Pregenerated sensors for CDHR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021803Ensembl transcript IDs: ENSMUST00000022337.11
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGCTGAGAACAAACCTCCATTAACCTGTTGGTTGGCTGAAGCTTaGGGATCCAGATTCTTGCCACTCTTGTTACTTGTGGCCAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: SAENKPPLTCWLAEA*GSRFLPLLLLVARG Trigger: GCCCCTGGCCACAAGTAACAAGAGTGGCAAGAATCTGGATCCCCAAGCTTCAGCCAACCAACAGGTTAATGGAGGTTTGTTCTCAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CCA 90 bp | ACAGTATCTCCAAGAACACGTGATATGAGAAGAGCTGGATCAGAATaGGAGCCTTCCCTAAGCTCAAGCTTGATATCCACCTCGCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: TVSPRTRDMRRAGSE*EPSLSSSLISTSPC Trigger: ACAAGGCGAGGTGGATATCAAGCTTGAGCTTAGGGAAGGCTCCCATTCTGATCCAGCTCTTCTCATATCACGTGTTCTTGGAGATACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CCA 90 bp | AACAAGATAAATCCCAAGAAGAGAAAAACAGTCAACAGTGTGGAATaGGGGGCTCTCAGACCAGATCCCTGCCACCAATTCACTGCATGC | + |
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Preference number: 1 (lower is better) Translates to: NKINPKKRKTVNSVE*GALRPDPCHQFTAC Trigger: GCATGCAGTGAATTGGTGGCAGGGATCTGGTCTGAGAGCCCCCCATTCCACACTGTTGACTGTTTTTCTCTTCTTGGGATTTATCTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 90 bp | ACATACATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTaGGGGAAAGCCATTATCAGGCTGGCTGTTCCCAACCTCATCATA | + |
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Preference number: 1 (lower is better) Translates to: TYMVESGEQKKTYVS*GKAIIRLAVPNLII Trigger: TATGATGAGGTTGGGAACAGCCAGCCTGATAATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 90 bp | TTACCATTTACAGAAGAGGTTAACAGCATGCATATTATAGGATGCTaGACTCCCTGTGGTGGCAAACATGATCCAGCTCAGCACTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: LPFTEEVNSMHIIGC*TPCGGKHDPAQHFP Trigger: TGGAAAGTGCTGAGCTGGATCATGTTTGCCACCACAGGGAGTTCAGCATCCTATAATATGCATGCTGTTAACCTCTTCTGTAAATGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 90 bp | TGGGTAGAAATACACAGACTTGACTCCTTGTGGACTTCTATTCTCTaGAGAATAGAGAGCATTATAGATGTGTCAAGGATTTGGGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: WVEIHRLDSLWTSIL*RIESIIDVSRIWAV Trigger: CACTGCCCAAATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAAGTCCACAAGGAGTCAAGTCTGTGTATTTCTACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CAA 90 bp | CCTCCATTAACCTGTTGGTTGGCTGAAGCTTGGGGATCCAGATTCTaGCCACTCTTGTTACTTGTGGCCAGGGGCCCTACTTCTCAACTA | + |
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Preference number: 2 (lower is better) Translates to: PPLTCWLAEAWGSRF*PLLLLVARGPTSQL Trigger: TAGTTGAGAAGTAGGGCCCCTGGCCACAAGTAACAAGAGTGGCAAGAATCTGGATCCCCAAGCTTCAGCCAACCAACAGGTTAATGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CAA 90 bp | ACCTGTTGGTTGGCTGAAGCTTGGGGATCCAGATTCTTGCCACTCTaGTTACTTGTGGCCAGGGGCCCTACTTCTCAACTAAAGATGACA | + |
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Preference number: 2 (lower is better) Translates to: TCWLAEAWGSRFLPL*LLVARGPTSQLKMT Trigger: TGTCATCTTTAGTTGAGAAGTAGGGCCCCTGGCCACAAGTAACAAGAGTGGCAAGAATCTGGATCCCCAAGCTTCAGCCAACCAACAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR TCA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATAACCTGTTGGTTGGCTaGAGCTTGGGGATCCAGATT | + |
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Preference number: 2 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNNLLVG*SLGIQI Trigger: AATCTGGATCCCCAAGCTTCAGCCAACCAACAGGTT...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CAA 90 bp | GAGAGCATTATAGATGTGTCAAGGATTTGGGCAGTGGGTATGTATTaGCCAACTGCATCTCACAGTCTGAGGCATCTCTTGCCCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ESIIDVSRIWAVGMY*PTASHSLRHLLPKA Trigger: GGCTTTGGGCAAGAGATGCCTCAGACTGTGAGATGCAGTTGGCAAATACATACCCACTGCCCAAATCCTTGACACATCTATAATGCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR TCA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTTCCTACAAAGCTCACTaGCTTTCAACTTCAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTSYKAH*LSTSAE Trigger: CTCAGCTGAAGTTGAAAGTCAGTGAGCTTTGTAGGA...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR GCA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATGGGGATCCAGATTCTTaGCACTCTTGTTACTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: HGGEWRTEENLCELRESHGDPDS*HSCYLW Trigger: CCACAAGTAACAAGAGTGGCAAGAATCTGGATCCCC...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CCA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTATGGAGCCAGATTACTaGCTTCCAACAAATACTTTG | + |
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Preference number: 2 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTMEPDY*LPTNTL Trigger: CAAAGTATTTGTTGGAAGCCAGTAATCTGGCTCCAT...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTCCAGGAGGACTCCAGTaGTTGTGGGGTCTAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLPGGLQ*LWGLEL Trigger: CAACTCTAGACCCCACAATCACTGGAGTCCTCCTGG...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGGACTTCTATTCTCTGAAGAATAGAGAGCATTATAGATGTGTCAAGGATCTGCATCTCACAGTCTaGGGCATCTCTTGCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LVDFYSLKNREHYRCVKDLHLTV*GISCPK Trigger: CTTTGGGCAAGAGATGCCTCAGACTGTGAGATGCAG...ATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAAGTCCACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CCA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATGCTTTCAGAGCATTTTaGCCCTTTTCTTACCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: HGGEWRTEENLCELRESHAFRAF*PFSYLF Trigger: AAACAGGTAAGAAAAGGGCCAAAATGCTCTGAAAGC...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CAA 90 bp | AGTCAACATGAGCTTTCAGAGCATTTTGGCCCTTTTCTTACCTGTTaGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SQHELSEHFGPFLTC*YRYILQSSLTFNFS Trigger: GCTGAAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAAGGGCCAAAATGCTCTGAAAGCTCATGTTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCGAGGCTGGAGATTTCTaGTCTCTGTCTAGGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LLCRISLLKIITYEQDKSEAGDF*SLSRKR Trigger: CCTCTTCCTAGACAGAGAGCAGAAATCTCCAGCCTC...GGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CAA 90 bp | TTCTATTCTCTGAAGAATAGAGAGCATTATAGATGTGTCAAGGATTaGGGCAGTGGGTATGTATTTGCCAACTGCATCTCACAGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: FYSLKNREHYRCVKD*GSGYVFANCISQSE Trigger: CTCAGACTGTGAGATGCAGTTGGCAAATACATACCCACTGCCCAAATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGCAAGGATTTGGGCAGTaGGTATGTATTTGCCAACTG | + |
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Preference number: 2 (lower is better) Translates to: SQITGFQQILCNPNALHLQGFGQ*VCICQL Trigger: CAGTTGGCAAATACATACCCACTGCCCAAATCCTTG...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAACCTCCATTAACCTGTTaGTTGGCTGAAGCTTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LCRISLLKIITYEQDKSQPPLTC*LAEAWG Trigger: TCCCCAAGCTTCAGCCAACCAACAGGTTAATGGAGG...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR GCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAATGGACTGGAGCTTACTaGCTGACTCTGGTTCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LCRISLLKIITYEQDKSQWTGAY*LTLVLC Trigger: ACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCA...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAACTGCCACCAATTCACTaGATGCATGGAGTCAATAAC | + |
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Preference number: 2 (lower is better) Translates to: PLLCRISLLKIITYEQDKLPPIH*MHGVNN Trigger: GTTATTGACTCCATGCATGCAGTGAATTGGTGGCAG...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCTATGTATTTGCCAACTaGATCTCACAGTCTGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LLCRISLLKIITYEQDKSYVFAN*ISQSEA Trigger: TGCCTCAGACTGTGAGATGCAGTTGGCAAATACATA...GGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAACTAATGCTTTGCACTTaGTTAAAACCCCCAGACTCA | + |
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Preference number: 2 (lower is better) Translates to: PLLCRISLLKIITYEQDKLMLCT*LKPPDS Trigger: TGAGTCTGGGGGTTTTAAGCAAGTGCAAAGCATTAG...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCGATGTGTCAAGGATTTaGGCAGTGGGTATGTATTTG | + |
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Preference number: 2 (lower is better) Translates to: LLCRISLLKIITYEQDKSDVSRI*AVGMYL Trigger: CAAATACATACCCACTGCCCAAATCCTTGACACATC...GGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCGTAATCCTAATGCTTTaGACTTGCTTAAAACCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LLCRISLLKIITYEQDKSVILML*TCLKPP Trigger: TGGGGGTTTTAAGCAAGTGCAAAGCATTAGGATTAC...GGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAACTTGAGGGTCAGAATTaGGGGAAGAGAAGAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: LCRISLLKIITYEQDKSQLEGQN*GKRREK Trigger: TTTTTCTCTTCTCTTCCCCCAATTCTGACCCTCAAG...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CAA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCCATTAACCTGTTGGTaGGCTGAAGCTTGGGGATCC | + |
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Preference number: 3 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTPLTCW*AEAWGS Trigger: GGATCCCCAAGCTTCAGCCAACCAACAGGTTAATGG...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR GCA 72 bp | GGGGGCTCTCAGACCAGATCCCTGCCACCAATTCACTaGATGCATGGAGTCAATAACCCTAGAGAGTCATTT | + |
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Preference number: 3 (lower is better) Translates to: GGSQTRSLPPIH*MHGVNNPRESF Trigger: AAATGACTCTCTAGGGTTATTGACTCCATGCATGCAGTGAATTGGTGGCAGGGATCTGGTCTGAGAGCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR GCA 72 bp | GCTCTCAGACCAGATCCCTGCCACCAATTCACTGCATaGATGGAGTCAATAACCCTAGAGAGTCATTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: ALRPDPCHQFTA*MESITLESHFP Trigger: AGGGAAATGACTCTCTAGGGTTATTGACTCCATGCATGCAGTGAATTGGTGGCAGGGATCTGGTCTGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 72 bp | TCAACTAAAGATGACAAGGCCCCAGGAGGACTCCAGTaGTTGTGGGGTCTAGAGTTGGTGGGTAGAAATACA | + |
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Preference number: 3 (lower is better) Translates to: STKDDKAPGGLQ*LWGLELVGRNT Trigger: TGTATTTCTACCCACCAACTCTAGACCCCACAATCACTGGAGTCCTCCTGGGGCCTTGTCATCTTTAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 72 bp | GTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTaGGGGAAAGCCATTATCAGGCTGGCTGTTCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: VESGEQKKTYVS*GKAIIRLAVPN Trigger: GTTGGGAACAGCCAGCCTGATAATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 72 bp | TATTATAGGATGCTGAACTCCCTGTGGTGGCAAACATaGTCCAGCTCAGCACTTTCCAGGCTGGACTTTAGC | + |
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Preference number: 3 (lower is better) Translates to: YYRMLNSLWWQT*SSSALSRLDFS Trigger: GCTAAAGTCCAGCCTGGAAAGTGCTGAGCTGGATCATGTTTGCCACCACAGGGAGTTCAGCATCCTATAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CCA 72 bp | CCAAGAACACGTGATATGAGAAGAGCTGGATCAGAATaGGAGCCTTCCCTAAGCTCAAGCTTGATATCCACC | + |
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Preference number: 3 (lower is better) Translates to: PRTRDMRRAGSE*EPSLSSSLIST Trigger: GGTGGATATCAAGCTTGAGCTTAGGGAAGGCTCCCATTCTGATCCAGCTCTTCTCATATCACGTGTTCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CCA 72 bp | CTAGAGAGTCATTTCCCTGTCTCAGCCAAACAGACTTaGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: LESHFPVSAKQT*TGAYCLTLVLC Trigger: ACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACTCTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CAA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATGCAGTGGGTATGTATTaGCCAACTGCATCTCACAGT | + |
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Preference number: 3 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNAVGMY*PTASHS Trigger: ACTGTGAGATGCAGTTGGCAAATACATACCCACTGC...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 72 bp | ACATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTaGGTTGAGGGAAAGCCATTATCAGGCTGGCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: TWWRVANRRKLM*VEGKPLSGWLF Trigger: GAACAGCCAGCCTGATAATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CCA 72 bp | TCAACTTCAGCTGAGAACAAACCTCCATTAACCTGTTaGTTGGCTGAAGCTTGGGGATCCAGATTCTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: STSAENKPPLTC*LAEAWGSRFLP Trigger: TGGCAAGAATCTGGATCCCCAAGCTTCAGCCAACCAACAGGTTAATGGAGGTTTGTTCTCAGCTGAAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 72 bp | ACAGAAGAGGTTAACAGCATGCATATTATAGGATGCTaGACTCCCTGTGGTGGCAAACATGATCCAGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: TEEVNSMHIIGC*TPCGGKHDPAQ Trigger: CTGAGCTGGATCATGTTTGCCACCACAGGGAGTTCAGCATCCTATAATATGCATGCTGTTAACCTCTTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CCA 72 bp | AACAAACCTCCATTAACCTGTTGGTTGGCTGAAGCTTaGGGATCCAGATTCTTGCCACTCTTGTTACTTGTG | + |
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Preference number: 3 (lower is better) Translates to: NKPPLTCWLAEA*GSRFLPLLLLV Trigger: CACAAGTAACAAGAGTGGCAAGAATCTGGATCCCCAAGCTTCAGCCAACCAACAGGTTAATGGAGGTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 72 bp | CATCATAGTCCTTCCTGGGTGCTAACACTTTCTGAATaGGATGGAGCCAGATTACTGGCTTCCAACAAATAC | + |
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Preference number: 3 (lower is better) Translates to: HHSPSWVLTLSE*DGARLLASNKY Trigger: GTATTTGTTGGAAGCCAGTAATCTGGCTCCATCTCATTCAGAAAGTGTTAGCACCCAGGAAGGACTATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGTCCCTAAGCTCAAGCTaGATATCCACCTCGCCTTGT | + |
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Preference number: 3 (lower is better) Translates to: SQITGFQQILCNPNALHLSLSSS*ISTSPC Trigger: ACAAGGCGAGGTGGATATCAAGCTTGAGCTTAGGGA...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 72 bp | TGGGGTCTAGAGTTGGTGGGTAGAAATACACAGACTTaGCTCCTTGTGGACTTCTATTCTCTGAAGAATAGA | + |
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Preference number: 3 (lower is better) Translates to: WGLELVGRNTQT*LLVDFYSLKNR Trigger: TCTATTCTTCAGAGAATAGAAGTCCACAAGGAGTCAAGTCTGTGTATTTCTACCCACCAACTCTAGACCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR TCA 72 bp | AGACAATACGATGTTAACAGTATCTCCAAGAACACGTaGTATGAGAAGAGCTGGATCAGAATGGGAGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: RQYDVNSISKNT*YEKSWIRMGAF Trigger: GAAGGCTCCCATTCTGATCCAGCTCTTCTCATATCACGTGTTCTTGGAGATACTGTTAACATCGTATTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTAGATGTGTCAAGGATTaGGGCAGTGGGTATGTATTT | + |
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Preference number: 3 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLRCVKD*GSGYVF Trigger: AAATACATACCCACTGCCCAAATCCTTGACACATCT...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGCCTTTTCTTACCTGTTaGTATCGCTACATCCTACAA | + |
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Preference number: 3 (lower is better) Translates to: SQITGFQQILCNPNALHLPFLTC*YRYILQ Trigger: TTGTAGGATGTAGCGATACAAACAGGTAAGAAAAGG...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR GCA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCAGCCCCTCGAAGCCTaGCCCCACCATCCTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTQPLEA*PHHPWQ Trigger: TTGCCAAGGATGGTGGGGGCAGGCTTCGAGGGGCTG...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| 3UTR CAA 72 bp | ACCTGTTGGTTGGCTGAAGCTTGGGGATCCAGATTCTaGCCACTCTTGTTACTTGTGGCCAGGGGCCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: TCWLAEAWGSRF*PLLLLVARGPT Trigger: AGTAGGGCCCCTGGCCACAAGTAACAAGAGTGGCAAGAATCTGGATCCCCAAGCTTCAGCCAACCAACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| 3UTR CAA 72 bp | GCTGGATCAGAATGGGAGCCTTCCCTAAGCTCAAGCTaGATATCCACCTCGCCTTGTCTCTTCAAGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGSEWEPSLSSS*ISTSPCLFKGG Trigger: GCCTCCCTTGAAGAGACAAGGCGAGGTGGATATCAAGCTTGAGCTTAGGGAAGGCTCCCATTCTGATCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTGGGCCATGTTCCCGTTaGTGCTGCCCACTCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTGPCSR*CCPLHC Trigger: ACAATGGAGTGGGCAGCACCAACGGGAACATGGCCC...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATTGGTCACTGGGACTGTaGCCTGAGCAGCTGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNWSLGL*PEQLGF Trigger: GAAGCCCAGCTGCTCAGGCCACAGTCCCAGTGACCA...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATGAGAGCTGGAGCTCTTaGGGGCACCATGACTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNESWSS*GHHDSH Trigger: GTGGGAGTCATGGTGCCCCCAAGAGCTCCAGCTCTC...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATGGGTGGTGGGAGAGCTaGAGCTCTTGGGGGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HGGEWRTEENLCELRESHGWWES*SSWGHH Trigger: ATGGTGCCCCCAAGAGCTCCAGCTCTCCCACCACCC...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATGGCCTCCCAGGGTCTTaGGTGTGGGTAACTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HGGEWRTEENLCELRESHGLPGS*VWVTVG Trigger: CCCCACAGTTACCCACACCCAAGACCCTGGGAGGCC...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR TCA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTGGATTGTCCTTGGTCTaGATCAGGAAGGCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTGLSLV*IRKAAM Trigger: CATGGCTGCCTTCCTGATTCAGACCAAGGACAATCC...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATTCTCATAGTCCAGTGTaGCCCCAGCCTGGAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNSHSPV*PQPGVS Trigger: TGAGACTCCAGGCTGGGGCCACACTGGACTATGAGA...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATAGCAGCTGGGCTTCCTaGAGAGTTGACCTCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNSSWAS*RVDLCH Trigger: GTGACAGAGGTCAACTCTCCAGGAAGCCCAGCTGCT...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATCCAGGGTCTTGGGTGTaGGTAACTGTGGGGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGGEWRTEENLCELRESHPGSWV*VTVGMA Trigger: AGCCATCCCCACAGTTACCCACACCCAAGACCCTGG...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| 3UTR CAA 72 bp | TTGGCTGAAGCTTGGGGATCCAGATTCTTGCCACTCTaGTTACTTGTGGCCAGGGGCCCTACTTCTCAACTA | + |
|
Preference number: 4 (lower is better) Translates to: LAEAWGSRFLPL*LLVARGPTSQL Trigger: TAGTTGAGAAGTAGGGCCCCTGGCCACAAGTAACAAGAGTGGCAAGAATCTGGATCCCCAAGCTTCAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATAGTGAGGGGCAAAGTTaGCCTGGGCTAGGTAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNSEGQS*PGLGKC Trigger: GCATTTACCTAGCCCAGGCCAACTTTGCCCCTCACT...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATCGGAGAATCTCCCCCTaGGGTGGGTGCTCAAACATA | + |
|
Preference number: 4 (lower is better) Translates to: HGGEWRTEENLCELRESHRRISP*GGCSNI Trigger: TATGTTTGAGCACCCACCCCAGGGGGAGATTCTCCG...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATGTGGACTTTGCCCCATaGTCCTGTATCTGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNVDFAP*SCIWIH Trigger: GTGGATCCAGATACAGGACCATGGGGCAAAGTCCAC...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR TCA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGACTGGGACTGTGGCCTaGGCAGCTGGGCTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQITGFQQILCNPNALHLTGTVA*AAGLPG Trigger: TCCAGGAAGCCCAGCTGCTCAGGCCACAGTCCCAGT...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR TCA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATGTAAGGCTGTTGTACTaGAAGATGGGGAGCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HGGEWRTEENLCELRESHVRLLY*KMGSLG Trigger: ACCGAGGCTCCCCATCTTTCAGTACAACAGCCTTAC...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATCTCTCCATAGAAGGTTaGAGGGTGGTTGTTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNLSIEG*RVVVEV Trigger: GACCTCAACAACCACCCTCCAACCTTCTATGGAGAG...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAAGACGGTGGTGGTGGCTaGGAACACCATGTCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLCRISLLKIITYEQDKDGGGG*EHHVSP Trigger: GGGGCTGACATGGTGTTCTCAGCCACCACCACCGTC...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTAGCAGGGCAGGGCTCTaGAGGACGGAGATGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLSRAGL*RTEMAP Trigger: TGGAGCCATCTCCGTCCTTCAGAGCCCTGCCCTGCT...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR GCA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATTATCACGACTTTCTCTaGCACCAGGTTCAGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HGGEWRTEENLCELRESHYHDFL*HQVQAI Trigger: GATGGCCTGAACCTGGTGGCAGAGAAAGTCGTGATA...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTTGGGTGCTTCATCATTaGCATCTGTCACCAGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTWVLHH*HLSPVS Trigger: TGATACTGGTGACAGATGCCAATGATGAAGCACCCA...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATTTGGTGTCCAGAAGCTaGATCACAATGTCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNLVSRS*ITMSAV Trigger: CACAGCAGACATTGTGATCCAGCTTCTGGACACCAA...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGTGTCTTCTGGGAGGCTaGACAGGGCCATGTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQITGFQQILCNPNALHLCLLGG*TGPCSR Trigger: ACGGGAACATGGCCCTGTTCAGCCTCCCAGAAGACA...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | GCATATAGTGTTACAACATTATACAAAATAGGGGTGACCTTGAGGGTCAGAATTCACCGTCAGCACCTCTaGGCCAGGAAGGGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AYSVTTLYKIGVTLRVRIHRQHL*ARKGVF Trigger: GAAGACACCCTTCCTGGCTCAGAGGTGCTGACGGTG...AATTCTGACCCTCAAGGTCACCCCTATTTTGTATAATGTTGTAACACTATATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTTCTGTCACCTGTACATaGAGTTCATACACCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTSVTCT*SSYTSL Trigger: AAGAGAGGTGTATGAACTTCATGTACAGGTGACAGA...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | CTTGTGGACTTCTATTCTCTGAAGAATAGAGAGCATTATAGATGTGTCAAGGATCTGGATCCACAGCTGTaGCAGCCACCACGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVDFYSLKNREHYRCVKDLDPQL*QPPRWS Trigger: GCTCCAACGTGGTGGCTGTCACAGCTGTGGATCCAG...ATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAAGTCCACAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR GCA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATCTGGATGAACCTGGGTaGTTCATCATTGGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HGGEWRTEENLCELRESHLDEPG*FIIGIC Trigger: ACAGATGCCAATGATGAAGCACCCAGGTTCATCCAG...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR GCA 90 bp | CTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCCTCGGTCCTTGGCCTaGACCTGTAGGGACCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLCRISLLKIITYEQDKSPRSLA*TCRDHE Trigger: CTCATGGTCCCTACAGGTGCAGGCCAAGGACCGAGG...GGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGGATCCTGATGGTCACTaGGACTGTGGCCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQITGFQQILCNPNALHLDPDGH*DCGLSS Trigger: GCTGCTCAGGCCACAGTCCCAGTGACCATCAGGATC...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATCACCTACGGCTTTCATaGGATTGTCCTTGGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGGEWRTEENLCELRESHHLRLS*DCPWSE Trigger: TTCAGACCAAGGACAATCCCATGAAAGCCGTAGGTG...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTAGTCCCCACTGGGTGTaGTGTTGTGTAGGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLSPHWV*CCVGPP Trigger: TGGAGGCCCTACACAACATCACACCCAGTGGGGACT...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | CTTGTGGACTTCTATTCTCTGAAGAATAGAGAGCATTATAGATGTGTCAAGGATTGTGGCCTGAGCAGCTaGGCTTCCTGGAGAGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVDFYSLKNREHYRCVKDCGLSS*ASWRVD Trigger: GTCAACTCTCCAGGAAGCCCAGCTGCTCAGGCCACA...ATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAAGTCCACAAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAACTGTGGGGATGGCTGTaGGGTGAGGGATCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCRISLLKIITYEQDKSQLWGWL*GEGSRD Trigger: GTCTCTGGATCCCTCACCCCACAGCCATCCCCACAG...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| 3UTR CAA 72 bp | ATAGATGTGTCAAGGATTTGGGCAGTGGGTATGTATTaGCCAACTGCATCTCACAGTCTGAGGCATCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IDVSRIWAVGMY*PTASHSLRHLL Trigger: CAAGAGATGCCTCAGACTGTGAGATGCAGTTGGCAAATACATACCCACTGCCCAAATCCTTGACACATCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | CTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCTCTTGGGGGCACCATaGCTCCCACTCTGCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLCRISLLKIITYEQDKSLLGAP*LPLCCY Trigger: ATAACAGCAGAGTGGGAGTCATGGTGCCCCCAAGAG...GGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | GCATATAGTGTTACAACATTATACAAAATAGGGGTGACCTTGAGGGTCAGAATTCTCGGTCTCCATCTATaGCAACCACCGTCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AYSVTTLYKIGVTLRVRILGLHL*QPPSAP Trigger: AGGTGCTGACGGTGGTTGCCATAGATGGAGACCGAG...AATTCTGACCCTCAAGGTCACCCCTATTTTGTATAATGTTGTAACACTATATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGTTGGCATTGGCTCCCTaGTCTGAGTCGTTGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQITGFQQILCNPNALHLLALAP*SESLTV Trigger: CACTGTCAACGACTCAGACCAGGGAGCCAATGCCAA...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CTTGTGGACTTCTATTCTCTGAAGAATAGAGAGCATTATAGATGTGTCAAGGATATTCAGGACGGTCTGTaGCACCACTCGGAAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVDFYSLKNREHYRCVKDIQDGL*HHSEDA Trigger: GGCATCTTCCGAGTGGTGCCACAGACCGTCCTGAAT...ATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAAGTCCACAAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGCCATGGTCCTGTATCTaGATCCACAGCTGTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQITGFQQILCNPNALHLPWSCI*IHSCDS Trigger: GCTGTCACAGCTGTGGATCCAGATACAGGACCATGG...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCTATTCGAACTGTGTaGGGAGCAGGGCTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLCRISLLKIITYEQDKSIRTV*GAGLGL Trigger: AAGGCCCAGCCCTGCTCCCCACACAGTTCGAATAGA...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAACATTTTAGGGGGTGGTaGGAGAGCTGGAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLCRISLLKIITYEQDKHFRGW*ESWSSW Trigger: CCAAGAGCTCCAGCTCTCCCACCACCCCCTAAAATG...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAACCATTGTCAAAGAAGTaGGGGGCAAAGTTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLCRISLLKIITYEQDKPLSKK*GAKLAW Trigger: CCAGGCCAACTTTGCCCCTCACTTCTTTGACAATGG...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR TCA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGATAGGGGCCGTGTCCTaGACATCTTCCACATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQITGFQQILCNPNALHLIGAVS*TSSTLM Trigger: CATCAATGTGGAAGATGTTCAGGACACGGCCCCTAT...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR TCA 90 bp | CTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCGGCTTCCTGGAGAGTTaGCCTCTGTCACCTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LLCRISLLKIITYEQDKSGFLES*PLSPVH Trigger: ATGTACAGGTGACAGAGGTCAACTCTCCAGGAAGCC...GGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR TCA 90 bp | GCATATAGTGTTACAACATTATACAAAATAGGGGTGACCTTGAGGGTCAGAATTCCACCAGCCGTAAGTTaGATTTGGCATTGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AYSVTTLYKIGVTLRVRIPPAVS*IWHWLP Trigger: AGGGAGCCAATGCCAAATTCAACTTACGGCTGGTGG...AATTCTGACCCTCAAGGTCACCCCTATTTTGTATAATGTTGTAACACTATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR GCA 90 bp | CTTGTGGACTTCTATTCTCTGAAGAATAGAGAGCATTATAGATGTGTCAAGGATCCATGTTCCCGTTGGTaGTGCCCACTCCATTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVDFYSLKNREHYRCVKDPCSRW*CPLHCQ Trigger: TTGACAATGGAGTGGGCAGCACCAACGGGAACATGG...ATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAAGTCCACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTTACAGGAGTGTCTTCTaGGAGGCTGAACAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLYRSVF*EAEQGH Trigger: ATGGCCCTGTTCAGCCTCCCAGAAGACACTCCTGTA...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGTCCTTGTCCTCTGCCTaGACCTTAAAGATGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQITGFQQILCNPNALHLSLSSA*TLKMLL Trigger: GAGCAGCATCTTTAAGGTCCAGGCAGAGGACAAGGA...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAAAATCTCCCCCTGGGGTaGGTGCTCAAACATAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLCRISLLKIITYEQDKNLPLG*VLKHRE Trigger: CTCTCTATGTTTGAGCACCCACCCCAGGGGGAGATT...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | GCATATAGTGTTACAACATTATACAAAATAGGGGTGACCTTGAGGGTCAGAATTTGTTGTACTGAAAGATaGGGAGCCTCGGTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AYSVTTLYKIGVTLRVRICCTER*GASVLG Trigger: GCCAAGGACCGAGGCTCCCCATCTTTCAGTACAACA...AATTCTGACCCTCAAGGTCACCCCTATTTTGTATAATGTTGTAACACTATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | CTTGTGGACTTCTATTCTCTGAAGAATAGAGAGCATTATAGATGTGTCAAGGATTCAGGAAGGCAGCCATaGAACCTCTGGATAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVDFYSLKNREHYRCVKDSGRQP*NLWIAS Trigger: AGAGGCTATCCAGAGGTTCCATGGCTGCCTTCCTGA...ATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAAGTCCACAAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAATGCCATTTTAGGGGGTaGTGGGAGAGCTGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCRISLLKIITYEQDKSQCHFRG*WESWSS Trigger: AGAGCTCCAGCTCTCCCACCACCCCCTAAAATGGCA...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| 3UTR CAA 72 bp | GAGCTTTCAGAGCATTTTGGCCCTTTTCTTACCTGTTaGTATCGCTACATCCTACAAAGCTCACTGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELSEHFGPFLTC*YRYILQSSLTF Trigger: GAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAAGGGCCAAAATGCTCTGAAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTTGTCTGCTGTGGAACTaGACTTCTCTGGGGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLCLLWN*TSLGCS Trigger: TGAACACCCCAGAGAAGTTCAGTTCCACAGCAGACA...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR GCA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGTGTGTCCTTGTCCTCTaGCTGGACCTTAAAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQITGFQQILCNPNALHLCVLVL*LDLKDA Trigger: AGCATCTTTAAGGTCCAGGCAGAGGACAAGGACACA...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAACGCTGTGACGGTCCATaGAGAACTTGGAGGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LCRISLLKIITYEQDKSQRCDGP*RTWRSV Trigger: TACACTCCTCCAAGTTCTCCATGGACCGTCACAGCG...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCGGCTCCTCTGCATCCTaGTCTGTTGCCTCAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLCRISLLKIITYEQDKSGSSAS*SVASIF Trigger: GAAAATTGAGGCAACAGACCAGGATGCAGAGGAGCC...GGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR TCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAACCACAACAATTGCCATaGCACCAGCCAGTACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: LCRISLLKIITYEQDKSQPQQLP*HQPVHL Trigger: TAGGTGTACTGGCTGGTGTCATGGCAATTGTTGTGG...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAAAGCAGGTATGTTCTCTaGAACCCGGATGATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLCRISLLKIITYEQDKSRYVL*NPDDVR Trigger: CCTTACATCATCCGGGTTCCAGAGAACATACCTGCT...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAATGTAGAGGATGTGGTTaGGTTTGCCTCGGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCRISLLKIITYEQDKSQCRGCG*VCLGLH Trigger: ATGGAGACCGAGGCAAACCCAACCACATCCTCTACA...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTACTATGATGGTCACTTaGGCTTCATTCAGGACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLTMMVT*ASFRTV Trigger: GACCGTCCTGAATGAAGCCCAAGTGACCATCATAGT...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | GCATATAGTGTTACAACATTATACAAAATAGGGGTGACCTTGAGGGTCAGAATTTGCCTCAATTTTCAGTaGGGTCCCCAGTACCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: AYSVTTLYKIGVTLRVRICLNFQ*GPQYHC Trigger: ACAATGGTACTGGGGACCCCACTGAAAATTGAGGCA...AATTCTGACCCTCAAGGTCACCCCTATTTTGTATAATGTTGTAACACTATATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTTCATGGGATTGTCCTTaGTCTGAATCAGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLSWDCP*SESGRQ Trigger: CTGCCTTCCTGATTCAGACCAAGGACAATCCCATGA...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTGCTCTTCCACCAGAGTaGTGTTTCCAAAATTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLALPPE*CFQNWD Trigger: ATCCCAATTTTGGAAACATCACTCTGGTGGAAGAGC...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR TCA 90 bp | GCATATAGTGTTACAACATTATACAAAATAGGGGTGACCTTGAGGGTCAGAATTTGTAGTAGTGCGAGGTaGACTTGGGGACATTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: AYSVTTLYKIGVTLRVRICSSAR*TWGHYH Trigger: ATGATAATGTCCCCAAGTTCACCTCGCACTACTACA...AATTCTGACCCTCAAGGTCACCCCTATTTTGTATAATGTTGTAACACTATATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR GCA 90 bp | GCATATAGTGTTACAACATTATACAAAATAGGGGTGACCTTGAGGGTCAGAATTCTGGATCACAATGTCTaGTGTGGAACTGAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AYSVTTLYKIGVTLRVRILDHNV*CGTELL Trigger: GAGAAGTTCAGTTCCACAGCAGACATTGTGATCCAG...AATTCTGACCCTCAAGGTCACCCCTATTTTGTATAATGTTGTAACACTATATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR GCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAATGCATCCTGGTCTGTTaGCTCAATTTTCAGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCRISLLKIITYEQDKSQCILVC*LNFQWG Trigger: ACCCCACTGAAAATTGAGGCAACAGACCAGGATGCA...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | CTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCAAAGTCAATGGCAGCTaGGTTTTCCACTATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCRISLLKIITYEQDKSKVNGS*VFHYDG Trigger: ACCATCATAGTGGAAAACTCAGCTGCCATTGACTTT...GGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAATGGGGACATTATCATTaGTGTCCAGAAGCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LCRISLLKIITYEQDKSQWGHYH*CPEAGS Trigger: TGATCCAGCTTCTGGACACCAATGATAATGTCCCCA...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR TCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAATCTCAAACTTTTGCTTaGGCTCAGACACCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCRISLLKIITYEQDKSQSQTFA*AQTPKK Trigger: CTTCTTTGGTGTCTGAGCTCAAGCAAAAGTTTGAGA...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR GCA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAAAATTTCCCCTGTGTGTaGATCAATGTCAAACACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCRISLLKIITYEQDKSQNFPCV*INVKHV Trigger: AACGTGTTTGACATTGATGCACACACAGGGGAAATT...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 90 bp | GCAGCCTTGGCCCTCCTGAATTTGAGCCACTCTATTCGAACTGTGTaGGGAGCAGGGCTGGGCCTTCTACGGAGCACACGCCGCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AALALLNLSHSIRTV*GAGLGLLRSTRRTG Trigger: GCCTGTGCGGCGTGTGCTCCGTAGAAGGCCCAGCCCTGCTCCCCACACAGTTCGAATAGAGTGGCTCAAATTCAGGAGGGCCAAGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS TCA 90 bp | CGTGTCCTGAACATCTTCCACATTGATGGTGACGGTGGTGGTGGCTaGGAACACCATGTCAGCCCCTCGAAGCCTGCCCCCACCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RVLNIFHIDGDGGGG*EHHVSPSKPAPTIL Trigger: AAGGATGGTGGGGGCAGGCTTCGAGGGGCTGACATGGTGTTCTCAGCCACCACCACCGTCACCATCAATGTGGAAGATGTTCAGGACACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 90 bp | GAGGTCCACGATCCTGATGGTCACTGGGACTGTGGCCTGAGCAGCTaGGCTTCCTGGAGAGTTGACCTCTGTCACCTGTACATGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVHDPDGHWDCGLSS*ASWRVDLCHLYMKF Trigger: GAACTTCATGTACAGGTGACAGAGGTCAACTCTCCAGGAAGCCCAGCTGCTCAGGCCACAGTCCCAGTGACCATCAGGATCGTGGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 90 bp | AGAGCCTGTAGAGGATGTGGTTGGGTTTGCCTCGGTCTCCATCTATaGCAACCACCGTCAGCACCTCTGAGCCAGGAAGGGTGTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RACRGCGWVCLGLHL*QPPSAPLSQEGCLH Trigger: ATGAAGACACCCTTCCTGGCTCAGAGGTGCTGACGGTGGTTGCCATAGATGGAGACCGAGGCAAACCCAACCACATCCTCTACAGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 90 bp | CACAGCTGTGACAGCCACCACGTTGGAGCCTCCTGGAGCATTCTCTaGGATCCTGGCAATGTAGTAGTGCGAGGTGAACTTGGGGACATT | + |
|
Preference number: 5 (lower is better) Translates to: HSCDSHHVGASWSIL*DPGNVVVRGELGDI Trigger: AATGTCCCCAAGTTCACCTCGCACTACTACATTGCCAGGATCCCAGAGAATGCTCCAGGAGGCTCCAACGTGGTGGCTGTCACAGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | CATGGTGGAGAGTGGCGAACAGAAGAAAACTTATGTGAGTTGAGGGAAAGCCATGGGGAGCCTCGGTCCTaGGCCTGCACCTGTAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HGGEWRTEENLCELRESHGEPRS*ACTCRD Trigger: GTCCCTACAGGTGCAGGCCAAGGACCGAGGCTCCCC...ATGGCTTTCCCTCAACTCACATAAGTTTTCTTCTGTTCGCCACTCTCCACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS GCA 90 bp | TTCCGTCACTCTCATTCAAGAGCCTGTAGAGGATGTGGTTGGGTTTaGCTCGGTCTCCATCTATGGCAACCACCGTCAGCACCTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRHSHSRACRGCGWV*LGLHLWQPPSAPLS Trigger: GCTCAGAGGTGCTGACGGTGGTTGCCATAGATGGAGACCGAGGCAAACCCAACCACATCCTCTACAGGCTCTTGAATGAGAGTGACGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 90 bp | TGTATCTGGATCCACAGCTGTGACAGCCACCACGTTGGAGCCTCCTaGAGCATTCTCTGGGATCCTGGCAATGTAGTAGTGCGAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CIWIHSCDSHHVGAS*SILWDPGNVVVRGE Trigger: TTCACCTCGCACTACTACATTGCCAGGATCCCAGAGAATGCTCCAGGAGGCTCCAACGTGGTGGCTGTCACAGCTGTGGATCCAGATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS TCA 90 bp | TTAGGGTGTACACATGAGAACCTACAGGAGTGTCTTCTGGGAGGCTaGACAGGGCCATGTTCCCGTTGGTGCTGCCCACTCCATTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGCTHENLQECLLGG*TGPCSRWCCPLHCQ Trigger: TTGACAATGGAGTGGGCAGCACCAACGGGAACATGGCCCTGTTCAGCCTCCCAGAAGACACTCCTGTAGGTTCTCATGTGTACACCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 90 bp | TCTGAGTCGTTGACAGTGATCTTGAGTCCACGGAGAATCTCCCCCTaGGGTGGGTGCTCAAACATAGAGAGCTCAAACTTGTTCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SESLTVILSPRRISP*GGCSNIESSNLFWG Trigger: GCCCCAGAACAAGTTTGAGCTCTCTATGTTTGAGCACCCACCCCAGGGGGAGATTCTCCGTGGACTCAAGATCACTGTCAACGACTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATGTGACAGCCACCACGTaGGAGCCTCCTGGAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNVTATT*EPPGAF Trigger: GAATGCTCCAGGAGGCTCCAACGTGGTGGCTGTCAC...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS TCA 90 bp | ACACCAGCCAGTACACCTACGGCTTTCATGGGATTGTCCTTGGTCTaGATCAGGAAGGCAGCCATGGAACCTCTGGATAGCCTCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TPASTPTAFMGLSLV*IRKAAMEPLDSLSV Trigger: TACAGAGAGGCTATCCAGAGGTTCCATGGCTGCCTTCCTGATTCAGACCAAGGACAATCCCATGAAAGCCGTAGGTGTACTGGCTGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 90 bp | CAGTGGATGGGTGAATTAAGAACAGGTCTGACCCGGTCCCATAGATaGAATAGTGGACTTTGCCCCATGGTCCTGTATCTGGATCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QWMGELRTGLTRSHR*NSGLCPMVLYLDPQ Trigger: CTGTGGATCCAGATACAGGACCATGGGGCAAAGTCCACTATTCCATCTATGGGACCGGGTCAGACCTGTTCTTAATTCACCCATCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATCCCACCAGCCGTAAGTaGAATTTGGCATTGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNPTSRK*NLALAP Trigger: GGGAGCCAATGCCAAATTCAACTTACGGCTGGTGGG...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCGCACAGGCAGGACCTaGTTAGACTTCTTGTTACGC | + |
|
Preference number: 5 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTRTGRT*LDFLLR Trigger: GCGTAACAAGAAGTCTAACAAGGTCCTGCCTGTGCG...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS GCA 90 bp | CTCCAAGGAGCGGATGGAATTCTTGAGCCTAATTTCCCCTGTGTGTaGATCAATGTCAAACACGTTGACTGGCTCTGCACGGGTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQGADGILEPNFPCV*INVKHVDWLCTGNG Trigger: TCCATTACCCGTGCAGAGCCAGTCAACGTGTTTGACATTGATGCACACACAGGGGAAATTAGGCTCAAGAATTCCATCCGCTCCTTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATCTGCATCCTGGTCTGTaGCCTCAATTTTCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNLHPGL*PQFSVG Trigger: CCCCACTGAAAATTGAGGCAACAGACCAGGATGCAG...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS GCA 90 bp | CTTGGGGACATTATCATTGGTGTCCAGAAGCTGGATCACAATGTCTaGTGTGGAACTGAACTTCTCTGGGGTGTTCACTTCAATGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGDIIIGVQKLDHNV*CGTELLWGVHFNGQ Trigger: CTGGCCATTGAAGTGAACACCCCAGAGAAGTTCAGTTCCACAGCAGACATTGTGATCCAGCTTCTGGACACCAATGATAATGTCCCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CCA 90 bp | TTTTCAAAGTCAATGGCAGCTGAGTTTTCCACTATGATGGTCACTTaGGCTTCATTCAGGACGGTCTGTGGCACCACTCGGAAGATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSKSMAAEFSTMMVT*ASFRTVCGTTRKMP Trigger: AGGCATCTTCCGAGTGGTGCCACAGACCGTCCTGAATGAAGCCCAAGTGACCATCATAGTGGAAAACTCAGCTGCCATTGACTTTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CCA 90 bp | GTCCAGAAGCTGGATCACAATGTCTGCTGTGGAACTGAACTTCTCTaGGGTGTTCACTTCAATGGCCAGGAGCTTGAAGGTCAACAACTT | + |
|
Preference number: 5 (lower is better) Translates to: VQKLDHNVCCGTELL*GVHFNGQELEGQQL Trigger: AAGTTGTTGACCTTCAAGCTCCTGGCCATTGAAGTGAACACCCCAGAGAAGTTCAGTTCCACAGCAGACATTGTGATCCAGCTTCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATCACTATGATGGTCACTaGGGCTTCATTCAGGACGGT | + |
|
Preference number: 5 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNHYDGH*GFIQDG Trigger: ACCGTCCTGAATGAAGCCCAAGTGACCATCATAGTG...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTACCTTGTTAGACTTCTaGTTACGCCAGAAGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTTLLDF*LRQKVA Trigger: GGCTACCTTCTGGCGTAACAAGAAGTCTAACAAGGT...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGCCACTGGGTGTGATGTaGTGTAGGGCCTCCAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQITGFQQILCNPNALHLPLGVM*CRASKE Trigger: CTCCTTGGAGGCCCTACACAACATCACACCCAGTGG...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | AGTCATTTCCCTGTCTCAGCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTTCTTCTCAAACTTTaGCTTGAGCTCAGACACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SHFPVSAKQTWTGAYCLTLLLKL*LELRHQ Trigger: TTGGTGTCTGAGCTCAAGCAAAAGTTTGAGAAGAAG...AGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGCTGAGACAGGGAAATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTCCAGAGCCTGTGTCCTaGTCCTCTGCCTGGACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLPEPVS*SSAWTL Trigger: TAAGGTCCAGGCAGAGGACAAGGACACAGGCTCTGG...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS TCA 90 bp | GAGCTTGAAGGTCAACAACTTAGACTTTTCAAAGTCAATGGCAGCTaGGTTTTCCACTATGATGGTCACTTGGGCTTCATTCAGGACGGT | + |
|
Preference number: 5 (lower is better) Translates to: ELEGQQLRLFKVNGS*VFHYDGHLGFIQDG Trigger: ACCGTCCTGAATGAAGCCCAAGTGACCATCATAGTGGAAAACTCAGCTGCCATTGACTTTGAAAAGTCTAAGTTGTTGACCTTCAAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTGGGCTTCCTGGAGAGTaGACCTCTGTCACCTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLGLPGE*TSVTCT Trigger: TGTACAGGTGACAGAGGTCAACTCTCCAGGAAGCCC...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | GCATATAGTGTTACAACATTATACAAAATAGGGGTGACCTTGAGGGTCAGAATTGTTGGAGGGTGGTTGTaGAGGTCCACGATCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AYSVTTLYKIGVTLRVRIVGGWL*RSTILM Trigger: CATCAGGATCGTGGACCTCAACAACCACCCTCCAAC...AATTCTGACCCTCAAGGTCACCCCTATTTTGTATAATGTTGTAACACTATATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | GCATATAGTGTTACAACATTATACAAAATAGGGGTGACCTTGAGGGTCAGAATTAAGGTTGGAGGGTGGTaGTTGAGGTCCACGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AYSVTTLYKIGVTLRVRIKVGGW*LRSTIL Trigger: CAGGATCGTGGACCTCAACAACCACCCTCCAACCTT...AATTCTGACCCTCAAGGTCACCCCTATTTTGTATAATGTTGTAACACTATATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGCCCTGGTCTGAGTCGTaGACAGTGATCTTGAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQITGFQQILCNPNALHLPWSES*TVILSP Trigger: TGGACTCAAGATCACTGTCAACGACTCAGACCAGGG...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | CTTGTGGACTTCTATTCTCTGAAGAATAGAGAGCATTATAGATGTGTCAAGGATGGGTCCCCAGTACCATaGTCTTTTCCTGGACGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVDFYSLKNREHYRCVKDGSPVP*SFPGRS Trigger: AGAGCGTCCAGGAAAAGACAATGGTACTGGGGACCC...ATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAAGTCCACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGAACTTGGTAGCAGCCTaGGCCCTCCTGAATTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQITGFQQILCNPNALHLNLVAA*ALLNLS Trigger: GCTCAAATTCAGGAGGGCCAAGGCTGCTACCAAGTT...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | GCCAAACAGACTTGGACTGGAGCTTACTGCCTGACTCTGGTTCTTTGTGACAATTTATTGCAGTTCTCATaGGGAGAATCCTCTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AKQTWTGAYCLTLVLCDNLLQFS*GESSLS Trigger: ACTCAAAGAGGATTCTCCCAATGAGAACTGCAATAA...ATTGTCACAAAGAACCAGAGTCAGGCAGTAAGCTCCAGTCCAAGTCTGTTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | CTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCAGGATGTGGTTGGGTTaGCCTCGGTCTCCATCTATG | + |
|
Preference number: 5 (lower is better) Translates to: LLCRISLLKIITYEQDKSRMWLG*PRSPSM Trigger: CATAGATGGAGACCGAGGCAAACCCAACCACATCCT...GGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAAAGTAGGCACTGTCTGTaGGGCCACCATACTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: LCRISLLKIITYEQDKSQSRHCL*GHHTGC Trigger: GCATCCAGTATGGTGGCCCAACAGACAGTGCCTACT...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | CTTGTGGACTTCTATTCTCTGAAGAATAGAGAGCATTATAGATGTGTCAAGGATATAGAGAGCTCAAACTaGTTCTGGGGCCCACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVDFYSLKNREHYRCVKDIESSN*FWGPLS Trigger: AGAGAGTGGGCCCCAGAACAAGTTTGAGCTCTCTAT...ATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAAGTCCACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTAAGTTGAATTTGGCATaGGCTCCCTGGTCTGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLKLNLA*APWSES Trigger: CGACTCAGACCAGGGAGCCAATGCCAAATTCAACTT...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAAAGCCGTAAGTTGAATTaGGCATTGGCTCCCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLLCRISLLKIITYEQDKSRKLN*ALAPWS Trigger: AGACCAGGGAGCCAATGCCAAATTCAACTTACGGCT...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAAGAGCGGATGGAATTCTaGAGCCTAATTTCCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLCRISLLKIITYEQDKERMEF*SLISPV Trigger: CACAGGGGAAATTAGGCTCAAGAATTCCATCCGCTC...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | CCTCTGCTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATTGGGGACATTATCATaGGTGTCCAGAAGCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: PLLCRISLLKIITYEQDKLGTLS*VSRSWI Trigger: GATCCAGCTTCTGGACACCAATGATAATGTCCCCAA...TTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAGCAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAATCAATGTCAAACACGTaGACTGGCTCTGCACGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LCRISLLKIITYEQDKSQSMSNT*TGSARV Trigger: TACCCGTGCAGAGCCAGTCAACGTGTTTGACATTGA...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | CTTGTGGACTTCTATTCTCTGAAGAATAGAGAGCATTATAGATGTGTCAAGGATCCCACTCTGCTGTTATaGCAGTTCTCATTGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LVDFYSLKNREHYRCVKDPTLLL*QFSLGE Trigger: TTCTCCCAATGAGAACTGCAATAACAGCAGAGTGGG...ATCCTTGACACATCTATAATGCTCTCTATTCTTCAGAGAATAGAAGTCCACAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | CTTTGCAGGATATCCCTCCTCAAGATTATTACATATGAACAAGATAAATCCCAATCAATGGCCAGGAGCTaGAAGGTCAACAACTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LCRISLLKIITYEQDKSQSMARS*KVNNLD Trigger: GTCTAAGTTGTTGACCTTCAAGCTCCTGGCCATTGA...TTGGGATTTATCTTGTTCATATGTAATAATCTTGAGGAGGGATATCCTGCAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | TTTTCTTACCTGTTTGTATCGCTACATCCTACAAAGCTCACTGACTTTCAACTTTCTGTGATGTCGATCTaGAGTAAGGCTGTTGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: FSYLFVSLHPTKLTDFQLSVMSI*SKAVVL Trigger: CAGTACAACAGCCTTACTCAAGATCGACATCACAGA...AAGTTGAAAGTCAGTGAGCTTTGTAGGATGTAGCGATACAAACAGGTAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGTTGGGAGAATCCTCTTaGAGTATAAACTTGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQITGFQQILCNPNALHLLGESS*SINLVA Trigger: TGCTACCAAGTTTATACTCAAAGAGGATTCTCCCAA...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | AGCCAGATTACTGGCTTCCAACAAATACTTTGTAATCCTAATGCTTTGCACTTGGTGATGTTTCCAAAATaGGGATCAACAGAAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SQITGFQQILCNPNALHLVMFPK*GSTEKT Trigger: TGTCTTTTCTGTTGATCCCAATTTTGGAAACATCAC...CAAGTGCAAAGCATTAGGATTACAAAGTATTTGTTGGAAGCCAGTAATCTGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS-3UTR CAA 90 bp | GCATATAGTGTTACAACATTATACAAAATAGGGGTGACCTTGAGGGTCAGAATTTTCTCAAACTTTTGCTaGAGCTCAGACACCAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AYSVTTLYKIGVTLRVRIFSNFC*SSDTKE Trigger: TTCTTTGGTGTCTGAGCTCAAGCAAAAGTTTGAGAA...AATTCTGACCCTCAAGGTCACCCCTATTTTGTATAATGTTGTAACACTATATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 72 bp | GCCCTCCTGAATTTGAGCCACTCTATTCGAACTGTGTaGGGAGCAGGGCTGGGCCTTCTACGGAGCACACGC | + |
|
Preference number: 6 (lower is better) Translates to: ALLNLSHSIRTV*GAGLGLLRSTR Trigger: GCGTGTGCTCCGTAGAAGGCCCAGCCCTGCTCCCCACACAGTTCGAATAGAGTGGCTCAAATTCAGGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 72 bp | GCATTGGCTCCCTGGTCTGAGTCGTTGACAGTGATCTaGAGTCCACGGAGAATCTCCCCCTGGGGTGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALAPWSESLTVI*SPRRISPWGGC Trigger: GCACCCACCCCAGGGGGAGATTCTCCGTGGACTCAAGATCACTGTCAACGACTCAGACCAGGGAGCCAATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS TCA 72 bp | AACATCTTCCACATTGATGGTGACGGTGGTGGTGGCTaGGAACACCATGTCAGCCCCTCGAAGCCTGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: NIFHIDGDGGGG*EHHVSPSKPAP Trigger: GGGGGCAGGCTTCGAGGGGCTGACATGGTGTTCTCAGCCACCACCACCGTCACCATCAATGTGGAAGATGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 72 bp | CAGCCTGGAGTCTCAGCACCCCGCTGTGACGGTCCATaGAGAACTTGGAGGAGTGTAGGTTCTGAAGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QPGVSAPRCDGP*RTWRSVGSEGS Trigger: ACTCCCTTCAGAACCTACACTCCTCCAAGTTCTCCATGGACCGTCACAGCGGGGTGCTGAGACTCCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 72 bp | CCTGTATCTGGATCCACAGCTGTGACAGCCACCACGTaGGAGCCTCCTGGAGCATTCTCTGGGATCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PVSGSTAVTATT*EPPGAFSGILA Trigger: TGCCAGGATCCCAGAGAATGCTCCAGGAGGCTCCAACGTGGTGGCTGTCACAGCTGTGGATCCAGATACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS TCA 72 bp | ACACATGAGAACCTACAGGAGTGTCTTCTGGGAGGCTaGACAGGGCCATGTTCCCGTTGGTGCTGCCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: THENLQECLLGG*TGPCSRWCCPL Trigger: GAGTGGGCAGCACCAACGGGAACATGGCCCTGTTCAGCCTCCCAGAAGACACTCCTGTAGGTTCTCATGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS TCA 72 bp | GCACCTGTAGGGACCATGAGTAGTCCCCACTGGGTGTaGTGTTGTGTAGGGCCTCCAAGGAGCGGATGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: APVGTMSSPHWV*CCVGPPRSGWN Trigger: ATTCCATCCGCTCCTTGGAGGCCCTACACAACATCACACCCAGTGGGGACTACTCATGGTCCCTACAGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS GCA 72 bp | GACAGTAGGCACTGTCTGTTGGGCCACCATACTGGATaGCATTTTAGGGGGTGGTGGGAGAGCTGGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSRHCLLGHHTG*HFRGWWESWSS Trigger: AGAGCTCCAGCTCTCCCACCACCCCCTAAAATGGCATCCAGTATGGTGGCCCAACAGACAGTGCCTACTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CCA 72 bp | TGCCCACTCCATTGTCAAAGAAGTGAGGGGCAAAGTTaGCCTGGGCTAGGTAAATGCGCAGCAGCCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CPLHCQRSEGQS*PGLGKCAAAPG Trigger: TCCTGGGGCTGCTGCGCATTTACCTAGCCCAGGCCAACTTTGCCCCTCACTTCTTTGACAATGGAGTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CCA 72 bp | GGTCACTGGGACTGTGGCCTGAGCAGCTGGGCTTCCTaGAGAGTTGACCTCTGTCACCTGTACATGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GHWDCGLSSWAS*RVDLCHLYMKF Trigger: GAACTTCATGTACAGGTGACAGAGGTCAACTCTCCAGGAAGCCCAGCTGCTCAGGCCACAGTCCCAGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CCA 72 bp | TATGATGGTCACTTGGGCTTCATTCAGGACGGTCTGTaGCACCACTCGGAAGATGCCTCCAGGTCCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: YDGHLGFIQDGL*HHSEDASRSHQ Trigger: CTGGTGGGACCTGGAGGCATCTTCCGAGTGGTGCCACAGACCGTCCTGAATGAAGCCCAAGTGACCATCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CAA 90 bp | TGTGGCACCACTCGGAAGATGCCTCCAGGTCCCACCAGCCGTAAGTaGAATTTGGCATTGGCTCCCTGGTCTGAGTCGTTGACAGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: CGTTRKMPPGPTSRK*NLALAPWSESLTVI Trigger: GATCACTGTCAACGACTCAGACCAGGGAGCCAATGCCAAATTCAACTTACGGCTGGTGGGACCTGGAGGCATCTTCCGAGTGGTGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS TCA 72 bp | GGGCTTCCTGGAGAGTTGACCTCTGTCACCTGTACATaGAGTTCATACACCTCTCTTCGGAGCAGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPGELTSVTCT*SSYTSLRSRAG Trigger: CCCTGCCCTGCTCCGAAGAGAGGTGTATGAACTTCATGTACAGGTGACAGAGGTCAACTCTCCAGGAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CCA 72 bp | GACAGCCACCACGTTGGAGCCTCCTGGAGCATTCTCTaGGATCCTGGCAATGTAGTAGTGCGAGGTGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: DSHHVGASWSIL*DPGNVVVRGEL Trigger: AAGTTCACCTCGCACTACTACATTGCCAGGATCCCAGAGAATGCTCCAGGAGGCTCCAACGTGGTGGCTGTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CCA 72 bp | ATCCACAGCTGTGACAGCCACCACGTTGGAGCCTCCTaGAGCATTCTCTGGGATCCTGGCAATGTAGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: IHSCDSHHVGAS*SILWDPGNVVV Trigger: CACTACTACATTGCCAGGATCCCAGAGAATGCTCCAGGAGGCTCCAACGTGGTGGCTGTCACAGCTGTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CCA 72 bp | GATGGAATAGTGGACTTTGCCCCATGGTCCTGTATCTaGATCCACAGCTGTGACAGCCACCACGTTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DGIVDFAPWSCI*IHSCDSHHVGA Trigger: GGCTCCAACGTGGTGGCTGTCACAGCTGTGGATCCAGATACAGGACCATGGGGCAAAGTCCACTATTCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CCA 72 bp | CCCGGTCCCATAGATGGAATAGTGGACTTTGCCCCATaGTCCTGTATCTGGATCCACAGCTGTGACAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGPIDGIVDFAP*SCIWIHSCDSH Trigger: GTGGCTGTCACAGCTGTGGATCCAGATACAGGACCATGGGGCAAAGTCCACTATTCCATCTATGGGACCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CAA 72 bp | ACTCGGAAGATGCCTCCAGGTCCCACCAGCCGTAAGTaGAATTTGGCATTGGCTCCCTGGTCTGAGTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TRKMPPGPTSRK*NLALAPWSESL Trigger: CAACGACTCAGACCAGGGAGCCAATGCCAAATTCAACTTACGGCTGGTGGGACCTGGAGGCATCTTCCGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CCA 72 bp | CAGCCAGTACACCTACGGCTTTCATGGGATTGTCCTTaGTCTGAATCAGGAAGGCAGCCATGGAACCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QPVHLRLSWDCP*SESGRQPWNLW Trigger: CCAGAGGTTCCATGGCTGCCTTCCTGATTCAGACCAAGGACAATCCCATGAAAGCCGTAGGTGTACTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CAA 72 bp | CCTCCAGGTCCCACCAGCCGTAAGTTGAATTTGGCATaGGCTCCCTGGTCTGAGTCGTTGACAGTGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PPGPTSRKLNLA*APWSESLTVIL Trigger: CAAGATCACTGTCAACGACTCAGACCAGGGAGCCAATGCCAAATTCAACTTACGGCTGGTGGGACCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
||
| CDS CAA 72 bp | AAGATGCCTCCAGGTCCCACCAGCCGTAAGTTGAATTaGGCATTGGCTCCCTGGTCTGAGTCGTTGACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KMPPGPTSRKLN*ALAPWSESLTV Trigger: CACTGTCAACGACTCAGACCAGGGAGCCAATGCCAAATTCAACTTACGGCTGGTGGGACCTGGAGGCATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS TCA 72 bp | TCAAACTTTTGCTTGAGCTCAGACACCAAAGAAGACTaGACGGGGCCTCCCAGGGTCTTGGGTGTGGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: SNFCLSSDTKED*TGPPRVLGVGN Trigger: GTTACCCACACCCAAGACCCTGGGAGGCCCCGTTCAGTCTTCTTTGGTGTCTGAGCTCAAGCAAAAGTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS GCA 72 bp | TCTCATTCAAGAGCCTGTAGAGGATGTGGTTGGGTTTaGCTCGGTCTCCATCTATGGCAACCACCGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SHSRACRGCGWV*LGLHLWQPPSA Trigger: TGCTGACGGTGGTTGCCATAGATGGAGACCGAGGCAAACCCAACCACATCCTCTACAGGCTCTTGAATGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 72 bp | AAACTTGTTCTGGGGCCCACTCTCTCCATAGAAGGTTaGAGGGTGGTTGTTGAGGTCCACGATCCTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: KLVLGPTLSIEG*RVVVEVHDPDG Trigger: ACCATCAGGATCGTGGACCTCAACAACCACCCTCCAACCTTCTATGGAGAGAGTGGGCCCCAGAACAAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 72 bp | TCAATGGCAGCTGAGTTTTCCACTATGATGGTCACTTaGGCTTCATTCAGGACGGTCTGTGGCACCACTCGG | + |
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Preference number: 6 (lower is better) Translates to: SMAAEFSTMMVT*ASFRTVCGTTR Trigger: CCGAGTGGTGCCACAGACCGTCCTGAATGAAGCCCAAGTGACCATCATAGTGGAAAACTCAGCTGCCATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 90 bp | TTGAATTTGGCATTGGCTCCCTGGTCTGAGTCGTTGACAGTGATCTaGAGTCCACGGAGAATCTCCCCCTGGGGTGGGTGCTCAAACATA | + |
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Preference number: 6 (lower is better) Translates to: LNLALAPWSESLTVI*SPRRISPWGGCSNI Trigger: TATGTTTGAGCACCCACCCCAGGGGGAGATTCTCCGTGGACTCAAGATCACTGTCAACGACTCAGACCAGGGAGCCAATGCCAAATTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 90 bp | TCCTCTTTGAGTATAAACTTGGTAGCAGCCTTGGCCCTCCTGAATTaGAGCCACTCTATTCGAACTGTGTGGGGAGCAGGGCTGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: SSLSINLVAALALLN*SHSIRTVWGAGLGL Trigger: AAGGCCCAGCCCTGCTCCCCACACAGTTCGAATAGAGTGGCTCAAATTCAGGAGGGCCAAGGCTGCTACCAAGTTTATACTCAAAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 90 bp | GCCATGGAACCTCTGGATAGCCTCTCTGTATCTGTGATGTCGATCTaGAGTAAGGCTGTTGTACTGAAAGATGGGGAGCCTCGGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: AMEPLDSLSVSVMSI*SKAVVLKDGEPRSL Trigger: CAAGGACCGAGGCTCCCCATCTTTCAGTACAACAGCCTTACTCAAGATCGACATCACAGATACAGAGAGGCTATCCAGAGGTTCCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS TCA 72 bp | AGTTCATACACCTCTCTTCGGAGCAGGGCAGGGCTCTaGAGGACGGAGATGGCTCCAGATGTCTCATTAATT | + |
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Preference number: 6 (lower is better) Translates to: SSYTSLRSRAGL*RTEMAPDVSLI Trigger: AATTAATGAGACATCTGGAGCCATCTCCGTCCTTCAGAGCCCTGCCCTGCTCCGAAGAGAGGTGTATGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS GCA 72 bp | AGCCGTGGAGATGAGGACAGTTATGGCCACAACAATTaGCATGACACCAGCCAGTACACCTACGGCTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SRGDEDSYGHNN*HDTSQYTYGFH Trigger: ATGAAAGCCGTAGGTGTACTGGCTGGTGTCATGGCAATTGTTGTGGCCATAACTGTCCTCATCTCCACGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 72 bp | AGTGATCTTGAGTCCACGGAGAATCTCCCCCTGGGGTaGGTGCTCAAACATAGAGAGCTCAAACTTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SDLESTENLPLG*VLKHRELKLVL Trigger: CAGAACAAGTTTGAGCTCTCTATGTTTGAGCACCCACCCCAGGGGGAGATTCTCCGTGGACTCAAGATCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 72 bp | TTGACAGTGATCTTGAGTCCACGGAGAATCTCCCCCTaGGGTGGGTGCTCAAACATAGAGAGCTCAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: LTVILSPRRISP*GGCSNIESSNL Trigger: CAAGTTTGAGCTCTCTATGTTTGAGCACCCACCCCAGGGGGAGATTCTCCGTGGACTCAAGATCACTGTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 72 bp | AGTATAAACTTGGTAGCAGCCTTGGCCCTCCTGAATTaGAGCCACTCTATTCGAACTGTGTGGGGAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SINLVAALALLN*SHSIRTVWGAG Trigger: CCCTGCTCCCCACACAGTTCGAATAGAGTGGCTCAAATTCAGGAGGGCCAAGGCTGCTACCAAGTTTATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 90 bp | CTGGGTGTGATGTTGTGTAGGGCCTCCAAGGAGCGGATGGAATTCTaGAGCCTAATTTCCCCTGTGTGTGCATCAATGTCAAACACGTTG | + |
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Preference number: 6 (lower is better) Translates to: LGVMLCRASKERMEF*SLISPVCASMSNTL Trigger: CAACGTGTTTGACATTGATGCACACACAGGGGAAATTAGGCTCAAGAATTCCATCCGCTCCTTGGAGGCCCTACACAACATCACACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS TCA 72 bp | TGTCCAGAAGCTGGATCACAATGTCTGCTGTGGAACTaGACTTCTCTGGGGTGTTCACTTCAATGGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CPEAGSQCLLWN*TSLGCSLQWPG Trigger: TCCTGGCCATTGAAGTGAACACCCCAGAGAAGTTCAGTTCCACAGCAGACATTGTGATCCAGCTTCTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 72 bp | GGTGAATTAAGAACAGGTCTGACCCGGTCCCATAGATaGAATAGTGGACTTTGCCCCATGGTCCTGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: GELRTGLTRSHR*NSGLCPMVLYL Trigger: CAGATACAGGACCATGGGGCAAAGTCCACTATTCCATCTATGGGACCGGGTCAGACCTGTTCTTAATTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 72 bp | ATGTTGTGTAGGGCCTCCAAGGAGCGGATGGAATTCTaGAGCCTAATTTCCCCTGTGTGTGCATCAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: MLCRASKERMEF*SLISPVCASMS Trigger: TGACATTGATGCACACACAGGGGAAATTAGGCTCAAGAATTCCATCCGCTCCTTGGAGGCCCTACACAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 72 bp | CCTCTGGATAGCCTCTCTGTATCTGTGATGTCGATCTaGAGTAAGGCTGTTGTACTGAAAGATGGGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PLDSLSVSVMSI*SKAVVLKDGEP Trigger: AGGCTCCCCATCTTTCAGTACAACAGCCTTACTCAAGATCGACATCACAGATACAGAGAGGCTATCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 72 bp | GCTCTTGGGGGCACCATGACTCCCACTCTGCTGTTATaGCAGTTCTCATTGGGAGAATCCTCTTTGAGTATA | + |
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Preference number: 6 (lower is better) Translates to: ALGGTMTPTLLL*QFSLGESSLSI Trigger: TATACTCAAAGAGGATTCTCCCAATGAGAACTGCAATAACAGCAGAGTGGGAGTCATGGTGCCCCCAAGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 90 bp | AGAGCTGGAGCTCTTGGGGGCACCATGACTCCCACTCTGCTGTTATaGCAGTTCTCATTGGGAGAATCCTCTTTGAGTATAAACTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: RAGALGGTMTPTLLL*QFSLGESSLSINLV Trigger: TACCAAGTTTATACTCAAAGAGGATTCTCCCAATGAGAACTGCAATAACAGCAGAGTGGGAGTCATGGTGCCCCCAAGAGCTCCAGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 90 bp | TTCTCATTGGGAGAATCCTCTTTGAGTATAAACTTGGTAGCAGCCTaGGCCCTCCTGAATTTGAGCCACTCTATTCGAACTGTGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: FSLGESSLSINLVAA*ALLNLSHSIRTVWG Trigger: TCCCCACACAGTTCGAATAGAGTGGCTCAAATTCAGGAGGGCCAAGGCTGCTACCAAGTTTATACTCAAAGAGGATTCTCCCAATGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 90 bp | ACTCCCACTCTGCTGTTATTGCAGTTCTCATTGGGAGAATCCTCTTaGAGTATAAACTTGGTAGCAGCCTTGGCCCTCCTGAATTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: TPTLLLLQFSLGESS*SINLVAALALLNLS Trigger: GCTCAAATTCAGGAGGGCCAAGGCTGCTACCAAGTTTATACTCAAAGAGGATTCTCCCAATGAGAACTGCAATAACAGCAGAGTGGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 72 bp | CAGTTCTCATTGGGAGAATCCTCTTTGAGTATAAACTaGGTAGCAGCCTTGGCCCTCCTGAATTTGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: QFSLGESSLSIN*VAALALLNLSH Trigger: GTGGCTCAAATTCAGGAGGGCCAAGGCTGCTACCAAGTTTATACTCAAAGAGGATTCTCCCAATGAGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS GCA 72 bp | ATTATCATTGGTGTCCAGAAGCTGGATCACAATGTCTaGTGTGGAACTGAACTTCTCTGGGGTGTTCACTTC | + |
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Preference number: 6 (lower is better) Translates to: IIIGVQKLDHNV*CGTELLWGVHF Trigger: GAAGTGAACACCCCAGAGAAGTTCAGTTCCACAGCAGACATTGTGATCCAGCTTCTGGACACCAATGATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CCA 72 bp | GTGAACTTGGGGACATTATCATTGGTGTCCAGAAGCTaGATCACAATGTCTGCTGTGGAACTGAACTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VNLGTLSLVSRS*ITMSAVELNFS Trigger: AGAGAAGTTCAGTTCCACAGCAGACATTGTGATCCAGCTTCTGGACACCAATGATAATGTCCCCAAGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 72 bp | GGAGAATCCTCTTTGAGTATAAACTTGGTAGCAGCCTaGGCCCTCCTGAATTTGAGCCACTCTATTCGAACT | + |
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Preference number: 6 (lower is better) Translates to: GESSLSINLVAA*ALLNLSHSIRT Trigger: AGTTCGAATAGAGTGGCTCAAATTCAGGAGGGCCAAGGCTGCTACCAAGTTTATACTCAAAGAGGATTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS CAA 90 bp | CTGTTATTGCAGTTCTCATTGGGAGAATCCTCTTTGAGTATAAACTaGGTAGCAGCCTTGGCCCTCCTGAATTTGAGCCACTCTATTCGA | + |
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Preference number: 6 (lower is better) Translates to: LLLQFSLGESSLSIN*VAALALLNLSHSIR Trigger: TCGAATAGAGTGGCTCAAATTCAGGAGGGCCAAGGCTGCTACCAAGTTTATACTCAAAGAGGATTCTCCCAATGAGAACTGCAATAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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| CDS TCA 72 bp | GGTCAACAACTTAGACTTTTCAAAGTCAATGGCAGCTaGGTTTTCCACTATGATGGTCACTTGGGCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: GQQLRLFKVNGS*VFHYDGHLGFI Trigger: AATGAAGCCCAAGTGACCATCATAGTGGAAAACTCAGCTGCCATTGACTTTGAAAAGTCTAAGTTGTTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022337.11 |
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