCCAGTGCCACAGCTGTTCCTACT | + |
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Preference number: 1 (lower is better) Translates to: IPWARLMSLGYSHHL*LLPGPQPSATAVPT Trigger: AGTAGGAACAGCTGTGGCACTGGGCTGGGGACCAGGAAGAAGTCACAAGTGGTGGGAGTATCCTAGGGACATGAGTCGTGCCCAGGGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR TCA 90 bp | ACTGCGACCAGGCCACAATTCACAGTGATAGGAGGCCATGCAGTGTaGGAGACCAGGAGAGGGACAGCAGCAGGATACAGCGTCCACACA | + |
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Preference number: 1 (lower is better) Translates to: TATRPQFTVIGGHAV*ETRRGTAAGYSVHT Trigger: TGTGTGGACGCTGTATCCTGCTGCTGTCCCTCTCCTGGTCTCTCACACTGCATGGCCTCCTATCACTGTGAATTGTGGCCTGGTCGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR GCA 90 bp | ACTACAAACTGCGACCAGGCCACAATTCACAGTGATAGGAGGCCATaGAGTGTGAGAGACCAGGAGAGGGACAGCAGCAGGATACAGCGT | + |
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Preference number: 1 (lower is better) Translates to: TTNCDQATIHSDRRP*SVRDQERDSSRIQR Trigger: ACGCTGTATCCTGCTGCTGTCCCTCTCCTGGTCTCTCACACTGCATGGCCTCCTATCACTGTGAATTGTGGCCTGGTCGCAGTTTGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR GCA 90 bp | ATGTCTTATGTTGTGTTGCATGCAGGTACACTAGGAGGCAGCAACTaGCCCTTCCAGACAACCGTGGCTGTGCTGAGGAAGCCTAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: MSYVVLHAGTLGGSN*PFQTTVAVLRKPSL Trigger: CAGGCTAGGCTTCCTCAGCACAGCCACGGTTGTCTGGAAGGGGCAGTTGCTGCCTCCTAGTGTACCTGCATGCAACACAACATAAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR TCA 90 bp | GCCAGTGTGGCCTTGGTAGCTGGACTCTTGGCCTGGTACTACATGTaGAGGACCTGTCATGTTGTTTGCATCCTACCCCAAGTGACCTGT | + |
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Preference number: 1 (lower is better) Translates to: ASVALVAGLLAWYYM*RTCHVVCILPQVTC Trigger: ACAGGTCACTTGGGGTAGGATGCAAACAACATGACAGGTCCTTCACATGTAGTACCAGGCCAAGAGTCCAGCTACCAAGGCCACACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR GCA 90 bp | GCCCAGGGCAGGGGAGTGAAAGGGCCATTTAATGAAACTACAAACTaGGACCAGGCCACAATTCACAGTGATAGGAGGCCATGCAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: AQGRGVKGPFNETTN*DQATIHSDRRPCSV Trigger: CACACTGCATGGCCTCCTATCACTGTGAATTGTGGCCTGGTCGCAGTTTGTAGTTTCATTAAATGGCCCTTTCACTCCCCTGCCCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR CCA 90 bp | AGGACAGGATTTCCAGAGTACAGTGGCAGAACTTCCAACCCTAAGTaGGGAGTTGAGGGGATAGTGACCACTGAGCATGGGGAGCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: RTGFPEYSGRTSNPK*GVEGIVTTEHGEQS Trigger: GCTTTGCTCCCCATGCTCAGTGGTCACTATCCCCTCAACTCCCCACTTAGGGTTGGAAGTTCTGCCACTGTACTCTGGAAATCCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR TCA 90 bp | CTGGCACTTATTCCAGAGACCAATGAACCTACAAGGAGGCACTTCTaGTCTGCCATGTCACAAACCACCAGGCAGAAGTTGCACCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: LALIPETNEPTRRHF*SAMSQTTRQKLHPH Trigger: GTGGGGGTGCAACTTCTGCCTGGTGGTTTGTGACATGGCAGATCAGAAGTGCCTCCTTGTAGGTTCATTGGTCTCTGGAATAAGTGCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR TCA 90 bp | GTGACTTCTTCCTGGTCCCCAGCCCAGTGCCACAGCTGTTCCTACTaGGGAGCTCCAATATGGAAGCAAGTCAACTATGGCAAAAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: VTSSWSPAQCHSCSY*GAPIWKQVNYGKKA Trigger: AGCCTTTTTGCCATAGTTGACTTGCTTCCATATTGGAGCTCCTCAGTAGGAACAGCTGTGGCACTGGGCTGGGGACCAGGAAGAAGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR GCA 90 bp | GAGGATGGGCTCCCGGTACATGATGGGAAGGGAGATATACGTAAATaGCCCTTTTATGCTGCTCAGCCAGACAAAGGTAGGTTGTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: EDGLPVHDGKGDIRK*PFYAAQPDKGRLWV Trigger: GACCCACAACCTACCTTTGTCTGGCTGAGCAGCATAAAAGGGGCATTTACGTATATCTCCCTTCCCATCATGTACCGGGAGCCCATCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR TCA 90 bp | ACAGAATTGTTGCTGGAAGAGTCGGATGCTCAGGGAAGGGCAAGGTaGGGACAGGATTTCCAGAGTACAGTGGCAGAACTTCCAACCCTA | + |
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Preference number: 1 (lower is better) Translates to: TELLLEESDAQGRAR*GQDFQSTVAELPTL Trigger: TAGGGTTGGAAGTTCTGCCACTGTACTCTGGAAATCCTGTCCTCACCTTGCCCTTCCCTGAGCATCCGACTCTTCCAGCAACAATTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR CCA 90 bp | ATGTCCAAGCAACACACAAGATTAGTGCCACCCCATGCCACCCACTaGCCCTTGGCCTTAAATCCAACAGAATTGTTGCTGGAAGAGTCG | + |
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Preference number: 1 (lower is better) Translates to: MSKQHTRLVPPHATH*PLALNPTELLLEES Trigger: CGACTCTTCCAGCAACAATTCTGTTGGATTTAAGGCCAAGGGCCAGTGGGTGGCATGGGGTGGCACTAATCTTGTGTGTTGCTTGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR TCA 90 bp | AGTTTAGGGATGGCCTCTGATGACTTCTGTTCCTCAGATATTCAGTaGACTGGACCAGGCTGGCTCCATGCTAGCAAGAGAAACCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SLGMASDDFCSSDIQ*TGPGWLHASKRNPG Trigger: TCCAGGGTTTCTCTTGCTAGCATGGAGCCAGCCTGGTCCAGTTCACTGAATATCTGAGGAACAGAAGTCATCAGAGGCCATCCCTAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR TCA 90 bp | GCCCCTTTTATGCTGCTCAGCCAGACAAAGGTAGGTTGTGGGTCCTaGACTAACATTTCTGGAGCAGGTATATCAGTGCCTTCCATTGAT | + |
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Preference number: 1 (lower is better) Translates to: APFMLLSQTKVGCGS*TNISGAGISVPSID Trigger: ATCAATGGAAGGCACTGATATACCTGCTCCAGAAATGTTAGTTCAGGACCCACAACCTACCTTTGTCTGGCTGAGCAGCATAAAAGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR CCA 90 bp | CAGCTCTTGAGTGTTTCCATACCTGAGAATTCTGAGGTCCAGGGCTaGCAGTCATTATTTCTTTCTTTCCCTATCTTGGTACCCCAGACA | + |
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Preference number: 1 (lower is better) Translates to: QLLSVSIPENSEVQG*QSLFLSFPILVPQT Trigger: TGTCTGGGGTACCAAGATAGGGAAAGAAAGAAATAATGACTGCCAGCCCTGGACCTCAGAATTCTCAGGTATGGAAACACTCAAGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR CCA 90 bp | CTGAGGAGCTCCAATATGGAAGCAAGTCAACTATGGCAAAAAGGCTaGCACTTATTCCAGAGACCAATGAACCTACAAGGAGGCACTTCT | + |
|
Preference number: 1 (lower is better) Translates to: LRSSNMEASQLWQKG*HLFQRPMNLQGGTS Trigger: AGAAGTGCCTCCTTGTAGGTTCATTGGTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAGTTGACTTGCTTCCATATTGGAGCTCCTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR GCA 90 bp | CCCACCACCTTCACAGTTCAGAAGATTGATTTACCAAGAACTGAGTaGCGAGACTTCAGTGTGTCATCTTCAGACTATCAGGTCTTAGTC | + |
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Preference number: 1 (lower is better) Translates to: PTTFTVQKIDLPRTE*RDFSVSSSDYQVLV Trigger: GACTAAGACCTGATAGTCTGAAGATGACACACTGAAGTCTCGGCACTCAGTTCTTGGTAAATCAATCTTCTGAACTGTGAAGGTGGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR CCA 90 bp | CTAATTATGCAAATGGCAGAAACCAATGCCCTGGCCCAGAACAGCTaGGTTTCCCCAGGGCAGGTCTATATATATAAATTCTGGTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: LIMQMAETNALAQNS*VSPGQVYIYKFWFG Trigger: ACCAAACCAGAATTTATATATATAGACCTGCCCTGGGGAAACCCAGCTGTTCTGGGCCAGGGCATTGGTTTCTGCCATTTGCATAATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR TCA 90 bp | AGCTTATTCTGCATAACCGGGATCTCCCTAATAAGTCTATTAGCCTaGTGTGTCTCAGCTGACTGGTGTGCCTGCCATAACACTCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: SLFCITGISLISLLA*CVSADWCACHNTLK Trigger: TTTTAGAGTGTTATGGCAGGCACACCAGTCAGCTGAGACACATCAGGCTAATAGACTTATTAGGGAGATCCCGGTTATGCAGAATAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR GCA 90 bp | CTCAGAAACAGCATACAAATGGACATCCTCTTTCATGGCACTCCTTaGCAACTTCCTAGCACCTTCTATTTCCATGTATTCATGCTAAAT | + |
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Preference number: 1 (lower is better) Translates to: LRNSIQMDILFHGTP*QLPSTFYFHVFMLN Trigger: ATTTAGCATGAATACATGGAAATAGAAGGTGCTAGGAAGTTGGCAAGGAGTGCCATGAAAGAGGATGTCCATTTGTATGCTGTTTCTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR-3UTR CCA 90 bp | AACCAATGCCCTGGCCCAGAACAGCTGGGTTTCCCCAGGGCAGGTCTATATATACCCCATGCCACCCACTaGCCCTTGGCCTTAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: NQCPGPEQLGFPRAGLYIPHATH*PLALNP Trigger: TGGATTTAAGGCCAAGGGCCAGTGGGTGGCATGGGG...TATATATAGACCTGCCCTGGGGAAACCCAGCTGTTCTGGGCCAGGGCATTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR-3UTR CCA 90 bp | CATGTCACAAACCACCAGGCAGAAGTTGCACCCCCACATAGCACAGACACAGAACCCCATGCCACCCACTaGCCCTTGGCCTTAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: HVTNHQAEVAPPHSTDTEPHATH*PLALNP Trigger: TGGATTTAAGGCCAAGGGCCAGTGGGTGGCATGGGG...TTCTGTGTCTGTGCTATGTGGGGGTGCAACTTCTGCCTGGTGGTTTGTGACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAATGCCCTGGCCCAGAACAGCTGGGTTTCCCCAGGGCAGGTCTATATATACCCAGGGCAGGGGAGTaGAAGGGCCATTTAATGAAA | + |
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Preference number: 2 (lower is better) Translates to: NQCPGPEQLGFPRAGLYIPRAGE*KGHLMK Trigger: TTTCATTAAATGGCCCTTTCACTCCCCTGCCCTGGG...TATATATAGACCTGCCCTGGGGAAACCCAGCTGTTCTGGGCCAGGGCATTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGCCAGCCAGATATACACCAGATAAAGGCTGTCACTCTATTAACAGCCAGATTAGTGCCACCCCATaGCACCCACTGGCCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: SLPARYTPDKGCHSINSQISATP*HPLALG Trigger: GCCAAGGGCCAGTGGGTGGCATGGGGTGGCACTAAT...CTGGCTGTTAATAGAGTGACAGCCTTTATCTGGTGTATATCTGGCTGGCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCAGGTCAGCAACAACTGTGGTTCCAGGTTCTACCCTCAGTGTAGGCCCTCAACAGAATTGTTGCTaGAAGAGTCGGATGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SSRSATTVVPGSTLSVGPQQNCC*KSRMLR Trigger: CCTGAGCATCCGACTCTTCCAGCAACAATTCTGTTG...AGGGCCTACACTGAGGGTAGAACCTGGAACCACAGTTGTTGCTGACCTGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR CAA 90 bp | AAGCAACACACAAGATTAGTGCCACCCCATGCCACCCACTGGCCCTaGGCCTTAAATCCAACAGAATTGTTGCTGGAAGAGTCGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: KQHTRLVPPHATHWP*ALNPTELLLEESDA Trigger: AGCATCCGACTCTTCCAGCAACAATTCTGTTGGATTTAAGGCCAAGGGCCAGTGGGTGGCATGGGGTGGCACTAATCTTGTGTGTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR CAA 90 bp | TGGACTCTTGGCCTGGTACTACATGTGAAGGACCTGTCATGTTGTTaGCATCCTACCCCAAGTGACCTGTTCTATCCCCATCTCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: WTLGLVLHVKDLSCC*HPTPSDLFYPHLHL Trigger: GAGGTGGAGATGGGGATAGAACAGGTCACTTGGGGTAGGATGCAAACAACATGACAGGTCCTTCACATGTAGTACCAGGCCAAGAGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR-3UTR TCA 90 bp | GGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATCTAATTATGCAAATGGCAGAACAGGGAAGGGCAAGGTaGGGACAGGATTTCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GSSSQVLQPGHLIMQMAEQGRAR*GQDFQS Trigger: ACTCTGGAAATCCTGTCCTCACCTTGCCCTTCCCTG...TTCTGCCATTTGCATAATTAGATGTCCAGGCTGCAGAACCTGAGAACTGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR-3UTR TCA 90 bp | GTAATTGGGTTCTTAAATGTGTTGTTTCCCAGGCCCGGGCTCCTGCCTGCCACTATACCAGGCAGCTCTTaGGTGTTTCCATACCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: VIGFLNVLFPRPGLLPATIPGSS*VFPYLR Trigger: TCTCAGGTATGGAAACACTCAAGAGCTGCCTGGTAT...AGTGGCAGGCAGGAGCCCGGGCCTGGGAAACAACACATTTAAGAACCCAATTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGTCATTATTTCTTTCTTTCCCTATCTTGGTACCCCAGACAAGAAGCCCCACCCCATGCCACCCACTaGCCCTTGGCCTTAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: GSHYFFLSLSWYPRQEAPPHATH*PLALNP Trigger: TGGATTTAAGGCCAAGGGCCAGTGGGTGGCATGGGG...TGGGGCTTCTTGTCTGGGGTACCAAGATAGGGAAAGAAAGAAATAATGACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTCACAAACCACCAGGCAGAAGTTGCACCCCCACATAGCACAGACACAGAAATACCAGGCAGCTCTTaGGTGTTTCCATACCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: HVTNHQAEVAPPHSTDTEIPGSS*VFPYLR Trigger: TCTCAGGTATGGAAACACTCAAGAGCTGCCTGGTAT...TTCTGTGTCTGTGCTATGTGGGGGTGCAACTTCTGCCTGGTGGTTTGTGACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR-3UTR GCA 90 bp | GGTATATCAGTGCCTTCCATTGATGCCATGTCTTATGTTGTGTTGCATGCAGGTGCAGCTCATTCTGGCTaGCAGTGTGGCCTTGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: GISVPSIDAMSYVVLHAGAAHSG*QCGLGS Trigger: GCTACCAAGGCCACACTGGCAGCCAGAATGAGCTGC...ACCTGCATGCAACACAACATAAGACATGGCATCAATGGAAGGCACTGATATACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR-3UTR CCA 90 bp | AACCAATGCCCTGGCCCAGAACAGCTGGGTTTCCCCAGGGCAGGTCTATATATACTATGGCAAAAAGGCTaGCACTTATTCCAGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: NQCPGPEQLGFPRAGLYILWQKG*HLFQRP Trigger: TGGTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAG...TATATATAGACCTGCCCTGGGGAAACCCAGCTGTTCTGGGCCAGGGCATTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTAAGGACCAGCCTGGACCTTATACTTATACAGAAAAGGAGAAATGAGGGCCAGGGAAGGGCAAGGTaGGGACAGGATTTCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RVRTSLDLILIQKRRNEGQGRAR*GQDFQS Trigger: ACTCTGGAAATCCTGTCCTCACCTTGCCCTTCCCTG...GCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGTCCAGGCTGGTCCTTACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCAAGTCAACTATGGCAAAAAGGCTGGCACTTATTCCAGAGACCAATGAACAGGGAAGGGCAAGGTaGGGACAGGATTTCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GSKSTMAKRLALIPETNEQGRAR*GQDFQS Trigger: ACTCTGGAAATCCTGTCCTCACCTTGCCCTTCCCTG...TTCATTGGTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAGTTGACTTGCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR-3UTR CCA 90 bp | AGACGGGGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATCTAATTATGCAAATGTTTGGGTTTATACCCTaGGCACGACTCATGTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: RRGSSSQVLQPGHLIMQMFGFIP*ARLMSL Trigger: TAGGGACATGAGTCGTGCCCAGGGTATAAACCCAAA...CATTTGCATAATTAGATGTCCAGGCTGCAGAACCTGAGAACTGGAGCCCCGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCAACAACTGTGGTTCCAGGTTCTACCCTCAGTGTAGGCCCTAGTCTGGGGGCTTATCTTCTGAATTaGAAATGTCCAAGCAACACA | + |
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Preference number: 2 (lower is better) Translates to: SATTVVPGSTLSVGPSLGAYLLN*KCPSNT Trigger: TGTGTTGCTTGGACATTTGCAATTCAGAAGATAAGC...CCCCAGACTAGGGCCTACACTGAGGGTAGAACCTGGAACCACAGTTGTTGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR-3UTR GCA 90 bp | AGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGTGTCAGAGCCATGTTTaGCATGCTTCGACGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RLFVYHLEHSCQRHLVTACQSHV*HASTGS Trigger: AGAGCCCGTCGAAGCATGGCAAACATGGCTCTGACA...CGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
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| 3UTR CAA 90 bp | AGAAATGAGGGCCCTAGTAAGAGCCTCTCTAGCTTATCTTCTGAATaGCAAATGTCCAAGCAACACACAAGATTAGTGCCACCCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: RNEGPSKSLSSLSSE*QMSKQHTRLVPPHA Trigger: GGCATGGGGTGGCACTAATCTTGTGTGTTGCTTGGACATTTGCAATTCAGAAGATAAGCTAGAGAGGCTCTTACTAGGGCCCTCATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR-3UTR CCA 90 bp | TTCATTCCTTCCAGTCCCAGAAAATATAGGGGTTCACAGAGGTGTGGCCAGAAACAACAGAATTGTTGCTaGAAGAGTCGGATGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: FIPSSPRKYRGSQRCGQKQQNCC*KSRMLR Trigger: CCTGAGCATCCGACTCTTCCAGCAACAATTCTGTTG...TTTCTGGCCACACCTCTGTGAACCCCTATATTTTCTGGGACTGGAAGGAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTAGAACAGCAGGGAAACTCAAAGAGACTGAGCCCACCACCTTCACAGTTCAGACCCTGTCTTGCTTaGGTCTACTTAACTTTAGAT | + |
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Preference number: 2 (lower is better) Translates to: MVEQQGNSKRLSPPPSQFRPCLA*VYLTLD Trigger: ATCTAAAGTTAAGTAGACCCAAGCAAGACAGGGTCT...GAACTGTGAAGGTGGTGGGCTCAGTCTCTTTGAGTTTCCCTGCTGTTCTACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR-3UTR CCA 90 bp | AGATTGATTTACCAAGAACTGAGTGCCGAGACTTCAGTGTGTCATCTTCAGACTTTTGGGTTTATACCCTaGGCACGACTCATGTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: RLIYQELSAETSVCHLQTFGFIP*ARLMSL Trigger: TAGGGACATGAGTCGTGCCCAGGGTATAAACCCAAA...AGTCTGAAGATGACACACTGAAGTCTCGGCACTCAGTTCTTGGTAAATCAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGCCAGCCAGATATACACCAGATAAAGGCTGTCACTCTATTAACAGCCAGAGACTGTTCAAGAAATaGCCAGGTTTGGGTTTATAC | + |
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Preference number: 2 (lower is better) Translates to: SLPARYTPDKGCHSINSQRLFKK*PGLGLY Trigger: GTATAAACCCAAACCTGGTCATTTCTTGAACAGTCT...CTGGCTGTTAATAGAGTGACAGCCTTTATCTGGTGTATATCTGGCTGGCAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGTCATGCCAGCTGATGATGGCTCAGTTTTCTAGGCCTTTTGATAGTCTAAATGAAACTACAAACTaGGACCAGGCCACAATTCAC | + |
|
Preference number: 2 (lower is better) Translates to: KGSCQLMMAQFSRPFDSLNETTN*DQATIH Trigger: GTGAATTGTGGCCTGGTCGCAGTTTGTAGTTTCATT...TAGACTATCAAAAGGCCTAGAAAACTGAGCCATCATCAGCTGGCATGACCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR CAA 90 bp | TATATATATAAATTCTGGTTTGGTGTAATTGGGTTCTTAAATGTGTaGTTTCCCAGGCCCGGGCTCCTGCCTGCCACTAGACTACCTATA | + |
|
Preference number: 2 (lower is better) Translates to: YIYKFWFGVIGFLNV*FPRPGLLPATRLPI Trigger: TATAGGTAGTCTAGTGGCAGGCAGGAGCCCGGGCCTGGGAAACAACACATTTAAGAACCCAATTACACCAAACCAGAATTTATATATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTGGGTTTATACCCTGGAGACCCTGTCTTGCTTaGGTCTACTTAACTTTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: QAYSQTVQEMTRFGFIPWRPCLA*VYLTLD Trigger: ATCTAAAGTTAAGTAGACCCAAGCAAGACAGGGTCT...CCAGGGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCCTGGACCTTATACTTATACAGAAAAGGAGAAATGAGGGCCCTAGTAAGAGCGCTTATCTTCTGAATTaGAAATGTCCAAGCAACACA | + |
|
Preference number: 2 (lower is better) Translates to: SLDLILIQKRRNEGPSKSAYLLN*KCPSNT Trigger: TGTGTTGCTTGGACATTTGCAATTCAGAAGATAAGC...GCTCTTACTAGGGCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGTCCAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTAAGGACCAGCCTGGACCTTATACTTATACAGAAAAGGAGAAATGAGGGCGCTTATCTTCTGAATTaGAAATGTCCAAGCAACACA | + |
|
Preference number: 2 (lower is better) Translates to: RVRTSLDLILIQKRRNEGAYLLN*KCPSNT Trigger: TGTGTTGCTTGGACATTTGCAATTCAGAAGATAAGC...GCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGTCCAGGCTGGTCCTTACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTATATCAGTGCCTTCCATTGATGCCATGTCTTATGTTGTGTTGCATGCAGGTCTGGTTTGGTGTAATTaGGTTCTTAAATGTGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: GISVPSIDAMSYVVLHAGLVWCN*VLKCVV Trigger: AACAACACATTTAAGAACCCAATTACACCAAACCAG...ACCTGCATGCAACACAACATAAGACATGGCATCAATGGAAGGCACTGATATACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR TCA 72 bp | GCAGCAACTGCCCCTTCCAGACAACCGTGGCTGTGCTaGGGAAGCCTAGCCTGCAGCTCATTCTGGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AATAPSRQPWLC*GSLACSSFWLP Trigger: TGGCAGCCAGAATGAGCTGCAGGCTAGGCTTCCTCAGCACAGCCACGGTTGTCTGGAAGGGGCAGTTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR GCA 72 bp | GTTGTGTTGCATGCAGGTACACTAGGAGGCAGCAACTaGCCCTTCCAGACAACCGTGGCTGTGCTGAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VVLHAGTLGGSN*PFQTTVAVLRK Trigger: CTTCCTCAGCACAGCCACGGTTGTCTGGAAGGGGCAGTTGCTGCCTCCTAGTGTACCTGCATGCAACACAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGCAGGTCAGCAACAACTGTGGTTCCAGGTTCTACCCTCAGTGTAGGCCCTTGCCTCTGGGTGCTTTaGGTCCCAGGAAGAGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSRSATTVVPGSTLSVGPCLWVL*VPGRVR Trigger: CCTTACTCTTCCTGGGACCAAAAGCACCCAGAGGCA...AGGGCCTACACTGAGGGTAGAACCTGGAACCACAGTTGTTGCTGACCTGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR TCA 72 bp | TCCTGGTCCCCAGCCCAGTGCCACAGCTGTTCCTACTaGGGAGCTCCAATATGGAAGCAAGTCAACTATGGC | + |
|
Preference number: 3 (lower is better) Translates to: SWSPAQCHSCSY*GAPIWKQVNYG Trigger: GCCATAGTTGACTTGCTTCCATATTGGAGCTCCTCAGTAGGAACAGCTGTGGCACTGGGCTGGGGACCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CCA 72 bp | ATGCTGGGAGTGAGATGCCCATACACACAGGGTTTGTaGGAAAGGGTCATGCCAGCTGATGATGGCTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: MLGVRCPYTQGL*ERVMPADDGSV Trigger: AACTGAGCCATCATCAGCTGGCATGACCCTTTCCCACAAACCCTGTGTGTATGGGCATCTCACTCCCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR-3UTR CAA 90 bp | TACTCTGACTTCATTCCAGCAGGTCAGCAACAACTGTGGTTCCAGGTTCTACCCGCCACCCACTGGCCCTaGGCCTTAAATCCAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: YSDFIPAGQQQLWFQVLPATHWP*ALNPTE Trigger: TTCTGTTGGATTTAAGGCCAAGGGCCAGTGGGTGGC...GGGTAGAACCTGGAACCACAGTTGTTGCTGACCTGCTGGAATGAAGTCAGAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACGGGGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATCTAATTATGCAAATGAGCCCAGGATCCTCTTaGCTTCATACCAGGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RRGSSSQVLQPGHLIMQMSPGSS*LHTRQL Trigger: GAGCTGCCTGGTATGAAGCAAAGAGGATCCTGGGCT...CATTTGCATAATTAGATGTCCAGGCTGCAGAACCTGAGAACTGGAGCCCCGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAACACACAAGATTAGTGCCACCCCATGCCACCCACTGGCCCTTGGCCTTAAATCCAACAGAATTGTaGCTGGAAGAGTCGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: KQHTRLVPPHATHWPLALNPTEL*LEESDA Trigger: AGCATCCGACTCTTCCAGCAACAATTCTGTTGGATT...TAAGGCCAAGGGCCAGTGGGTGGCATGGGGTGGCACTAATCTTGTGTGTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCAAAAAGGCTGGCACTTATTCCAGAGACCAATGAACCTACAAGGAGGCACGCCACCCACTGGCCCTaGGCCTTAAATCCAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: MAKRLALIPETNEPTRRHATHWP*ALNPTE Trigger: TTCTGTTGGATTTAAGGCCAAGGGCCAGTGGGTGGC...GTGCCTCCTTGTAGGTTCATTGGTCTCTGGAATAAGTGCCAGCCTTTTTGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATCTAATTATGCAAATGGCAGAAAGCCCAGGATCCTCTTaGCTTCATACCAGGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GSSSQVLQPGHLIMQMAESPGSS*LHTRQL Trigger: GAGCTGCCTGGTATGAAGCAAAGAGGATCCTGGGCT...TTCTGCCATTTGCATAATTAGATGTCCAGGCTGCAGAACCTGAGAACTGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACTACATGTGAAGGACCTGTCATGTTGTTTGCATCCTACCCCAAGTGACCTGGGGTTCTTAAATGTGTaGTTTCCCAGGCCCGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VLHVKDLSCCLHPTPSDLGFLNV*FPRPGL Trigger: GAGCCCGGGCCTGGGAAACAACACATTTAAGAACCC...CAGGTCACTTGGGGTAGGATGCAAACAACATGACAGGTCCTTCACATGTAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR TCA 72 bp | GCCTTGGTAGCTGGACTCTTGGCCTGGTACTACATGTaGAGGACCTGTCATGTTGTTTGCATCCTACCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ALVAGLLAWYYM*RTCHVVCILPQ Trigger: TTGGGGTAGGATGCAAACAACATGACAGGTCCTTCACATGTAGTACCAGGCCAAGAGTCCAGCTACCAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR GCA 72 bp | AATGTCCAAGCAACACACAAGATTAGTGCCACCCCATaGCACCCACTGGCCCTTGGCCTTAAATCCAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: NVQATHKISATP*HPLALGLKSNR Trigger: TCTGTTGGATTTAAGGCCAAGGGCCAGTGGGTGGCATGGGGTGGCACTAATCTTGTGTGTTGCTTGGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CCA 72 bp | CAACACACAAGATTAGTGCCACCCCATGCCACCCACTaGCCCTTGGCCTTAAATCCAACAGAATTGTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QHTRLVPPHATH*PLALNPTELLL Trigger: CAGCAACAATTCTGTTGGATTTAAGGCCAAGGGCCAGTGGGTGGCATGGGGTGGCACTAATCTTGTGTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR GCA 72 bp | GATGCCCATACACACAGGGTTTGTGGGAAAGGGTCATaGCAGCTGATGATGGCTCAGTTTTCTAGGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: DAHTHRVCGKGS*QLMMAQFSRPF Trigger: AAAAGGCCTAGAAAACTGAGCCATCATCAGCTGGCATGACCCTTTCCCACAAACCCTGTGTGTATGGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR GCA 72 bp | CTCCCGGTACATGATGGGAAGGGAGATATACGTAAATaGCCCTTTTATGCTGCTCAGCCAGACAAAGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPVHDGKGDIRK*PFYAAQPDKGR Trigger: CCTACCTTTGTCTGGCTGAGCAGCATAAAAGGGGCATTTACGTATATCTCCCTTCCCATCATGTACCGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR CCA 72 bp | GCTAAGACGGGGCTCCAGTTCTCAGGTTCTGCAGCCTaGACATCTAATTATGCAAATGGCAGAAACCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: AKTGLQFSGSAA*TSNYANGRNQC Trigger: GCATTGGTTTCTGCCATTTGCATAATTAGATGTCCAGGCTGCAGAACCTGAGAACTGGAGCCCCGTCTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| 3UTR CCA 72 bp | ATGTTCAGCTGGTTTGCAGTCCTCATCAGGTGTATCTaGGCTCTAGCTTCTCCATGGGTCATCTGTAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: MFSWFAVLIRCI*ALASPWVICRV Trigger: CACTCTACAGATGACCCATGGAGAAGCTAGAGCCCAGATACACCTGATGAGGACTGCAAACCAGCTGAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR-3UTR CAA 90 bp | GACCAGGCCACAATTCACAGTGATAGGAGGCCATGCAGTGTGAGAGACCAGGAGAGCTTATCTTCTGAATaGCAAATGTCCAAGCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: DQATIHSDRRPCSVRDQESLSSE*QMSKQH Trigger: GTGTTGCTTGGACATTTGCAATTCAGAAGATAAGCT...CTCCTGGTCTCTCACACTGCATGGCCTCCTATCACTGTGAATTGTGGCCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR TCA 72 bp | ATTCCAGAGACCAATGAACCTACAAGGAGGCACTTCTaGTCTGCCATGTCACAAACCACCAGGCAGAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: IPETNEPTRRHF*SAMSQTTRQKL Trigger: CAACTTCTGCCTGGTGGTTTGTGACATGGCAGATCAGAAGTGCCTCCTTGTAGGTTCATTGGTCTCTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR TCA 72 bp | CGTCCACACAGGCATATTCACAGACTGTTCAAGAAATaGCCAGGTTTGGGTTTATACCCTGGGCACGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: RPHRHIHRLFKK*PGLGLYPGHDS Trigger: TGAGTCGTGCCCAGGGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTGTGTGGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR TCA 72 bp | TGCATAACCGGGATCTCCCTAATAAGTCTATTAGCCTaGTGTGTCTCAGCTGACTGGTGTGCCTGCCATAAC | + |
|
Preference number: 3 (lower is better) Translates to: CITGISLISLLA*CVSADWCACHN Trigger: GTTATGGCAGGCACACCAGTCAGCTGAGACACATCAGGCTAATAGACTTATTAGGGAGATCCCGGTTATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR TCA 72 bp | ATGCTGCTCAGCCAGACAAAGGTAGGTTGTGGGTCCTaGACTAACATTTCTGGAGCAGGTATATCAGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: MLLSQTKVGCGS*TNISGAGISVP Trigger: AGGCACTGATATACCTGCTCCAGAAATGTTAGTTCAGGACCCACAACCTACCTTTGTCTGGCTGAGCAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR GCA 72 bp | AGGGGAGTGAAAGGGCCATTTAATGAAACTACAAACTaGGACCAGGCCACAATTCACAGTGATAGGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RGVKGPFNETTN*DQATIHSDRRP Trigger: TGGCCTCCTATCACTGTGAATTGTGGCCTGGTCGCAGTTTGTAGTTTCATTAAATGGCCCTTTCACTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CCA 72 bp | GGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTaGGTTTATACCCTGGGCACGACTCATGTCCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GIFTDCSRNDQV*VYTLGTTHVPR Trigger: CCTAGGGACATGAGTCGTGCCCAGGGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CCA 72 bp | CAAATGGCAGAAACCAATGCCCTGGCCCAGAACAGCTaGGTTTCCCCAGGGCAGGTCTATATATATAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: QMAETNALAQNS*VSPGQVYIYKF Trigger: GAATTTATATATATAGACCTGCCCTGGGGAAACCCAGCTGTTCTGGGCCAGGGCATTGGTTTCTGCCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACAGGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTGGGTTTATACCGCCACCCACTGGCCCTaGGCCTTAAATCCAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HTGIFTDCSRNDQVWVYTATHWP*ALNPTE Trigger: TTCTGTTGGATTTAAGGCCAAGGGCCAGTGGGTGGC...GGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTACTAAGCTAAGACGGGGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATTTAAATCCAACAGAATaGTTGCTGGAAGAGTCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EVTKLRRGSSSQVLQPGHLNPTE*LLEESD Trigger: ATCCGACTCTTCCAGCAACAATTCTGTTGGATTTAA...ATGTCCAGGCTGCAGAACCTGAGAACTGGAGCCCCGTCTTAGCTTAGTAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTACTAAGCTAAGACGGGGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATAGCTTATCTTCTGAATaGCAAATGTCCAAGCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: EVTKLRRGSSSQVLQPGHSLSSE*QMSKQH Trigger: GTGTTGCTTGGACATTTGCAATTCAGAAGATAAGCT...ATGTCCAGGCTGCAGAACCTGAGAACTGGAGCCCCGTCTTAGCTTAGTAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| 3UTR TCA 72 bp | TATGGCAAAAAGGCTGGCACTTATTCCAGAGACCAATaGACCTACAAGGAGGCACTTCTGATCTGCCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: YGKKAGTYSRDQ*TYKEALLICHV Trigger: GACATGGCAGATCAGAAGTGCCTCCTTGTAGGTTCATTGGTCTCTGGAATAAGTGCCAGCCTTTTTGCCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CCA 72 bp | TTACAGAAACCATTTCTGTCCCTAGTACCTCAGTGTTaGGAGAGGATAGCTGTGGGCACTCAAGTCCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LQKPFLSLVPQC*ERIAVGTQVLS Trigger: ACTAAGGACTTGAGTGCCCACAGCTATCCTCTCCCAACACTGAGGTACTAGGGACAGAAATGGTTTCTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR CCA 72 bp | CTACTGAGGAGCTCCAATATGGAAGCAAGTCAACTATaGCAAAAAGGCTGGCACTTATTCCAGAGACCAATG | + |
|
Preference number: 3 (lower is better) Translates to: LLRSSNMEASQL*QKGWHLFQRPM Trigger: CATTGGTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAGTTGACTTGCTTCCATATTGGAGCTCCTCAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CCA 72 bp | ACTCTAAAAACAAACGCCACACACTTCCCTCCTTCCTaGGATAGGATAGAGTCCCTCAGAAACAGCATACAA | + |
|
Preference number: 3 (lower is better) Translates to: TLKTNATHFPPS*DRIESLRNSIQ Trigger: TTGTATGCTGTTTCTGAGGGACTCTATCCTATCCCAGGAAGGAGGGAAGTGTGTGGCGTTTGTTTTTAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR-3UTR CAA 90 bp | CCAATATGGAAGCAAGTCAACTATGGCAAAAAGGCTGGCACTTATTCCAGAGACAATCCAACAGAATTGTaGCTGGAAGAGTCGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: PIWKQVNYGKKAGTYSRDNPTEL*LEESDA Trigger: AGCATCCGACTCTTCCAGCAACAATTCTGTTGGATT...GTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAGTTGACTTGCTTCCATATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR GCA 72 bp | GGTCCTGAACTAACATTTCTGGAGCAGGTATATCAGTaGCTTCCATTGATGCCATGTCTTATGTTGTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GPELTFLEQVYQ*LPLMPCLMLCC Trigger: GCAACACAACATAAGACATGGCATCAATGGAAGGCACTGATATACCTGCTCCAGAAATGTTAGTTCAGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR TCA 72 bp | ACTAAGACATGCAGGATAGTGTTCACTTTTCTGGTTTaGTGTTCAGCTGGTTTGCAGTCCTCATCAGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TKTCRIVFTFLV*CSAGLQSSSGV Trigger: TACACCTGATGAGGACTGCAAACCAGCTGAACATCAAACCAGAAAAGTGAACACTATCCTGCATGTCTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR GCA 72 bp | AGCATACAAATGGACATCCTCTTTCATGGCACTCCTTaGCAACTTCCTAGCACCTTCTATTTCCATGTATTC | + |
|
Preference number: 3 (lower is better) Translates to: SIQMDILFHGTP*QLPSTFYFHVF Trigger: GAATACATGGAAATAGAAGGTGCTAGGAAGTTGGCAAGGAGTGCCATGAAAGAGGATGTCCATTTGTATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR CCA 72 bp | TCCAATATGGAAGCAAGTCAACTATGGCAAAAAGGCTaGCACTTATTCCAGAGACCAATGAACCTACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SNMEASQLWQKG*HLFQRPMNLQG Trigger: TCCTTGTAGGTTCATTGGTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAGTTGACTTGCTTCCATATTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCATTTAATGAAACTACAAACTGCGACCAGGCCACAATTCACAGTGATAGGATTAAATCCAACAGAATaGTTGCTGGAAGAGTCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GHLMKLQTATRPQFTVIGLNPTE*LLEESD Trigger: ATCCGACTCTTCCAGCAACAATTCTGTTGGATTTAA...TCCTATCACTGTGAATTGTGGCCTGGTCGCAGTTTGTAGTTTCATTAAATGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAATATGGAAGCAAGTCAACTATGGCAAAAAGGCTGGCACTTATTCCAGAGACTTAAATCCAACAGAATaGTTGCTGGAAGAGTCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PIWKQVNYGKKAGTYSRDLNPTE*LLEESD Trigger: ATCCGACTCTTCCAGCAACAATTCTGTTGGATTTAA...GTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAGTTGACTTGCTTCCATATTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR GCA 72 bp | TTTTCTAGGCCTTTTGATAGTCTAAAGAGCTTATTCTaGATAACCGGGATCTCCCTAATAAGTCTATTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FSRPFDSLKSLF*ITGISLISLLA Trigger: GGCTAATAGACTTATTAGGGAGATCCCGGTTATGCAGAATAAGCTCTTTAGACTATCAAAAGGCCTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| 3UTR CCA 72 bp | TGGGTTTCCCCAGGGCAGGTCTATATATATAAATTCTaGTTTGGTGTAATTGGGTTCTTAAATGTGTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: WVSPGQVYIYKF*FGVIGFLNVLF Trigger: AAACAACACATTTAAGAACCCAATTACACCAAACCAGAATTTATATATATAGACCTGCCCTGGGGAAACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAACAACTGTGGTTCCAGGTTCTACCCTCAGTGTAGGCCCTAGTCTGGGGCACTGGTTGGCCAGGTaGCTCATAGGGTGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SATTVVPGSTLSVGPSLGHWLAR*LIGWRG Trigger: GCCCCTCCACCCTATGAGCCACCTGGCCAACCAGTG...CCCCAGACTAGGGCCTACACTGAGGGTAGAACCTGGAACCACAGTTGTTGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAGGTCCTGTCAGAGCCATGTTTGCCATGCTTCGACGGGCTCTAGTTTCCACTGGTTGGCCAGGTaGCTCATAGGGTGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGRSCQSHVCHASTGSSFHWLAR*LIGWRG Trigger: GCCCCTCCACCCTATGAGCCACCTGGCCAACCAGTG...GAAACTAGAGCCCGTCGAAGCATGGCAAACATGGCTCTGACAGGACCTGCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS-3UTR CCA 90 bp | GCAACACACAAGATTAGTGCCACCCCATGCCACCCACTGGCCCTTGGCCTTAAAGGCTGTAGGACCTCCTaGATAAGGAGGGGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATHKISATPCHPLALGLKGCRTS*IRRGWL Trigger: GAGCCACCCCCTCCTTATCCAGGAGGTCCTACAGCC...TTTAAGGCCAAGGGCCAGTGGGTGGCATGGGGTGGCACTAATCTTGTGTGTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAACACACAAGATTAGTGCCACCCCATGCCACCCACTGGCCCTTGGCCTTAAGGCAGTGGCATGCCTaGTGGAGGCTGCATCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQHTRLVPPHATHWPLALRQWHA*WRLHHS Trigger: GCTGTGATGCAGCCTCCACCAGGCATGCCACTGCCT...TAAGGCCAAGGGCCAGTGGGTGGCATGGGGTGGCACTAATCTTGTGTGTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGGCCACAATTCACAGTGATAGGAGGCCATGCAGTGTGAGAGACCAGGAGGCCAGGCTGAGGCACTaGTTGGCCAGGTGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: DQATIHSDRRPCSVRDQEARLRH*LARWLI Trigger: TATGAGCCACCTGGCCAACCAGTGCCTCAGCCTGGC...CTCCTGGTCTCTCACACTGCATGGCCTCCTATCACTGTGAATTGTGGCCTGGTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCCTGGCCCAGAACAGCTGGGTTTCCCCAGGGCAGGTCTATATATATAAATGCCAGGGTAGGGCCCTaGTGGGTAGGGTCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MPWPRTAGFPQGRSIYINARVGP*WVGSWW Trigger: CCACCAGGACCCTACCCACCAGGGCCCTACCCTGGC...ATTTATATATATAGACCTGCCCTGGGGAAACCCAGCTGTTCTGGGCCAGGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAACAACTGTGGTTCCAGGTTCTACCCTCAGTGTAGGCCCTAGTCTGGGGGTACTGTCACCGTGGTaGCTGCCCCTGATGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SATTVVPGSTLSVGPSLGVLSPW*LPLMGP Trigger: TGGTCCCATCAGGGGCAGCCACCACGGTGACAGTAC...CCCCAGACTAGGGCCTACACTGAGGGTAGAACCTGGAACCACAGTTGTTGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGTCCTGTCAGAGCCATGTTTGCCATGCTTCGACGGGCTCTAGTTTCTGTACTGTCACCGTGGTaGCTGCCCCTGATGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RAGPVRAMFAMLRRALVSVLSPW*LPLMGP Trigger: TGGTCCCATCAGGGGCAGCCACCACGGTGACAGTAC...AGAAACTAGAGCCCGTCGAAGCATGGCAAACATGGCTCTGACAGGACCTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAACAACTGTGGTTCCAGGTTCTACCCTCAGTGTAGGCCCTAGTCTGGGGGCAGTACTGTCACCGTaGTGGCTGCCCCTGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SATTVVPGSTLSVGPSLGAVLSP*WLPLMG Trigger: TCCCATCAGGGGCAGCCACCACGGTGACAGTACTGC...CCCCAGACTAGGGCCTACACTGAGGGTAGAACCTGGAACCACAGTTGTTGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAACAGAATTGTTGCTGGAAGAGTCGGATGCTCAGGGAAGGGCAAGGTGAGCACTGGTTGGCCAGGTaGCTCATAGGGTGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQQNCCWKSRMLREGQGEHWLAR*LIGWRG Trigger: GCCCCTCCACCCTATGAGCCACCTGGCCAACCAGTG...CTCACCTTGCCCTTCCCTGAGCATCCGACTCTTCCAGCAACAATTCTGTTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTTACTAAGCTAAGACGGGGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATCACTGGTTGGCCAGGTaGCTCATAGGGTGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVTKLRRGSSSQVLQPGHHWLAR*LIGWRG Trigger: GCCCCTCCACCCTATGAGCCACCTGGCCAACCAGTG...ATGTCCAGGCTGCAGAACCTGAGAACTGGAGCCCCGTCTTAGCTTAGTAACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | AGAATAAGGGAGAAGGGCAGGTCCTGTCAGAGCCATGTTTGCCATGCTTCGACGGCCAGGCTGAGGCACTaGTTGGCCAGGTGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RIREKGRSCQSHVCHASTARLRH*LARWLI Trigger: TATGAGCCACCTGGCCAACCAGTGCCTCAGCCTGGC...CGTCGAAGCATGGCAAACATGGCTCTGACAGGACCTGCCCTTCTCCCTTATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCATGCCACCCACTGGCCCTTGGCCTTAAATCCAACAGAATTGTTGCTGGAGCAGTACTGTCACCGTaGTGGCTGCCCCTGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPCHPLALGLKSNRIVAGAVLSP*WLPLMG Trigger: TCCCATCAGGGGCAGCCACCACGGTGACAGTACTGC...TCCAGCAACAATTCTGTTGGATTTAAGGCCAAGGGCCAGTGGGTGGCATGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | CATGTCACAAACCACCAGGCAGAAGTTGCACCCCCACATAGCACAGACACAGAAGGCTGTAGGACCTCCTaGATAAGGAGGGGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVTNHQAEVAPPHSTDTEGCRTS*IRRGWL Trigger: GAGCCACCCCCTCCTTATCCAGGAGGTCCTACAGCC...TTCTGTGTCTGTGCTATGTGGGGGTGCAACTTCTGCCTGGTGGTTTGTGACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATAGCCCAGGATCCTCTTTGCTTCATACCAGGCAGCTCTTGAGTGTTTCCGCCAGGGTAGGGCCCTaGTGGGTAGGGTCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNSPGSSLLHTRQLLSVSARVGP*WVGSWW Trigger: CCACCAGGACCCTACCCACCAGGGCCCTACCCTGGC...GGAAACACTCAAGAGCTGCCTGGTATGAAGCAAAGAGGATCCTGGGCTATTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGATGGGACCAATACTGTaGCCGTGTGGCCCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPLRTQLSAPSCNGECGMGPIL*PCGPQG Trigger: GCCCTGGGGGCCACACGGCCACAGTATTGGTCCCAT...CCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| 3UTR CAA 72 bp | GCCACCCACTGGCCCTTGGCCTTAAATCCAACAGAATaGTTGCTGGAAGAGTCGGATGCTCAGGGAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ATHWPLALNPTE*LLEESDAQGRA Trigger: TGCCCTTCCCTGAGCATCCGACTCTTCCAGCAACAATTCTGTTGGATTTAAGGCCAAGGGCCAGTGGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCCAGCAGGTCAGCAACAACTGTGGTTCCAGGTTCTACCCTCAGTGTAGGATGGCCTGCTGGCAGTaGGGACACACTGTCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SFQQVSNNCGSRFYPQCRMACWQ*GHTVCT Trigger: AGTGCAGACAGTGTGTCCTCACTGCCAGCAGGCCAT...CCTACACTGAGGGTAGAACCTGGAACCACAGTTGTTGCTGACCTGCTGGAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGGGAGAAGGGCAGGTCCTGTCAGAGCCATGTTTGCCATGCTTCGACGGGCTCAAAGATCTCTCCCTaGAGTACTGTCACCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IREKGRSCQSHVCHASTGSKISP*STVTVV Trigger: CACCACGGTGACAGTACTGCAGGGAGAGATCTTTGA...GCCCGTCGAAGCATGGCAAACATGGCTCTGACAGGACCTGCCCTTCTCCCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS-3UTR CCA 90 bp | AGACGGGGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATCTAATTATGCAAATGAGGCAGTGGCATGCCTaGTGGAGGCTGCATCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRGSSSQVLQPGHLIMQMRQWHA*WRLHHS Trigger: GCTGTGATGCAGCCTCCACCAGGCATGCCACTGCCT...CATTTGCATAATTAGATGTCCAGGCTGCAGAACCTGAGAACTGGAGCCCCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGGTACATTGCTTTCTTAGCAGTGCTTGGAATGGTCATTGCCATGCTGAGGGTAGGGCCCTGGTaGGTAGGGTCCTGGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RPGYIAFLAVLGMVIAMLRVGPW*VGSWWI Trigger: TATCCACCAGGACCCTACCCACCAGGGCCCTACCCT...CAGCATGGCAATGACCATTCCAAGCACTGCTAAGAAAGCAATGTACCCAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| CDS-3UTR CCA 90 bp | TGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGAGGGTAGGGCCCTGGTaGGTAGGGTCCTGGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: CLPLRTQLSAPSCNGECGRVGPW*VGSWWI Trigger: TATCCACCAGGACCCTACCCACCAGGGCCCTACCCT...CCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS-3UTR CCA 90 bp | GCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGCCAGGGTAGGGCCCTaGTGGGTAGGGTCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQIICLPLRTQLSAPSCNARVGP*WVGSWW Trigger: CCACCAGGACCCTACCCACCAGGGCCCTACCCTGGC...GTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS-3UTR CCA 90 bp | TACAAGGAGGCACTTCTGATCTGCCATGTCACAAACCACCAGGCAGAAGTTGCAGTACTGTCACCGTGGTaGCTGCCCCTGATGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: YKEALLICHVTNHQAEVAVLSPW*LPLMGP Trigger: TGGTCCCATCAGGGGCAGCCACCACGGTGACAGTAC...TGCAACTTCTGCCTGGTGGTTTGTGACATGGCAGATCAGAAGTGCCTCCTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CAA 72 bp | ACCCACTGGCCCTTGGCCTTAAATCCAACAGAATTGTaGCTGGAAGAGTCGGATGCTCAGGGAAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: THWPLALNPTEL*LEESDAQGRAR Trigger: CCTTGCCCTTCCCTGAGCATCCGACTCTTCCAGCAACAATTCTGTTGGATTTAAGGCCAAGGGCCAGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | GACCAGGCCACAATTCACAGTGATAGGAGGCCATGCAGTGTGAGAGACCAGGAGCTGCAGGCATGTAGGTaGCATCTGCATTCATATGGG | + |
|
Preference number: 4 (lower is better) Translates to: DQATIHSDRRPCSVRDQELQACR*HLHSYG Trigger: CCCATATGAATGCAGATGGCACCTACATGCCTGCAG...CTCCTGGTCTCTCACACTGCATGGCCTCCTATCACTGTGAATTGTGGCCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAACACACAAGATTAGTGCCACCCCATGCCACCCACTGGCCCTTGGCCTTACAGCTGGGACATGTGTaGGTCACATCCTTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQHTRLVPPHATHWPLALQLGHV*VTSLKS Trigger: TGACTTCAAGGATGTGACGCACACATGTCCCAGCTG...TAAGGCCAAGGGCCAGTGGGTGGCATGGGGTGGCACTAATCTTGTGTGTTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCCTACTGAGGAGCTCCAATATGGAAGCAAGTCAACTATGGCAAAAAGGCAGGGTAGGGCCCTGGTaGGTAGGGTCCTGCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFLLRSSNMEASQLWQKGRVGPW*VGSCRH Trigger: ATGCCTGCAGGACCCTACCCACCAGGGCCCTACCCT...GCCTTTTTGCCATAGTTGACTTGCTTCCATATTGGAGCTCCTCAGTAGGAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117713.8 |
||
| CDS-3UTR GCA 90 bp | GAGAATAAGGGAGAAGGGCAGGTCCTGTCAGAGCCATGTTTGCCATGCTTCGACCTGCAGGCATGTAGGTaGCATCTGCATTCATATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENKGEGQVLSEPCLPCFDLQACR*HLHSYG Trigger: CCCATATGAATGCAGATGGCACCTACATGCCTGCAG...GTCGAAGCATGGCAAACATGGCTCTGACAGGACCTGCCCTTCTCCCTTATTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAACAGAATTGTTGCTGGAAGAGTCGGATGCTCAGGGAAGGGCAAGGTGAGTGCAGATGTAGGCTTTaGAGCTGGGACATGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: IQQNCCWKSRMLREGQGECRCRL*SWDMCA Trigger: CGCACACATGTCCCAGCTGCAAAGCCTACATCTGCA...CTCACCTTGCCCTTCCCTGAGCATCCGACTCTTCCAGCAACAATTCTGTTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTCATTATTTCTTTCTTTCCCTATCTTGGTACCCCAGACAAGAAGCCCCACAGTGGCATGCCTGGTaGAGGCTGCATCACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHYFFLSLSWYPRQEAPQWHAW*RLHHSW Trigger: CCAGCTGTGATGCAGCCTCCACCAGGCATGCCACTG...TGGGGCTTCTTGTCTGGGGTACCAAGATAGGGAAAGAAAGAAATAATGACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTCATTATTTCTTTCTTTCCCTATCTTGGTACCCCAGACAAGAAGCCCCAAGGCAGTGGCATGCCTaGTGGAGGCTGCATCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSHYFFLSLSWYPRQEAPRQWHA*WRLHHS Trigger: GCTGTGATGCAGCCTCCACCAGGCATGCCACTGCCT...TGGGGCTTCTTGTCTGGGGTACCAAGATAGGGAAAGAAAGAAATAATGACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | TTAAATAGCCCAGGATCCTCTTTGCTTCATACCAGGCAGCTCTTGAGTGTTTCCGCCAGGCTGAGGCACTaGTTGGCCAGGTGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LNSPGSSLLHTRQLLSVSARLRH*LARWLI Trigger: TATGAGCCACCTGGCCAACCAGTGCCTCAGCCTGGC...GGAAACACTCAAGAGCTGCCTGGTATGAAGCAAAGAGGATCCTGGGCTATTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCATTATTTCTTTCTTTCCCTATCTTGGTACCCCAGACAAGAAGCCCCACTATGGGACCAATACTGTaGCCGTGTGGCCCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLFLSFPILVPQTRSPTMGPIL*PCGPQG Trigger: GCCCTGGGGGCCACACGGCCACAGTATTGGTCCCAT...AGTGGGGCTTCTTGTCTGGGGTACCAAGATAGGGAAAGAAAGAAATAATGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGACCTTATACTTATACAGAAAAGGAGAAATGAGGGCCCTAGTAAGAGCATGGGACCAATACTGTaGCCGTGTGGCCCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDLILIQKRRNEGPSKSMGPIL*PCGPQG Trigger: GCCCTGGGGGCCACACGGCCACAGTATTGGTCCCAT...GCTCTTACTAGGGCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGTCCAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR TCA 90 bp | TTAAATAGCCCAGGATCCTCTTTGCTTCATACCAGGCAGCTCTTGAGTGTTTCCATGGCCTGCTGGCAGTaGGGACACACTGTCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LNSPGSSLLHTRQLLSVSMACWQ*GHTVCT Trigger: AGTGCAGACAGTGTGTCCTCACTGCCAGCAGGCCAT...GGAAACACTCAAGAGCTGCCTGGTATGAAGCAAAGAGGATCCTGGGCTATTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | ATGCCCTGGCCCAGAACAGCTGGGTTTCCCCAGGGCAGGTCTATATATATAAATAGGAGGGTAGAAACCTaGAGGCATGTAGGTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: MPWPRTAGFPQGRSIYINRRVET*RHVGAI Trigger: GATGGCACCTACATGCCTGCAGGTTTCTACCCTCCT...ATTTATATATATAGACCTGCCCTGGGGAAACCCAGCTGTTCTGGGCCAGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGTGAGGACAGGATTTCCAGAGTACAGTGGCAGAACTTCCAACCCTAAGCAGCTGGGACATGTGTaGGTCACATCCTTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKVRTGFPEYSGRTSNPKQLGHV*VTSLKS Trigger: TGACTTCAAGGATGTGACGCACACATGTCCCAGCTG...CTTAGGGTTGGAAGTTCTGCCACTGTACTCTGGAAATCCTGTCCTCACCTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGCAAGTCAACTATGGCAAAAAGGCTGGCACTTATTCCAGAGACCAATGAAGGCTGTAGGACCTCCTaGATAAGGAGGGGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSKSTMAKRLALIPETNEGCRTS*IRRGWL Trigger: GAGCCACCCCCTCCTTATCCAGGAGGTCCTACAGCC...TTCATTGGTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAGTTGACTTGCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | AGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAGGCAGTGGCATGCCTaGTGGAGGCTGCATCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLFVYHLEHSCQRHLVTARQWHA*WRLHHS Trigger: GCTGTGATGCAGCCTCCACCAGGCATGCCACTGCCT...CGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS-3UTR CCA 90 bp | CCAATATGGAAGCAAGTCAACTATGGCAAAAAGGCTGGCACTTATTCCAGAGACAGGGTAGGGCCCTGGTaGGTAGGGTCCTGGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: PIWKQVNYGKKAGTYSRDRVGPW*VGSWWI Trigger: TATCCACCAGGACCCTACCCACCAGGGCCCTACCCT...GTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAGTTGACTTGCTTCCATATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTAAGGACCAGCCTGGACCTTATACTTATACAGAAAAGGAGAAATGAGGGCGCAGTACTGTCACCGTaGTGGCTGCCCCTGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVRTSLDLILIQKRRNEGAVLSP*WLPLMG Trigger: TCCCATCAGGGGCAGCCACCACGGTGACAGTACTGC...GCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGTCCAGGCTGGTCCTTACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | AGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGGCAGTACTGTCACCGTaGTGGCTGCCCCTGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLFVYHLEHSCQRHLVTAAVLSP*WLPLMG Trigger: TCCCATCAGGGGCAGCCACCACGGTGACAGTACTGC...CGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| 3UTR CAA 72 bp | ACAAGATTAGTGCCACCCCATGCCACCCACTGGCCCTaGGCCTTAAATCCAACAGAATTGTTGCTGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLVPPHATHWP*ALNPTELLLEE Trigger: CTCTTCCAGCAACAATTCTGTTGGATTTAAGGCCAAGGGCCAGTGGGTGGCATGGGGTGGCACTAATCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CAA 72 bp | TCAGTGCCTTCCATTGATGCCATGTCTTATGTTGTGTaGCATGCAGGTACACTAGGAGGCAGCAACTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVPSIDAMSYVV*HAGTLGGSNCP Trigger: GGGGCAGTTGCTGCCTCCTAGTGTACCTGCATGCAACACAACATAAGACATGGCATCAATGGAAGGCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| CDS-3UTR TCA 90 bp | GCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACATGGCCTGCTGGCAGTaGGGACACACTGTCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: AQIICLPLRTQLSAPSCNMACWQ*GHTVCT Trigger: AGTGCAGACAGTGTGTCCTCACTGCCAGCAGGCCAT...GTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATCTAATTATGCAAATGGCAGAATGGTGGGTAGGGTCCTaGTGGATAATAGCCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSSQVLQPGHLIMQMAEWWVGS*WIIAHR Trigger: CCTATGGGCTATTATCCACCAGGACCCTACCCACCA...TTCTGCCATTTGCATAATTAGATGTCCAGGCTGCAGAACCTGAGAACTGGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTATACTTATACAGAAAAGGAGAAATGAGGGCCCTAGTAAGAGCCTCTCTAATGGGACCAATACTGTaGCCGTGTGGCCCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLYLYRKGEMRALVRASLMGPIL*PCGPQG Trigger: GCCCTGGGGGCCACACGGCCACAGTATTGGTCCCAT...TAGAGAGGCTCTTACTAGGGCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | CACACAGGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTGGGTTTATACCGTACTGTCACCGTGGTaGCTGCCCCTGATGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: HTGIFTDCSRNDQVWVYTVLSPW*LPLMGP Trigger: TGGTCCCATCAGGGGCAGCCACCACGGTGACAGTAC...GGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CAA 72 bp | GGCCTGGTACTACATGTGAAGGACCTGTCATGTTGTTaGCATCCTACCCCAAGTGACCTGTTCTATCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLVLHVKDLSCC*HPTPSDLFYPH Trigger: ATGGGGATAGAACAGGTCACTTGGGGTAGGATGCAAACAACATGACAGGTCCTTCACATGTAGTACCAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| CDS-3UTR TCA 90 bp | AGCTTATCTTCTGAATTGCAAATGTCCAAGCAACACACAAGATTAGTGCCACCCAGGAGATCTTGGTGGTaGTGGCCTGCTGGCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSELQMSKQHTRLVPPRRSWW*WPAGSE Trigger: CTCACTGCCAGCAGGCCATCACCACCAAGATCTCCT...GGGTGGCACTAATCTTGTGTGTTGCTTGGACATTTGCAATTCAGAAGATAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATCTAATTATGCAAATGGCAGAACAGCTGGGACATGTGTaGGTCACATCCTTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSSQVLQPGHLIMQMAEQLGHV*VTSLKS Trigger: TGACTTCAAGGATGTGACGCACACATGTCCCAGCTG...TTCTGCCATTTGCATAATTAGATGTCCAGGCTGCAGAACCTGAGAACTGGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTGGGTTTATACCTGGTGGGTAGGGTCCTaGAGGCATGTAGGTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HTGIFTDCSRNDQVWVYTWWVGS*RHVGAI Trigger: GATGGCACCTACATGCCTGCAGGACCCTACCCACCA...GGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117713.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGCCTCTCTAGCTTATCTTCTGAATTGCAAATGTCCAAGCAACACACAACAGTGGCATGCCTGGTaGAGGCTGCATCACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRASLAYLLNCKCPSNTQQWHAW*RLHHSW Trigger: CCAGCTGTGATGCAGCCTCCACCAGGCATGCCACTG...TTGTGTGTTGCTTGGACATTTGCAATTCAGAAGATAAGCTAGAGAGGCTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTATACTTATACAGAAAAGGAGAAATGAGGGCCCTAGTAAGAGCCTCTCTAGCCAGGCTGAGGCACTaGTTGGCCAGGTGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TLYLYRKGEMRALVRASLARLRH*LARWLI Trigger: TATGAGCCACCTGGCCAACCAGTGCCTCAGCCTGGC...TAGAGAGGCTCTTACTAGGGCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTATACTTATACAGAAAAGGAGAAATGAGGGCCCTAGTAAGAGCCTCTCTAATGGCCTGCTGGCAGTaGGGACACACTGTCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TLYLYRKGEMRALVRASLMACWQ*GHTVCT Trigger: AGTGCAGACAGTGTGTCCTCACTGCCAGCAGGCCAT...TAGAGAGGCTCTTACTAGGGCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCCTACTGAGGAGCTCCAATATGGAAGCAAGTCAACTATGGCAAAAAGGCCTGCAGGCATGTAGGTaGCATCTGCATTCATATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLLRSSNMEASQLWQKGLQACR*HLHSYG Trigger: CCCATATGAATGCAGATGGCACCTACATGCCTGCAG...GCCTTTTTGCCATAGTTGACTTGCTTCCATATTGGAGCTCCTCAGTAGGAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTAAGGACCAGCCTGGACCTTATACTTATACAGAAAAGGAGAAATGAGGGCTGCAGATGTAGGCTTTaGAGCTGGGACATGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RVRTSLDLILIQKRRNEGCRCRL*SWDMCA Trigger: CGCACACATGTCCCAGCTGCAAAGCCTACATCTGCA...GCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGTCCAGGCTGGTCCTTACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | GCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACTGGTGGGTAGGGTCCTaGTGGATAATAGCCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQIICLPLRTQLSAPSCNWWVGS*WIIAHR Trigger: CCTATGGGCTATTATCCACCAGGACCCTACCCACCA...GTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTGGGTTTATACCCTGGCTGCAGGCATGTAGGTaGCATCTGCATTCATATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QAYSQTVQEMTRFGFIPWLQACR*HLHSYG Trigger: CCCATATGAATGCAGATGGCACCTACATGCCTGCAG...CCAGGGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | CCAATATGGAAGCAAGTCAACTATGGCAAAAAGGCTGGCACTTATTCCAGAGACTCAAAGATCTCTCCCTaGAGTACTGTCACCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PIWKQVNYGKKAGTYSRDSKISP*STVTVV Trigger: CACCACGGTGACAGTACTGCAGGGAGAGATCTTTGA...GTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAGTTGACTTGCTTCCATATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGACCTTATACTTATACAGAAAAGGAGAAATGAGGGCCCTAGTAAGAGCTCAAAGATCTCTCCCTaGAGTACTGTCACCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLDLILIQKRRNEGPSKSSKISP*STVTVV Trigger: CACCACGGTGACAGTACTGCAGGGAGAGATCTTTGA...GCTCTTACTAGGGCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGTCCAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGCAAGTCAACTATGGCAAAAAGGCTGGCACTTATTCCAGAGACCAATGAATCAAAGATCTCTCCCTaGAGTACTGTCACCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSKSTMAKRLALIPETNESKISP*STVTVV Trigger: CACCACGGTGACAGTACTGCAGGGAGAGATCTTTGA...TTCATTGGTCTCTGGAATAAGTGCCAGCCTTTTTGCCATAGTTGACTTGCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTGGGTTTATACCTGCAGATGTAGGCTTTaGAGCTGGGACATGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: HTGIFTDCSRNDQVWVYTCRCRL*SWDMCA Trigger: CGCACACATGTCCCAGCTGCAAAGCCTACATCTGCA...GGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGCCTCTCTAGCTTATCTTCTGAATTGCAAATGTCCAAGCAACACACAATGGTGGGTAGGGTCCTaGTGGATAATAGCCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRASLAYLLNCKCPSNTQWWVGS*WIIAHR Trigger: CCTATGGGCTATTATCCACCAGGACCCTACCCACCA...TTGTGTGTTGCTTGGACATTTGCAATTCAGAAGATAAGCTAGAGAGGCTCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | AGATTGATTTACCAAGAACTGAGTGCCGAGACTTCAGTGTGTCATCTTCAGACTACAAGCGCTTGTATGTaGAGATGTAGGCTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLIYQELSAETSVCHLQTTSACM*RCRLCS Trigger: GCTGCAAAGCCTACATCTGCACATACAAGCGCTTGT...AGTCTGAAGATGACACACTGAAGTCTCGGCACTCAGTTCTTGGTAAATCAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTGGGTTTATACCACAAGCGCTTGTATGTaGAGATGTAGGCTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTGIFTDCSRNDQVWVYTTSACM*RCRLCS Trigger: GCTGCAAAGCCTACATCTGCACATACAAGCGCTTGT...GGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CAA 72 bp | GGCCCTAGTAAGAGCCTCTCTAGCTTATCTTCTGAATaGCAAATGTCCAAGCAACACACAAGATTAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPSKSLSSLSSE*QMSKQHTRLVP Trigger: TGGCACTAATCTTGTGTGTTGCTTGGACATTTGCAATTCAGAAGATAAGCTAGAGAGGCTCTTACTAGGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| 3UTR CAA 72 bp | GCTGTCACTCTATTAACAGCCAGTGCTCTAGGAATTTaGCCATTTAGGAGGCCTGGGTACATTGCTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AVTLLTASALGI*PFRRPGYIAFL Trigger: TAAGAAAGCAATGTACCCAGGCCTCCTAAATGGCAAAATTCCTAGAGCACTGGCTGTTAATAGAGTGACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004173.12 |
||
| CDS-3UTR GCA 90 bp | ACCTTATACTTATACAGAAAAGGAGAAATGAGGGCCCTAGTAAGAGCCTCTCTAACAAGCGCTTGTATGTaGAGATGTAGGCTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLYLYRKGEMRALVRASLTSACM*RCRLCS Trigger: GCTGCAAAGCCTACATCTGCACATACAAGCGCTTGT...TAGAGAGGCTCTTACTAGGGCCCTCATTTCTCCTTTTCTGTATAAGTATAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS CCA 90 bp | CAATACTGTGGCCGTGTGGCCCCCAGGGCCAGGGTAGGGCCCTGGTaGGTAGGGTCCTGGTGGATAATAGCCCATAGGTGGGTGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QYCGRVAPRARVGPW*VGSWWIIAHRWVRP Trigger: GGGCCTCACCCACCTATGGGCTATTATCCACCAGGACCCTACCCACCAGGGCCCTACCCTGGCCCTGGGGGCCACACGGCCACAGTATTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 ENSMUST00000147225.8 |
||
| CDS CCA 90 bp | GACCAATACTGTGGCCGTGTGGCCCCCAGGGCCAGGGTAGGGCCCTaGTGGGTAGGGTCCTGGTGGATAATAGCCCATAGGTGGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQYCGRVAPRARVGP*WVGSWWIIAHRWVR Trigger: CCTCACCCACCTATGGGCTATTATCCACCAGGACCCTACCCACCAGGGCCCTACCCTGGCCCTGGGGGCCACACGGCCACAGTATTGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 ENSMUST00000147225.8 |
||
| CDS CCA 90 bp | CACAAAGCCAGGCTGAGGCACTGGTTGGCCAGGTGGCTCATAGGGTaGAGGGGCAATGTCAGCAGAAGGCAGTGGCATGCCTGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HKARLRHWLARWLIG*RGNVSRRQWHAWWR Trigger: CCTCCACCAGGCATGCCACTGCCTTCTGCTGACATTGCCCCTCCACCCTATGAGCCACCTGGCCAACCAGTGCCTCAGCCTGGCTTTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
||
| CDS CCA 90 bp | CTGGTGCGCCTTCAAAGATCTCTCCCTGCAGTACTGTCACCGTGGTaGCTGCCCCTGATGGGACCAATACTGTGGCCGTGTGGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVRLQRSLPAVLSPW*LPLMGPILWPCGPQ Trigger: CTGGGGGCCACACGGCCACAGTATTGGTCCCATCAGGGGCAGCCACCACGGTGACAGTACTGCAGGGAGAGATCTTTGAAGGCGCACCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
||
| CDS CCA 90 bp | GCACTGGTGCGCCTTCAAAGATCTCTCCCTGCAGTACTGTCACCGTaGTGGCTGCCCCTGATGGGACCAATACTGTGGCCGTGTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALVRLQRSLPAVLSP*WLPLMGPILWPCGP Trigger: GGGGCCACACGGCCACAGTATTGGTCCCATCAGGGGCAGCCACCACGGTGACAGTACTGCAGGGAGAGATCTTTGAAGGCGCACCAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
||
| CDS TCA 90 bp | TTCAAAGATCTCTCCCTGCAGTACTGTCACCGTGGTGGCTGCCCCTaGTGGGACCAATACTGTGGCCGTGTGGCCCCCAGGGCCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FKDLSLQYCHRGGCP*WDQYCGRVAPRARV Trigger: TACCCTGGCCCTGGGGGCCACACGGCCACAGTATTGGTCCCATCAGGGGCAGCCACCACGGTGACAGTACTGCAGGGAGAGATCTTTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGAAGGGCAGGTCCTGTCAGAGCCATGTTTGCCATGCTTCGACGGGCTCTAGGCTGAGGCACTGGTaGGCCAGGTGGCTCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: REKGRSCQSHVCHASTGSRLRHW*ARWLIG Trigger: CCCTATGAGCCACCTGGCCAACCAGTGCCTCAGCCT...AGAGCCCGTCGAAGCATGGCAAACATGGCTCTGACAGGACCTGCCCTTCTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147225.8 |
||
| CDS GCA 90 bp | GGTGGTGATGGCCTGCTGGCAGTGAGGACACACTGTCTGCACTGGTaGGCCTTCAAAGATCTCTCCCTGCAGTACTGTCACCGTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGDGLLAVRTHCLHW*AFKDLSLQYCHRGG Trigger: GCCACCACGGTGACAGTACTGCAGGGAGAGATCTTTGAAGGCGCACCAGTGCAGACAGTGTGTCCTCACTGCCAGCAGGCCATCACCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
||
| CDS CCA 90 bp | CTTGGTGGTGATGGCCTGCTGGCAGTGAGGACACACTGTCTGCACTaGTGCGCCTTCAAAGATCTCTCCCTGCAGTACTGTCACCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGGDGLLAVRTHCLH*CAFKDLSLQYCHRG Trigger: ACCACGGTGACAGTACTGCAGGGAGAGATCTTTGAAGGCGCACCAGTGCAGACAGTGTGTCCTCACTGCCAGCAGGCCATCACCACCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAACAGAATTGTTGCTGGAAGAGTCGGATGCTCAGGGAAGGGCAAGGTGAGAGGCTGAGGCACTGGTaGGCCAGGTGGCTCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IQQNCCWKSRMLREGQGERLRHW*ARWLIG Trigger: CCCTATGAGCCACCTGGCCAACCAGTGCCTCAGCCT...CTCACCTTGCCCTTCCCTGAGCATCCGACTCTTCCAGCAACAATTCTGTTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CAA 90 bp | AGACGGGGCTCCAGTTCTCAGGTTCTGCAGCCTGGACATCTAATTATGCAAATGAGGCTGAGGCACTGGTaGGCCAGGTGGCTCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRGSSSQVLQPGHLIMQMRLRHW*ARWLIG Trigger: CCCTATGAGCCACCTGGCCAACCAGTGCCTCAGCCT...CATTTGCATAATTAGATGTCCAGGCTGCAGAACCTGAGAACTGGAGCCCCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTGGGTTTATACCCTGGAGGCTGAGGCACTGGTaGGCCAGGTGGCTCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QAYSQTVQEMTRFGFIPWRLRHW*ARWLIG Trigger: CCCTATGAGCCACCTGGCCAACCAGTGCCTCAGCCT...CCAGGGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CAA 90 bp | TCATTCCAGCAGGTCAGCAACAACTGTGGTTCCAGGTTCTACCCTCAGTGTAGGGTGTGCGTCACATCCTaGAAGTCATTGATGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SFQQVSNNCGSRFYPQCRVCVTS*KSLMRQ Trigger: CTGCCTCATCAATGACTTCAAGGATGTGACGCACAC...CCTACACTGAGGGTAGAACCTGGAACCACAGTTGTTGCTGACCTGCTGGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTCCTACTGAGGAGCTCCAATATGGAAGCAAGTCAACTATGGCAAAAAGGCGTGTGCGTCACATCCTaGAAGTCATTGATGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFLLRSSNMEASQLWQKGVCVTS*KSLMRQ Trigger: CTGCCTCATCAATGACTTCAAGGATGTGACGCACAC...GCCTTTTTGCCATAGTTGACTTGCTTCCATATTGGAGCTCCTCAGTAGGAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
||
| CDS-3UTR CAA 90 bp | CACACAGGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTGGGTTTATACCGTGTGCGTCACATCCTaGAAGTCATTGATGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: HTGIFTDCSRNDQVWVYTVCVTS*KSLMRQ Trigger: CTGCCTCATCAATGACTTCAAGGATGTGACGCACAC...GGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| CDS-3UTR CAA 90 bp | CAGGCATATTCACAGACTGTTCAAGAAATGACCAGGTTTGGGTTTATACCCTGGACATCCTTGAAGTCATaGATGAGGCAGGGGATCAAA | + |
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Preference number: 5 (lower is better) Translates to: QAYSQTVQEMTRFGFIPWTSLKS*MRQGIK Trigger: TTTGATCCCCTGCCTCATCAATGACTTCAAGGATGT...CCAGGGTATAAACCCAAACCTGGTCATTTCTTGAACAGTCTGTGAATATGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 |
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| CDS CCA 72 bp | TCACCGTGGTGGCTGCCCCTGATGGGACCAATACTGTaGCCGTGTGGCCCCCAGGGCCAGGGTAGGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SPWWLPLMGPIL*PCGPQGQGRAL Trigger: CAGGGCCCTACCCTGGCCCTGGGGGCCACACGGCCACAGTATTGGTCCCATCAGGGGCAGCCACCACGGTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
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| CDS TCA 72 bp | CTCTCCCTGCAGTACTGTCACCGTGGTGGCTGCCCCTaGTGGGACCAATACTGTGGCCGTGTGGCCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSLQYCHRGGCP*WDQYCGRVAPR Trigger: CCTGGGGGCCACACGGCCACAGTATTGGTCCCATCAGGGGCAGCCACCACGGTGACAGTACTGCAGGGAGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
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| CDS CCA 72 bp | AGGGCCAGGGTAGGGCCCTGGTGGGTAGGGTCCTGGTaGATAATAGCCCATAGGTGGGTGAGGCCCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RARVGPWWVGSW*IIAHRWVRPWR Trigger: CCTCCAGGGCCTCACCCACCTATGGGCTATTATCCACCAGGACCCTACCCACCAGGGCCCTACCCTGGCCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004173.12 ENSMUST00000118703.8 ENSMUST00000147225.8 |
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| CDS CCA 72 bp | AGGCTGAGGCACTGGTTGGCCAGGTGGCTCATAGGGTaGAGGGGCAATGTCAGCAGAAGGCAGTGGCATGCC | + |
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Preference number: 6 (lower is better) Translates to: RLRHWLARWLIG*RGNVSRRQWHA Trigger: GGCATGCCACTGCCTTCTGCTGACATTGCCCCTCCACCCTATGAGCCACCTGGCCAACCAGTGCCTCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
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| CDS TCA 72 bp | CAGTGGCATGCCTGGTGGAGGCTGCATCACAGCTGGTaGGGTTCGGCCTGGGGTAAGTGGGGCTCCACTTTT | + |
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Preference number: 6 (lower is better) Translates to: QWHAWWRLHHSW*GSAWGKWGSTF Trigger: AAAAGTGGAGCCCCACTTACCCCAGGCCGAACCTCACCAGCTGTGATGCAGCCTCCACCAGGCATGCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
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| CDS GCA 72 bp | ATGTCAGCAGAAGGCAGTGGCATGCCTGGTGGAGGCTaGATCACAGCTGGTGAGGTTCGGCCTGGGGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: MSAEGSGMPGGG*ITAGEVRPGVS Trigger: ACTTACCCCAGGCCGAACCTCACCAGCTGTGATGCAGCCTCCACCAGGCATGCCACTGCCTTCTGCTGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
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| CDS GCA 72 bp | ACTGTCTGCACTGGTGCGCCTTCAAAGATCTCTCCCTaGAGTACTGTCACCGTGGTGGCTGCCCCTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: TVCTGAPSKISP*STVTVVAAPDG Trigger: CCCATCAGGGGCAGCCACCACGGTGACAGTACTGCAGGGAGAGATCTTTGAAGGCGCACCAGTGCAGACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
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| CDS CCA 72 bp | CGCCTTCAAAGATCTCTCCCTGCAGTACTGTCACCGTaGTGGCTGCCCCTGATGGGACCAATACTGTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RLQRSLPAVLSP*WLPLMGPILWP Trigger: CGGCCACAGTATTGGTCCCATCAGGGGCAGCCACCACGGTGACAGTACTGCAGGGAGAGATCTTTGAAGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
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| CDS CCA 72 bp | CTTCAAAGATCTCTCCCTGCAGTACTGTCACCGTGGTaGCTGCCCCTGATGGGACCAATACTGTGGCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: LQRSLPAVLSPW*LPLMGPILWPC Trigger: ACACGGCCACAGTATTGGTCCCATCAGGGGCAGCCACCACGGTGACAGTACTGCAGGGAGAGATCTTTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
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| CDS CCA 72 bp | GATGGCCTGCTGGCAGTGAGGACACACTGTCTGCACTaGTGCGCCTTCAAAGATCTCTCCCTGCAGTACTGT | + |
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Preference number: 6 (lower is better) Translates to: DGLLAVRTHCLH*CAFKDLSLQYC Trigger: ACAGTACTGCAGGGAGAGATCTTTGAAGGCGCACCAGTGCAGACAGTGTGTCCTCACTGCCAGCAGGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004173.12 ENSMUST00000117713.8 ENSMUST00000118703.8 ENSMUST00000147225.8 |
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