Pregenerated sensors for CDIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040282Ensembl transcript IDs: ENSMUST00000110918.3, ENSMUST00000166472.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTAAGGTTGTTCCTGCCGGCCGCCAGTCTGCTTTAGAGGGCCACTaGAGACCAGAGGCCGGGGTGCAGTCCTCTGCTGCAGCCCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: AKVVPAGRQSALEGH*RPEAGVQSSAAAPS Trigger: GCTGGGGGCTGCAGCAGAGGACTGCACCCCGGCCTCTGGTCTGCAGTGGCCCTCTAAAGCAGACTGGCGGCCGGCAGGAACAACCTTAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR TCA 90 bp | CAGGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTaGGCCCCAGGTGAGAAGGAACATTTACTTACGGACTTCCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: QEATRLHRKTPGGLC*APGEKEHLLTDFLS Trigger: AGACAGGAAGTCCGTAAGTAAATGTTCCTTCTCACCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR TCA 90 bp | CAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGTaGGAAGGAACATTTACTTACGGACTTCCTGTCTCCAGCTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: QAPQKDSGRPLLSPR*EGTFTYGLPVSSFS Trigger: AGAAAAGCTGGAGACAGGAAGTCCGTAAGTAAATGTTCCTTCTCACCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR GCA 90 bp | AAAGAGGAAATTCTCATCGAGGGGGACTTGTGCAGCTTGGCTGAATaGCACAGAAGTCAGGAGGCCACCAGGCTCCACAGAAAGACTCCG | + |
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Preference number: 1 (lower is better) Translates to: KEEILIEGDLCSLAE*HRSQEATRLHRKTP Trigger: CGGAGTCTTTCTGTGGAGCCTGGTGGCCTCCTGACTTCTGTGGCATTCAGCCAAGCTGCACAAGTCCCCCTCGATGAGAATTTCCTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR TCA 90 bp | CGCCAAACCTGCACGCTGTATTCTAGGTGGAAACAGGCGTTTGCCTaGCACTGCCTTACCCATAACCCTACCTTCTCTCCCGTGATTTCC | + |
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Preference number: 1 (lower is better) Translates to: RQTCTLYSRWKQAFA*HCLTHNPTFSPVIS Trigger: GGAAATCACGGGAGAGAAGGTAGGGTTATGGGTAAGGCAGTGTCAGGCAAACGCCTGTTTCCACCTAGAATACAGCGTGCAGGTTTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR GCA 90 bp | GGCTGCGACGGCAGCAAGGGTTCATCTCAAGTTCAGGGCAGATGCTaGCAGCAGTTTATACTGCAGGAAAGTAACATTGCTTCCGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: GCDGSKGSSQVQGRC*QQFILQESNIASGF Trigger: GAAGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCATCTGCCCTGAACTTGAGATGAACCCTTGCTGCCGTCGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR TCA 90 bp | TCTCTCAGGAGAGCTGAAAATCCTGTCTTGGACCTGCCACCCTTGTaGCCCTTGGGAGGAAGGCAACAGACCAAGTTTCTCACTAACCAG | + |
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Preference number: 1 (lower is better) Translates to: SLRRAENPVLDLPPL*PLGGRQQTKFLTNQ Trigger: CTGGTTAGTGAGAAACTTGGTCTGTTGCCTTCCTCCCAAGGGTCACAAGGGTGGCAGGTCCAAGACAGGATTTTCAGCTCTCCTGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR CCA 90 bp | CTTTATGAAAAGAGGAAATTCTCATCGAGGGGGACTTGTGCAGCTTaGCTGAATGCCACAGAAGTCAGGAGGCCACCAGGCTCCACAGAA | + |
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Preference number: 1 (lower is better) Translates to: LYEKRKFSSRGTCAA*LNATEVRRPPGSTE Trigger: TTCTGTGGAGCCTGGTGGCCTCCTGACTTCTGTGGCATTCAGCCAAGCTGCACAAGTCCCCCTCGATGAGAATTTCCTCTTTTCATAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR TCA 90 bp | CAGCTAGAGGAGCATGGTTTTCCAGACACAGCGGCAACTCATACTTaGAGAGGAGGTCAGCCTTGTGAAGGGTTTGGTGTTCACATCAAC | + |
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Preference number: 1 (lower is better) Translates to: QLEEHGFPDTAATHT*RGGQPCEGFGVHIN Trigger: GTTGATGTGAACACCAAACCCTTCACAAGGCTGACCTCCTCTTCAAGTATGAGTTGCCGCTGTGTCTGGAAAACCATGCTCCTCTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR GCA 90 bp | AGGGTTCATCTCAAGTTCAGGGCAGATGCTGCCAGCAGTTTATACTaGAGGAAAGTAACATTGCTTCCGGCTTCTCTTCCAGGATCTTCG | + |
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Preference number: 1 (lower is better) Translates to: RVHLKFRADAASSLY*RKVTLLPASLPGSS Trigger: CGAAGATCCTGGAAGAGAAGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCATCTGCCCTGAACTTGAGATGAACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR TCA 90 bp | GAGGAGGTCAGCCTTGTGAAGGGTTTGGTGTTCACATCAACTTTATaGAAAGAGGAAATTCTCATCGAGGGGGACTTGTGCAGCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: EEVSLVKGLVFTSTL*KEEILIEGDLCSLA Trigger: AGCCAAGCTGCACAAGTCCCCCTCGATGAGAATTTCCTCTTTTCATAAAGTTGATGTGAACACCAAACCCTTCACAAGGCTGACCTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR TCA 90 bp | TCCAGACACAGCGGCAACTCATACTTGAAGAGGAGGTCAGCCTTGTaGAGGGTTTGGTGTTCACATCAACTTTATGAAAAGAGGAAATTC | + |
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Preference number: 1 (lower is better) Translates to: SRHSGNSYLKRRSAL*RVWCSHQLYEKRKF Trigger: GAATTTCCTCTTTTCATAAAGTTGATGTGAACACCAAACCCTTCACAAGGCTGACCTCCTCTTCAAGTATGAGTTGCCGCTGTGTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGCACATCACCCAGGGATaGAGGAAAACAGAAACTCCT | + |
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Preference number: 2 (lower is better) Translates to: RRPPGSTERLRAASAEPQHITQG*RKTETP Trigger: AGGAGTTTCTGTTTTCCTTCATCCCTGGGTGATGTG...CTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGTGCAAGTTCAGGGCAGATaGTGCCAGCAGTTTATACTG | + |
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Preference number: 2 (lower is better) Translates to: RPPGSTERLRAASAEPQVQVQGR*CQQFIL Trigger: CAGTATAAACTGCTGGCAGCATCTGCCCTGAACTTG...CACCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGTGTGTCTGCAGTTCTTaGCTATTCACATCACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RRPPGSTERLRAASAEPQCVCSS*LFTSPR Trigger: CCTGGGTGATGTGAATAGCCAAGAACTGCAGACACA...CTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTAGAGGGCCACTGCAGACCAGAGGCCGGGGTGCAGTCCTCTGCTGCAGCCCAAGTTCAGGGCAGATaGTGCCAGCAGTTTATACTG | + |
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Preference number: 2 (lower is better) Translates to: ALEGHCRPEAGVQSSAAAQVQGR*CQQFIL Trigger: CAGTATAAACTGCTGGCAGCATCTGCCCTGAACTTG...GGCTGCAGCAGAGGACTGCACCCCGGCCTCTGGTCTGCAGTGGCCCTCTAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGTGGAAAACAGAAACTCCTaGTATGTTTGTCTAGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: RPPGSTERLRAASAEPQVENRNS*YVCLEV Trigger: TACCTCTAGACAAACATATCAGGAGTTTCTGTTTTC...CACCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTCCTGTACTCTCTCAGGAGAGCTGAAAATCCTGTCTTGGACCTGCCACCCTCTTGTGCAGCTTGGCTaGATGCCACAGAAGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ISCTLSGELKILSWTCHPLVQLG*MPQKSG Trigger: TCCTGACTTCTGTGGCATTCAGCCAAGCTGCACAAG...AGGGTGGCAGGTCCAAGACAGGATTTTCAGCTCTCCTGAGAGAGTACAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAACTCCTGATATGTTTGTCTAGAGGTAGGGCTGCGACGGCAGCAAGGGTTGTTCAGGGCAGATGCTaGCAGCAGTTTATACTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QKLLICLSRGRAATAARVVQGRC*QQFILQ Trigger: CTGCAGTATAAACTGCTGGCAGCATCTGCCCTGAAC...AACCCTTGCTGCCGTCGCAGCCCTACCTCTAGACAAACATATCAGGAGTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR CCA 90 bp | GGACCTGCCACCCTTGTGACCCTTGGGAGGAAGGCAACAGACCAAGTTTCTCACAATGCTGATAATGAGTaGGTTGTGTCTGCAGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: GPATLVTLGRKATDQVSHNADNE*VVSAVL Trigger: AAGAACTGCAGACACAACCCACTCATTATCAGCATT...GTGAGAAACTTGGTCTGTTGCCTTCCTCCCAAGGGTCACAAGGGTGGCAGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGTGCAGGAAAGTAACATaGCTTCCGGCTTCTCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: GGHQAPQKDSGRPLLSPRCRKVT*LPASLP Trigger: TGGAAGAGAAGCCGGAAGCAATGTTACTTTCCTGCA...CCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGTTGTGTCTGCAGTTCTaGGCTATTCACATCACCCAG | + |
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Preference number: 3 (lower is better) Translates to: GGHQAPQKDSGRPLLSPRLCLQF*AIHITQ Trigger: CTGGGTGATGTGAATAGCCAAGAACTGCAGACACAA...CCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGCTGATAATGAGTGGGTaGTGTCTGCAGTTCTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: GGHQAPQKDSGRPLLSPRLIMSG*CLQFLA Trigger: AGCCAAGAACTGCAGACACAACCCACTCATTATCAG...CCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTTAGAGGGCCACTGCAGACCAGAGGCCGGGGTGCAGTCCTCTGCTGCAGCCTTGTGTCTGCAGTTCTaGGCTATTCACATCACCCAG | + |
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Preference number: 3 (lower is better) Translates to: ALEGHCRPEAGVQSSAAALCLQF*AIHITQ Trigger: CTGGGTGATGTGAATAGCCAAGAACTGCAGACACAA...GGCTGCAGCAGAGGACTGCACCCCGGCCTCTGGTCTGCAGTGGCCCTCTAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR TCA 72 bp | ACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTaGGCCCCAGGTGAGAAGGAACATTTACTTACGGAC | + |
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Preference number: 3 (lower is better) Translates to: TRLHRKTPGGLC*APGEKEHLLTD Trigger: GTCCGTAAGTAAATGTTCCTTCTCACCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR CCA 72 bp | AAGAGGAAATTCTCATCGAGGGGGACTTGTGCAGCTTaGCTGAATGCCACAGAAGTCAGGAGGCCACCAGGC | + |
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Preference number: 3 (lower is better) Translates to: KRKFSSRGTCAA*LNATEVRRPPG Trigger: GCCTGGTGGCCTCCTGACTTCTGTGGCATTCAGCCAAGCTGCACAAGTCCCCCTCGATGAGAATTTCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR CCA 72 bp | TGCAGTCCTCTGCTGCAGCCCCCAGCTAGAGGAGCATaGTTTTCCAGACACAGCGGCAACTCATACTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: CSPLLQPPARGA*FSRHSGNSYLK Trigger: CTTCAAGTATGAGTTGCCGCTGTGTCTGGAAAACCATGCTCCTCTAGCTGGGGGCTGCAGCAGAGGACTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR CCA 72 bp | TCCTGTACTCTCTCAGGAGAGCTGAAAATCCTGTCTTaGACCTGCCACCCTTGTGACCCTTGGGAGGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: SCTLSGELKILS*TCHPCDPWEEG Trigger: GCCTTCCTCCCAAGGGTCACAAGGGTGGCAGGTCCAAGACAGGATTTTCAGCTCTCCTGAGAGAGTACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR GCA 72 bp | ACTCTCTCAGGAGAGCTGAAAATCCTGTCTTGGACCTaGCACCCTTGTGACCCTTGGGAGGAAGGCAACAGA | + |
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Preference number: 3 (lower is better) Translates to: TLSGELKILSWT*HPCDPWEEGNR Trigger: TCTGTTGCCTTCCTCCCAAGGGTCACAAGGGTGGCAGGTCCAAGACAGGATTTTCAGCTCTCCTGAGAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR TCA 72 bp | TGCACGCTGTATTCTAGGTGGAAACAGGCGTTTGCCTaGCACTGCCTTACCCATAACCCTACCTTCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: CTLYSRWKQAFA*HCLTHNPTFSP Trigger: GGGAGAGAAGGTAGGGTTATGGGTAAGGCAGTGTCAGGCAAACGCCTGTTTCCACCTAGAATACAGCGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR CCA 72 bp | AAAATCCTGTCTTGGACCTGCCACCCTTGTGACCCTTaGGAGGAAGGCAACAGACCAAGTTTCTCACTAACC | + |
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Preference number: 3 (lower is better) Translates to: KILSWTCHPCDP*EEGNRPSFSLT Trigger: GGTTAGTGAGAAACTTGGTCTGTTGCCTTCCTCCCAAGGGTCACAAGGGTGGCAGGTCCAAGACAGGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR GCA 72 bp | CTCAAGTTCAGGGCAGATGCTGCCAGCAGTTTATACTaGAGGAAAGTAACATTGCTTCCGGCTTCTCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: LKFRADAASSLY*RKVTLLPASLP Trigger: TGGAAGAGAAGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCATCTGCCCTGAACTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR GCA 72 bp | GGCAGCAAGGGTTCATCTCAAGTTCAGGGCAGATGCTaGCAGCAGTTTATACTGCAGGAAAGTAACATTGCT | + |
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Preference number: 3 (lower is better) Translates to: GSKGSSQVQGRC*QQFILQESNIA Trigger: AGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCATCTGCCCTGAACTTGAGATGAACCCTTGCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR GCA 72 bp | GACGGCAGCAAGGGTTCATCTCAAGTTCAGGGCAGATaGTGCCAGCAGTTTATACTGCAGGAAAGTAACATT | + |
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Preference number: 3 (lower is better) Translates to: DGSKGSSQVQGR*CQQFILQESNI Trigger: AATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCATCTGCCCTGAACTTGAGATGAACCCTTGCTGCCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR CCA 90 bp | GGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGTGGCCTGCGATTGACTaGGGAACCTCTGCTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GGHQAPQKDSGRPLLSPRWPAID*GTSASA Trigger: AGCTGAAGCAGAGGTTCCCCAGTCAATCGCAGGCCA...CCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR TCA 90 bp | AGGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGCCCTTTGCACGGAGCTaGTCCTCATCTAGGAACGAC | + |
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Preference number: 4 (lower is better) Translates to: RRPPGSTERLRAASAEPQPFARS*SSSRND Trigger: GTCGTTCCTAGATGAGGATCAGCTCCGTGCAAAGGG...CTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR TCA 90 bp | AGGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGATCCATACCAATAGATaGCCAGGCCTGGTCCAAACC | + |
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Preference number: 4 (lower is better) Translates to: RRPPGSTERLRAASAEPQIHTNR*PGLVQT Trigger: GGTTTGGACCAGGCCTGGTCATCTATTGGTATGGAT...CTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR CCA 90 bp | GCTTTAGAGGGCCACTGCAGACCAGAGGCCGGGGTGCAGTCCTCTGCTGCAGCCACAGACACTAGGCACTaGGCTATCTCCTCGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: ALEGHCRPEAGVQSSAAATDTRH*AISSYW Trigger: CCAGTACGAGGAGATAGCCCAGTGCCTAGTGTCTGT...GGCTGCAGCAGAGGACTGCACCCCGGCCTCTGGTCTGCAGTGGCCCTCTAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR TCA 90 bp | GGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGATCGCTTCTGGAGTGTaGTGTTTGGCATGTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GGHQAPQKDSGRPLLSPRIASGV*CLACVL Trigger: AAGAACACATGCCAAACATCACACTCCAGAAGCGAT...CCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGTGATCGCTTCTGGAGTGTaGTGTTTGGCATGTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RPPGSTERLRAASAEPQVIASGV*CLACVL Trigger: AAGAACACATGCCAAACATCACACTCCAGAAGCGAT...CACCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR GCA 90 bp | GGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGAACAGTCATTCACGATaGACTGATAGACCTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: GGHQAPQKDSGRPLLSPRNSHSR*TDRPGL Trigger: CAAACCAGGTCTATCAGTGCATCGTGAATGACTGTT...CCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR CCA 90 bp | GCTTTAGAGGGCCACTGCAGACCAGAGGCCGGGGTGCAGTCCTCTGCTGCAGCCACTTTCAATCGCTTCTaGAGTGTGATGTTTGGCATG | + |
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Preference number: 4 (lower is better) Translates to: ALEGHCRPEAGVQSSAAATFNRF*SVMFGM Trigger: CATGCCAAACATCACACTCCAGAAGCGATTGAAAGT...GGCTGCAGCAGAGGACTGCACCCCGGCCTCTGGTCTGCAGTGGCCCTCTAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGTGCTTTTAATATGTTTCTaGTACTCCTGGGAGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: RPPGSTERLRAASAEPQVLLICF*YSWEKM Trigger: CATCTTCTCCCAGGAGTACCAGAAACATATTAAAAG...CACCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR CCA 90 bp | GGACCTGCCACCCTTGTGACCCTTGGGAGGAAGGCAACAGACCAAGTTTCTCACAACAGACTTGGAGGGTaGAGTCTGTTCATGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GPATLVTLGRKATDQVSHNRLGG*SLFMPL Trigger: CAGGGGCATGAACAGACTCCACCCTCCAAGTCTGTT...GTGAGAAACTTGGTCTGTTGCCTTCCTCCCAAGGGTCACAAGGGTGGCAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| 3UTR CAA 72 bp | AAAGAGGAAATTCTCATCGAGGGGGACTTGTGCAGCTaGGCTGAATGCCACAGAAGTCAGGAGGCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: KEEILIEGDLCS*AECHRSQEATR Trigger: CCTGGTGGCCTCCTGACTTCTGTGGCATTCAGCCAAGCTGCACAAGTCCCCCTCGATGAGAATTTCCTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS-3UTR CCA 90 bp | CAGAAACTCCTGATATGTTTGTCTAGAGGTAGGGCTGCGACGGCAGCAAGGGTTAGATGCTCAGCAGAGTaGCCTGCGATTGACTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKLLICLSRGRAATAARVRCSAE*PAIDWG Trigger: TCCCCAGTCAATCGCAGGCCACTCTGCTGAGCATCT...AACCCTTGCTGCCGTCGCAGCCCTACCTCTAGACAAACATATCAGGAGTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCAGCAGTTTATACTGCAGGAAAGTAACATTGCTTCCGGCTTCTCTTCCAGAGTGGCCTGCGATTaGCTGGGGAACCTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCQQFILQESNIASGFSSRVACD*LGNLCF Trigger: GAAGCAGAGGTTCCCCAGTCAATCGCAGGCCACTCT...GGAAGAGAAGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAACTCCTGATATGTTTGTCTAGAGGTAGGGCTGCGACGGCAGCAAGGGTTTGCTATGGCATAAGGTaGCGATGTCTGTGGGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: QKLLICLSRGRAATAARVCYGIR*RCLWGT Trigger: CGTTCCCCACAGACATCGTCACCTTATGCCATAGCA...AACCCTTGCTGCCGTCGCAGCCCTACCTCTAGACAAACATATCAGGAGTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGATGCTGCCAGCAGTTTATACTGCAGGAAAGTAACATTGCTTCCGGCTTGGCCTGCGATTGACTaGGGAACCTCTGCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RADAASSLYCRKVTLLPAWPAID*GTSASA Trigger: AGCTGAAGCAGAGGTTCCCCAGTCAATCGCAGGCCA...AGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCATCTGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CCA 90 bp | GGACCTGCCACCCTTGTGACCCTTGGGAGGAAGGCAACAGACCAAGTTTCTCACATAGATGACCAGGCCTaGTCCAAACCTATTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPATLVTLGRKATDQVSHIDDQA*SKPIPV Trigger: TACTGGAATAGGTTTGGACCAGGCCTGGTCATCTAT...GTGAGAAACTTGGTCTGTTGCCTTCCTCCCAAGGGTCACAAGGGTGGCAGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTACTCTCTCAGGAGAGCTGAAAATCCTGTCTTGGACCTGCCACCCTACTCCATCTGGAATCTaGGAAGGGTCCCGCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: ISCTLSGELKILSWTCHPTPSGI*EGSRSI Trigger: TATGCTGCGGGACCCTTCTCAGATTCCAGATGGAGT...AGGGTGGCAGGTCCAAGACAGGATTTTCAGCTCTCCTGAGAGAGTACAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCAGATGCTGCCAGCAGTTTATACTGCAGGAAAGTAACATTGCTTCCGGCTATCCATACCAATAGATaGCCAGGCCTGGTCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RADAASSLYCRKVTLLPAIHTNR*PGLVQT Trigger: GGTTTGGACCAGGCCTGGTCATCTATTGGTATGGAT...AGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCATCTGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAGCAGTTTATACTGCAGGAAAGTAACATTGCTTCCGGCTTCTCTTCCAACAGACTTGGAGGGTaGAGTCTGTTCATGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCQQFILQESNIASGFSSNRLGG*SLFMPL Trigger: CAGGGGCATGAACAGACTCCACCCTCCAAGTCTGTT...GGAAGAGAAGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATACTTTCTCTTCTGTTCAGTATACAAGGAGAAAGCATTCGGAAGGAAGCAGCTTCCTCAGGCTCTaGCTAGTGGGCGGTACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHTFSSVQYTRRKHSEGSSFLRL*LVGGTD Trigger: GTCTGTACCGCCCACTAGGCAGAGCCTGAGGAAGCT...GCTTCCTTCCGAATGCTTTCTCCTTGTATACTGAACAGAAGAGAAAGTATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR GCA 90 bp | GACAGAAATGCTGATAATGAGTGGGTTGTGTCTGCAGTTCTTGGCTATTCACATAGCTTCCTCAGGCTCTaGCTAGTGGGCGGTACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DRNADNEWVVSAVLGYSHSFLRL*LVGGTD Trigger: GTCTGTACCGCCCACTAGGCAGAGCCTGAGGAAGCT...ATGTGAATAGCCAAGAACTGCAGACACAACCCACTCATTATCAGCATTTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGATGCTGCCAGCAGTTTATACTGCAGGAAAGTAACATTGCTTCCGGCTTGTTTCTGGTACTCCTaGGAGAAGATGCTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RADAASSLYCRKVTLLPACFWYS*EKMLSR Trigger: TCTGCTGAGCATCTTCTCCCAGGAGTACCAGAAACA...AGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCATCTGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAACTCCTGATATGTTTGTCTAGAGGTAGGGCTGCGACGGCAGCAAGGGTTACTTTCAATCGCTTCTaGAGTGTGATGTTTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QKLLICLSRGRAATAARVTFNRF*SVMFGM Trigger: CATGCCAAACATCACACTCCAGAAGCGATTGAAAGT...AACCCTTGCTGCCGTCGCAGCCCTACCTCTAGACAAACATATCAGGAGTTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | AACTCACATCTTGCAGTCTCCATACTTTCTCTTCTGTTCAGTATACAAGGAGAAAGAGTGGCCTGCGATTaGCTGGGGAACCTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSHLAVSILSLLFSIQGERVACD*LGNLCF Trigger: GAAGCAGAGGTTCCCCAGTCAATCGCAGGCCACTCT...TTCTCCTTGTATACTGAACAGAAGAGAAAGTATGGAGACTGCAAGATGTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTACTCTCTCAGGAGAGCTGAAAATCCTGTCTTGGACCTGCCACCCTTTGCTTTCAATCCAGTaGATTATGTGCCCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ISCTLSGELKILSWTCHPLLSIQ*IMCPST Trigger: TGTGGAAGGGCACATAATTCACTGGATTGAAAGCAA...AGGGTGGCAGGTCCAAGACAGGATTTTCAGCTCTCCTGAGAGAGTACAGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAACTCCTGATATGTTTGTCTAGAGGTAGGGCTGCGACGGCAGCAAGGGTTACATTCATCACCAAATaGGGCTTTGCTTTCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKLLICLSRGRAATAARVTFITK*GFAFNP Trigger: TGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGT...AACCCTTGCTGCCGTCGCAGCCCTACCTCTAGACAAACATATCAGGAGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAAATGCTGATAATGAGTGGGTTGTGTCTGCAGTTCTTGGCTATTCACATTGCTATGGCATAAGGTaGCGATGTCTGTGGGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: DRNADNEWVVSAVLGYSHCYGIR*RCLWGT Trigger: CGTTCCCCACAGACATCGTCACCTTATGCCATAGCA...ATGTGAATAGCCAAGAACTGCAGACACAACCCACTCATTATCAGCATTTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATACTTTCTCTTCTGTTCAGTATACAAGGAGAAAGCATTCGGAAGGAAGCACAGACACTAGGCACTaGGCTATCTCCTCGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHTFSSVQYTRRKHSEGSTDTRH*AISSYW Trigger: CCAGTACGAGGAGATAGCCCAGTGCCTAGTGTCTGT...GCTTCCTTCCGAATGCTTTCTCCTTGTATACTGAACAGAAGAGAAAGTATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | AACTCACATCTTGCAGTCTCCATACTTTCTCTTCTGTTCAGTATACAAGGAGAACCCTTTGCACGGAGCTaGTCCTCATCTAGGAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: NSHLAVSILSLLFSIQGEPFARS*SSSRND Trigger: GTCGTTCCTAGATGAGGATCAGCTCCGTGCAAAGGG...TTCTCCTTGTATACTGAACAGAAGAGAAAGTATGGAGACTGCAAGATGTGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAGCAGTTTATACTGCAGGAAAGTAACATTGCTTCCGGCTTCTCTTCCAACAGTCATTCACGATaGACTGATAGACCTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCQQFILQESNIASGFSSNSHSR*TDRPGL Trigger: CAAACCAGGTCTATCAGTGCATCGTGAATGACTGTT...GGAAGAGAAGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCAGCAGTTTATACTGCAGGAAAGTAACATTGCTTCCGGCTTCTCTTCCACATTCATCACCAAATaGGGCTTTGCTTTCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CCQQFILQESNIASGFSSTFITK*GFAFNP Trigger: TGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGT...GGAAGAGAAGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAAATGCTGATAATGAGTGGGTTGTGTCTGCAGTTCTTGGCTATTCACATTGTTTCTGGTACTCCTaGGAGAAGATGCTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRNADNEWVVSAVLGYSHCFWYS*EKMLSR Trigger: TCTGCTGAGCATCTTCTCCCAGGAGTACCAGAAACA...ATGTGAATAGCCAAGAACTGCAGACACAACCCACTCATTATCAGCATTTCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| 3UTR CAA 72 bp | TGTTTGTCAGAGACAGAAATGCTGATAATGAGTGGGTaGTGTCTGCAGTTCTTGGCTATTCACATCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLSETEMLIMSG*CLQFLAIHITQ Trigger: CTGGGTGATGTGAATAGCCAAGAACTGCAGACACAACCCACTCATTATCAGCATTTCTGTCTCTGACAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAGCAGTTTATACTGCAGGAAAGTAACATTGCTTCCGGCTTCTCTTCCCTTTTAATATGTTTCTaGTACTCCTGGGAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CCQQFILQESNIASGFSSLLICF*YSWEKM Trigger: CATCTTCTCCCAGGAGTACCAGAAACATATTAAAAG...GGAAGAGAAGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAAATGCTGATAATGAGTGGGTTGTGTCTGCAGTTCTTGGCTATTCACATATAGATGACCAGGCCTaGTCCAAACCTATTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DRNADNEWVVSAVLGYSHIDDQA*SKPIPV Trigger: TACTGGAATAGGTTTGGACCAGGCCTGGTCATCTAT...ATGTGAATAGCCAAGAACTGCAGACACAACCCACTCATTATCAGCATTTCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR TCA 90 bp | AACTCACATCTTGCAGTCTCCATACTTTCTCTTCTGTTCAGTATACAAGGAGAATTGCTTTCAATCCAGTaGATTATGTGCCCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NSHLAVSILSLLFSIQGELLSIQ*IMCPST Trigger: TGTGGAAGGGCACATAATTCACTGGATTGAAAGCAA...TTCTCCTTGTATACTGAACAGAAGAGAAAGTATGGAGACTGCAAGATGTGAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGATGCCTCTTTCCCGGTaGCAGTCCAGTTCCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RRPPGSTERLRAASAEPQMPLSR*QSSSWI Trigger: TATCCAGGAACTGGACTGCAACCGGGAAAGAGGCAT...CTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTAGAGGGCCACTGCAGACCAGAGGCCGGGGTGCAGTCCTCTGCTGCAGCCATGCCTCTTTCCCGGTaGCAGTCCAGTTCCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ALEGHCRPEAGVQSSAAAMPLSR*QSSSWI Trigger: TATCCAGGAACTGGACTGCAACCGGGAAAGAGGCAT...GGCTGCAGCAGAGGACTGCACCCCGGCCTCTGGTCTGCAGTGGCCCTCTAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCACCAGGCTCCACAGAAAGACTCCGGGCGGCCTCTGCTGAGCCCCAGGTGACTGATAGACCTGGTTaGCTAGAACTCCATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPPGSTERLRAASAEPQVTDRPG*LELHLE Trigger: TTCCAGATGGAGTTCTAGCAAACCAGGTCTATCAGT...CACCTGGGGCTCAGCAGAGGCCGCCCGGAGTCTTTCTGTGGAGCCTGGTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTAGAGGGCCACTGCAGACCAGAGGCCGGGGTGCAGTCCTCTGCTGCAGCCACTGATAGACCTGGTTaGCTAGAACTCCATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALEGHCRPEAGVQSSAAATDRPG*LELHLE Trigger: TTCCAGATGGAGTTCTAGCAAACCAGGTCTATCAGT...GGCTGCAGCAGAGGACTGCACCCCGGCCTCTGGTCTGCAGTGGCCCTCTAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAACTCCTGATATGTTTGTCTAGAGGTAGGGCTGCGACGGCAGCAAGGGTTCCAGTAGCTCCAGAATaGGCCATGCAGGTAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QKLLICLSRGRAATAARVPVAPE*AMQVGV Trigger: CACGCCTACCTGCATGGCCAATTCTGGAGCTACTGG...AACCCTTGCTGCCGTCGCAGCCCTACCTCTAGACAAACATATCAGGAGTTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGATGCTGCCAGCAGTTTATACTGCAGGAAAGTAACATTGCTTCCGGCTCAGAGTGGCCTGCGATaGACTGGGGAACCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RADAASSLYCRKVTLLPAQSGLR*TGEPLL Trigger: AAGCAGAGGTTCCCCAGTCAATCGCAGGCCACTCTG...AGCCGGAAGCAATGTTACTTTCCTGCAGTATAAACTGCTGGCAGCATCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CAA 90 bp | TCATCTCAAGTTCAGGGCAGATGCTGCCAGCAGTTTATACTGCAGGAAAGTAACGTGGGGAACGAGGCTTaGAGCAGGATGCCTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSQVQGRCCQQFILQESNVGNEA*SRMPLS Trigger: GGAAAGAGGCATCCTGCTCAAAGCCTCGTTCCCCAC...GTTACTTTCCTGCAGTATAAACTGCTGGCAGCATCTGCCCTGAACTTGAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS TCA 90 bp | GAATTGGCCATGCAGGTAGGCGTGGTGGCTACATTCATCACCAAATaGGGCTTTGCTTTCAATCCAGTGAATTATGTGCCCTTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELAMQVGVVATFITK*GFAFNPVNYVPFHS Trigger: GCTGTGGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCTACCTGCATGGCCAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS GCA 90 bp | CATGCAGGTAGGCGTGGTGGCTACATTCATCACCAAATGAGGCTTTaGTTTCAATCCAGTGAATTATGTGCCCTTCCACAGCAACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HAGRRGGYIHHQMRL*FQSSELCALPQQLA Trigger: TGCCAGTTGCTGTGGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCTACCTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110918.3 |
||
| CDS GCA 90 bp | CATGCAGGTAGGCGTGGTGGCTACATTCATCACCAAATGAGGCTTTaGTTTCAATCCAGTGAATTATGTGCCCTTCCACAGCTAAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HAGRRGGYIHHQMRL*FQSSELCALPQLRD Trigger: GTCCCTTAGCTGTGGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCTACCTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166472.8 |
||
| CDS-3UTR CAA 90 bp | CTCCATACTTTCTCTTCTGTTCAGTATACAAGGAGAAAGCATTCGGAAGGAAGCCAGAGTGGCCTGCGATaGACTGGGGAACCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHTFSSVQYTRRKHSEGSQSGLR*TGEPLL Trigger: AAGCAGAGGTTCCCCAGTCAATCGCAGGCCACTCTG...GCTTCCTTCCGAATGCTTTCTCCTTGTATACTGAACAGAAGAGAAAGTATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS-3UTR CAA 90 bp | CTCCATACTTTCTCTTCTGTTCAGTATACAAGGAGAAAGCATTCGGAAGGAAGCGTGGGGAACGAGGCTTaGAGCAGGATGCCTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHTFSSVQYTRRKHSEGSVGNEA*SRMPLS Trigger: GGAAAGAGGCATCCTGCTCAAAGCCTCGTTCCCCAC...GCTTCCTTCCGAATGCTTTCTCCTTGTATACTGAACAGAAGAGAAAGTATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS TCA 90 bp | TGGTGGCTACATTCATCACCAAATGAGGCTTTGCTTTCAATCCAGTaGATTATGTGCCCTTCCACAGCAACTGGCACCTGTAAAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WWLHSSPNEALLSIQ*IMCPSTATGTCKMK Trigger: CTTCATTTTACAGGTGCCAGTTGCTGTGGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGTAGCCACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110918.3 |
||
| CDS TCA 90 bp | TGGTGGCTACATTCATCACCAAATGAGGCTTTGCTTTCAATCCAGTaGATTATGTGCCCTTCCACAGCTAAGGGACAAAGCATTACAACT | + |
|
Preference number: 5 (lower is better) Translates to: WWLHSSPNEALLSIQ*IMCPSTAKGQSITT Trigger: AGTTGTAATGCTTTGTCCCTTAGCTGTGGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGTAGCCACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166472.8 |
||
| CDS CCA 90 bp | CCCCACGCCATTCAGGTACCTCTGGTAGTAACTTTCAATCGCTTCTaGAGTGTGATGTTTGGCATGTGTTCTTTTAATATGTTTCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PHAIQVPLVVTFNRF*SVMFGMCSFNMFLV Trigger: TACCAGAAACATATTAAAAGAACACATGCCAAACATCACACTCCAGAAGCGATTGAAAGTTACTACCAGAGGTACCTGAATGGCGTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS CCA 72 bp | TCCGAGCCATTAATGAGGGTGCATAGTCCACCTCATTaGCCAGCTCCAAGAGCACGGGGGCTGCTCCGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SEPLMRVHSPPH*PAPRARGLLRF Trigger: AAAACGGAGCAGCCCCCGTGCTCTTGGAGCTGGCCAATGAGGTGGACTATGCACCCTCATTAATGGCTCGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS CCA 72 bp | GTTTCTGGTACTCCTGGGAGAAGATGCTCAGCAGAGTaGCCTGCGATTGACTGGGGAACCTCTGCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSGTPGRRCSAE*PAIDWGTSASA Trigger: AGCTGAAGCAGAGGTTCCCCAGTCAATCGCAGGCCACTCTGCTGAGCATCTTCTCCCAGGAGTACCAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS CAA 72 bp | TGGCATAAGGTGACGATGTCTGTGGGGAACGAGGCTTaGAGCAGGATGCCTCTTTCCCGGTTGCAGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WHKVTMSVGNEA*SRMPLSRLQSS Trigger: ACTGGACTGCAACCGGGAAAGAGGCATCCTGCTCAAAGCCTCGTTCCCCACAGACATCGTCACCTTATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
||
| CDS CAA 90 bp | GCTGTGCTATGGCATAAGGTGACGATGTCTGTGGGGAACGAGGCTTaGAGCAGGATGCCTCTTTCCCGGTTGCAGTCCAGTTCCTGGATA | + |
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Preference number: 6 (lower is better) Translates to: AVLWHKVTMSVGNEA*SRMPLSRLQSSSWI Trigger: TATCCAGGAACTGGACTGCAACCGGGAAAGAGGCATCCTGCTCAAAGCCTCGTTCCCCACAGACATCGTCACCTTATGCCATAGCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS CAA 72 bp | CAGGCCTGGTCCAAACCTATTCCAGTAGCTCCAGAATaGGCCATGCAGGTAGGCGTGGTGGCTACATTCATC | + |
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Preference number: 6 (lower is better) Translates to: QAWSKPIPVAPE*AMQVGVVATFI Trigger: GATGAATGTAGCCACCACGCCTACCTGCATGGCCAATTCTGGAGCTACTGGAATAGGTTTGGACCAGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS CAA 90 bp | GCGGTCCATAGCAACAGTCATTCACGATGCACTGATAGACCTGGTTaGCTAGAACTCCATCTGGAATCTGAGAAGGGTCCCGCAGCATAC | + |
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Preference number: 6 (lower is better) Translates to: AVHSNSHSRCTDRPG*LELHLESEKGPAAY Trigger: GTATGCTGCGGGACCCTTCTCAGATTCCAGATGGAGTTCTAGCAAACCAGGTCTATCAGTGCATCGTGAATGACTGTTGCTATGGACCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS GCA 72 bp | AGTCCACCAGCGGTCCATAGCAACAGTCATTCACGATaGACTGATAGACCTGGTTTGCTAGAACTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: SPPAVHSNSHSR*TDRPGLLELHL Trigger: CAGATGGAGTTCTAGCAAACCAGGTCTATCAGTGCATCGTGAATGACTGTTGCTATGGACCGCTGGTGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS GCA 72 bp | CTGTTTATAACAGACTTGGAGGGTGGAGTCTGTTCATaGCCCTGTAGAAATCTCTCCAGGATAATCCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LFITDLEGGVCS*PCRNLSRIIRA Trigger: GGCTCGGATTATCCTGGAGAGATTTCTACAGGGGCATGAACAGACTCCACCCTCCAAGTCTGTTATAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS CAA 72 bp | AGCAACAGTCATTCACGATGCACTGATAGACCTGGTTaGCTAGAACTCCATCTGGAATCTGAGAAGGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SNSHSRCTDRPG*LELHLESEKGP Trigger: GGGACCCTTCTCAGATTCCAGATGGAGTTCTAGCAAACCAGGTCTATCAGTGCATCGTGAATGACTGTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS TCA 72 bp | ATGCAGGTAGGCGTGGTGGCTACATTCATCACCAAATaGGGCTTTGCTTTCAATCCAGTGAATTATGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: MQVGVVATFITK*GFAFNPVNYVP Trigger: GGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCTACCTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS GCA 72 bp | AGGCGTGGTGGCTACATTCATCACCAAATGAGGCTTTaGTTTCAATCCAGTGAATTATGTGCCCTTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: RRGGYIHHQMRL*FQSSELCALPQ Trigger: CTGTGGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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| CDS TCA 72 bp | CATTCATCACCAAATGAGGCTTTGCTTTCAATCCAGTaGATTATGTGCCCTTCCACAGCAACTGGCACCTGT | + |
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Preference number: 6 (lower is better) Translates to: HSSPNEALLSIQ*IMCPSTATGTC Trigger: ACAGGTGCCAGTTGCTGTGGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110918.3 |
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| CDS TCA 72 bp | CATTCATCACCAAATGAGGCTTTGCTTTCAATCCAGTaGATTATGTGCCCTTCCACAGCTAAGGGACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: HSSPNEALLSIQ*IMCPSTAKGQS Trigger: GCTTTGTCCCTTAGCTGTGGAAGGGCACATAATTCACTGGATTGAAAGCAAAGCCTCATTTGGTGATGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166472.8 |
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| CDS CCA 72 bp | ATTCAGGTACCTCTGGTAGTAACTTTCAATCGCTTCTaGAGTGTGATGTTTGGCATGTGTTCTTTTAATATG | + |
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Preference number: 6 (lower is better) Translates to: IQVPLVVTFNRF*SVMFGMCSFNM Trigger: CATATTAAAAGAACACATGCCAAACATCACACTCCAGAAGCGATTGAAAGTTACTACCAGAGGTACCTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110918.3 ENSMUST00000166472.8 |
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