Pregenerated sensors for CDHR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035860Ensembl transcript IDs: ENSMUST00000095774.3
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGGACCGCTCAGTCTTTGATGCTGGAGCCACCATCTTAGAGCTCTaGGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: RDRSVFDAGATILEL*DRVLPWLCLLPLGQ Trigger: TTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| 3UTR CCA 90 bp | GATGCTGGAGCCACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATaGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCATCA | + |
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Preference number: 1 (lower is better) Translates to: DAGATILELCDRVLP*LCLLPLGQSRRRAS Trigger: TGATGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGTGGCTCCAGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| 3UTR TCA 90 bp | CCCAAGAGTCATCAAGGAAGCAGGGCAACGGGACCGCTCAGTCTTTaGTGCTGGAGCCACCATCTTAGAGCTCTGCGACCGTGTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: PKSHQGSRATGPLSL*CWSHHLRALRPCPA Trigger: GGCAGGACACGGTCGCAGAGCTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCGTTGCCCTGCTTCCTTGATGACTCTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| 3UTR CCA 72 bp | GCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTaGGGCAAAGTCGTAGAAGGGCATCAGGTAGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: ATVSCHGSASSH*GKVVEGHQVEK Trigger: CTTCTCTACCTGATGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| 3UTR CCA 72 bp | GCCACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATaGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGA | + |
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Preference number: 3 (lower is better) Translates to: ATILELCDRVLP*LCLLPLGQSRR Trigger: TCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| 3UTR GCA 72 bp | ATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTaGCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: ILELCDRVLPWL*LLPLGQSRRRA Trigger: TGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| 3UTR TCA 72 bp | CATCAAGGAAGCAGGGCAACGGGACCGCTCAGTCTTTaGTGCTGGAGCCACCATCTTAGAGCTCTGCGACCG | + |
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Preference number: 3 (lower is better) Translates to: HQGSRATGPLSL*CWSHHLRALRP Trigger: CGGTCGCAGAGCTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCGTTGCCCTGCTTCCTTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| 3UTR GCA 72 bp | TCAGTCTTTGATGCTGGAGCCACCATCTTAGAGCTCTaGGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SVFDAGATILEL*DRVLPWLCLLP Trigger: TGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGTGGCTCCAGCATCAAAGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| 3UTR TCA 72 bp | GTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAATaGTGGTCTCCCACTTTTATGAGTTTTTACAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: VEKNWITAVSPE*WSPTFMSFYKA Trigger: TGCCTTGTAAAAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| 3UTR TCA 72 bp | TCATTCCACGAGTCATCTTCATTTGAAAAGCTAAAATaGAAAGGTCTGACAATCCCAAGAGTCATCAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SFHESSSFEKLK*KGLTIPRVIKE Trigger: TTCCTTGATGACTCTTGGGATTGTCAGACCTTTTCATTTTAGCTTTTCAAATGAAGATGACTCGTGGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | GCTCTGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGCTCCCACAAGGAGGTTaGAGCTCTTGTGCCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: ALRPCPAMALPPPTGAKSLPQGG*SSCALL Trigger: AAGCAGGGCACAAGAGCTTCAACCTCCTTGTGGGAG...CGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | ACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGTGCATGCGGTTCTCCTaGCCCCCAGAGGGCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: TILELCDRVLPWLCLLPLCMRFS*PPEGLS Trigger: AGACAGGCCCTCTGGGGGTCAGGAGAACCGCATGCA...CAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | CGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCAGCCAGCTGGATGCTGTaGAAATCTGCGGCTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RVLPWLCLLPLGQSRRRAASWML*KSAAAP Trigger: GGGAGCAGCCGCAGATTTTCACAGCATCCAGCTGGC...TGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | CGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCACTAGTGGCAGGCAGGTaGAGCAGGTGTAGAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RVLPWLCLLPLGQSRRRALVAGR*SRCRAS Trigger: GGAAGCTCTACACCTGCTCCACCTGCCTGCCACTAG...TGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | TGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGATCACCTGGAGAGCTGTaGAGGCTTCGAGGTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: CDRVLPWLCLLPLGQSRRSPGEL*RLRGSH Trigger: GTGGGAACCTCGAAGCCTCCACAGCTCTCCAGGTGA...TCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | ACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGTGGTGGCCTCGACGGTaGGAATGTAGACAGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TVSCHGSASSHWGKVVEGWWPRR*ECRQKW Trigger: CCACTTCTGTCTACATTCTCACCGTCGAGGCCACCA...CCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | TGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCATCAGGTAAGTCCGGGGGAAGTCTaGATCGGTAGCTCGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: CHGSASSHWGKVVEGHQVSPGEV*IGSSHL Trigger: CAGGTGCGAGCTACCGATGCAGACTTCCCCCGGACT...TACCTGATGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | ACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGTGCTTCTCCAGCTGTaGCTCTGTGCTGGGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: TILELCDRVLPWLCLLPLVLLQL*LCAGYW Trigger: CCAGTACCCAGCACAGAGGCACAGCTGGAGAAGCAC...CAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | TGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAATACCCGAGGGGTATaGTCCGGCTTGTGTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: CDRVLPWLCLLPLGQSRRNTRGV*SGLCLL Trigger: CAGAAGACACAAGCCGGAGCATACCCCTCGGGTATT...TCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | GATGCTGGAGCCACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTGCGGCTGGACCCTCCTCTaGATACGGAATACACCACTG | + |
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Preference number: 4 (lower is better) Translates to: DAGATILELCDRVLPWLCGWTLL*IRNTPL Trigger: CAGTGGTGTATTCCGTATCCAGAGGAGGGTCCAGCC...GCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGTGGCTCCAGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | GCTCTGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTTCACAGAAAACTTGTaGACCAAAGTGGCAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: ALRPCPAMALPPPTGAKSFTENL*TKVAGG Trigger: TCCACCTGCCACTTTGGTGCACAAGTTTTCTGTGAA...CGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | GAAGCAGGGCAACGGGACCGCTCAGTCTTTGATGCTGGAGCCACCATCTTAGAGGATGCTGTGAAAATCTaGGGCTGCTCCCCGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EAGQRDRSVFDAGATILEDAVKI*GCSPLQ Trigger: CTGGAGCGGGGAGCAGCCGCAGATTTTCACAGCATC...CTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCGTTGCCCTGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | ACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGGCTCCCCGCTCCAGATaGCGTGGTAAAGTTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: TVSCHGSASSHWGKVVEGAPRSR*RGKVEF Trigger: AAATTCAACTTTACCACGCCATCTGGAGCGGGGAGC...CCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | AGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCGCTGTGCCTCTGTGCTaGGTACTGGGCTCGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: RASGREELDHRCEPRMMVAVPLC*VLGSGQ Trigger: TTGGCCCGAGCCCAGTACCCAGCACAGAGGCACAGC...GACCATCATTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | GTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAAGTGAAAATCTGCGGCTaGTCCCCGCTCCAGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: VVEGHQVEKNWITAVSPEVKICG*SPLQMA Trigger: CGCCATCTGGAGCGGGGAGCAGCCGCAGATTTTCAC...TTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCTTCTACGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | TGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAATCCAAAATATGTTTaGGTACTGGAGGCTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: CDRVLPWLCLLPLGQSRRNPKYV*VLEAGP Trigger: GGGTCCAGCCTCCAGTACCCAAACATATTTTGGATT...TCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | GATGCTGGAGCCACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTGCGGAGAGAAGGTGAAATaGTTGTTGATGTTGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: DAGATILELCDRVLPWLCGEKVK*LLMLPE Trigger: CTCAGGCAACATCAACAATCATTTCACCTTCTCTCC...GCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGTGGCTCCAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | CGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCAGAAGAGGGTGCCATTTaGAGACATTCTGAAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RVLPWLCLLPLGQSRRRAEEGAI*RHSEVL Trigger: AAGAACTTCAGAATGTCTGCAAATGGCACCCTCTTC...TGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | GAAGCAGGGCAACGGGACCGCTCAGTCTTTGATGCTGGAGCCACCATCTTAGAGGGAGGAGCAGCATCCTaGACTTGGATCATCACATTG | + |
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Preference number: 4 (lower is better) Translates to: EAGQRDRSVFDAGATILEGGAAS*TWIITL Trigger: CAATGTGATGATCCAAGTGCAGGATGCTGCTCCTCC...CTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCGTTGCCCTGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | GATGCTGGAGCCACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTGCAGCTGGTCTTCTTTCTaGCACATCAAACACGTACGA | + |
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Preference number: 4 (lower is better) Translates to: DAGATILELCDRVLPWLCSWSSF*HIKHVR Trigger: TCGTACGTGTTTGATGTGCCAGAAAGAAGACCAGCT...GCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGTGGCTCCAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | AGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCGGCCAATTCGGCAGCTaGGTTAATGGGCCTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RASGREELDHRCEPRMMVGQFGS*VNGPFH Trigger: GTGGAAAGGCCCATTAACCCAGCTGCCGAATTGGCC...GACCATCATTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | GATGCTGGAGCCACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTGCGAACTTCCAGAGAAATaGTGGGATTCTGTCTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: DAGATILELCDRVLPWLCELPEK*WDSVSV Trigger: AACTGAGACAGAATCCCATCATTTCTCTGGAAGTTC...GCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGTGGCTCCAGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | GCAGGGCAACGGGACCGCTCAGTCTTTGATGCTGGAGCCACCATCTTAGAGCTCCCACTGGGATGGCCATaGAGTAAAAATTTGGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: AGQRDRSVFDAGATILELPLGWP*SKNLEY Trigger: GTACTCCAAATTTTTACTTCATGGCCATCCCAGTGG...GAGCTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCGTTGCCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | TGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCATCAGGTACAGTGCACGTCAGCTTaGAATTCTGAATGTTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: CHGSASSHWGKVVEGHQVQCTSA*NSECLC Trigger: GCACAAACATTCAGAATTTCAAGCTGACGTGCACTG...TACCTGATGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | AGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCAACCTTGTGCCAGGATaGCTTGGAACTGAGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RASGREELDHRCEPRMMVNLVPG*LGTEEA Trigger: AGCCTCCTCAGTTCCAAGGCATCCTGGCACAAGGTT...GACCATCATTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | GTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAAACTTGTGCACCAAAGTaGCAGGTGGAGCGTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VVEGHQVEKNWITAVSPETCAPK*QVERSL Trigger: CAGAGAACGCTCCACCTGCCACTTTGGTGCACAAGT...TTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCTTCTACGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | TGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCATCAGGTAGCAGCATCCTGCACTTaGATCATCACATTGTACACA | + |
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Preference number: 4 (lower is better) Translates to: CHGSASSHWGKVVEGHQVAASCT*IITLYT Trigger: TGTGTACAATGTGATGATCCAAGTGCAGGATGCTGC...TACCTGATGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | ACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGAATGTAGACAGAAGTaGTTTCATGGTCTGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: TILELCDRVLPWLCLLPLECRQK*FHGLLE Trigger: CTCAAGCAGACCATGAAACCACTTCTGTCTACATTC...CAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | AGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCGTCTGTAGACTGCTTTaGACAGCAGCACCATCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RASGREELDHRCEPRMMVVCRLL*TAAPSG Trigger: CCCTGATGGTGCTGCTGTCCAAAGCAGTCTACAGAC...GACCATCATTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | GAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTCTCTGTGCTGGGTACTaGGCTCGGGCCAATTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: ELDHRCEPRMMVSHFYEFLCAGY*ARANSA Trigger: TGCCGAATTGGCCCGAGCCCAGTACCCAGCACAGAG...AAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTGATCCAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | GCAGGGCAACGGGACCGCTCAGTCTTTGATGCTGGAGCCACCATCTTAGAGCTCCATTTGCAGACATTCTaGAGTTCTTCGAGGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: AGQRDRSVFDAGATILELHLQTF*SSSREK Trigger: TTTCTCCCTCGAAGAACTTCAGAATGTCTGCAAATG...GAGCTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCGTTGCCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | CACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTTTACAAGGCAGGTGGAGCGTTCTCTaGCACGTTGCTAGTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HRCEPRMMVSHFYEFLQGRWSVL*HVASGR Trigger: CCTGCCACTAGCAACGTGGCAGAGAACGCTCCACCT...GCCTTGTAAAAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | TCCTCCCACTGGGGCAAAGTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCTTCACAATAGTCACCTaGAGAGCTGTGGAGGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SSHWGKVVEGHQVEKNWIFTIVT*RAVEAS Trigger: CGAAGCCTCCACAGCTCTCCAGGTGACTATTGTGAA...GATCCAGTTCTTCTCTACCTGATGCCCTTCTACGACTTTGCCCCAGTGGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | ACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGTTGAATTTGTTGTTTaGAGCTTCGCTGTCATCATC | + |
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Preference number: 4 (lower is better) Translates to: TILELCDRVLPWLCLLPLVEFVV*SFAVII Trigger: GATGATGACAGCGAAGCTCCAAACAACAAATTCAAC...CAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | GTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAACTCAAAGTTGGTTGCTaGCAGTCTGTTCACCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: VVEGHQVEKNWITAVSPELKVGC*QSVHPE Trigger: TTCAGGGTGAACAGACTGTCAGCAACCAACTTTGAG...TTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCTTCTACGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | TCCTCCCACTGGGGCAAAGTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCTTCACATCTGTCACCTaGACAGTCAGGACTTGCACA | + |
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Preference number: 4 (lower is better) Translates to: SSHWGKVVEGHQVEKNWIFTSVT*TVRTCT Trigger: TGTGCAAGTCCTGACTGTTCAGGTGACAGATGTGAA...GATCCAGTTCTTCTCTACCTGATGCCCTTCTACGACTTTGCCCCAGTGGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | TGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCATCAGGTACACCAGTTTTTGAGTTaGATTCATATATTTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: CHGSASSHWGKVVEGHQVHQFLS*IHIFPR Trigger: CCGGGGAAATATATGAATTCAACTCAAAAACTGGTG...TACCTGATGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | GTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAAAGGTTGAAGCTCTTGTaGCCTGCTTCAAAGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVEGHQVEKNWITAVSPERLKLL*PASKSS Trigger: ACTGGACTTTGAAGCAGGGCACAAGAGCTTCAACCT...TTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCTTCTACGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | GAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTCCAGAGCCAGCTGGATaGTGTGAAAATCTGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELDHRCEPRMMVSHFYEFPEPAG*CENLRL Trigger: CAGCCGCAGATTTTCACAGCATCCAGCTGGCTCTGG...AAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTGATCCAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | CACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTTTACAAGGCTCTTCGAGGGAGAAATaGGGAAATACCCGAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HRCEPRMMVSHFYEFLQGSSREK*GNTRGV Trigger: TACCCCTCGGGTATTTCCTCATTTCTCCCTCGAAGA...GCCTTGTAAAAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | GAAGCAGGGCAACGGGACCGCTCAGTCTTTGATGCTGGAGCCACCATCTTAGAGAATCTGCAAATCGAATaGTTTCGGTCCTCTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EAGQRDRSVFDAGATILENLQIE*FRSSFK Trigger: TTTGAAAGAGGACCGAAAGCATTCGATTTGCAGATT...CTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCGTTGCCCTGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | GAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTAATATGTTTGGGTACTaGAGGCTGGACCCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELDHRCEPRMMVSHFYEFNMFGY*RLDPPL Trigger: CAGAGGAGGGTCCAGCCTCCAGTACCCAAACATATT...AAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTGATCCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | GAAGCAGGGCAACGGGACCGCTCAGTCTTTGATGCTGGAGCCACCATCTTAGAGAATTCTGAATGTTTGTaGCAACTTTTAGATCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EAGQRDRSVFDAGATILENSECL*QLLDPL Trigger: CAGTGGATCTAAAAGTTGGCACAAACATTCAGAATT...CTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCGTTGCCCTGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | CACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTTTACAAGGCCCTTGGCTTTTGTGCTaGCAGACAGCAAGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRCEPRMMVSHFYEFLQGPWLLC*QTASCH Trigger: ATGACAACTTGCTGTCTGGCAGCACAAAAGCCAAGG...GCCTTGTAAAAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | AAAGTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCATGTGATGGTTGTGGTTaGGTGAGGAATGACTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVVEGHQVEKNWITAVSPCDGCG*VRNDFN Trigger: GTTAAAGTCATTCCTCACCCAACCACAACCATCACA...TGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCTTCTACGACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | GAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTATGGTTGTGGTTGGGTaGGGAATGACTTTAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: ELDHRCEPRMMVSHFYEFMVVVG*GMTLTL Trigger: GAGTGTTAAAGTCATTCCTCACCCAACCACAACCAT...AAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTGATCCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | GAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTGTCTTCTGGGTCAAATaGCTCCACCTGGTAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELDHRCEPRMMVSHFYEFVFWVK*LHLVNE Trigger: TTCATTTACCAGGTGGAGGCATTTGACCCAGAAGAC...AAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTGATCCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | CACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTTTACAAGGCGAGCTTTCTGCATGTTaGAGGGTTGTCATTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HRCEPRMMVSHFYEFLQGELSAC*RVVIDV Trigger: GACATCAATGACAACCCTGCAACATGCAGAAAGCTC...GCCTTGTAAAAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | GAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTAAGACAGAGTTCATCTaGATAGATTCCACCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELDHRCEPRMMVSHFYEFKTEFI*IDSTMA Trigger: GGCCATGGTGGAATCTATCCAGATGAACTCTGTCTT...AAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTGATCCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR GCA 90 bp | CGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTTTACAAGGCAAAGAAGCTCTTGTGCCCTaGTTCAAAGTCCAGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCEPRMMVSHFYEFLQGKEALVP*FKVQFC Trigger: ACAGAACTGGACTTTGAAGCAGGGCACAAGAGCTTC...TTTGCCTTGTAAAAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CCA 90 bp | TCCTCCCACTGGGGCAAAGTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCATTTGGAGTACATACTaGCTTTTCATCATTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSHWGKVVEGHQVEKNWIIWSTY*LFIIFS Trigger: GGAGAAAATGATGAAAAGCCAGTATGTACTCCAAAT...GATCCAGTTCTTCTCTACCTGATGCCCTTCTACGACTTTGCCCCAGTGGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | CACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTTTACAAGGCCCTGGCACCAGTTTTTaGGTTGAATTCATATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRCEPRMMVSHFYEFLQGPGTSF*VEFIYF Trigger: GAAATATATGAATTCAACTCAAAAACTGGTGCCAGG...GCCTTGTAAAAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR TCA 90 bp | CGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTTTACAAGGCAAAGTCAGCTTGAAATTCTaGATGTTTGTGCCAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RCEPRMMVSHFYEFLQGKVSLKF*MFVPTF Trigger: AAAAGTTGGCACAAACATTCAGAATTTCAAGCTGAC...TTTGCCTTGTAAAAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 90 bp | CTCCCTGTGTGTTTAGGGACTGGTGCTTCTCCAGCTGTGCCTCTGTaGTGGGTACTGGGCTCGGGCCAATTCGGCAGCTGGGTTAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPVCLGTGASPAVPL*WVLGSGQFGSWVNG Trigger: CCCATTAACCCAGCTGCCGAATTGGCCCGAGCCCAGTACCCAGCACAGAGGCACAGCTGGAGAAGCACCAGTCCCTAAACACACAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | GTGGCAGGTGGAGCGTTCTCTGCCACGTTGCTAGTGGCAGGCAGGTaGAGCAGGTGTAGAGCTTCCCCTCCTGAGGTGATCCCAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VAGGAFSATLLVAGR*SRCRASPPEVIPKR Trigger: TCTCTTTGGGATCACCTCAGGAGGGGAAGCTCTACACCTGCTCCACCTGCCTGCCACTAGCAACGTGGCAGAGAACGCTCCACCTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | TGGGTACTGGAGGCTGGACCCTCCTCTGGATACGGAATACACCACTaGAGTCCGGGGGAAGTCTGCATCGGTAGCTCGCACCTGCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: WVLEAGPSSGYGIHH*SPGEVCIGSSHLPN Trigger: ATTGGGCAGGTGCGAGCTACCGATGCAGACTTCCCCCGGACTCCAGTGGTGTATTCCGTATCCAGAGGAGGGTCCAGCCTCCAGTACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | CCTGTGTGTTTAGGGACTGGTGCTTCTCCAGCTGTGCCTCTGTGCTaGGTACTGGGCTCGGGCCAATTCGGCAGCTGGGTTAATGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVCLGTGASPAVPLC*VLGSGQFGSWVNGP Trigger: AGGCCCATTAACCCAGCTGCCGAATTGGCCCGAGCCCAGTACCCAGCACAGAGGCACAGCTGGAGAAGCACCAGTCCCTAAACACACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 90 bp | CCCTCCTCTGGATACGGAATACACCACTGGAGTCCGGGGGAAGTCTaGATCGGTAGCTCGCACCTGCCCAATCTGGGTTCTAGCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSGYGIHHWSPGEV*IGSSHLPNLGSSWS Trigger: AGACCAGCTAGAACCCAGATTGGGCAGGTGCGAGCTACCGATGCAGACTTCCCCCGGACTCCAGTGGTGTATTCCGTATCCAGAGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | GCTGTGCCTCTGTGCTGGGTACTGGGCTCGGGCCAATTCGGCAGCTaGGTTAATGGGCCTTTCCACCTCCTGGCACCAGTTTTTGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AVPLCWVLGSGQFGS*VNGPFHLLAPVFEL Trigger: CAACTCAAAAACTGGTGCCAGGAGGTGGAAAGGCCCATTAACCCAGCTGCCGAATTGGCCCGAGCCCAGTACCCAGCACAGAGGCACAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | GCAGGGCAACGGGACCGCTCAGTCTTTGATGCTGGAGCCACCATCTTAGAGCTCGTGAAGGGCCTTGGGTaGACTACCAAGGGAAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGQRDRSVFDAGATILELVKGLG*TTKGNP Trigger: AGGGTTTCCCTTGGTAGTCAACCCAAGGCCCTTCAC...GAGCTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCGTTGCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | AGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCAGCAGGCGCGTGATGTaGGAGCCGGCATTGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RASGREELDHRCEPRMMVSRRVM*EPALGE Trigger: CTCTCCCAATGCCGGCTCCAACATCACGCGCCTGCT...GACCATCATTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | CGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCACTGCATGTTGCAGGGTaGTCATTGATGTCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RVLPWLCLLPLGQSRRRALHVAG*SLMSST Trigger: TGTGGAAGACATCAATGACAACCCTGCAACATGCAG...TGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | ACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGTTTCAACAAGAGCCTaGGCTTTTGTGCTGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TILELCDRVLPWLCLLPLVSTRA*AFVLPD Trigger: GTCTGGCAGCACAAAAGCCAAGGCTCTTGTTGAAAC...CAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 90 bp | AGGTTTCCTGTCCCTCCTGGTCGTAGAGGAGCAATGTCTGTAGACTaGTTTGGACAGCAGCACCATCAGGGACCCCAGAAGGCCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RFPVPPGRRGAMSVD*FGQQHHQGPQKAKK Trigger: CTTCTTGGCCTTCTGGGGTCCCTGATGGTGCTGCTGTCCAAAGCAGTCTACAGACATTGCTCCTCTACGACCAGGAGGGACAGGAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | GGAGTCCGGGGGAAGTCTGCATCGGTAGCTCGCACCTGCCCAATCTaGGTTCTAGCTGGTCTTCTTTCTGGCACATCAAACACGTACGAT | + |
|
Preference number: 5 (lower is better) Translates to: GVRGKSASVARTCPI*VLAGLLSGTSNTYD Trigger: ATCGTACGTGTTTGATGTGCCAGAAAGAAGACCAGCTAGAACCCAGATTGGGCAGGTGCGAGCTACCGATGCAGACTTCCCCCGGACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | GAAGCAGGGCAACGGGACCGCTCAGTCTTTGATGCTGGAGCCACCATCTTAGAGCTGAACAGTCAGGACTaGCACATCTGTGACACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: EAGQRDRSVFDAGATILELNSQD*HICDTD Trigger: GTCGGTGTCACAGATGTGCAAGTCCTGACTGTTCAG...CTCTAAGATGGTGGCTCCAGCATCAAAGACTGAGCGGTCCCGTTGCCCTGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS TCA 90 bp | CCTGACCCCCAGAGGGCCTGTCTCTCACTCGAACTTCCAGAGAAATaGTGGGATTCTGTCTCAGTTCGCCTGCATCTCGATCTAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PDPQRACLSLELPEK*WDSVSVRLHLDLAF Trigger: GAAGGCTAGATCGAGATGCAGGCGAACTGAGACAGAATCCCATCATTTCTCTGGAAGTTCGAGTGAGAGACAGGCCCTCTGGGGGTCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | CGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGGGGCAAAGTCGTAGAAGGGCAAAATTCACAGAAAACTaGTGCACCAAAGTGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RVLPWLCLLPLGQSRRRAKFTEN*CTKVAG Trigger: ACCTGCCACTTTGGTGCACAAGTTTTCTGTGAATTT...TGCCCTTCTACGACTTTGCCCCAGTGGGAGGAGGCAGAGCCATGGCAGGACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | TCCTCCCACTGGGGCAAAGTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCTTCGGGCCACTTGGATaGTCCCTGTCAGCTGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SSHWGKVVEGHQVEKNWIFGPLG*SLSAGL Trigger: TAGACCAGCTGACAGGGACAATCCAAGTGGCCCGAA...GATCCAGTTCTTCTCTACCTGATGCCCTTCTACGACTTTGCCCCAGTGGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | ACCATCTTAGAGCTCTGCGACCGTGTCCTGCCATGGCTCTGCCTCCTCCCACTGTTGTGTCTCTTTTCTTaGTCAGAGGTTTCCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TILELCDRVLPWLCLLPLLCLFS*SEVSCP Trigger: GGGACAGGAAACCTCTGACAAAGAAAAGAGACACAA...CAGTGGGAGGAGGCAGAGCCATGGCAGGACACGGTCGCAGAGCTCTAAGATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | CTGGTAAAGCGCGGGGTCTCATCATTGATGTTCACAATAGTCACCTaGAGAGCTGTGGAGGCTTCGAGGTTCCCACTGTCTCTTACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVKRGVSSLMFTIVT*RAVEASRFPLSLTP Trigger: GGGAGTAAGAGACAGTGGGAACCTCGAAGCCTCCACAGCTCTCCAGGTGACTATTGTGAACATCAATGATGAGACCCCGCGCTTTACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | AAAGTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGGGGTATGCTCCGGCTaGTGTCTTCTGGGTCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: KVVEGHQVEKNWITAVSPGVCSG*CLLGQM Trigger: CATTTGACCCAGAAGACACAAGCCGGAGCATACCCC...TGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCTTCTACGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS TCA 90 bp | AGCAGGCGCGTGATGTTGGAGCCGGCATTGGGAGAGAAGGTGAAATaGTTGTTGATGTTGCCTGAGCCAATGGAGTATCGAAAAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SRRVMLEPALGEKVK*LLMLPEPMEYRKEL Trigger: CAGTTCTTTTCGATACTCCATTGGCTCAGGCAACATCAACAATCATTTCACCTTCTCTCCCAATGCCGGCTCCAACATCACGCGCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | GGTAGCTCGCACCTGCCCAATCTGGGTTCTAGCTGGTCTTCTTTCTaGCACATCAAACACGTACGATGGCCTTTCAAAGATGAGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSSHLPNLGSSWSSF*HIKHVRWPFKDERK Trigger: TTTCCTCTCATCTTTGAAAGGCCATCGTACGTGTTTGATGTGCCAGAAAGAAGACCAGCTAGAACCCAGATTGGGCAGGTGCGAGCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | TGGAGTTCTCCTGTCTTGGGGTTAATCCAAAATATGTTTGGGTACTaGAGGCTGGACCCTCCTCTGGATACGGAATACACCACTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WSSPVLGLIQNMFGY*RLDPPLDTEYTTGV Trigger: GACTCCAGTGGTGTATTCCGTATCCAGAGGAGGGTCCAGCCTCCAGTACCCAAACATATTTTGGATTAACCCCAAGACAGGAGAACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | GATCTGGTAGGTAATCCTGGGCCTGGGAGTTGTGATGGTTGTGGTTaGGTGAGGAATGACTTTAACACTCAGAGTCACTGTCCCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLVGNPGPGSCDGCG*VRNDFNTQSHCPCF Trigger: GAAACAGGGACAGTGACTCTGAGTGTTAAAGTCATTCCTCACCCAACCACAACCATCACAACTCCCAGGCCCAGGATTACCTACCAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | GTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCAGAAGTTGCAGGGTTGTCATaGATGTCTTCCACAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VVEGHQVEKNWITAVSPEVAGLS*MSSTMK Trigger: CTTCATTGTGGAAGACATCAATGACAACCCTGCAAC...TTCTGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCTTCTACGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS TCA 90 bp | GCTGGGTTAATGGGCCTTTCCACCTCCTGGCACCAGTTTTTGAGTTaGATTCATATATTTCCCCGGTCACTGGATCTACGGCTTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AGLMGLSTSWHQFLS*IHIFPRSLDLRLLH Trigger: ATGGAGAAGCCGTAGATCCAGTGACCGGGGAAATATATGAATTCAACTCAAAAACTGGTGCCAGGAGGTGGAAAGGCCCATTAACCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 90 bp | GGGATCACAGGTGACAACGATACTGATAAATTCACAGAAAACTTGTaGACCAAAGTGGCAGGTGGAGCGTTCTCTGCCACGTTGCTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GITGDNDTDKFTENL*TKVAGGAFSATLLV Trigger: CACTAGCAACGTGGCAGAGAACGCTCCACCTGCCACTTTGGTGCACAAGTTTTCTGTGAATTTATCAGTATCGTTGTCACCTGTGATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 90 bp | GAAATACCCGAGGGGTATGCTCCGGCTTGTGTCTTCTGGGTCAAATaGCTCCACCTGGTAAATGAATCCAGGGTTTGTTCTTTCTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: EIPEGYAPACVFWVK*LHLVNESRVCSFYD Trigger: GTCATAGAAAGAACAAACCCTGGATTCATTTACCAGGTGGAGGCATTTGACCCAGAAGACACAAGCCGGAGCATACCCCTCGGGTATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | AGAAATGAGGAAATACCCGAGGGGTATGCTCCGGCTTGTGTCTTCTaGGTCAAATGCCTCCACCTGGTAAATGAATCCAGGGTTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RNEEIPEGYAPACVF*VKCLHLVNESRVCS Trigger: AGAACAAACCCTGGATTCATTTACCAGGTGGAGGCATTTGACCCAGAAGACACAAGCCGGAGCATACCCCTCGGGTATTTCCTCATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | GCTGCTCCCCGCTCCAGATGGCGTGGTAAAGTTGAATTTGTTGTTTaGAGCTTCGCTGTCATCATCAAAGCAGAACTTGTTCAGGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AAPRSRWRGKVEFVV*SFAVIIKAELVQVQ Trigger: TTGGACCTGAACAAGTTCTGCTTTGATGATGACAGCGAAGCTCCAAACAACAAATTCAACTTTACCACGCCATCTGGAGCGGGGAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | GAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTAAAAGCAACGTCCCGTaGGCTGTTCTTTCAGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ELDHRCEPRMMVSHFYEFKSNVP*AVLSGN Trigger: GTTGCCTGAAAGAACAGCCAACGGGACGTTGCTTTT...AAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTGATCCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 90 bp | CCCTGCTTCAAAGTCCAGTTCTGTGGTAGAGAAGAGGGTGCCATTTaGAGACATTCTGAAGTTCTTCGAGGGAGAAATGAGGAAATACCC | + |
|
Preference number: 5 (lower is better) Translates to: PCFKVQFCGREEGAI*RHSEVLRGRNEEIP Trigger: GGGTATTTCCTCATTTCTCCCTCGAAGAACTTCAGAATGTCTGCAAATGGCACCCTCTTCTCTACCACAGAACTGGACTTTGAAGCAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | AAAGTCGTAGAAGGGCATCAGGTAGAGAAGAACTGGATCACCGCTGTGAGCCCATGGAGTTCTCCTGTCTaGGGGTTAATCCAAAATATG | + |
|
Preference number: 5 (lower is better) Translates to: KVVEGHQVEKNWITAVSPWSSPV*GLIQNM Trigger: CATATTTTGGATTAACCCCAAGACAGGAGAACTCCA...TGGGCTCACAGCGGTGATCCAGTTCTTCTCTACCTGATGCCCTTCTACGACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 90 bp | CCGGTCACTGGATCTACGGCTTCTCCATCAAAGACAGAGTTCATCTaGATAGATTCCACCATGGCCTCTCTATTCATTCTTTTTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVTGSTASPSKTEFI*IDSTMASLFILFVS Trigger: AGACACAAAAAGAATGAATAGAGAGGCCATGGTGGAATCTATCCAGATGAACTCTGTCTTTGATGGAGAAGCCGTAGATCCAGTGACCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | GAACTGGATCACCGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTGCACCAGTTTTTGAGTaGAATTCATATATTTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ELDHRCEPRMMVSHFYEFAPVFE*NSYISP Trigger: CGGGGAAATATATGAATTCAACTCAAAAACTGGTGC...AAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCGGTGATCCAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS-3UTR CAA 90 bp | CGCTGTGAGCCCAGAATGATGGTCTCCCACTTTTATGAGTTTTTACAAGGCAAAGATGGCGTGGTAAAGTaGAATTTGTTGTTTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCEPRMMVSHFYEFLQGKDGVVK*NLLFGA Trigger: AGCTCCAAACAACAAATTCAACTTTACCACGCCATC...TTTGCCTTGTAAAAACTCATAAAAGTGGGAGACCATCATTCTGGGCTCACAGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 72 bp | GGACAAGCAGCTGGTAGTCCCAGACGGTATCGAGGCTaGTGTAGTCAAAGCGGGAAGCCAGCAGCAGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GQAAGSPRRYRG*CSQSGKPAAGA Trigger: CGCGCCTGCTGCTGGCTTCCCGCTTTGACTACAGCAGCCTCGATACCGTCTGGGACTACCAGCTGCTTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | GGAGCGTTCTCTGCCACGTTGCTAGTGGCAGGCAGGTaGAGCAGGTGTAGAGCTTCCCCTCCTGAGGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: GAFSATLLVAGR*SRCRASPPEVI Trigger: GATCACCTCAGGAGGGGAAGCTCTACACCTGCTCCACCTGCCTGCCACTAGCAACGTGGCAGAGAACGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | GAGGCTGGACCCTCCTCTGGATACGGAATACACCACTaGAGTCCGGGGGAAGTCTGCATCGGTAGCTCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: EAGPSSGYGIHH*SPGEVCIGSSH Trigger: GTGCGAGCTACCGATGCAGACTTCCCCCGGACTCCAGTGGTGTATTCCGTATCCAGAGGAGGGTCCAGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | CTGTGCTGGGTACTGGGCTCGGGCCAATTCGGCAGCTaGGTTAATGGGCCTTTCCACCTCCTGGCACCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LCWVLGSGQFGS*VNGPFHLLAPV Trigger: AACTGGTGCCAGGAGGTGGAAAGGCCCATTAACCCAGCTGCCGAATTGGCCCGAGCCCAGTACCCAGCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
||
| CDS GCA 72 bp | GGAGTCCGGGGGAAGTCTGCATCGGTAGCTCGCACCTaGCCAATCTGGGTTCTAGCTGGTCTTCTTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GVRGKSASVART*PIWVLAGLLSG Trigger: GCCAGAAAGAAGACCAGCTAGAACCCAGATTGGGCAGGTGCGAGCTACCGATGCAGACTTCCCCCGGACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | TGCACCAAAGTGGCAGGTGGAGCGTTCTCTGCCACGTaGCTAGTGGCAGGCAGGTGGAGCAGGTGTAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CTKVAGGAFSAT*LVAGRWSRCRA Trigger: AGCTCTACACCTGCTCCACCTGCCTGCCACTAGCAACGTGGCAGAGAACGCTCCACCTGCCACTTTGGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | GAAAACTTGTGCACCAAAGTGGCAGGTGGAGCGTTCTCTGCCACGTaGCTAGTGGCAGGCAGGTGGAGCAGGTGTAGAGCTTCCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ENLCTKVAGGAFSAT*LVAGRWSRCRASPP Trigger: AGGAGGGGAAGCTCTACACCTGCTCCACCTGCCTGCCACTAGCAACGTGGCAGAGAACGCTCCACCTGCCACTTTGGTGCACAAGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 72 bp | AAACTTGTGCACCAAAGTGGCAGGTGGAGCGTTCTCTaGCACGTTGCTAGTGGCAGGCAGGTGGAGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KLVHQSGRWSVL*HVASGRQVEQV Trigger: CACCTGCTCCACCTGCCTGCCACTAGCAACGTGGCAGAGAACGCTCCACCTGCCACTTTGGTGCACAAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
||
| CDS GCA 72 bp | GGATACGGAATACACCACTGGAGTCCGGGGGAAGTCTaGATCGGTAGCTCGCACCTGCCCAATCTGGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GYGIHHWSPGEV*IGSSHLPNLGS Trigger: AGAACCCAGATTGGGCAGGTGCGAGCTACCGATGCAGACTTCCCCCGGACTCCAGTGGTGTATTCCGTATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | CAGTCTGTTCACCCTGAAGGCCTCCGTGAAGGGCCTTaGGTTGACTACCAAGGGAAACCCTGGGATCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: QSVHPEGLREGP*VDYQGKPWDHR Trigger: CCTGTGATCCCAGGGTTTCCCTTGGTAGTCAACCCAAGGCCCTTCACGGAGGCCTTCAGGGTGAACAGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | CTGTTCACCCTGAAGGCCTCCGTGAAGGGCCTTGGGTaGACTACCAAGGGAAACCCTGGGATCACAGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LFTLKASVKGLG*TTKGNPGITGD Trigger: GTCACCTGTGATCCCAGGGTTTCCCTTGGTAGTCAACCCAAGGCCCTTCACGGAGGCCTTCAGGGTGAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS TCA 72 bp | AGTCAACACAATTCTCCCAGAGCCAGCTGGATGCTGTaGAAATCTGCGGCTGCTCCCCGCTCCAGATGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SQHNSPRASWML*KSAAAPRSRWR Trigger: ACGCCATCTGGAGCGGGGAGCAGCCGCAGATTTTCACAGCATCCAGCTGGCTCTGGGAGAATTGTGTTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 72 bp | GTCCCTCCTGGTCGTAGAGGAGCAATGTCTGTAGACTaGTTTGGACAGCAGCACCATCAGGGACCCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VPPGRRGAMSVD*FGQQHHQGPQK Trigger: CTTCTGGGGTCCCTGATGGTGCTGCTGTCCAAAGCAGTCTACAGACATTGCTCCTCTACGACCAGGAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | GCTGACAGTCTGTTCACCCTGAAGGCCTCCGTGAAGGGCCTTGGGTaGACTACCAAGGGAAACCCTGGGATCACAGGTGACAACGATACT | + |
|
Preference number: 6 (lower is better) Translates to: ADSLFTLKASVKGLG*TTKGNPGITGDNDT Trigger: AGTATCGTTGTCACCTGTGATCCCAGGGTTTCCCTTGGTAGTCAACCCAAGGCCCTTCACGGAGGCCTTCAGGGTGAACAGACTGTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 72 bp | TCACCAGTCAACACAATTCTCCCAGAGCCAGCTGGATaGTGTGAAAATCTGCGGCTGCTCCCCGCTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SPVNTILPEPAG*CENLRLLPAPD Trigger: ATCTGGAGCGGGGAGCAGCCGCAGATTTTCACAGCATCCAGCTGGCTCTGGGAGAATTGTGTTGACTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | ACAGAGTACACTCTCCTGGGGCTGGTAAAGCGCGGGGTCTCATCATaGATGTTCACAATAGTCACCTGGAGAGCTGTGGAGGCTTCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TEYTLLGLVKRGVSS*MFTIVTWRAVEASR Trigger: CCTCGAAGCCTCCACAGCTCTCCAGGTGACTATTGTGAACATCAATGATGAGACCCCGCGCTTTACCAGCCCCAGGAGAGTGTACTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS TCA 72 bp | TCTTCCACAATGAAGGTTATCTGCATGCGGTTCTCCTaGCCCCCAGAGGGCCTGTCTCTCACTCGAACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSTMKVICMRFS*PPEGLSLTRTS Trigger: GGAAGTTCGAGTGAGAGACAGGCCCTCTGGGGGTCAGGAGAACCGCATGCAGATAACCTTCATTGTGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | CGCGGGGTCTCATCATTGATGTTCACAATAGTCACCTaGAGAGCTGTGGAGGCTTCGAGGTTCCCACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RGVSSLMFTIVT*RAVEASRFPLS Trigger: AGACAGTGGGAACCTCGAAGCCTCCACAGCTCTCCAGGTGACTATTGTGAACATCAATGATGAGACCCCGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | ACTCTCCTGGGGCTGGTAAAGCGCGGGGTCTCATCATaGATGTTCACAATAGTCACCTGGAGAGCTGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TLLGLVKRGVSS*MFTIVTWRAVE Trigger: CTCCACAGCTCTCCAGGTGACTATTGTGAACATCAATGATGAGACCCCGCGCTTTACCAGCCCCAGGAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS TCA 72 bp | ATCATTTTCTCCAAGGATGTTCACAGTAACAGTGACTaGGCTCCTGTCCTCGCCGTTGGTGGCCTCGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: IIFSKDVHSNSD*APVLAVGGLDG Trigger: ACCGTCGAGGCCACCAACGGCGAGGACAGGAGCTCAGTCACTGTTACTGTGAACATCCTTGGAGAAAATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | GAAATACCCGAGGGGTATGCTCCGGCTTGTGTCTTCTaGGTCAAATGCCTCCACCTGGTAAATGAATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EIPEGYAPACVF*VKCLHLVNESR Trigger: CCTGGATTCATTTACCAGGTGGAGGCATTTGACCCAGAAGACACAAGCCGGAGCATACCCCTCGGGTATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | ATCGGTAGCTCGCACCTGCCCAATCTGGGTTCTAGCTaGTCTTCTTTCTGGCACATCAAACACGTACGATGG | + |
|
Preference number: 6 (lower is better) Translates to: IGSSHLPNLGSS*SSFWHIKHVRW Trigger: CCATCGTACGTGTTTGATGTGCCAGAAAGAAGACCAGCTAGAACCCAGATTGGGCAGGTGCGAGCTACCGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | AAAATATGTTTGGGTACTGGAGGCTGGACCCTCCTCTaGATACGGAATACACCACTGGAGTCCGGGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: KICLGTGGWTLL*IRNTPLESGGS Trigger: ACTTCCCCCGGACTCCAGTGGTGTATTCCGTATCCAGAGGAGGGTCCAGCCTCCAGTACCCAAACATATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | CTGCGGCTGCTCCCCGCTCCAGATGGCGTGGTAAAGTTGAATTTGTaGTTTGGAGCTTCGCTGTCATCATCAAAGCAGAACTTGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LRLLPAPDGVVKLNL*FGASLSSSKQNLFR Trigger: CCTGAACAAGTTCTGCTTTGATGATGACAGCGAAGCTCCAAACAACAAATTCAACTTTACCACGCCATCTGGAGCGGGGAGCAGCCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 72 bp | GAGGGGTATGCTCCGGCTTGTGTCTTCTGGGTCAAATaGCTCCACCTGGTAAATGAATCCAGGGTTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EGYAPACVFWVK*LHLVNESRVCS Trigger: AGAACAAACCCTGGATTCATTTACCAGGTGGAGGCATTTGACCCAGAAGACACAAGCCGGAGCATACCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 72 bp | TATGGATCCCAGAGTGACGATGAACGGCACATACCATaGAGATGTGGAGTACACGTTTTCCCTGCGGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: YGSQSDDERHIP*RCGVHVFPADL Trigger: CAGATCCGCAGGGAAAACGTGTACTCCACATCTGCATGGTATGTGCCGTTCATCGTCACTCTGGGATCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | TCGAGGTTCCCACTGTCTCTTACTCCCACAAGGAGGTaGAAGCTCTTGTGCCCTGCTTCAAAGTCCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRFPLSLTPTRR*KLLCPASKSSS Trigger: AGAACTGGACTTTGAAGCAGGGCACAAGAGCTTCAACCTCCTTGTGGGAGTAAGAGACAGTGGGAACCTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 72 bp | CTGTCTCTTACTCCCACAAGGAGGTTGAAGCTCTTGTaGCCTGCTTCAAAGTCCAGTTCTGTGGTAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSLTPTRRLKLL*PASKSSSVVEK Trigger: CTTCTCTACCACAGAACTGGACTTTGAAGCAGGGCACAAGAGCTTCAACCTCCTTGTGGGAGTAAGAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | CCTGTCTTGGGGTTAATCCAAAATATGTTTGGGTACTaGAGGCTGGACCCTCCTCTGGATACGGAATACACC | + |
|
Preference number: 6 (lower is better) Translates to: PVLGLIQNMFGY*RLDPPLDTEYT Trigger: GGTGTATTCCGTATCCAGAGGAGGGTCCAGCCTCCAGTACCCAAACATATTTTGGATTAACCCCAAGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | GAGTTCTCCTGTCTTGGGGTTAATCCAAAATATGTTTaGGTACTGGAGGCTGGACCCTCCTCTGGATACGGA | + |
|
Preference number: 6 (lower is better) Translates to: EFSCLGVNPKYV*VLEAGPSSGYG Trigger: TCCGTATCCAGAGGAGGGTCCAGCCTCCAGTACCCAAACATATTTTGGATTAACCCCAAGACAGGAGAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | CACTCAGAGTCACTGTCCCTGTTTCAACAAGAGCCTTaGCTTTTGTGCTGCCAGACAGCAAGTTGTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: HSESLSLFQQEP*LLCCQTASCHQ Trigger: CTGATGACAACTTGCTGTCTGGCAGCACAAAAGCCAAGGCTCTTGTTGAAACAGGGACAGTGACTCTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | GGTAATCCTGGGCCTGGGAGTTGTGATGGTTGTGGTTaGGTGAGGAATGACTTTAACACTCAGAGTCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: GNPGPGSCDGCG*VRNDFNTQSHC Trigger: ACAGTGACTCTGAGTGTTAAAGTCATTCCTCACCCAACCACAACCATCACAACTCCCAGGCCCAGGATTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | CTGCTCCCCGCTCCAGATGGCGTGGTAAAGTTGAATTaGTTGTTTGGAGCTTCGCTGTCATCATCAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPAPDGVVKLN*LFGASLSSSKQ Trigger: CTGCTTTGATGATGACAGCGAAGCTCCAAACAACAAATTCAACTTTACCACGCCATCTGGAGCGGGGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | CCTGGGATCACAGGTGACAACGATACTGATAAATTCACAGAAAACTaGTGCACCAAAGTGGCAGGTGGAGCGTTCTCTGCCACGTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PGITGDNDTDKFTEN*CTKVAGGAFSATLL Trigger: TAGCAACGTGGCAGAGAACGCTCCACCTGCCACTTTGGTGCACAAGTTTTCTGTGAATTTATCAGTATCGTTGTCACCTGTGATCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | AATCTGCGGCTGCTCCCCGCTCCAGATGGCGTGGTAAAGTTGAATTaGTTGTTTGGAGCTTCGCTGTCATCATCAAAGCAGAACTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: NLRLLPAPDGVVKLN*LFGASLSSSKQNLF Trigger: GAACAAGTTCTGCTTTGATGATGACAGCGAAGCTCCAAACAACAAATTCAACTTTACCACGCCATCTGGAGCGGGGAGCAGCCGCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | AGCTGGGTTAATGGGCCTTTCCACCTCCTGGCACCAGTTTTTGAGTaGAATTCATATATTTCCCCGGTCACTGGATCTACGGCTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SWVNGPFHLLAPVFE*NSYISPVTGSTASP Trigger: TGGAGAAGCCGTAGATCCAGTGACCGGGGAAATATATGAATTCAACTCAAAAACTGGTGCCAGGAGGTGGAAAGGCCCATTAACCCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS TCA 72 bp | GTGATGTTGGAGCCGGCATTGGGAGAGAAGGTGAAATaGTTGTTGATGTTGCCTGAGCCAATGGAGTATCGA | + |
|
Preference number: 6 (lower is better) Translates to: VMLEPALGEKVK*LLMLPEPMEYR Trigger: TCGATACTCCATTGGCTCAGGCAACATCAACAATCATTTCACCTTCTCTCCCAATGCCGGCTCCAACATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS TCA 72 bp | ATGGGCCTTTCCACCTCCTGGCACCAGTTTTTGAGTTaGATTCATATATTTCCCCGGTCACTGGATCTACGG | + |
|
Preference number: 6 (lower is better) Translates to: MGLSTSWHQFLS*IHIFPRSLDLR Trigger: CCGTAGATCCAGTGACCGGGGAAATATATGAATTCAACTCAAAAACTGGTGCCAGGAGGTGGAAAGGCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 72 bp | GGTGACAACGATACTGATAAATTCACAGAAAACTTGTaGACCAAAGTGGCAGGTGGAGCGTTCTCTGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: GDNDTDKFTENL*TKVAGGAFSAT Trigger: CGTGGCAGAGAACGCTCCACCTGCCACTTTGGTGCACAAGTTTTCTGTGAATTTATCAGTATCGTTGTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
||
| CDS CAA 72 bp | CTCCCCGCTCCAGATGGCGTGGTAAAGTTGAATTTGTaGTTTGGAGCTTCGCTGTCATCATCAAAGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPAPDGVVKLNL*FGASLSSSKQN Trigger: GTTCTGCTTTGATGATGACAGCGAAGCTCCAAACAACAAATTCAACTTTACCACGCCATCTGGAGCGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | ACACTCAGAGTCACTGTCCCTGTTTCAACAAGAGCCTaGGCTTTTGTGCTGCCAGACAGCAAGTTGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: TLRVTVPVSTRA*AFVLPDSKLSS Trigger: TGATGACAACTTGCTGTCTGGCAGCACAAAAGCCAAGGCTCTTGTTGAAACAGGGACAGTGACTCTGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | GAACTGAGGAGGCTCGTTCACATCTGTCACCTGAACAGTCAGGACTaGCACATCTGTGACACCGACATCATCCTTAACGTAAATCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ELRRLVHICHLNSQD*HICDTDIILNVNLQ Trigger: TTGCAGATTTACGTTAAGGATGATGTCGGTGTCACAGATGTGCAAGTCCTGACTGTTCAGGTGACAGATGTGAACGAGCCTCCTCAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | ACAGGTGACAACGATACTGATAAATTCACAGAAAACTaGTGCACCAAAGTGGCAGGTGGAGCGTTCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TGDNDTDKFTEN*CTKVAGGAFSA Trigger: GGCAGAGAACGCTCCACCTGCCACTTTGGTGCACAAGTTTTCTGTGAATTTATCAGTATCGTTGTCACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | AATGGGCCTTTCCACCTCCTGGCACCAGTTTTTGAGTaGAATTCATATATTTCCCCGGTCACTGGATCTACG | + |
|
Preference number: 6 (lower is better) Translates to: NGPFHLLAPVFE*NSYISPVTGST Trigger: CGTAGATCCAGTGACCGGGGAAATATATGAATTCAACTCAAAAACTGGTGCCAGGAGGTGGAAAGGCCCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | ATGACTTTAACACTCAGAGTCACTGTCCCTGTTTCAACAAGAGCCTaGGCTTTTGTGCTGCCAGACAGCAAGTTGTCATCAGTAATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MTLTLRVTVPVSTRA*AFVLPDSKLSSVMW Trigger: CCACATTACTGATGACAACTTGCTGTCTGGCAGCACAAAAGCCAAGGCTCTTGTTGAAACAGGGACAGTGACTCTGAGTGTTAAAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS GCA 72 bp | AAAGTCCAGTTCTGTGGTAGAGAAGAGGGTGCCATTTaGAGACATTCTGAAGTTCTTCGAGGGAGAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: KVQFCGREEGAI*RHSEVLRGRNE Trigger: CTCATTTCTCCCTCGAAGAACTTCAGAATGTCTGCAAATGGCACCCTCTTCTCTACCACAGAACTGGACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | AAGCAGAACTTGTTCAGGTCCAAAAGCAACGTCCCGTaGGCTGTTCTTTCAGGCAACATAATGCTGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: KQNLFRSKSNVP*AVLSGNIMLKV Trigger: CACTTTCAGCATTATGTTGCCTGAAAGAACAGCCAACGGGACGTTGCTTTTGGACCTGAACAAGTTCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | TATGGAGGAGCAGCATCCTGCACTTGGATCATCACATaGTACACATTGCCAACTGCAAGGTTGCTTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: YGGAASCTWIIT*YTLPTARLLGF Trigger: AAATCCAAGCAACCTTGCAGTTGGCAATGTGTACAATGTGATGATCCAAGTGCAGGATGCTGCTCCTCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | TCATCATCAAAGCAGAACTTGTTCAGGTCCAAAAGCAACGTCCCGTaGGCTGTTCTTTCAGGCAACATAATGCTGAAAGTGAGCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSKQNLFRSKSNVP*AVLSGNIMLKVSFL Trigger: CAGAAAGCTCACTTTCAGCATTATGTTGCCTGAAAGAACAGCCAACGGGACGTTGCTTTTGGACCTGAACAAGTTCTGCTTTGATGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS TCA 72 bp | ATTGGGAGAGAAGGTGAAATGATTGTTGATGTTGCCTaGGCCAATGGAGTATCGAAAAGAACTGGGGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: IGREGEMIVDVA*ANGVSKRTGAR Trigger: TCTAGCCCCAGTTCTTTTCGATACTCCATTGGCTCAGGCAACATCAACAATCATTTCACCTTCTCTCCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | CGCTCCAGATGGCGTGGTAAAGTTGAATTTGTTGTTTaGAGCTTCGCTGTCATCATCAAAGCAGAACTTGTT | + |
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Preference number: 6 (lower is better) Translates to: RSRWRGKVEFVV*SFAVIIKAELV Trigger: AACAAGTTCTGCTTTGATGATGACAGCGAAGCTCCAAACAACAAATTCAACTTTACCACGCCATCTGGAGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CCA 72 bp | GGATCTACGGCTTCTCCATCAAAGACAGAGTTCATCTaGATAGATTCCACCATGGCCTCTCTATTCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: GSTASPSKTEFI*IDSTMASLFIL Trigger: AAGAATGAATAGAGAGGCCATGGTGGAATCTATCCAGATGAACTCTGTCTTTGATGGAGAAGCCGTAGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 90 bp | GCACTTGGATCATCACATTGTACACATTGCCAACTGCAAGGTTGCTaGGATTTTCATAGTCTAGATCACCAGTCAACACAATTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ALGSSHCTHCQLQGC*DFHSLDHQSTQFSQ Trigger: CTGGGAGAATTGTGTTGACTGGTGATCTAGACTATGAAAATCCAAGCAACCTTGCAGTTGGCAATGTGTACAATGTGATGATCCAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS TCA 72 bp | CTAGAATCAAGGTCAGTGCACGTCAGCTTGAAATTCTaGATGTTTGTGCCAACTTTTAGATCCACTGGGATG | + |
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Preference number: 6 (lower is better) Translates to: LESRSVHVSLKF*MFVPTFRSTGM Trigger: CATCCCAGTGGATCTAAAAGTTGGCACAAACATTCAGAATTTCAAGCTGACGTGCACTGACCTTGATTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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| CDS CAA 72 bp | TCATCACATTGTACACATTGCCAACTGCAAGGTTGCTaGGATTTTCATAGTCTAGATCACCAGTCAACACAA | + |
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Preference number: 6 (lower is better) Translates to: SSHCTHCQLQGC*DFHSLDHQSTQ Trigger: TTGTGTTGACTGGTGATCTAGACTATGAAAATCCAAGCAACCTTGCAGTTGGCAATGTGTACAATGTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095774.3 |
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