Pregenerated sensors for CDHR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032595Ensembl transcript IDs: ENSMUST00000175759.8, ENSMUST00000175802.8, ENSMUST00000176306.8, ENSMUST00000176334.8, ENSMUST00000176373.3, ENSMUST00000177173.8, ENSMUST00000177508.8
Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCCCTGTGTCCTCCTGAACCCGGAATGTGCGTGGGACACAGGCTaGGGAGAACTCGTTGACGGGTGTCACCATCACCAGCACTGGAAT | + |
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Preference number: 1 (lower is better) Translates to: GPCVLLNPECAWDTG*GELVDGCHHHQHWN Trigger: ATTCCAGTGCTGGTGATGGTGACACCCGTCAACGAGTTCTCCCCAGCCTGTGTCCCACGCACATTCCGGGTTCAGGAGGACACAGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR GCA 90 bp | CCGGAGGATCCTGCTGAGGAGCCAACCCAGAGCCAGAAGGAGAACTaGACCAGTTGCTGTCAGCACTACCACAAACCAGGGCTCTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: PEDPAEEPTQSQKEN*TSCCQHYHKPGLWL Trigger: AAGCCAGAGCCCTGGTTTGTGGTAGTGCTGACAGCAACTGGTGCAGTTCTCCTTCTGGCTCTGGGTTGGCTCCTCAGCAGGATCCTCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR TCA 90 bp | CCTGAACCCGGAATGTGCGTGGGACACAGGCTGGGGAGAACTCGTTaGCGGGTGTCACCATCACCAGCACTGGAATCTCAGTGGTCATTT | + |
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Preference number: 1 (lower is better) Translates to: PEPGMCVGHRLGRTR*RVSPSPALESQWSF Trigger: AAATGACCACTGAGATTCCAGTGCTGGTGATGGTGACACCCGTCAACGAGTTCTCCCCAGCCTGTGTCCCACGCACATTCCGGGTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR TCA 90 bp | AGTGGTCATTTGGGGTTGACCACCATCGACCACCAAGATGGAAGCTaGATGCTGGAAGCAAGCCCCAGGTGTGTCACAGTCCAACGTAGC | + |
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Preference number: 1 (lower is better) Translates to: SGHLGLTTIDHQDGS*MLEASPRCVTVQRS Trigger: GCTACGTTGGACTGTGACACACCTGGGGCTTGCTTCCAGCATTCAGCTTCCATCTTGGTGGTCGATGGTGGTCAACCCCAAATGACCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR CCA 90 bp | GAATCTCAGTGGTCATTTGGGGTTGACCACCATCGACCACCAAGATaGAAGCTGAATGCTGGAAGCAAGCCCCAGGTGTGTCACAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: ESQWSFGVDHHRPPR*KLNAGSKPQVCHSP Trigger: TGGACTGTGACACACCTGGGGCTTGCTTCCAGCATTCAGCTTCCATCTTGGTGGTCGATGGTGGTCAACCCCAAATGACCACTGAGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACACAGGCTGGGGAGAACTCGTTGACGGGTGTCACCATCACCAGCACTGGACACCAAGATGGAAGCTaGATGCTGGAAGCAAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: GTQAGENSLTGVTITSTGHQDGS*MLEASP Trigger: GGGGCTTGCTTCCAGCATTCAGCTTCCATCTTGGTG...TCCAGTGCTGGTGATGGTGACACCCGTCAACGAGTTCTCCCCAGCCTGTGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGCTGTCAGCACTACCACAAACCAGGGCTCTGGCTTCCAGAAAGCCTCTAATGGTAGTCCATATCCGTaGCCACTATGGAGCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VAVSTTTNQGSGFQKASNGSPYP*PLWSPA Trigger: TGCTGGGCTCCATAGTGGGCACGGATATGGACTACC...ATTAGAGGCTTTCTGGAAGCCAGAGCCCTGGTTTGTGGTAGTGCTGACAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR-3UTR CCA 90 bp | CCGGAGGATCCTGCTGAGGAGCCAACCCAGAGCCAGAAGGAGAACTGCACCAGTACACCTCAACCTCAATaGTTATGGTACATGAACCTG | + |
|
Preference number: 2 (lower is better) Translates to: PEDPAEEPTQSQKENCTSTPQPQ*LWYMNL Trigger: CAGGTTCATGTACCATAACCATTGAGGTTGAGGTGT...ACTGGTGCAGTTCTCCTTCTGGCTCTGGGTTGGCTCCTCAGCAGGATCCTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCACCATCACCAGCACTGGAATCTCAGTGGTCATTTGGGGTTGACCACCATCATGGAAGCTGAATGCTaGAAGCAAGCCCCAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: CHHHQHWNLSGHLGLTTIMEAEC*KQAPGV Trigger: CACACCTGGGGCTTGCTTCCAGCATTCAGCTTCCAT...GATGGTGGTCAACCCCAAATGACCACTGAGATTCCAGTGCTGGTGATGGTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTCGTTGACGGGTGTCACCATCACCAGCACTGGAATCTCAGTGGTCATTTGAAGATGGAAGCTGAATaGTGGAAGCAAGCCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: ELVDGCHHHQHWNLSGHLKMEAE*WKQAPG Trigger: ACCTGGGGCTTGCTTCCAGCATTCAGCTTCCATCTT...CAAATGACCACTGAGATTCCAGTGCTGGTGATGGTGACACCCGTCAACGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGCCTCTAATTCTGTCACAATCAGGGGTGTCATTGTTGAGGACACCTCAAACCCGGAATGTGCGTaGGACACAGGCTGGGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QKASNSVTIRGVIVEDTSNPECA*DTGWGE Trigger: TTCTCCCCAGCCTGTGTCCCACGCACATTCCGGGTT...TGAGGTGTCCTCAACAATGACACCCCTGATTGTGACAGAATTAGAGGCTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCAGAAAGCCTCTAATTCTGTCACAATCAGGGGTGTCATTGTTGAGGACACACCATCACCAGCACTaGAATCTCAGTGGTCATTTG | + |
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Preference number: 2 (lower is better) Translates to: ASRKPLILSQSGVSLLRTHHHQH*NLSGHL Trigger: CAAATGACCACTGAGATTCCAGTGCTGGTGATGGTG...TGTCCTCAACAATGACACCCCTGATTGTGACAGAATTAGAGGCTTTCTGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR CCA 72 bp | GTGGGGCCCTGTGTCCTCCTGAACCCGGAATGTGCGTaGGACACAGGCTGGGGAGAACTCGTTGACGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: VGPCVLLNPECA*DTGWGELVDGC Trigger: ACACCCGTCAACGAGTTCTCCCCAGCCTGTGTCCCACGCACATTCCGGGTTCAGGAGGACACAGGGCCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR CCA 72 bp | GTCCTCCTGAACCCGGAATGTGCGTGGGACACAGGCTaGGGAGAACTCGTTGACGGGTGTCACCATCACCAG | + |
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Preference number: 3 (lower is better) Translates to: VLLNPECAWDTG*GELVDGCHHHQ Trigger: CTGGTGATGGTGACACCCGTCAACGAGTTCTCCCCAGCCTGTGTCCCACGCACATTCCGGGTTCAGGAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGCTGTCAGCACTACCACAAACCAGGGCTCTGGCTTCCAGAAAGCCTCTAATGCTGGGGAGAACTCGTaGACGGGTGTCACCATCACC | + |
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Preference number: 3 (lower is better) Translates to: VAVSTTTNQGSGFQKASNAGENS*TGVTIT Trigger: GGTGATGGTGACACCCGTCAACGAGTTCTCCCCAGC...ATTAGAGGCTTTCTGGAAGCCAGAGCCCTGGTTTGTGGTAGTGCTGACAGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR CCA 72 bp | TGGTCATTTGGGGTTGACCACCATCGACCACCAAGATaGAAGCTGAATGCTGGAAGCAAGCCCCAGGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: WSFGVDHHRPPR*KLNAGSKPQVC Trigger: ACACACCTGGGGCTTGCTTCCAGCATTCAGCTTCCATCTTGGTGGTCGATGGTGGTCAACCCCAAATGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR-3UTR CAA 90 bp | AACTGCACCAGTTGCTGTCAGCACTACCACAAACCAGGGCTCTGGCTTCCAGAAAGCAGAATGGTGATCTaGTACAACCTCTGCTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: NCTSCCQHYHKPGLWLPESRMVI*YNLCCS Trigger: TGAGCAGCAGAGGTTGTACAAGATCACCATTCTGCT...TTCTGGAAGCCAGAGCCCTGGTTTGTGGTAGTGCTGACAGCAACTGGTGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR TCA 72 bp | ATCACCAGCACTGGAATCTCAGTGGTCATTTGGGGTTaGCCACCATCGACCACCAAGATGGAAGCTGAATGC | + |
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Preference number: 3 (lower is better) Translates to: ITSTGISVVIWG*PPSTTKMEAEC Trigger: GCATTCAGCTTCCATCTTGGTGGTCGATGGTGGTCAACCCCAAATGACCACTGAGATTCCAGTGCTGGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR TCA 72 bp | GGTCCCAGTCTTGACTGTGATCAATCAGCAGAATGGTaGTCTTGTACAACCTCTGCTGCTCATAGTCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GPSLDCDQSAEW*SCTTSAAHSPK Trigger: CTTTGGACTATGAGCAGCAGAGGTTGTACAAGATCACCATTCTGCTGATTGATCACAGTCAAGACTGGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR TCA 72 bp | CAATGGTTATGGTACATGAACCTGATCGGTGACTGTTaGGGTCCCAGTCTTGACTGTGATCAATCAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: QWLWYMNLIGDC*GPSLDCDQSAE Trigger: TTCTGCTGATTGATCACAGTCAAGACTGGGACCTCAACAGTCACCGATCAGGTTCATGTACCATAACCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| 3UTR TCA 72 bp | GTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATaGTCATGGGAAAAGGGAACTCCCCACAGAGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: VFITKLVWKSRL*SWEKGTPHRVK Trigger: CTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | ATAGTCCAAAGGCCCCAGGAGGTGAAGTTCTCCACTCAGACGATCCACAGCAAACGCTGGATGGCAGCGTaGGGGCCACTGGTTTACCGC | + |
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Preference number: 4 (lower is better) Translates to: IVQRPQEVKFSTQTIHSKRWMAA*GPLVYR Trigger: GCGGTAAACCAGTGGCCCCCACGCTGCCATCCAGCG...TTTGCTGTGGATCGTCTGAGTGGAGAACTTCACCTCCTGGGGCCTTTGGACTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| CDS-3UTR CCA 90 bp | TTCCAGAAAGCCTCTAATTCTGTCACAATCAGGGGTGTCATTGTTGAGGACACCACCAGTAGCGCTGGATaGCAGCGTGGGGGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: FQKASNSVTIRGVIVEDTTSSAG*QRGGHW Trigger: CCAGTGGCCCCCACGCTGCCATCCAGCGCTACTGGT...GGTGTCCTCAACAATGACACCCCTGATTGTGACAGAATTAGAGGCTTTCTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| CDS-3UTR CCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCAGGTGCAGGGCTGCTCTaGCCATGGAGGCCCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAGAGLL*PWRPQH Trigger: GTGTTGGGGCCTCCATGGCCAGAGCAGCCCTGCACC...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
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| CDS-3UTR CCA 90 bp | CTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACACGCTGGATGGCAGCGTaGGGGCCACTGGTTTACCGC | + |
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Preference number: 4 (lower is better) Translates to: LNWFGNPGYDHGKRELPTRWMAA*GPLVYR Trigger: GCGGTAAACCAGTGGCCCCCACGCTGCCATCCAGCG...TGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS-3UTR CCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTTTGGTGGGTGCTGGTaGCCACCGTGCTGGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTEFGGCW*PPCWPS Trigger: GGAAGGCCAGCACGGTGGCCACCAGCACCCACCAAA...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTGCTTTGGTGGGTGCTaGTGGCCACCGTGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTECFGGC*WPPCWP Trigger: AGGCCAGCACGGTGGCCACCAGCACCCACCAAAGCA...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAATGCTTTGGTGGGTGCTaGTGGCCACCGTGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKCFGGC*WPPCWP Trigger: AGGCCAGCACGGTGGCCACCAGCACCCACCAAAGCA...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCAGCGTGGGACACAGGCTaGGGAGAACTCGTTGACGGG | + |
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Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAAWDTG*GELVDG Trigger: CCCGTCAACGAGTTCTCCCCAGCCTGTGTCCCACGC...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175802.8 ENSMUST00000177173.8 |
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| 3UTR CAA 72 bp | TGTCACCATCACCAGCACTGGAATCTCAGTGGTCATTaGGGGTTGACCACCATCGACCACCAAGATGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: CHHHQHWNLSGH*GLTTIDHQDGS Trigger: GCTTCCATCTTGGTGGTCGATGGTGGTCAACCCCAAATGACCACTGAGATTCCAGTGCTGGTGATGGTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
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| CDS-3UTR CCA 90 bp | CTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACATGCTTTGGTGGGTGCTaGTGGCCACCGTGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LNWFGNPGYDHGKRELPTCFGGC*WPPCWP Trigger: AGGCCAGCACGGTGGCCACCAGCACCCACCAAAGCA...TGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | ATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTGACACTGTGCTTTGGTaGGTGCTGGTGGCCACCGTG | + |
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Preference number: 4 (lower is better) Translates to: IGLEIQAMIMGKGNSPQSDTVLW*VLVATV Trigger: CACGGTGGCCACCAGCACCCACCAAAGCACAGTGTC...ACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGGACACTGTGCTTTGGTaGGTGCTGGTGGCCACCGTG | + |
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Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTEDTVLW*VLVATV Trigger: CACGGTGGCCACCAGCACCCACCAAAGCACAGTGTC...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCACACGAAGACGGAGGCTaGCAGAGTCAGGAGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAHEDGG*QSQEGC Trigger: ACAGCCCTCCTGACTCTGCCAGCCTCCGTCTTCGTG...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
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| CDS-3UTR CCA 90 bp | ATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTCACGAAGACGGAGGCTaGCAGAGTCAGGAGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: IGLEIQAMIMGKGNSPQSHEDGG*QSQEGC Trigger: ACAGCCCTCCTGACTCTGCCAGCCTCCGTCTTCGTG...ACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
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| CDS-3UTR CCA 90 bp | CTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGCGTGGGACACAGGCTaGGGAGAACTCGTTGACGGG | + |
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Preference number: 4 (lower is better) Translates to: LNWFGNPGYDHGKRELPTAWDTG*GELVDG Trigger: CCCGTCAACGAGTTCTCCCCAGCCTGTGTCCCACGC...TGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175802.8 ENSMUST00000177173.8 |
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| CDS-3UTR GCA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAATGCTGGTGGCCACCGTaGTGGCCTTCCAAGGAACTA | + |
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Preference number: 4 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKCWWPP*WPSKEL Trigger: TAGTTCCTTGGAAGGCCAGCACGGTGGCCACCAGCA...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGAACCCGGAATGTGCGTaGGACACAGGCTGGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTENPECA*DTGWGE Trigger: TTCTCCCCAGCCTGTGTCCCACGCACATTCCGGGTT...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175802.8 ENSMUST00000177173.8 |
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| CDS-3UTR CCA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAATATCCGTGCCCACTATaGAGCCCAGCAGAGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKYPCPL*SPAECG Trigger: CCCACACTCTGCTGGGCTCCATAGTGGGCACGGATA...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175802.8 ENSMUST00000177173.8 |
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| CDS-3UTR TCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCACACCAAGATGGAAGCTaGATGCTGGAAGCAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAHQDGS*MLEASP Trigger: GGGGCTTGCTTCCAGCATTCAGCTTCCATCTTGGTG...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
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| CDS-3UTR TCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGGTGGTCATTTGGGGTTaGCCACCATCGACCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTEVVIWG*PPSTTK Trigger: CTTGGTGGTCGATGGTGGTCAACCCCAAATGACCAC...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS-3UTR TCA 90 bp | TGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGGGCCCTGTGTCCTCCTaGACCCGGAATGTGCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: CLPSLLLNWFGNPGYDHGGPVSS*TRNVRG Trigger: CCCACGCACATTCCGGGTTCAGGAGGACACAGGGCC...CCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175802.8 ENSMUST00000177173.8 |
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| CDS-3UTR GCA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGGTAGTCCATATCCGTaGCCACTATGGAGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKGSPYP*PLWSPA Trigger: TGCTGGGCTCCATAGTGGGCACGGATATGGACTACC...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175802.8 ENSMUST00000177173.8 |
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| CDS-3UTR CCA 90 bp | ATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTGTTGTAGTGCTGAGGTaGGGTATGGAAGGGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: IGLEIQAMIMGKGNSPQSVVVLR*GMEGPT Trigger: TGTGGGCCCTTCCATACCCCACCTCAGCACTACAAC...ACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | TTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCGACACTGTGCTTTGGTaGGTGCTGGTGGCCACCGTG | + |
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Preference number: 4 (lower is better) Translates to: LLNWFGNPGYDHGKRELPDTVLW*VLVATV Trigger: CACGGTGGCCACCAGCACCCACCAAAGCACAGTGTC...GGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGGAAGGAGACTTGGCTaGAGGGTGCAGGCAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKGRRLG*RVQAKP Trigger: AGGTTTTGCCTGCACCCTCCAGCCAAGTCTCCTTCC...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR TCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGCAGGGGTGTCATTGTTaGGGACACTGTGCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTEQGCHC*GHCALV Trigger: CACCAAAGCACAGTGTCCTCAACAATGACACCCCTG...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCACAGGGGTGTCATTGTTaGGGACACTGTGCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAQGCHC*GHCALV Trigger: CACCAAAGCACAGTGTCCTCAACAATGACACCCCTG...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR TCA 90 bp | CTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACACACCAAGATGGAAGCTaGATGCTGGAAGCAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LNWFGNPGYDHGKRELPTHQDGS*MLEASP Trigger: GGGGCTTGCTTCCAGCATTCAGCTTCCATCTTGGTG...TGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAGGCCCTGTGTCCTCCTaGACCCGGAATGTGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKGPVSS*TRNVRG Trigger: CCCACGCACATTCCGGGTTCAGGAGGACACAGGGCC...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175802.8 ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCATTGTTGAGGACACTGTaGTTTGGTGGGTGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKALLRTL*FGGCWW Trigger: CCACCAGCACCCACCAAAGCACAGTGTCCTCAACAA...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCACCAGTAGCGCTGGATaGCAGCGTGGGGGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELTSSAG*QRGGHW Trigger: CCAGTGGCCCCCACGCTGCCATCCAGCGCTACTGGT...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCGGTCCTTCATTTCCCTaGATGCCCCGGAGGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLNWFGNPGYDHGKRELPGPSFP*MPRRIL Trigger: CAGGATCCTCCGGGGCATCCAGGGAAATGAAGGACC...GGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000176373.3 |
||
| CDS-3UTR CCA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGGGCTGCTCTGGCCATaGAGGCCCCAACACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRGLLWP*RPQHSV Trigger: GACACTGTGTTGGGGCCTCCATGGCCAGAGCAGCCC...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGGGGCTGCTCTGGCCATaGAGGCCCCAACACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPSLLLNWFGNPGYDHGGLLWP*RPQHSV Trigger: GACACTGTGTTGGGGCCTCCATGGCCAGAGCAGCCC...CCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCAATGGAAGCTGAATGCTaGAAGCAAGCCCCAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAMEAEC*KQAPGV Trigger: CACACCTGGGGCTTGCTTCCAGCATTCAGCTTCCAT...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR TCA 90 bp | CTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACACAGGGGTGTCATTGTTaGGGACACTGTGCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNWFGNPGYDHGKRELPTQGCHC*GHCALV Trigger: CACCAAAGCACAGTGTCCTCAACAATGACACCCCTG...TGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCATCAAAGGCCCTCACTTaGAGTTTTGTGACCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKASKALT*SFVTMA Trigger: CGCCATGGTCACAAAACTGCAAGTGAGGGCCTTTGA...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCAAAGATGGAAGCTGAATaGTGGAAGCAAGCCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAKMEAE*WKQAPG Trigger: ACCTGGGGCTTGCTTCCAGCATTCAGCTTCCATCTT...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAAGGTGCAGGGCTGCTCTaGCCATGGAGGCCCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKREGAGLL*PWRPQH Trigger: GTGTTGGGGCCTCCATGGCCAGAGCAGCCCTGCACC...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCGTTGTAGTGCTGAGGTaGGGTATGGAAGGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLNWFGNPGYDHGKRELPVVVLR*GMEGPT Trigger: TGTGGGCCCTTCCATACCCCACCTCAGCACTACAAC...GGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCTTTGGTGGGTGCTGGTaGCCACCGTGCTGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELFGGCW*PPCWPS Trigger: GGAAGGCCAGCACGGTGGCCACCAGCACCCACCAAA...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTCTGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATTTTGGTGGGTGCTGGTaGCCACCGTGCTGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFCLPSLLLNWFGNPGYDFGGCW*PPCWPS Trigger: GGAAGGCCAGCACGGTGGCCACCAGCACCCACCAAA...ATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACAGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAAATGAATTCCCCAGCTaGGCTGGCAAAAGCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKNEFPS*AGKSTS Trigger: ACTGGTGCTTTTGCCAGCCCAGCTGGGGAATTCATT...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGATCCCTGTTCATCAATaGAGAAAGGCCCAGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTEIPVHQ*RKAQGK Trigger: CTTCCCCTGGGCCTTTCTCCATTGATGAACAGGGAT...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAACATCGACCACCAAGATaGAAGCTGAATGCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKHRPPR*KLNAGS Trigger: GCTTCCAGCATTCAGCTTCCATCTTGGTGGTCGATG...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGCATCGACCACCAAGATaGAAGCTGAATGCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTEHRPPR*KLNAGS Trigger: GCTTCCAGCATTCAGCTTCCATCTTGGTGGTCGATG...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGGGAGGTGAAGTTCTCTaGTCATTTGGGGTTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTEGGEVL*SFGVDH Trigger: GTGGTCAACCCCAAATGACCAGAGAACTTCACCTCC...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175759.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGCTGGAAGGTCTTTTaGGCCTGGCCTCTGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKSWKVF*AWPLRP Trigger: GGGCCTCAGAGGCCAGGCTCAAAAGACCTTCCAGCT...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR TCA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGCTGGGGAGAACTCGTTaGCGGGTGTCACCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRLGRTR*RVSPSP Trigger: TGGTGATGGTGACACCCGTCAACGAGTTCTCCCCAG...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGTGCTGGTGGCCACCGTaGTGGCCTTCCAAGGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: CLPSLLLNWFGNPGYDHGCWWPP*WPSKEL Trigger: TAGTTCCTTGGAAGGCCAGCACGGTGGCCACCAGCA...CCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCATTACCACATCTGTACTaGAGCTGCAGCTCATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKALPHLY*SCSSYW Trigger: CCAGTATGAGCTGCAGCTGCAGTACAGATGTGGTAA...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCGACTTGGCTGGAGGGTaGAGGCAAAACCTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLNWFGNPGYDHGKRELPDLAGG*RQNLHC Trigger: ACAGTGAAGGTTTTGCCTGCACCCTCCAGCCAAGTC...GGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGGGACATCTCTATTCTTaGTGCCTCCATTTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTEGHLYS*CLHLPL Trigger: GAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCC...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | ATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTGGACATCTCTATTCTTaGTGCCTCCATTTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IGLEIQAMIMGKGNSPQSGHLYS*CLHLPL Trigger: GAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCC...ACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAGAGGACACTGTGCTTTaGTGGGTGCTGGTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKEDTVL*WVLVAT Trigger: GGTGGCCACCAGCACCCACCAAAGCACAGTGTCCTC...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCGAGGACACTGTGCTTTaGTGGGTGCTGGTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELEDTVL*WVLVAT Trigger: GGTGGCCACCAGCACCCACCAAAGCACAGTGTCCTC...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | ATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTGGGTGTGATGGTCTCTaGCACATAAATGAATTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IGLEIQAMIMGKGNSPQSGCDGL*HINEFP Trigger: GGGGAATTCATTTATGTGCCAGAGACCATCACACCC...ACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCACACCATCACCAGCACTaGAATCTCAGTGGTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAHHHQH*NLSGHL Trigger: CAAATGACCACTGAGATTCCAGTGCTGGTGATGGTG...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAACTCCCTTATCCCCATaGATGCTGGGTTTATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKTPLSP*MLGLLK Trigger: CTTCAATAAACCCAGCATGCATGGGGATAAGGGAGT...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATAGCCAAATCCAGGGGTaGGGTGGTCCTCACTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FCLPSLLLNWFGNPGYDHSQIQG*GGPHYP Trigger: GGGGTAGTGAGGACCACCGCACCCCTGGATTTGGCT...ATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGCCCATACAGACATCTTaGGCTCTGCCATCAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTEPIQTS*ALPSKC Trigger: ACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGG...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCTATCCGTGCCCACTATaGAGCCCAGCAGAGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELYPCPL*SPAECG Trigger: CCCACACTCTGCTGGGCTCCATAGTGGGCACGGATA...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175802.8 ENSMUST00000177173.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTCTGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCTGGTCATTTGGGGTTaGCCACCATCGACCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VFCLPSLLLNWFGNPGYDLVIWG*PPSTTK Trigger: CTTGGTGGTCGATGGTGGTCAACCCCAAATGACCAG...ATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACAGAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175759.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCACATCTCTATTCTTGGTaGCTCCATTTGCCTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAHLYSW*LHLPLN Trigger: ATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATG...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR GCA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGCATCTCTATTCTTGGTaGCTCCATTTGCCTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NWFGNPGYDHGKRELPTEHLYSW*LHLPLN Trigger: ATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATG...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAACATCTCTATTCTTGGTaGCTCCATTTGCCTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKHLYSW*LHLPLN Trigger: ATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATG...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR GCA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGTCAATAGCTCATAGGTaGAGGGCTGCTCTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRSIAHR*RAALAM Trigger: CATGGCCAGAGCAGCCCTGCACCTATGAGCTATTGA...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGTTGTTGAGGACACTGTaGTTTGGTGGGTGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPSLLLNWFGNPGYDHGLLRTL*FGGCWW Trigger: CCACCAGCACCCACCAAAGCACAGTGTCCTCAACAA...CCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAACTTCATTTCCCTGGATaGTGTTTAGCAACTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKLHFPG*CLATEL Trigger: AAGCTCAGTTGCTAAACAGCATCCAGGGAAATGAAG...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCGGACATCTCTATTCTTaGTGCCTCCATTTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLNWFGNPGYDHGKRELPGHLYS*CLHLPL Trigger: GAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCC...GGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | CTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACACCCATACAGACATCTTaGGCTCTGCCATCAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LNWFGNPGYDHGKRELPTPIQTS*ALPSKC Trigger: ACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGG...TGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCGGCTCTCTGGACTCCTaGCAGCAACAGAGTGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELGSLDS*QQQSVH Trigger: GTGTACACTCTGTTGCTGCCAGGAGTCCAGAGAGCC...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGTGTAGGAAGGAGACTTaGCTGGAGGGTGCAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRCRKET*LEGAGK Trigger: TTTGCCTGCACCCTCCAGCCAAGTCTCCTTCCTACA...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAAAACCCGGAATGTGCGTaGGACACAGGCTGGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKRENPECA*DTGWGE Trigger: TTCTCCCCAGCCTGTGTCCCACGCACATTCCGGGTT...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175802.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | ATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTCAACCTCAATGGTTATaGTACATGAACCTGATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IGLEIQAMIMGKGNSPQSQPQWL*YMNLIG Trigger: ACCGATCAGGTTCATGTACCATAACCATTGAGGTTG...ACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCAACACCTCAACCTCAATaGTTATGGTACATGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKATPQPQ*LWYMNL Trigger: CAGGTTCATGTACCATAACCATTGAGGTTGAGGTGT...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175759.8 |
||
| 3UTR CAA 72 bp | AAGCCTCTAATTCTGTCACAATCAGGGGTGTCATTGTaGAGGACACCTCAACCTCAATGGTTATGGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: KPLILSQSGVSL*RTPQPQWLWYM Trigger: CATGTACCATAACCATTGAGGTTGAGGTGTCCTCAACAATGACACCCCTGATTGTGACAGAATTAGAGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
||
| 3UTR CAA 72 bp | AGAAAGCCTCTAATTCTGTCACAATCAGGGGTGTCATaGTTGAGGACACCTCAACCTCAATGGTTATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RKPLILSQSGVS*LRTPQPQWLWY Trigger: GTACCATAACCATTGAGGTTGAGGTGTCCTCAACAATGACACCCCTGATTGTGACAGAATTAGAGGCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
||
| CDS-3UTR TCA 90 bp | TTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCTTTTTCGAAGGACACTaGAATCTGCAGCTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLNWFGNPGYDHGKRELPFFEGH*NLQLEG Trigger: ACCTTCCAGCTGCAGATTTCAGTGTCCTTCGAAAAA...GGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR TCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCAAAGGCCCCAGGAGGTaGAGTTCTCTGGTCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELKGPRR*SSLVIW Trigger: CCAAATGACCAGAGAACTTCACCTCCTGGGGCCTTT...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175759.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAATCAATAGCTCATAGGTaGAGGGCTGCTCTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKSIAHR*RAALAM Trigger: CATGGCCAGAGCAGCCCTGCACCTATGAGCTATTGA...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | CTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACACTTCATTTCCCTGGATaGTGTTTAGCAACTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNWFGNPGYDHGKRELPTLHFPG*CLATEL Trigger: AAGCTCAGTTGCTAAACAGCATCCAGGGAAATGAAG...TGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAGATGGAAGCTGAATaGTGGAAGCAAGCCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLPSLLLNWFGNPGYDHGKMEAE*WKQAPG Trigger: ACCTGGGGCTTGCTTCCAGCATTCAGCTTCCATCTT...CCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAAGGTAGTCCATATCCGTaGCCACTATGGAGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKREGSPYP*PLWSPA Trigger: TGCTGGGCTCCATAGTGGGCACGGATATGGACTACC...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175802.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCACCATCAAAATGTTGCTaGGACATCTCTATTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAPSKCC*DISILG Trigger: ACCAAGAATAGAGATGTCCCAGCAACATTTTGATGG...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAAGTTGTAGTGCTGAGGTaGGGTATGGAAGGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKREVVVLR*GMEGPT Trigger: TGTGGGCCCTTCCATACCCCACCTCAGCACTACAAC...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCAATGTTGCAGGCTCATaGCAGTTCTGGGTACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELNVAGS*QFWVPG Trigger: CCCAGGTACCCAGAACTGCCATGAGCCTGCAACATT...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAATGTAGGAGGAACAGTTaGAGGAGAAAGGCCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKCRRNS*RRKAEG Trigger: TCCTTCGGCCTTTCTCCTTCAACTGTTCCTCCTACA...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCCATCTCTATTCTTGGTaGCTCCATTTGCCTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNWFGNPGYDHGKRELPHLYSW*LHLPLN Trigger: ATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATG...GGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR GCA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGAGACATCTTGGGCTCTaGCATCAAAATGTTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRRHLGL*HQNVAG Trigger: CCCAGCAACATTTTGATGGCAGAGCCCAAGATGTCT...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177508.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAATTGTTGAGGACACTGTaGTTTGGTGGGTGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKRELLRTL*FGGCWW Trigger: CCACCAGCACCCACCAAAGCACAGTGTCCTCAACAA...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCTGGTAATGTTTATCTaGGCTCTCTGGACTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELLVMFI*ALWTPG Trigger: GCCAGGAGTCCAGAGAGCCCAGATAAACATTACCAG...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGCCAGGGGAAGGGTTTTaGGCACTGGTAATGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: CLPSLLLNWFGNPGYDHGPGEGF*ALVMFI Trigger: GATAAACATTACCAGTGCCCAAAACCCTTCCCCTGG...CCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAAATGGAAGCTGAATGCTaGAAGCAAGCCCCAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKREMEAEC*KQAPGV Trigger: CACACCTGGGGCTTGCTTCCAGCATTCAGCTTCCAT...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCGCACTGGAATCTCAGTaGTCATTTGGGGTTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELALESQ*SFGVDH Trigger: GTGGTCAACCCCAAATGACCACTGAGATTCCAGTGC...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS-3UTR CCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAAGAGGGTCAAACGCTGTaGCTCTTGTGGGATCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKREEGQTL*LLWDPT Trigger: TGTTGGATCCCACAAGAGCCACAGCGTTTGACCCTC...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGACATCTTGGGCTCTaGCATCAAAATGTTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKRHLGL*HQNVAG Trigger: CCCAGCAACATTTTGATGGCAGAGCCCAAGATGTCT...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177508.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTCTGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCTGCCATCAAAATGTTaGAGGCTCATGGCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFCLPSLLLNWFGNPGYDLPSKC*RLMAVL Trigger: CAGAACTGCCATGAGCCTGCAACATTTTGATGGCAG...ATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACAGAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTCTGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATAGACATCTTGGGCTCTaGCATCAAAATGTTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFCLPSLLLNWFGNPGYDRHLGL*HQNVAG Trigger: GCCTGCAACATTTTGATGGCAGAGCCCAAGATGTCT...ATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACAGAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGCCCATACAGACATCTTaGGCTCTGCCATCAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CLPSLLLNWFGNPGYDHGPIQTS*ALPSKC Trigger: ACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGG...CCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGCCCATACAGACATCTTaGGCTCTGCCATCAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRPIQTS*ALPSKC Trigger: ACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGG...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAATTTATCTGGGCTCTCTaGACTCCTGGCAGCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKREFIWAL*TPGSNR Trigger: TCTGTTGCTGCCAGGAGTCCAGAGAGCCCAGATAAA...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAAAGACATCTTGGGCTCTaGCATCAAAATGTTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKRERHLGL*HQNVAG Trigger: CCCAGCAACATTTTGATGGCAGAGCCCAAGATGTCT...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177508.8 |
||
| CDS-3UTR GCA 90 bp | TTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCTTCCAAGGAACTAGATaGACAATAATGGTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLNWFGNPGYDHGKRELPFQGTR*TIMVVV Trigger: TACAACCACCATTATTGTGCATCTAGTTCCTTGGAA...GGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR GCA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGCTTCATTTCCCTGGATaGTGTTTAGCAACTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRLHFPG*CLATEL Trigger: AAGCTCAGTTGCTAAACAGCATCCAGGGAAATGAAG...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAAGGACATCTCTATTCTTaGTGCCTCCATTTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKREGHLYS*CLHLPL Trigger: GAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCC...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAACCCATACAGACATCTTaGGCTCTGCCATCAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKPIQTS*ALPSKC Trigger: ACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGG...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCATACAGACATCTTaGGCTCTGCCATCAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELPIQTS*ALPSKC Trigger: ACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGG...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGCAACCTCAATGGTTATaGTACATGAACCTGATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLPSLLLNWFGNPGYDHGQPQWL*YMNLIG Trigger: ACCGATCAGGTTCATGTACCATAACCATTGAGGTTG...CCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000177173.8 |
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| CDS-3UTR GCA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCATCTCTATTCTTGGTaGCTCCATTTGCCTCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: LLLNWFGNPGYDHGKRELHLYSW*LHLPLN Trigger: ATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATG...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR GCA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGACATCTTGGGCTCTaGCATCAAAATGTTGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKRHLGL*HQNVAQ Trigger: TTGAGCAACATTTTGATGGCAGAGCCCAAGATGTCT...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175802.8 |
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| CDS-3UTR CCA 90 bp | TGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGCCATCAAAATGTTGCTaGGACATCTCTATTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: CLPSLLLNWFGNPGYDHGPSKCC*DISILG Trigger: ACCAAGAATAGAGATGTCCCAGCAACATTTTGATGG...CCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 |
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| CDS-3UTR CCA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGCCATCAAAATGTTGCTaGGACATCTCTATTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRPSKCC*DISILG Trigger: ACCAAGAATAGAGATGTCCCAGCAACATTTTGATGG...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177508.8 |
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| CDS-3UTR CCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACAACCTCAATGGTTATaGTACATGAACCTGATCGGT | + |
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Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKREQPQWL*YMNLIG Trigger: ACCGATCAGGTTCATGTACCATAACCATTGAGGTTG...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000177173.8 |
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| CDS-3UTR GCA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAATTCCAAGGAACTAGATaGACAATAATGGTGGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKFQGTR*TIMVVV Trigger: TACAACCACCATTATTGTGCATCTAGTTCCTTGGAA...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR GCA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAATTCCAAGGAACTAGATaGACAATAATGGTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLNWFGNPGYDHGKREFQGTR*TIMVVV Trigger: TACAACCACCATTATTGTGCATCTAGTTCCTTGGAA...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS TCA 90 bp | TGCTTGGTGCCTGTAGGGACGGGGCCAACCCCCGGAGGATCCTGCTaGGGAGCCAACCCAGAGCCAGAAGGAGAACTGCACCAGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLVPVGTGPTPGGSC*GANPEPEGELHQLL Trigger: CAGCAACTGGTGCAGTTCTCCTTCTGGCTCTGGGTTGGCTCCTCAGCAGGATCCTCCGGGGGTTGGCCCCGTCCCTACAGGCACCAAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS TCA 90 bp | GTGAGCGCGTCCAGCACAGTGCCCACGAGTGAGGTCTCTGGAATTTaGGTCACCAGTAGCGCTGGATGGCAGCGTGGGGGCCACTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: VSASSTVPTSEVSGI*VTSSAGWQRGGHWF Trigger: AAACCAGTGGCCCCCACGCTGCCATCCAGCGCTACTGGTGACTCAAATTCCAGAGACCTCACTCGTGGGCACTGTGCTGGACGCGCTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS TCA 90 bp | AGTGCAGCGGATCCGCCCCGGGTCCCGCTGCACATGAACGAAGATTaGTCCGTCTACCACAAAGTTACCACATCTGTACTGCAGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SAADPPRVPLHMNED*SVYHKVTTSVLQLQ Trigger: CTGCAGCTGCAGTACAGATGTGGTAACTTTGTGGTAGACGGATCAATCTTCGTTCATGTGCAGCGGGACCCGGGGCGGATCCGCTGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 90 bp | AGGGTTTTGGGCACTGGTAATGTTTATCTGGGCTCTCTGGACTCCTaGCAGCAACAGAGTGTACACCAGGGCCCCGGGTGTGATGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RVLGTGNVYLGSLDS*QQQSVHQGPGCDGL Trigger: GAGACCATCACACCCGGGGCCCTGGTGTACACTCTGTTGCTGCCAGGAGTCCAGAGAGCCCAGATAAACATTACCAGTGCCCAAAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 90 bp | GAGAAAGGCCCAGGGGAAGGGTTTTGGGCACTGGTAATGTTTATCTaGGCTCTCTGGACTCCTGGCAGCAACAGAGTGTACACCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: EKGPGEGFWALVMFI*ALWTPGSNRVYTRA Trigger: GGCCCTGGTGTACACTCTGTTGCTGCCAGGAGTCCAGAGAGCCCAGATAAACATTACCAGTGCCCAAAACCCTTCCCCTGGGCCTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 90 bp | ACCACCTCGCTCCCAGGAACCAGATCCTCTGAGATGGTAATGCTCTaGGCCTTCTGTAGGAAGGAGACTTGGCTGGAGGGTGCAGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: TTSLPGTRSSEMVML*AFCRKETWLEGAGK Trigger: TTTGCCTGCACCCTCCAGCCAAGTCTCCTTCCTACAGAAGGCCCAGAGCATTACCATCTCAGAGGATCTGGTTCCTGGGAGCGAGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS TCA 90 bp | GCAAAAGCACCAGTGCAGCGGATCCGCCCCGGGTCCCGCTGCACATaGACGAAGATTGATCCGTCTACCACAAAGTTACCACATCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: AKAPVQRIRPGSRCT*TKIDPSTTKLPHLY Trigger: GTACAGATGTGGTAACTTTGTGGTAGACGGATCAATCTTCGTTCATGTGCAGCGGGACCCGGGGCGGATCCGCTGCACTGGTGCTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS TCA 90 bp | TCTGGTCATTTGGGGTTGACCACCATCGACCACCAAGATGGAAGCTaGATGCTGGAAGCAAGCCCCAGGTGTGTCACAGTCCAACGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGHLGLTTIDHQDGS*MLEASPRCVTVQRS Trigger: GCTACGTTGGACTGTGACACACCTGGGGCTTGCTTCCAGCATTCAGCTTCCATCTTGGTGGTCGATGGTGGTCAACCCCAAATGACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175759.8 |
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| CDS GCA 90 bp | GTATGGAAGGGCCCACATCTGCAACATGGATCAATAGCTCATAGGTaGAGGGCTGCTCTGGCCATGGAGGCCCCAACACAGTGTCATTGT | + |
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Preference number: 5 (lower is better) Translates to: VWKGPHLQHGSIAHR*RAALAMEAPTQCHC Trigger: ACAATGACACTGTGTTGGGGCCTCCATGGCCAGAGCAGCCCTGCACCTATGAGCTATTGATCCATGTTGCAGATGTGGGCCCTTCCATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
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| CDS GCA 90 bp | TCACAATCAGGGGTGTCATTGTTGAGGACACTGTGCTTTGGTGGGTaGTGGTGGCCACCGTGCTGGCCTTCCAAGGAACTAGATGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SQSGVSLLRTLCFGG*WWPPCWPSKELDAQ Trigger: TTGTGCATCTAGTTCCTTGGAAGGCCAGCACGGTGGCCACCAGCACCCACCAAAGCACAGTGTCCTCAACAATGACACCCCTGATTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS CCA 90 bp | TCCTCTGAGATGGTAATGCTCTGGGCCTTCTGTAGGAAGGAGACTTaGCTGGAGGGTGCAGGCAAAACCTTCACTGTCAGCATCCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: SSEMVMLWAFCRKET*LEGAGKTFTVSIPL Trigger: CAGAGGGATGCTGACAGTGAAGGTTTTGCCTGCACCCTCCAGCCAAGTCTCCTTCCTACAGAAGGCCCAGAGCATTACCATCTCAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 90 bp | ACCTCTGCTGCTCATAGTCCAAAGGCCCCAGGAGGTGAAGTTCTCTaGTCATTTGGGGTTGACCACCATCGACCACCAAGATGGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: TSAAHSPKAPGGEVL*SFGVDHHRPPRWKL Trigger: CAGCTTCCATCTTGGTGGTCGATGGTGGTCAACCCCAAATGACCAGAGAACTTCACCTCCTGGGGCCTTTGGACTATGAGCAGCAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175759.8 |
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| CDS TCA 90 bp | TGCCTCTCAATAGGTCCTTCATTTCCCTGGATGCTGTTTAGCAACTaGGCTTTGGCTGGTTTGCTTGGTGCCTGTAGGGACGGGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: CLSIGPSFPWMLFSN*ALAGLLGACRDGAN Trigger: GTTGGCCCCGTCCCTACAGGCACCAAGCAAACCAGCCAAAGCTCAGTTGCTAAACAGCATCCAGGGAAATGAAGGACCTATTGAGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS CCA 90 bp | AGCAATCCCTGTTCATCAATGGAGAAAGGCCCAGGGGAAGGGTTTTaGGCACTGGTAATGTTTATCTGGGCTCTCTGGACTCCTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SNPCSSMEKGPGEGF*ALVMFIWALWTPGS Trigger: GCTGCCAGGAGTCCAGAGAGCCCAGATAAACATTACCAGTGCCCAAAACCCTTCCCCTGGGCCTTTCTCCATTGATGAACAGGGATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 90 bp | GAAGTTCTCTGGTCATTTGGGGTTGACCACCATCGACCACCAAGATaGAAGCTGAATGCTGGAAGCAAGCCCCAGGTGTGTCACAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: EVLWSFGVDHHRPPR*KLNAGSKPQVCHSP Trigger: TGGACTGTGACACACCTGGGGCTTGCTTCCAGCATTCAGCTTCCATCTTGGTGGTCGATGGTGGTCAACCCCAAATGACCAGAGAACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175759.8 |
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| CDS TCA 90 bp | GCTGTAGGAGAGGGTCAAACGCTGTGGCTCTTGTGGGATCCAACATaGCACCTTAGTCACCTCCATGCTATGACCCATGGGAGTGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: AVGEGQTLWLLWDPT*HLSHLHAMTHGSVD Trigger: ATCTACACTCCCATGGGTCATAGCATGGAGGTGACTAAGGTGTCATGTTGGATCCCACAAGAGCCACAGCGTTTGACCCTCTCCTACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS GCA 90 bp | AAAGTTACCACATCTGTACTGCAGCTGCAGCTCATACTGGTTCACTaGAAGGGCATCCAGCCGAGCAGAGCTACTCAAGGACACCATCAC | + |
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Preference number: 5 (lower is better) Translates to: KVTTSVLQLQLILVH*KGIQPSRATQGHHH Trigger: GTGATGGTGTCCTTGAGTAGCTCTGCTCGGCTGGATGCCCTTGCAGTGAACCAGTATGAGCTGCAGCTGCAGTACAGATGTGGTAACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 90 bp | TCTACCACAAAGTTACCACATCTGTACTGCAGCTGCAGCTCATACTaGTTCACTGCAAGGGCATCCAGCCGAGCAGAGCTACTCAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: STTKLPHLYCSCSSY*FTARASSRAELLKD Trigger: GTCCTTGAGTAGCTCTGCTCGGCTGGATGCCCTTGCAGTGAACCAGTATGAGCTGCAGCTGCAGTACAGATGTGGTAACTTTGTGGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS-3UTR CAA 90 bp | ATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTCACCAGGATGGCCCCTaGCAGTCTAAACCGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: IGLEIQAMIMGKGNSPQSHQDGP*QSKPAL Trigger: CAGAGCCGGTTTAGACTGCAAGGGGCCATCCTGGTG...ACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
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| CDS-3UTR CAA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCACTTTGGCTGGTTTGCTaGGTGCCTGTAGGGACGGGG | + |
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Preference number: 5 (lower is better) Translates to: LEIQAMIMGKGNSPQSKALWLVC*VPVGTG Trigger: CCCCGTCCCTACAGGCACCAAGCAAACCAGCCAAAG...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CAA 90 bp | ATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTGCTGGGGAGAACTCGTaGACGGGTGTCACCATCACC | + |
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Preference number: 5 (lower is better) Translates to: IGLEIQAMIMGKGNSPQSAGENS*TGVTIT Trigger: GGTGATGGTGACACCCGTCAACGAGTTCTCCCCAGC...ACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS GCA 90 bp | AAGATTGATCCGTCTACCACAAAGTTACCACATCTGTACTGCAGCTaGAGCTCATACTGGTTCACTGCAAGGGCATCCAGCCGAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: KIDPSTTKLPHLYCS*SSYWFTARASSRAE Trigger: CTCTGCTCGGCTGGATGCCCTTGCAGTGAACCAGTATGAGCTGCAGCTGCAGTACAGATGTGGTAACTTTGTGGTAGACGGATCAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 90 bp | CATCTTGGGCTCTGCCATCAAAATGTTGCAGGCTCATGGCAGTTCTaGGTACCTGGGACATCTCTATTCTTGGTGCCTCCATTTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: HLGLCHQNVAGSWQF*VPGTSLFLVPPFAS Trigger: AGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGGTACCCAGAACTGCCATGAGCCTGCAACATTTTGATGGCAGAGCCCAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 90 bp | CCATACAGACATCTTGGGCTCTGCCATCAAAATGTTGCAGGCTCATaGCAGTTCTGGGTACCTGGGACATCTCTATTCTTGGTGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PYRHLGLCHQNVAGS*QFWVPGTSLFLVPP Trigger: TGGAGGCACCAAGAATAGAGATGTCCCAGGTACCCAGAACTGCCATGAGCCTGCAACATTTTGATGGCAGAGCCCAAGATGTCTGTATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 90 bp | GCTCTGCCATCAAAATGTTGCAGGCTCATGGCAGTTCTGGGTACCTaGGACATCTCTATTCTTGGTGCCTCCATTTGCCTCTCAATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALPSKCCRLMAVLGT*DISILGASICLSIG Trigger: ACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGGTACCCAGAACTGCCATGAGCCTGCAACATTTTGATGGCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS-3UTR CAA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAACCCAACACAGTGTCATaGTACACCAGGATGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKPNTVS*YTRMAP Trigger: AGGGGCCATCCTGGTGTACAATGACACTGTGTTGGG...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
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| CDS-3UTR CAA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCACCCAACACAGTGTCATaGTACACCAGGATGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAPNTVS*YTRMAP Trigger: AGGGGCCATCCTGGTGTACAATGACACTGTGTTGGG...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
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| CDS GCA 90 bp | GCAGTTCTGGGTACCTGGGACATCTCTATTCTTGGTGCCTCCATTTaGCTCTCAATAGGTCCTTCATTTCCCTGGATGCTGTTTAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AVLGTWDISILGASI*LSIGPSFPWMLFSN Trigger: GTTGCTAAACAGCATCCAGGGAAATGAAGGACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGGTACCCAGAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS-3UTR CAA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCAGGAGAACTGCACCAGTaGCTGTCAGCACTACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAGELHQ*LSALPQ Trigger: TTGTGGTAGTGCTGACAGCAACTGGTGCAGTTCTCC...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CAA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGGGAGAACTGCACCAGTaGCTGTCAGCACTACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: NWFGNPGYDHGKRELPTEGELHQ*LSALPQ Trigger: TTGTGGTAGTGCTGACAGCAACTGGTGCAGTTCTCC...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS CCA 90 bp | TCTCTCCCCATACAGACATCTTGGGCTCTGCCATCAAAATGTTGCTaGGACATCTCTATTCTTGGTGCCTCCATTTGCCTCTCAATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPIQTSWALPSKCC*DISILGASICLSIG Trigger: ACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGCAACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177508.8 |
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| CDS CCA 90 bp | TTCCAAGGAACTAGATGCACAATAATGGTGGTTGTAGTGCTGAGGTaGGGTATGGAAGGGCCCACATCTGCAACATGGATCAATAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FQGTRCTIMVVVVLR*GMEGPTSATWINSS Trigger: TGAGCTATTGATCCATGTTGCAGATGTGGGCCCTTCCATACCCCACCTCAGCACTACAACCACCATTATTGTGCATCTAGTTCCTTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
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| CDS-3UTR CAA 90 bp | ATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTGGGACATCTCTATTCTaGGTGCCTCCATTTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IGLEIQAMIMGKGNSPQSGTSLF*VPPFAS Trigger: AGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCC...ACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CAA 90 bp | AATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGGGGACATCTCTATTCTaGGTGCCTCCATTTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NWFGNPGYDHGKRELPTEGTSLF*VPPFAS Trigger: AGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCC...CTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CAA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAACCCCATACAGACATCTaGGGCTCTGCCATCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKPHTDI*GSAIKM Trigger: CATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGG...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS-3UTR CAA 90 bp | TTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAAGCACCCCATACAGACATCTaGGGCTCTGCCATCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LEIQAMIMGKGNSPQSKAPHTDI*GSAIKM Trigger: CATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGG...TGCTTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGCTTTGGCTGGTTTGCTaGGTGCCTGTAGGGACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRLWLVC*VPVGTG Trigger: CCCCGTCCCTACAGGCACCAAGCAAACCAGCCAAAG...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAAATTCAAAGGCCCTCACTaGCAGTTTTGTGACCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLEIQAMIMGKGNSPQSKFKGPH*QFCDHG Trigger: GCCATGGTCACAAAACTGCAAGTGAGGGCCTTTGAA...TTTACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CAA 90 bp | TTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCGGAGAACTGCACCAGTaGCTGTCAGCACTACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LLNWFGNPGYDHGKRELPGELHQ*LSALPQ Trigger: TTGTGGTAGTGCTGACAGCAACTGGTGCAGTTCTCC...GGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | CTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACATCAGGGGTGTCATTGTaGAGGACACTGTGCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LNWFGNPGYDHGKRELPTSGVSL*RTLCFG Trigger: ACCAAAGCACAGTGTCCTCAACAATGACACCCCTGA...TGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCTTTGGCTGGTTTGCTaGGTGCCTGTAGGGACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLNWFGNPGYDHGKRELLWLVC*VPVGTG Trigger: CCCCGTCCCTACAGGCACCAAGCAAACCAGCCAAAG...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | ATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAGAGTAGCAGAATGGTGATCTaGTACAACCTCTGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IGLEIQAMIMGKGNSPQSSRMVI*YNLCCS Trigger: TGAGCAGCAGAGGTTGTACAAGATCACCATTCTGCT...ACTCTGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000177173.8 |
||
| CDS GCA 90 bp | CCATCAAAATGTTGCTGGGACATCTCTATTCTTGGTGCCTCCATTTaGCTCTCAATAGGTCCTTCATTTCCCTGGATGCTGTTTAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSKCCWDISILGASI*LSIGPSFPWMLFSN Trigger: GTTGCTAAACAGCATCCAGGGAAATGAAGGACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGCAACATTTTGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | TTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCGGGACATCTCTATTCTaGGTGCCTCCATTTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLNWFGNPGYDHGKRELPGTSLF*VPPFAS Trigger: AGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCC...GGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATCACCAGGATGGCCCCTaGCAGTCTAAACCGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FCLPSLLLNWFGNPGYDHHQDGP*QSKPAL Trigger: CAGAGCCGGTTTAGACTGCAAGGGGCCATCCTGGTG...ATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS-3UTR CAA 90 bp | CTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCACAAGCAGAATGGTGATCTaGTACAACCTCTGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LNWFGNPGYDHGKRELPTSRMVI*YNLCCS Trigger: TGAGCAGCAGAGGTTGTACAAGATCACCATTCTGCT...TGTGGGGAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CAA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGCCCCATACAGACATCTaGGGCTCTGCCATCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRPHTDI*GSAIKM Trigger: CATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGG...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGTCAGGGGTGTCATTGTaGAGGACACTGTGCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRSGVSL*RTLCFG Trigger: ACCAAAGCACAGTGTCCTCAACAATGACACCCCTGA...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | CCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGAAGTTCTCTGGTCATTaGGGGTTGACCACCATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSLLLNWFGNPGYDHGKRKFSGH*GLTTID Trigger: GTCGATGGTGGTCAACCCCAAATGACCAGAGAACTT...CCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175759.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGAGAACTGCACCAGTaGCTGTCAGCACTACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: FCLPSLLLNWFGNPGYDHGELHQ*LSALPQ Trigger: TTGTGGTAGTGCTGACAGCAACTGGTGCAGTTCTCC...ATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTCTGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATTCTTGGTGCCTCCATTaGCCTCTCAATAGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFCLPSLLLNWFGNPGYDSWCLH*PLNRSF Trigger: GAAGGACCTATTGAGAGGCAAATGGAGGCACCAAGA...ATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACAGAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAGGGACATCTCTATTCTaGGTGCCTCCATTTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKGTSLF*VPPFAS Trigger: AGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCC...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTCTGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATGGGACATCTCTATTCTaGGTGCCTCCATTTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VFCLPSLLLNWFGNPGYDGTSLF*VPPFAS Trigger: AGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCC...ATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACAGAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CAA 90 bp | TTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAACTCCCCCATACAGACATCTaGGGCTCTGCCATCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LLLNWFGNPGYDHGKRELPHTDI*GSAIKM Trigger: CATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGG...GAGTTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTCTGTTTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCCCCATACAGACATCTaGGGCTCTGCCATCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: VFCLPSLLLNWFGNPGYDPHTDI*GSAIKM Trigger: CATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGG...ATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAAACAGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCGTCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAATCAGGGGTGTCATTGTaGAGGACACTGTGCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPSLLLNWFGNPGYDHGKSGVSL*RTLCFG Trigger: ACCAAAGCACAGTGTCCTCAACAATGACACCCCTGA...TTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGACGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTATTACTAAATTGGTTTGGAAATCCAGGCTATGATCATGGGAAAAGGGAAAGCAGAATGGTGATCTaGTACAACCTCTGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLLNWFGNPGYDHGKRESRMVI*YNLCCS Trigger: TGAGCAGCAGAGGTTGTACAAGATCACCATTCTGCT...TTCCCTTTTCCCATGATCATAGCCTGGATTTCCAAACCAATTTAGTAATAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000175802.8 ENSMUST00000177173.8 |
||
| CDS TCA 72 bp | CCTGTAGGGACGGGGCCAACCCCCGGAGGATCCTGCTaGGGAGCCAACCCAGAGCCAGAAGGAGAACTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PVGTGPTPGGSC*GANPEPEGELH Trigger: GTGCAGTTCTCCTTCTGGCTCTGGGTTGGCTCCTCAGCAGGATCCTCCGGGGGTTGGCCCCGTCCCTACAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS CCA 72 bp | GTCACCAGTAGCGCTGGATGGCAGCGTGGGGGCCACTaGTTTACCGCGCGCACGCTAACCGTGAGATCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VTSSAGWQRGGH*FTARTLTVRSN Trigger: GTTCGATCTCACGGTTAGCGTGCGCGCGGTAAACCAGTGGCCCCCACGCTGCCATCCAGCGCTACTGGTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CAA 72 bp | ACTGGCCCAGGGCCGGGGCCTTTCAAAGGCCCTCACTaGCAGTTTTGTGACCATGGCGCCCTGAACGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGPGPGPFKGPH*QFCDHGALNAS Trigger: GCTCGCGTTCAGGGCGCCATGGTCACAAAACTGCAAGTGAGGGCCTTTGAAAGGCCCCGGCCCTGGGCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS CCA 72 bp | AGTACCAGTAGCGCTGGATGGCAGCGTGGGGGCCACTaGTTTACCGCGCGCACGCTAACCGTGAGATCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: STSSAGWQRGGH*FTARTLTVRSN Trigger: GTTCGATCTCACGGTTAGCGTGCGCGCGGTAAACCAGTGGCCCCCACGCTGCCATCCAGCGCTACTGGTACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176306.8 |
||
| CDS TCA 72 bp | TCCAGCACAGTGCCCACGAGTGAGGTCTCTGGAATTTaGGTCACCAGTAGCGCTGGATGGCAGCGTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSTVPTSEVSGI*VTSSAGWQRGG Trigger: GCCCCCACGCTGCCATCCAGCGCTACTGGTGACTCAAATTCCAGAGACCTCACTCGTGGGCACTGTGCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS TCA 72 bp | GTCCTTCATTTCCCTGGATGCCCCGGAGGATCCTGCTaGGGAGCCAACCCAGAGCCAGAAGGAGAACTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VLHFPGCPGGSC*GANPEPEGELH Trigger: GTGCAGTTCTCCTTCTGGCTCTGGGTTGGCTCCTCAGCAGGATCCTCCGGGGCATCCAGGGAAATGAAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000176373.3 |
||
| CDS CAA 72 bp | GGCTGCTCTGGCCATGGAGGCCCCAACACAGTGTCATaGTACACCAGGATGGCCCCTTGCAGTCTAAACCGG | + |
|
Preference number: 6 (lower is better) Translates to: GCSGHGGPNTVS*YTRMAPCSLNR Trigger: CCGGTTTAGACTGCAAGGGGCCATCCTGGTGTACAATGACACTGTGTTGGGGCCTCCATGGCCAGAGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS TCA 72 bp | CCAGTGCAGCGGATCCGCCCCGGGTCCCGCTGCACATaGACGAAGATTGATCCGTCTACCACAAAGTTACCA | + |
|
Preference number: 6 (lower is better) Translates to: PVQRIRPGSRCT*TKIDPSTTKLP Trigger: TGGTAACTTTGTGGTAGACGGATCAATCTTCGTTCATGTGCAGCGGGACCCGGGGCGGATCCGCTGCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS GCA 72 bp | GGCCCACATCTGCAACATGGATCAATAGCTCATAGGTaGAGGGCTGCTCTGGCCATGGAGGCCCCAACACAG | + |
|
Preference number: 6 (lower is better) Translates to: GPHLQHGSIAHR*RAALAMEAPTQ Trigger: CTGTGTTGGGGCCTCCATGGCCAGAGCAGCCCTGCACCTATGAGCTATTGATCCATGTTGCAGATGTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS GCA 72 bp | GGGGTGTCATTGTTGAGGACACTGTGCTTTGGTGGGTaGTGGTGGCCACCGTGCTGGCCTTCCAAGGAACTA | + |
|
Preference number: 6 (lower is better) Translates to: GVSLLRTLCFGG*WWPPCWPSKEL Trigger: TAGTTCCTTGGAAGGCCAGCACGGTGGCCACCAGCACCCACCAAAGCACAGTGTCCTCAACAATGACACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS CCA 72 bp | GCCTCCATTTGCCTCTCAATAGGTCCTTCATTTCCCTaGATGCCCCGGAGGATCCTGCTGAGGAGCCAACCC | + |
|
Preference number: 6 (lower is better) Translates to: ASICLSIGPSFP*MPRRILLRSQP Trigger: GGGTTGGCTCCTCAGCAGGATCCTCCGGGGCATCCAGGGAAATGAAGGACCTATTGAGAGGCAAATGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000176373.3 |
||
| CDS CCA 72 bp | CCTGGGATGGTGCCCGAAGCAATCCCTGTTCATCAATaGAGAAAGGCCCAGGGGAAGGGTTTTGGGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGMVPEAIPVHQ*RKAQGKGFGHW Trigger: CCAGTGCCCAAAACCCTTCCCCTGGGCCTTTCTCCATTGATGAACAGGGATTGCTTCGGGCACCATCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS CAA 90 bp | CCATGGAGGCCCCAACACAGTGTCATTGTACACCAGGATGGCCCCTaGCAGTCTAAACCGGCTCTGGCTATTCCCTCCCACGATGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PWRPQHSVIVHQDGP*QSKPALAIPSHDAV Trigger: TACAGCATCGTGGGAGGGAATAGCCAGAGCCGGTTTAGACTGCAAGGGGCCATCCTGGTGTACAATGACACTGTGTTGGGGCCTCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS CAA 90 bp | CAGTGCAGCGGATCCGCCCCGGGTCCCGCTGCACATGAACGAAGATaGATCCGTCTACCACAAAGTTACCACATCTGTACTGCAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QCSGSAPGPAAHERR*IRLPQSYHICTAAA Trigger: TGCAGCTGCAGTACAGATGTGGTAACTTTGTGGTAGACGGATCAATCTTCGTTCATGTGCAGCGGGACCCGGGGCGGATCCGCTGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS GCA 72 bp | CCCAACACAGTGTCATTGTACACCAGGATGGCCCCTTaGAGTCTAAACCGGCTCTGGCTATTCCCTCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: PNTVSLYTRMAP*SLNRLWLFPPT Trigger: CGTGGGAGGGAATAGCCAGAGCCGGTTTAGACTGCAAGGGGCCATCCTGGTGTACAATGACACTGTGTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS GCA 72 bp | GGTCTTTTGAGCCTGGCCTCTGAGGCCCTGGGATGGTaGCCGAAGCAATCCCTGTTCATCAATGGAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLLSLASEALGW*PKQSLFINGER Trigger: CCTTTCTCCATTGATGAACAGGGATTGCTTCGGGCACCATCCCAGGGCCTCAGAGGCCAGGCTCAAAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS CCA 72 bp | TGTGATGGTCTCTGGCACATAAATGAATTCCCCAGCTaGGCTGGCAAAAGCACCAGTGCAGCGGATCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CDGLWHINEFPS*AGKSTSAADPP Trigger: GGGCGGATCCGCTGCACTGGTGCTTTTGCCAGCCCAGCTGGGGAATTCATTTATGTGCCAGAGACCATCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS CCA 72 bp | CAGAGTGTACACCAGGGCCCCGGGTGTGATGGTCTCTaGCACATAAATGAATTCCCCAGCTGGGCTGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QSVHQGPGCDGL*HINEFPSWAGK Trigger: TTTGCCAGCCCAGCTGGGGAATTCATTTATGTGCCAGAGACCATCACACCCGGGGCCCTGGTGTACACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS CAA 72 bp | CCCCAACACAGTGTCATTGTACACCAGGATGGCCCCTaGCAGTCTAAACCGGCTCTGGCTATTCCCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PQHSVIVHQDGP*QSKPALAIPSH Trigger: GTGGGAGGGAATAGCCAGAGCCGGTTTAGACTGCAAGGGGCCATCCTGGTGTACAATGACACTGTGTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
||
| CDS GCA 72 bp | CTGGTGGCCACCGTGCTGGCCTTCCAAGGAACTAGATaGACAATAATGGTGGTTGTAGTGCTGAGGTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LVATVLAFQGTR*TIMVVVVLRWG Trigger: ACCCCACCTCAGCACTACAACCACCATTATTGTGCATCTAGTTCCTTGGAAGGCCAGCACGGTGGCCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS CCA 72 bp | TCATTGTTGAGGACACTGTGCTTTGGTGGGTGCTGGTaGCCACCGTGCTGGCCTTCCAAGGAACTAGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLLRTLCFGGCW*PPCWPSKELDA Trigger: TGCATCTAGTTCCTTGGAAGGCCAGCACGGTGGCCACCAGCACCCACCAAAGCACAGTGTCCTCAACAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
||
| CDS CCA 72 bp | CTCCCAGGAACCAGATCCTCTGAGATGGTAATGCTCTaGGCCTTCTGTAGGAAGGAGACTTGGCTGGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPGTRSSEMVML*AFCRKETWLEG Trigger: ACCCTCCAGCCAAGTCTCCTTCCTACAGAAGGCCCAGAGCATTACCATCTCAGAGGATCTGGTTCCTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
||
| CDS CAA 72 bp | GTCCAAAGGCCCCAGGAGGTGAAGTTCTCTGGTCATTaGGGGTTGACCACCATCGACCACCAAGATGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VQRPQEVKFSGH*GLTTIDHQDGS Trigger: GCTTCCATCTTGGTGGTCGATGGTGGTCAACCCCAAATGACCAGAGAACTTCACCTCCTGGGGCCTTTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175759.8 |
||
| CDS TCA 72 bp | GATCCGCCCCGGGTCCCGCTGCACATGAACGAAGATTaGTCCGTCTACCACAAAGTTACCACATCTGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: DPPRVPLHMNED*SVYHKVTTSVL Trigger: CAGTACAGATGTGGTAACTTTGTGGTAGACGGATCAATCTTCGTTCATGTGCAGCGGGACCCGGGGCGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS TCA 72 bp | GAGGGTCAAACGCTGTGGCTCTTGTGGGATCCAACATaGCACCTTAGTCACCTCCATGCTATGACCCATGGG | + |
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Preference number: 6 (lower is better) Translates to: EGQTLWLLWDPT*HLSHLHAMTHG Trigger: CCCATGGGTCATAGCATGGAGGTGACTAAGGTGTCATGTTGGATCCCACAAGAGCCACAGCGTTTGACCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 72 bp | CTTCATTTCCCTGGATGCTGTTTAGCAACTGAGCTTTaGCTGGTTTGCTTGGTGCCTGTAGGGACGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LHFPGCCLATEL*LVCLVPVGTGP Trigger: TGGCCCCGTCCCTACAGGCACCAAGCAAACCAGCCAAAGCTCAGTTGCTAAACAGCATCCAGGGAAATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS CCA 72 bp | CCAGGGGAAGGGTTTTGGGCACTGGTAATGTTTATCTaGGCTCTCTGGACTCCTGGCAGCAACAGAGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: PGEGFWALVMFI*ALWTPGSNRVY Trigger: GTACACTCTGTTGCTGCCAGGAGTCCAGAGAGCCCAGATAAACATTACCAGTGCCCAAAACCCTTCCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 72 bp | ATGGTAATGCTCTGGGCCTTCTGTAGGAAGGAGACTTaGCTGGAGGGTGCAGGCAAAACCTTCACTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: MVMLWAFCRKET*LEGAGKTFTVS Trigger: GCTGACAGTGAAGGTTTTGCCTGCACCCTCCAGCCAAGTCTCCTTCCTACAGAAGGCCCAGAGCATTACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 72 bp | GCTCATAGTCCAAAGGCCCCAGGAGGTGAAGTTCTCTaGTCATTTGGGGTTGACCACCATCGACCACCAAGA | + |
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Preference number: 6 (lower is better) Translates to: AHSPKAPGGEVL*SFGVDHHRPPR Trigger: TCTTGGTGGTCGATGGTGGTCAACCCCAAATGACCAGAGAACTTCACCTCCTGGGGCCTTTGGACTATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175759.8 |
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| CDS CAA 72 bp | GGATCCGCCCCGGGTCCCGCTGCACATGAACGAAGATaGATCCGTCTACCACAAAGTTACCACATCTGTACT | + |
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Preference number: 6 (lower is better) Translates to: GSAPGPAAHERR*IRLPQSYHICT Trigger: AGTACAGATGTGGTAACTTTGTGGTAGACGGATCAATCTTCGTTCATGTGCAGCGGGACCCGGGGCGGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS GCA 72 bp | CCGTCTACCACAAAGTTACCACATCTGTACTGCAGCTaGAGCTCATACTGGTTCACTGCAAGGGCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PSTTKLPHLYCS*SSYWFTARASS Trigger: GCTGGATGCCCTTGCAGTGAACCAGTATGAGCTGCAGCTGCAGTACAGATGTGGTAACTTTGTGGTAGACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 72 bp | AAGTTACCACATCTGTACTGCAGCTGCAGCTCATACTaGTTCACTGCAAGGGCATCCAGCCGAGCAGAGCTA | + |
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Preference number: 6 (lower is better) Translates to: KLPHLYCSCSSY*FTARASSRAEL Trigger: TAGCTCTGCTCGGCTGGATGCCCTTGCAGTGAACCAGTATGAGCTGCAGCTGCAGTACAGATGTGGTAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CAA 72 bp | TTGAAGGAGAAAGGCCGAAGGACCGTCCCAGGGCCATaGTTCTCAGAAATATACATAGTCCAGGGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LKEKGRRTVPGP*FSEIYIVQGRL Trigger: CAGCCTGCCCTGGACTATGTATATTTCTGAGAACAATGGCCCTGGGACGGTCCTTCGGCCTTTCTCCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CAA 72 bp | CCCCATACAGACATCTTGGGCTCTGCCATCAAAATGTaGCAGGCTCATGGCAGTTCTGGGTACCTGGGACAT | + |
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Preference number: 6 (lower is better) Translates to: PHTDILGSAIKM*QAHGSSGYLGH Trigger: ATGTCCCAGGTACCCAGAACTGCCATGAGCCTGCAACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CAA 90 bp | AAGCAATCCCTGTTCATCAATGGAGAAAGGCCCAGGGGAAGGGTTTaGGGCACTGGTAATGTTTATCTGGGCTCTCTGGACTCCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KQSLFINGERPRGRV*GTGNVYLGSLDSWQ Trigger: CTGCCAGGAGTCCAGAGAGCCCAGATAAACATTACCAGTGCCCAAAACCCTTCCCCTGGGCCTTTCTCCATTGATGAACAGGGATTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CAA 90 bp | TCCCGTGAGTGTGTTGAACAGGTAATCTCTCCCCATACAGACATCTaGGGCTCTGCCATCAAAATGTTGCAGGCTCATGGCAGTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SRECVEQVISPHTDI*GSAIKMLQAHGSSG Trigger: CCCAGAACTGCCATGAGCCTGCAACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGGAGAGATTACCTGTTCAACACACTCACGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 72 bp | CTCTGCCATCAAAATGTTGCAGGCTCATGGCAGTTCTaGGTACCTGGGACATCTCTATTCTTGGTGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LCHQNVAGSWQF*VPGTSLFLVPP Trigger: TGGAGGCACCAAGAATAGAGATGTCCCAGGTACCCAGAACTGCCATGAGCCTGCAACATTTTGATGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CAA 72 bp | CTGTTCATCAATGGAGAAAGGCCCAGGGGAAGGGTTTaGGGCACTGGTAATGTTTATCTGGGCTCTCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: LFINGERPRGRV*GTGNVYLGSLD Trigger: GTCCAGAGAGCCCAGATAAACATTACCAGTGCCCAAAACCCTTCCCCTGGGCCTTTCTCCATTGATGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS TCA 72 bp | ATAGGTCCTTCATTTCCCTGGATGCTGTTTAGCAACTaGGCTTTGGCTGGTTTGCTTGGTGCCTGTAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: IGPSFPWMLFSN*ALAGLLGACRD Trigger: GTCCCTACAGGCACCAAGCAAACCAGCCAAAGCTCAGTTGCTAAACAGCATCCAGGGAAATGAAGGACCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175759.8 ENSMUST00000177173.8 ENSMUST00000177508.8 |
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| CDS GCA 72 bp | TGTTGCTGGGACATCTCTATTCTTGGTGCCTCCATTTaGCTCTCAATAGGTCCTTCATTTCCCTGGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: CCWDISILGASI*LSIGPSFPWMP Trigger: GGGCATCCAGGGAAATGAAGGACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000176373.3 |
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| CDS GCA 72 bp | GGTACCTGGGACATCTCTATTCTTGGTGCCTCCATTTaGCTCTCAATAGGTCCTTCATTTCCCTGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: GTWDISILGASI*LSIGPSFPWML Trigger: CAGCATCCAGGGAAATGAAGGACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS GCA 72 bp | GGCAGTTCTGGGTACCTGGGACATCTCTATTCTTGGTaGCTCCATTTGCCTCTCAATAGGTCCTTCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: GSSGYLGHLYSW*LHLPLNRSFIS Trigger: GGAAATGAAGGACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGGTACCCAGAACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS GCA 72 bp | ACAGGTAATCTCTCCCCATACAGACATCTTGGGCTCTaGCATCAAAATGTTGCAGGCTCATGGCAGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: TGNLSPYRHLGL*HQNVAGSWQFW Trigger: CCAGAACTGCCATGAGCCTGCAACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGGAGAGATTACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 72 bp | ACTAGATGCACAATAATGGTGGTTGTAGTGCTGAGGTaGGGTATGGAAGGGCCCACATCTGCAACATGGATC | + |
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Preference number: 6 (lower is better) Translates to: TRCTIMVVVVLR*GMEGPTSATWI Trigger: GATCCATGTTGCAGATGTGGGCCCTTCCATACCCCACCTCAGCACTACAACCACCATTATTGTGCATCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176334.8 ENSMUST00000177173.8 |
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| CDS CCA 72 bp | TGTTCATCAATGGAGAAAGGCCCAGGGGAAGGGTTTTaGGCACTGGTAATGTTTATCTGGGCTCTCTGGACT | + |
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Preference number: 6 (lower is better) Translates to: CSSMEKGPGEGF*ALVMFIWALWT Trigger: AGTCCAGAGAGCCCAGATAAACATTACCAGTGCCCAAAACCCTTCCCCTGGGCCTTTCTCCATTGATGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 72 bp | TCAAAATGTTGCAGGCTCATGGCAGTTCTGGGTACCTaGGACATCTCTATTCTTGGTGCCTCCATTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SKCCRLMAVLGT*DISILGASICL Trigger: GAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGGTACCCAGAACTGCCATGAGCCTGCAACATTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 72 bp | CATCTTGGGCTCTGCCATCAAAATGTTGCAGGCTCATaGCAGTTCTGGGTACCTGGGACATCTCTATTCTTG | + |
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Preference number: 6 (lower is better) Translates to: HLGLCHQNVAGS*QFWVPGTSLFL Trigger: CAAGAATAGAGATGTCCCAGGTACCCAGAACTGCCATGAGCCTGCAACATTTTGATGGCAGAGCCCAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS GCA 72 bp | TGTTGCTGGGACATCTCTATTCTTGGTGCCTCCATTTaGCTCTCAATAGGTCCTTCATTTCCCTGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: CCWDISILGASI*LSIGPSFPWML Trigger: CAGCATCCAGGGAAATGAAGGACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175759.8 ENSMUST00000177508.8 |
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| CDS GCA 72 bp | ATTGATCCGTCTACCACAAAGTTACCACATCTGTACTaGAGCTGCAGCTCATACTGGTTCACTGCAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: IDPSTTKLPHLY*SCSSYWFTARA Trigger: TGCCCTTGCAGTGAACCAGTATGAGCTGCAGCTGCAGTACAGATGTGGTAACTTTGTGGTAGACGGATCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CCA 72 bp | CATGGCAGTTCTGGGTACCTGGGACATCTCTATTCTTaGTGCCTCCATTTGCCTCTCAATAGGTCCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: HGSSGYLGHLYS*CLHLPLNRSFI Trigger: AATGAAGGACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGGTACCCAGAACTGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CAA 72 bp | TGTGTTGAACAGGTAATCTCTCCCCATACAGACATCTaGGGCTCTGCCATCAAAATGTTGCAGGCTCATGGC | + |
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Preference number: 6 (lower is better) Translates to: CVEQVISPHTDI*GSAIKMLQAHG Trigger: GCCATGAGCCTGCAACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGGAGAGATTACCTGTTCAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177173.8 |
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| CDS CAA 90 bp | TCCCGTGAGTGTGTTGAACAGGTAATCTCTCCCCATACAGACATCTaGGGCTCTGCCATCAAAATGTTGCTCAACCTCAATGGTTATGGT | + |
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Preference number: 6 (lower is better) Translates to: SRECVEQVISPHTDI*GSAIKMLLNLNGYG Trigger: ACCATAACCATTGAGGTTGAGCAACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGGAGAGATTACCTGTTCAACACACTCACGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175802.8 |
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| CDS GCA 72 bp | GCCATCAAAATGTTGCTGGGACATCTCTATTCTTGGTaGCTCCATTTGCCTCTCAATAGGTCCTTCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: AIKMLLGHLYSW*LHLPLNRSFIS Trigger: GGAAATGAAGGACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGCAACATTTTGATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177508.8 |
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| CDS GCA 72 bp | ACAGGTAATCTCTCCCCATACAGACATCTTGGGCTCTaGCATCAAAATGTTGCTGGGACATCTCTATTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TGNLSPYRHLGL*HQNVAGTSLFL Trigger: CAAGAATAGAGATGTCCCAGCAACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGGAGAGATTACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177508.8 |
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| CDS GCA 72 bp | CCCATACAGACATCTTGGGCTCTGCCATCAAAATGTTaGTCAACCTCAATGGTTATGGTACATGAACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: PIQTSWALPSKC*STSMVMVHEPD Trigger: ATCAGGTTCATGTACCATAACCATTGAGGTTGAGCAACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175802.8 |
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| CDS CCA 72 bp | TCTGCCATCAAAATGTTGCTGGGACATCTCTATTCTTaGTGCCTCCATTTGCCTCTCAATAGGTCCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SAIKMLLGHLYS*CLHLPLNRSFI Trigger: AATGAAGGACCTATTGAGAGGCAAATGGAGGCACCAAGAATAGAGATGTCCCAGCAACATTTTGATGGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000175759.8 ENSMUST00000176334.8 ENSMUST00000176373.3 ENSMUST00000177508.8 |
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| CDS CAA 72 bp | TGTGTTGAACAGGTAATCTCTCCCCATACAGACATCTaGGGCTCTGCCATCAAAATGTTGCTCAACCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: CVEQVISPHTDI*GSAIKMLLNLN Trigger: ATTGAGGTTGAGCAACATTTTGATGGCAGAGCCCAAGATGTCTGTATGGGGAGAGATTACCTGTTCAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175802.8 |
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