Pregenerated sensors for CDH9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025370Ensembl transcript IDs: ENSMUST00000026432.8, ENSMUST00000228307.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACCACTCAATCTGGTATaGAAGATACTGTTTCTACTA | + |
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Preference number: 3 (lower is better) Translates to: SFILIHRNLLIKQTLTRTPLNLV*KILFLL Trigger: TAGTAGAAACAGTATCTTCAATACCAGATTGAGTGG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCCACTCAATCTGGTATaGAAGATACTGTTTCTACTA | + |
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Preference number: 3 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCPLNLV*KILFLL Trigger: TAGTAGAAACAGTATCTTCAATACCAGATTGAGTGG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCCCTGTGCTCAGGCCTaGAGCAAGCATCAGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCPCAQA*SKHQGL Trigger: GAGGCCCTGATGCTTGCTGCAGGCCTGAGCACAGGG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACGCACACACGGATCGTaGGTGTGCCAGTGCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTRTHGS*VCQCCF Trigger: AAAGCAGCACTGGCACACTCACGATCCGTGTGTGCG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCGCACACACGGATCGTaGGTGTGCCAGTGCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCRTHGS*VCQCCF Trigger: AAAGCAGCACTGGCACACTCACGATCCGTGTGTGCG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACCCCAGGTTATCGCATaGGCACACACGGATCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTPQVIA*AHTDRE Trigger: CTCACGATCCGTGTGTGCGCATGCGATAACCTGGGG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTTGTTCACTGTGGTGGTaGCAGAGAGGCCTCCCATCT | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCCSLWW*QRGLPS Trigger: AGATGGGAGGCCTCTCTGGCACCACCACAGTGAACA...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAGTTATGCCAAGGGGATaGTTCCCGATCCAGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTVMPRG*FPIQGF Trigger: AAACCCCTGGATCGGGAATCATCCCCTTGGCATAAC...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTGTTATGCCAAGGGGATaGTTCCCGATCCAGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCVMPRG*FPIQGF Trigger: AAACCCCTGGATCGGGAATCATCCCCTTGGCATAAC...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTTCCGCATTGCAGGACTaGATGTTCCCCAGGTTATCG | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCSALQD*MFPRLS Trigger: CGATAACCTGGGGAACATGCAGTCCTGCAATGCGGA...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACCACGCTTGGCACGATaGAGCATTTTACCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTPRLAR*SILPSS Trigger: GGATGAGGGTAAAATGCTCCATCGTGCCAAGCGTGG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTTCTAAGAGGAAGAACTaGTTCCACATCCAGCCACGC | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCSKRKN*FHIQPR Trigger: GCGTGGCTGGATGTGGAATCAGTTCTTCCTCTTAGA...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACCGGACGTCATCCTTTaGAATGATCAGAGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTPDVIL*NDQRLL Trigger: AAGGAGCCTCTGATCATTTCAAAGGATGACGTCCGG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACGGTGCACTTGGGTCTaGGTCGTTTTCTTTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTRCTWV*VVFFQS Trigger: AGACTGAAAGAAAACGACTCAGACCCAAGTGCACCG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCGGTGCACTTGGGTCTaGGTCGTTTTCTTTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCRCTWV*VVFFQS Trigger: AGACTGAAAGAAAACGACTCAGACCCAAGTGCACCG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCCCATGTCCTTAGCCTaGATAACAACTTGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCPMSLA*ITTWYC Trigger: GCAGTACCAAGTTGTTATTCAGGCTAAGGACATGGG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACCCATGTCCTTAGCCTaGATAACAACTTGGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTPMSLA*ITTWYC Trigger: GCAGTACCAAGTTGTTATTCAGGCTAAGGACATGGG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTTTTATCCTTCCAAGATaGGTTCCAAGAGGTGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCFILPR*VPRGAD Trigger: GTCGGCACCTCTTGGAACTCATCTTGGAAGGATAAA...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACATTTATCCTTCCAAGATaGGTTCCAAGAGGTGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTFILPR*VPRGAD Trigger: GTCGGCACCTCTTGGAACTCATCTTGGAAGGATAAA...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCTTCTCCTTCTGCAATaGTATATTCCAGCTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCLLLLQ*YIPARR Trigger: ACGCCGAGCTGGAATATAGCATTGCAGAAGGAGAAG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACTTCTCCTTCTGCAATaGTATATTCCAGCTCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTLLLLQ*YIPARR Trigger: ACGCCGAGCTGGAATATAGCATTGCAGAAGGAGAAG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAGGCTCCTTTTTCCGTTaGCTCTTCAATGCAGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTGSFFR*LFNAAN Trigger: GTTTGCTGCATTGAAGAGGCAACGGAAAAAGGAGCC...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTGGCTCCTTTTTCCGTTaGCTCTTCAATGCAGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCGSFFR*LFNAAN Trigger: GTTTGCTGCATTGAAGAGGCAACGGAAAAAGGAGCC...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACCGGATTCCTTAATGTaGCGATGTCAAAAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTPDSLM*RCQKPV Trigger: CACAGGCTTTTGACATCGGCACATTAAGGAATCCGG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAGTTCTCCCCCATGTCTaGGTCATTGGCTTTTATCCT | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTVLPHV*VIGFYP Trigger: AGGATAAAAGCCAATGACCCAGACATGGGGGAGAAC...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAATCCTTCTCAGGAAGTaGCTGCTATCCTTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTILLRK*LLSFPC Trigger: ACAAGGAAAGGATAGCAGTCACTTCCTGAGAAGGAT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTATCCTTCTCAGGAAGTaGCTGCTATCCTTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCILLRK*LLSFPC Trigger: ACAAGGAAAGGATAGCAGTCACTTCCTGAGAAGGAT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCGTCATCCTTTGAAATaGTCAGAGGCTCCTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCRHPLK*SEAPFS Trigger: GGAAAAAGGAGCCTCTGATCATTTCAAAGGATGACG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTATGCAGTCTTTATTATaGCTGATTCCGGGTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCMQSLL*LIPGPL Trigger: CAGTGGACCCGGAATCAGGCATAATAAAGACTGCAT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAATGCAGTCTTTATTATaGCTGATTCCGGGTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTMQSLL*LIPGPL Trigger: CAGTGGACCCGGAATCAGGCATAATAAAGACTGCAT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTGCTCTTTGTTTTCTCTaGTCATGTCTGGCAATGCAG | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCALCFL*SCLAMQ Trigger: CTGCATTGCCAGACATGAGCAGAGAAAACAAAGAGC...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAGTAATGGTGATGTTATaGCAAGGGGATGATTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTVMVML*QGDDSR Trigger: TCGGGAATCATCCCCTTGGCATAACATCACCATTAC...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTGTAATGGTGATGTTATaGCAAGGGGATGATTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCVMVML*QGDDSR Trigger: TCGGGAATCATCCCCTTGGCATAACATCACCATTAC...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTAATCGAGGATCAGGGTaGGTATTACTTGCATCCACT | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCNRGSG*VLLAST Trigger: AGTGGATGCAAGTAATACCCACCCTGATCCTCGATT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCGGTCCATATCAGTATaGCGGTCCACAGAGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCRSISV*RSTEYF Trigger: AAAATACTCTGTGGACCGCCATACTGATATGGACCG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACGGTCCATATCAGTATaGCGGTCCACAGAGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTRSISV*RSTEYF Trigger: AAAATACTCTGTGGACCGCCATACTGATATGGACCG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| 3UTR CAA 72 bp | TCCAAAAAGGGACAACACAGGCCACTCAATCTGGTATaGAAGATACTGTTTCTACTAATGTTGATGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SKKGQHRPLNLV*KILFLLMLMKS Trigger: TGACTTCATCAACATTAGTAGAAACAGTATCTTCAATACCAGATTGAGTGGCCTGTGTTGTCCCTTTTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAAAATGCAAGTCCAGATaGCCAGTTGAAGACAACTGT | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTKCKSR*PVEDNC Trigger: ACAGTTGTCTTCAACTGGTCATCTGGACTTGCATTT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTAAATGCAAGTCCAGATaGCCAGTTGAAGACAACTGT | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCKCKSR*PVEDNC Trigger: ACAGTTGTCTTCAACTGGTCATCTGGACTTGCATTT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCACATCAAACATGTCTaGTCCTTCTCCTTCTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCHIKHV*SFSFCN Trigger: ATTGCAGAAGGAGAAGGATCAGACATGTTTGATGTG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACACATCAAACATGTCTaGTCCTTCTCCTTCTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTHIKHV*SFSFCN Trigger: ATTGCAGAAGGAGAAGGATCAGACATGTTTGATGTG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAGAACCATTTTCTGAGTaGATACTGAAAACTCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTEPFSE*ILKTRS Trigger: GGACCGAGTTTTCAGTATTCACTCAGAAAATGGTTC...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTATAGTTAGCATCATCTaGATCGGTGGCAGTTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCIVSII*IGGSYL Trigger: CAAGTAACTGCCACCGATGCAGATGATGCTAACTAT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAATAGTTAGCATCATCTaGATCGGTGGCAGTTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTIVSII*IGGSYL Trigger: CAAGTAACTGCCACCGATGCAGATGATGCTAACTAT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAATGAGTTCCAAGAGGTaGCGACTCCAGAGAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTMSSKR*RLQRIK Trigger: TTTAATTCTCTGGAGTCGGCACCTCTTGGAACTCAT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTATGAGTTCCAAGAGGTaGCGACTCCAGAGAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCMSSKR*RLQRIK Trigger: TTTAATTCTCTGGAGTCGGCACCTCTTGGAACTCAT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAAGGTGTTCATTTTGTTaGGGCTGTACCCATCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTRCSFC*GCTHLF Trigger: GAAAAGATGGGTACAGCCGCAACAAAATGAACACCT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTAGGTGTTCATTTTGTTaGGGCTGTACCCATCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCRCSFC*GCTHLF Trigger: GAAAAGATGGGTACAGCCGCAACAAAATGAACACCT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCCATGTCTGGGTCATTaGCTTTTATCCTTCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCPCLGH*LLSFQD Trigger: ATCTTGGAAGGATAAAAGCCAATGACCCAGACATGG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAAGGAAATTCTGGCACTaGCTCAAAGAAGAACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTRKFWH*LKEELV Trigger: CACAAGTTCTTCTTTGAGCCAGTGCCAGAATTTCCT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTAGTCTCTTTGCAGCGTaGATATCTCCTGTATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCSLFAA*ISPVFS Trigger: TGAAAATACAGGAGATATTCACGCTGCAAAGAGACT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAAGTCTCTTTGCAGCGTaGATATCTCCTGTATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTSLFAA*ISPVFS Trigger: TGAAAATACAGGAGATATTCACGCTGCAAAGAGACT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR TCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTTTTCTGAGTGAATACTaGAAACTCGGTCCATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCFLSEY*KLGPYQ Trigger: CTGATATGGACCGAGTTTTCAGTATTCACTCAGAAA...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR TCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACATTTCTGAGTGAATACTaGAAACTCGGTCCATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTFLSEY*KLGPYQ Trigger: CTGATATGGACCGAGTTTTCAGTATTCACTCAGAAA...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACTGTTGTCAACCATATaGAAAATGCAAGTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTLLSTI*KMQVQM Trigger: CATCTGGACTTGCATTTTCCATATGGTTGACAACAG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCTGTTGTCAACCATATaGAAAATGCAAGTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCLLSTI*KMQVQM Trigger: CATCTGGACTTGCATTTTCCATATGGTTGACAACAG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR GCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTATAACAACTTGGTACTaGTCTTTGTTTTCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCITTWY*SLFSLL Trigger: GAGCAGAGAAAACAAAGAGCAGTACCAAGTTGTTAT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAATAACAACTTGGTACTaGTCTTTGTTTTCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTITTWY*SLFSLL Trigger: GAGCAGAGAAAACAAAGAGCAGTACCAAGTTGTTAT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTTTCTCTGCTCATGTCTaGCAATGCAGTCTTTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCFSAHV*QCSLYY Trigger: ATAATAAAGACTGCATTGCCAGACATGAGCAGAGAA...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACATTCTCTGCTCATGTCTaGCAATGCAGTCTTTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTFSAHV*QCSLYY Trigger: ATAATAAAGACTGCATTGCCAGACATGAGCAGAGAA...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTTTGGCTACTTTGTTTTaGGTTATTTATCTCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCLATLF*VIYLCG Trigger: GCCACAGAGATAAATAACCCAAAACAAAGTAGCCAA...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACATTGGCTACTTTGTTTTaGGTTATTTATCTCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTLATLF*VIYLCG Trigger: GCCACAGAGATAAATAACCCAAAACAAAGTAGCCAA...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTGTAAGTGGCAAATTCTaGAGCATGATCATTTATATC | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCVSGKF*SMIIYI Trigger: GATATAAATGATCATGCTCCAGAATTTGCCACTTAC...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTATGTTTCATAGTAAGTaGCAAATTCTGGAGCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCMFHSK*QILEHD Trigger: ATCATGCTCCAGAATTTGCCACTTACTATGAAACAT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAATGTTTCATAGTAAGTaGCAAATTCTGGAGCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFILIHRNLLIKQTLTRTMFHSK*QILEHD Trigger: ATCATGCTCCAGAATTTGCCACTTACTATGAAACAT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS GCA 90 bp | GTGCTCAGGCCTGCAGCAAGCATCAGGGCCTCCGCATTGCAGGACTaGATGTTCCCCAGGTTATCGCATGCGCACACACGGATCGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VLRPAASIRASALQD*MFPRLSHAHTRIVS Trigger: ACTCACGATCCGTGTGTGCGCATGCGATAACCTGGGGAACATGCAGTCCTGCAATGCGGAGGCCCTGATGCTTGCTGCAGGCCTGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS CCA 90 bp | CAATGCTATATTCCAGCTCGGCGTTCTCCCCCATGTCTGGGTCATTaGCTTTTATCCTTCCAAGATGAGTTCCAAGAGGTGCCGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QCYIPARRSPPCLGH*LLSFQDEFQEVPTP Trigger: TGGAGTCGGCACCTCTTGGAACTCATCTTGGAAGGATAAAAGCCAATGACCCAGACATGGGGGAGAACGCCGAGCTGGAATATAGCATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CCA 90 bp | TCCTTCTGCAATGCTATATTCCAGCTCGGCGTTCTCCCCCATGTCTaGGTCATTGGCTTTTATCCTTCCAAGATGAGTTCCAAGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SFCNAIFQLGVLPHV*VIGFYPSKMSSKRC Trigger: GCACCTCTTGGAACTCATCTTGGAAGGATAAAAGCCAATGACCCAGACATGGGGGAGAACGCCGAGCTGGAATATAGCATTGCAGAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS GCA 90 bp | GTCTGGGTCATTGGCTTTTATCCTTCCAAGATGAGTTCCAAGAGGTaGCGACTCCAGAGAATTAAACTGATAAGTGCTCTGTGGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: VWVIGFYPSKMSSKR*RLQRIKLISALWEP Trigger: CGGTTCCCACAGAGCACTTATCAGTTTAATTCTCTGGAGTCGGCACCTCTTGGAACTCATCTTGGAAGGATAAAAGCCAATGACCCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAATCAGGGCCTCCGCATaGCAGGACTGCATGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTIRASA*QDCMFP Trigger: GGGGAACATGCAGTCCTGCAATGCGGAGGCCCTGAT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS TCA 90 bp | CGTCATTATAGGTCACAATATTGTCCCGGACGTCATCCTTTGAAATaGTCAGAGGCTCCTTTTTCCGTTGCCTCTTCAATGCAGCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RHYRSQYCPGRHPLK*SEAPFSVASSMQQT Trigger: TGTTTGCTGCATTGAAGAGGCAACGGAAAAAGGAGCCTCTGATCATTTCAAAGGATGACGTCCGGGACAATATTGTGACCTATAATGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS GCA 90 bp | GTCCACAGAGTATTTTATTATGTTGTTCATGGCATCTGGGTCATATaGTGTGACTTGTCCGATGATGCTCCCCTCCTTCACATCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VHRVFYYVVHGIWVI*CDLSDDAPLLHIFI Trigger: GATGAAGATGTGAAGGAGGGGAGCATCATCGGACAAGTCACAGCATATGACCCAGATGCCATGAACAACATAATAAAATACTCTGTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCGTAGGGCGGTGCACTaGGGTCTGAGTCGTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCRRAVH*GLSRFL Trigger: AAGAAAACGACTCAGACCCAAGTGCACCGCCCTACG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCACATCCAGCCACGCTaGGCACGATGGAGCATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCHIQPR*ARWSIL Trigger: TAAAATGCTCCATCGTGCCAAGCGTGGCTGGATGTG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAGGGAACCGAGGAGGGTaGTTGTTGACATCTGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTGNRGG*LLTSVR Trigger: CCTAACAGATGTCAACAACAACCCTCCTCGGTTCCC...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS CCA 90 bp | GCTGAGTCTTTGAAAGGTCCAAGGTGTAAGAATCGAGGATCAGGGTaGGTATTACTTGCATCCACTCTTAAAGTGTACAACATTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AESLKGPRCKNRGSG*VLLASTLKVYNIFF Trigger: AAAGAAAATGTTGTACACTTTAAGAGTGGATGCAAGTAATACCCACCCTGATCCTCGATTCTTACACCTTGGACCTTTCAAAGACTCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACGAGGAGGGTTGTTGTaGACATCTGTTAGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTRGGLL*TSVRVM Trigger: CATCACCCTAACAGATGTCAACAACAACCCTCCTCG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAAACCGAGGAGGGTTGTaGTTGACATCTGTTAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTNRGGL*LTSVRV Trigger: CACCCTAACAGATGTCAACAACAACCCTCCTCGGTT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAGGCTCAAAGAAGAACTaGTGTCCTCGAGGAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTGSKKN*CPRGGS Trigger: TGATCCTCCTCGAGGACACAAGTTCTTCTTTGAGCC...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTGGCTCAAAGAAGAACTaGTGTCCTCGAGGAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCGSKKN*CPRGGS Trigger: TGATCCTCCTCGAGGACACAAGTTCTTCTTTGAGCC...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTATTTCTGCGAGTTTTTaGAACCGAGGTCCCCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCISASF*NRGPQS Trigger: CGACTGGGGACCTCGGTTCAAAAAACTCGCAGAAAT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS GCA 90 bp | TACCCTCATCCTTTTTCAGATTCACTATCCTTCTCAGGAAGTGACTaGTATCCTTTCCTTGTAATGTGCTGTTGTCAACCATATGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YPHPFSDSLSFSGSD*YPFLVMCCCQPYGK Trigger: TTTTCCATATGGTTGACAACAGCACATTACAAGGAAAGGATAGCAGTCACTTCCTGAGAAGGATAGTGAATCTGAAAAAGGATGAGGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCTCTGTCTAGTCTCTTaGCAGCGTGAATATCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCLCLVS*QREYLL Trigger: CAGGAGATATTCACGCTGCAAAGAGACTAGACAGAG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACCCATGTCTGGGTCATaGGCTTTTATCCTTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTPMSGS*AFILPR Trigger: TCTTGGAAGGATAAAAGCCAATGACCCAGACATGGG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCCCATGTCTGGGTCATaGGCTTTTATCCTTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCPMSGS*AFILPR Trigger: TCTTGGAAGGATAAAAGCCAATGACCCAGACATGGG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAAGGCTCCTTTTTCCGTaGCCTCTTCAATGCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTRLLFP*PLQCSK Trigger: TTTGCTGCATTGAAGAGGCAACGGAAAAAGGAGCCT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAAGTCCAGATGACCAGTaGAAGACAACTGTAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTSPDDQ*KTTVSP Trigger: AGGACTTACAGTTGTCTTCAACTGGTCATCTGGACT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACATCTATAACAAACAGATaGCCAGCTCCATCTCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTSITNR*PAPSPV Trigger: GACAGGAGATGGAGCTGGCAATCTGTTTGTTATAGA...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCAGGGTGGGTATTACTaGCATCCACTCTTAAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCQGGYY*HPLLKC Trigger: ACACTTTAAGAGTGGATGCAAGTAATACCCACCCTG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAAAGGAGCTGAGAGAATaGGCAACAGAATCATTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTKELRE*ATESFP Trigger: AGGGAATGATTCTGTTGCCAATTCTCTCAGCTCCTT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTAAGGAGCTGAGAGAATaGGCAACAGAATCATTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCKELRE*ATESFP Trigger: AGGGAATGATTCTGTTGCCAATTCTCTCAGCTCCTT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACATTTCTGTCTATAGCCTaGGCACGAAGAATGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTFLSIA*ARRMYR Trigger: TCTGTACATTCTTCGTGCCAAGGCTATAGACAGAAA...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTTTTCTGTCTATAGCCTaGGCACGAAGAATGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCFLSIA*ARRMYR Trigger: TCTGTACATTCTTCGTGCCAAGGCTATAGACAGAAA...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCCTTCCTGTGTATCTTaGTCAGTGATCACATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCPSCVS*SVITSN Trigger: GTTTGATGTGATCACTGACAAAGATACACAGGAAGG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTGTTTACTGTCTTCTCTaGCTTCCGGATTCCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCVYCLL*LPDSLM Trigger: CATTAAGGAATCCGGAAGCAAGAGAAGACAGTAAAC...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACCTTGTAATGTGCTGTaGTCAACCATATGGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTPCNVL*STIWKM Trigger: CATTTTCCATATGGTTGACAACAGCACATTACAAGG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCCTTGTAATGTGCTGTaGTCAACCATATGGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCPCNVL*STIWKM Trigger: CATTTTCCATATGGTTGACAACAGCACATTACAAGG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTAGCCTGAATAACAACTaGGTACTGCTCTTTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCSLNNN*VLLFVF Trigger: GAAAACAAAGAGCAGTACCAAGTTGTTATTCAGGCT...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAAGCCTGAATAACAACTaGGTACTGCTCTTTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTSLNNN*VLLFVF Trigger: GAAAACAAAGAGCAGTACCAAGTTGTTATTCAGGCT...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAGATGAAGACAGGAATTaGGCTACTTTGTTTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTDEDRN*ATLFWV Trigger: AACCCAAAACAAAGTAGCCAAATTCCTGTCTTCATC...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACATGACACTTATAGTTaGAATCAACTGGCCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTHDTYS*NQLARL Trigger: AAGTCTGGCCAGTTGATTCAAACTATAAGTGTCATG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCATGACACTTATAGTTaGAATCAACTGGCCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCHDTYS*NQLARL Trigger: AAGTCTGGCCAGTTGATTCAAACTATAAGTGTCATG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTGAGTATTTTATTATGTaGTTCATGGCATCTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCEYFIM*FMASGS Trigger: TGACCCAGATGCCATGAACAACATAATAAAATACTC...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTTTTGGCTACTTTGTTTaGGGTTATTTATCTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCFGYFV*GYLSLW Trigger: CCACAGAGATAAATAACCCAAAACAAAGTAGCCAAA...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACATTTGGCTACTTTGTTTaGGGTTATTTATCTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTFGYFV*GYLSLW Trigger: CCACAGAGATAAATAACCCAAAACAAAGTAGCCAAA...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACAACACTTATGTATTGTCCGGTGTATAAAATCTaGTACGTCAATATTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HRNLLIKQTLTRTTLMYCPVYKI*YVNIFP Trigger: TGGGAAAATATTGACGTACAAGATTTTATACACCGG...ACAATACATAAGTGTTGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS-3UTR CAA 90 bp | TCATTCATACTCATTCACAGAAACTTACTGATTAAGCAAACCCTTACTAGGACACCGGTGTATAAAATCTaGTACGTCAATATTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFILIHRNLLIKQTLTRTPVYKI*YVNIFP Trigger: TGGGAAAATATTGACGTACAAGATTTTATACACCGG...TGTCCTAGTAAGGGTTTGCTTAATCAGTAAGTTTCTGTGAATGAGTATGAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CCA 72 bp | ATTCCAGCTCGGCGTTCTCCCCCATGTCTGGGTCATTaGCTTTTATCCTTCCAAGATGAGTTCCAAGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IPARRSPPCLGH*LLSFQDEFQEV Trigger: CACCTCTTGGAACTCATCTTGGAAGGATAAAAGCCAATGACCCAGACATGGGGGAGAACGCCGAGCTGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS TCA 72 bp | CCCATGTCTGGGTCATTGGCTTTTATCCTTCCAAGATaGGTTCCAAGAGGTGCCGACTCCAGAGAATTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PMSGSLAFILPR*VPRGADSRELN Trigger: GTTTAATTCTCTGGAGTCGGCACCTCTTGGAACTCATCTTGGAAGGATAAAAGCCAATGACCCAGACATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CAA 72 bp | TATGTTGTTCATGGCATCTGGGTCATATGCTGTGACTaGTCCGATGATGCTCCCCTCCTTCACATCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: YVVHGIWVICCD*SDDAPLLHIFI Trigger: GATGAAGATGTGAAGGAGGGGAGCATCATCGGACAAGTCACAGCATATGACCCAGATGCCATGAACAACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS TCA 72 bp | AGGTCACAATATTGTCCCGGACGTCATCCTTTGAAATaGTCAGAGGCTCCTTTTTCCGTTGCCTCTTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: RSQYCPGRHPLK*SEAPFSVASSM Trigger: CATTGAAGAGGCAACGGAAAAAGGAGCCTCTGATCATTTCAAAGGATGACGTCCGGGACAATATTGTGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CAA 90 bp | ACTCGGTCCATATCAGTATGGCGGTCCACAGAGTATTTTATTATGTaGTTCATGGCATCTGGGTCATATGCTGTGACTTGTCCGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: TRSISVWRSTEYFIM*FMASGSYAVTCPMM Trigger: CATCATCGGACAAGTCACAGCATATGACCCAGATGCCATGAACAACATAATAAAATACTCTGTGGACCGCCATACTGATATGGACCGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CAA 72 bp | ATGGATTTTAATGATAAACTCAGATTCTGGCTCCACTaGTCGTCCGGTCTTTCTGTCTATAGCCTTGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: MDFNDKLRFWLH*SSGLSVYSLGT Trigger: CGTGCCAAGGCTATAGACAGAAAGACCGGACGACAAGTGGAGCCAGAATCTGAGTTTATCATTAAAATCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CAA 72 bp | ACATCTTCCACAGATATCTTAACCATGGCTGAGTCTTaGAAAGGTCCAAGGTGTAAGAATCGAGGATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSTDILTMAES*KGPRCKNRGSG Trigger: CCCTGATCCTCGATTCTTACACCTTGGACCTTTCAAAGACTCAGCCATGGTTAAGATATCTGTGGAAGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS GCA 72 bp | ATTGGCTTTTATCCTTCCAAGATGAGTTCCAAGAGGTaGCGACTCCAGAGAATTAAACTGATAAGTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: IGFYPSKMSSKR*RLQRIKLISAL Trigger: CAGAGCACTTATCAGTTTAATTCTCTGGAGTCGGCACCTCTTGGAACTCATCTTGGAAGGATAAAAGCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CCA 72 bp | TTGAAAGGTCCAAGGTGTAAGAATCGAGGATCAGGGTaGGTATTACTTGCATCCACTCTTAAAGTGTACAAC | + |
|
Preference number: 6 (lower is better) Translates to: LKGPRCKNRGSG*VLLASTLKVYN Trigger: GTTGTACACTTTAAGAGTGGATGCAAGTAATACCCACCCTGATCCTCGATTCTTACACCTTGGACCTTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CAA 90 bp | GTATTTTATTATGTTGTTCATGGCATCTGGGTCATATGCTGTGACTaGTCCGATGATGCTCCCCTCCTTCACATCTTCATCAACTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VFYYVVHGIWVICCD*SDDAPLLHIFINFH Trigger: ATGGAAGTTGATGAAGATGTGAAGGAGGGGAGCATCATCGGACAAGTCACAGCATATGACCCAGATGCCATGAACAACATAATAAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS GCA 72 bp | TTCTCAGGAAGTGACTGCTATCCTTTCCTTGTAATGTaGTGTTGTCAACCATATGGAAAATGCAAGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FSGSDCYPFLVM*CCQPYGKCKSR Trigger: TCTGGACTTGCATTTTCCATATGGTTGACAACAGCACATTACAAGGAAAGGATAGCAGTCACTTCCTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS GCA 72 bp | CCTTTTTCAGATTCACTATCCTTCTCAGGAAGTGACTaGTATCCTTTCCTTGTAATGTGCTGTTGTCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: PFSDSLSFSGSD*YPFLVMCCCQP Trigger: TGGTTGACAACAGCACATTACAAGGAAAGGATAGCAGTCACTTCCTGAGAAGGATAGTGAATCTGAAAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS TCA 72 bp | TCATCCTTTTTCAGATTCACTATCCTTCTCAGGAAGTaGCTGCTATCCTTTCCTTGTAATGTGCTGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSFFRFTILLRK*LLSFPCNVLLS Trigger: TGACAACAGCACATTACAAGGAAAGGATAGCAGTCACTTCCTGAGAAGGATAGTGAATCTGAAAAAGGATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CAA 72 bp | ATATCAGTATGGCGGTCCACAGAGTATTTTATTATGTaGTTCATGGCATCTGGGTCATATGCTGTGACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ISVWRSTEYFIM*FMASGSYAVTC Trigger: ACAAGTCACAGCATATGACCCAGATGCCATGAACAACATAATAAAATACTCTGTGGACCGCCATACTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CAA 90 bp | ATTAATATCATGGATTTTAATGATAAACTCAGATTCTGGCTCCACTaGTCGTCCGGTCTTTCTGTCTATAGCCTTGGCACGAAGAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: INIMDFNDKLRFWLH*SSGLSVYSLGTKNV Trigger: TACATTCTTCGTGCCAAGGCTATAGACAGAAAGACCGGACGACAAGTGGAGCCAGAATCTGAGTTTATCATTAAAATCCATGATATTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CAA 72 bp | CAAGGTGTAAGAATCGAGGATCAGGGTGGGTATTACTaGCATCCACTCTTAAAGTGTACAACATTTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: QGVRIEDQGGYY*HPLLKCTTFSF Trigger: AAAAGAAAATGTTGTACACTTTAAGAGTGGATGCAAGTAATACCCACCCTGATCCTCGATTCTTACACCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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| CDS CCA 72 bp | ATTAATATCATGGATTTTAATGATAAACTCAGATTCTaGCTCCACTTGTCGTCCGGTCTTTCTGTCTATAGC | + |
|
Preference number: 6 (lower is better) Translates to: INIMDFNDKLRF*LHLSSGLSVYS Trigger: GCTATAGACAGAAAGACCGGACGACAAGTGGAGCCAGAATCTGAGTTTATCATTAAAATCCATGATATTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026432.8 ENSMUST00000228307.2 |
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