Pregenerated sensors for CDH8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036510Ensembl transcript IDs: ENSMUST00000093249.11, ENSMUST00000128860.8, ENSMUST00000142129.8, ENSMUST00000142475.3, ENSMUST00000145601.8, ENSMUST00000155527.8
Found 344 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GAAGGACATAAGCTTCAACATTGCACGACTGGACCACGCCATCATTaGTACAGCCACAGACTCGGATGGTCAACGTACTGGTGCTACTCA | + |
Preference number: 1 (lower is better) Translates to: EGHKLQHCTTGPRHH*YSHRLGWSTYWCYS Trigger: TGAGTAGCACCAGTACGTTGACCATCCGAGTCTGTGGCTGTAGCAATGATGGCGTGGTCCAGTCGTGCAATGTTGAAGCTTATGTCCTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR CCA 90 bp | GACACAGCCTGTTTGAATGGCATTTCTCTCCTCCCACCTTTGAGTTaGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTT | + |
Preference number: 1 (lower is better) Translates to: DTACLNGISLLPPLS*QSPPWNGLRTCEYF Trigger: AAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGAAATGCCATTCAAACAGGCTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR CCA 90 bp | AATGGCATTTCTCTCCTCCCACCTTTGAGTTGGCAATCCCCACCCTaGAATGGATTACGAACATGTGAATATTTTAAGGCTCGACACAAT | + |
Preference number: 1 (lower is better) Translates to: NGISLLPPLSWQSPP*NGLRTCEYFKARHN Trigger: ATTGTGTCGAGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGAAATGCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR CCA 90 bp | CTCATGCAGCCTTACATTTATAAATTCATCGACATCAACACCATTTaGAACTGGAGCAAGCCCTTGCCTTGGCATAAACTGCAAATCTGG | + |
Preference number: 1 (lower is better) Translates to: LMQPYIYKFIDINTI*NWSKPLPWHKLQIW Trigger: CCAGATTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGATGAATTTATAAATGTAAGGCTGCATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR GCA 90 bp | TCAACACCATTTGGAACTGGAGCAAGCCCTTGCCTTGGCATAAACTaGAAATCTGGTTTAATATCCTTACGGGGTAAAAATCCATTAATT | + |
Preference number: 1 (lower is better) Translates to: STPFGTGASPCLGIN*KSGLISLRGKNPLI Trigger: AATTAATGGATTTTTACCCCGTAAGGATATTAAACCAGATTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR CCA 90 bp | TTTGAGAGAAATTATCTACTTGTGAAGTTGCTATTGAGGCTTGGCTaGCCTGAAACACATTCTTGCTCAGTCCCCATTCATGAACTTTTA | + |
Preference number: 1 (lower is better) Translates to: FERNYLLVKLLLRLG*PETHSCSVPIHELL Trigger: TAAAAGTTCATGAATGGGGACTGAGCAAGAATGTGTTTCAGGCCAGCCAAGCCTCAATAGCAACTTCACAAGTAGATAATTTCTCTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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3UTR CCA 90 bp | GCGAATGATGTTTTCTCGAACGTCTTCGTCATCTTTGATAATAAGTaGTTCATTTTTGTGCCTCCTCAGGGTAACAAACAGAACCACAAT | + |
Preference number: 1 (lower is better) Translates to: ANDVFSNVFVIFDNK*FIFVPPQGNKQNHN Trigger: ATTGTGGTTCTGTTTGTTACCCTGAGGAGGCACAAAAATGAACCACTTATTATCAAAGATGACGAAGACGTTCGAGAAAACATCATTCGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR CCA 90 bp | CAGCCTTACATTTATAAATTCATCGACATCAACACCATTTGGAACTaGAGCAAGCCCTTGCCTTGGCATAAACTGCAAATCTGGTTTAAT | + |
Preference number: 1 (lower is better) Translates to: QPYIYKFIDINTIWN*SKPLPWHKLQIWFN Trigger: ATTAAACCAGATTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGATGAATTTATAAATGTAAGGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR GCA 90 bp | CATATTCGAGAGAAACAGGAAGTTATCCAAGCCAACGTTCATAATTaGTGTGTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATA | + |
Preference number: 1 (lower is better) Translates to: HIREKQEVIQANVHN*CVQYQTVTVKILPI Trigger: TATGGGCAATATTTTAACAGTTACTGTCTGATATTGAACACAGCAATTATGAACGTTGGCTTGGATAACTTCCTGTTTCTCTCGAATATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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3UTR-3UTR CCA 90 bp | GTGGAGGGAACGAAGAATCCTGCTTCTAGACACAGCCTGTTTGAATGGCATTTCCTCCCACCTTTGAGTTaGCAATCCCCACCCTGGAAT | + |
Preference number: 2 (lower is better) Translates to: VEGTKNPASRHSLFEWHFLPPLS*QSPPWN Trigger: ATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAG...GAAATGCCATTCAAACAGGCTGTGTCTAGAAGCAGGATTCTTCGTTCCCTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR CAA 90 bp | ATGAAGTGGAGGGAACGAAGAATCCTGCTTCTAGACACAGCCTGTTaGAATGGCATTTCTCTCCTCCCACCTTTGAGTTGGCAATCCCCA | + |
Preference number: 2 (lower is better) Translates to: MKWRERRILLLDTAC*NGISLLPPLSWQSP Trigger: TGGGGATTGCCAACTCAAAGGTGGGAGGAGAGAAATGCCATTCAAACAGGCTGTGTCTAGAAGCAGGATTCTTCGTTCCCTCCACTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | GTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGGCTCCTCCCACCTTTGAGTTaGCAATCCCCACCCTGGAAT | + |
Preference number: 2 (lower is better) Translates to: VGNPHPGMDYEHVNILRLLPPLS*QSPPWN Trigger: ATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAG...GAGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | GTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGGCTCTGGCAATCCCCACCCTaGAATGGATTACGAACATGT | + |
Preference number: 2 (lower is better) Translates to: VGNPHPGMDYEHVNILRLWQSPP*NGLRTC Trigger: ACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCA...GAGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | ATAGCCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCATATGGTGGGGCCGTaGGGTCATTATCTGCCTCAT | + |
Preference number: 2 (lower is better) Translates to: IATFVASKGSDPRILQNAHMVGP*GHYLPH Trigger: ATGAGGCAGATAATGACCCCACGGCCCCACCATATG...AGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | CATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTGATTATAACACCATTTGGAACTaGAGCAAGCCCTTGCCTTGG | + |
Preference number: 2 (lower is better) Translates to: HLRGVTLEYYRMLSAIDYNTIWN*SKPLPW Trigger: CCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTT...ATAATCAATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR TCA 90 bp | ATAGCCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCCTTGTGGAAGAAGATaGAGTGGAGGGAACGAAGAA | + |
Preference number: 2 (lower is better) Translates to: IATFVASKGSDPRILQNAPCGRR*SGGNEE Trigger: TTCTTCGTTCCCTCCACTTCATCTTCTTCCACAAGG...AGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR TCA 90 bp | TCCCAATCTCTGACTGTGGCCGTCAGGATAATATCAAATATCCAAAGACTTCTACCTTGTGGAAGAAGATaGAGTGGAGGGAACGAAGAA | + |
Preference number: 2 (lower is better) Translates to: SQSLTVAVRIISNIQRLLPCGRR*SGGNEE Trigger: TTCTTCGTTCCCTCCACTTCATCTTCTTCCACAAGG...TAGAAGTCTTTGGATATTTGATATTATCCTGACGGCCACAGTCAGAGATTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR TCA 90 bp | GCCAACAATTATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCCTATTCAGTCTCTGTTaGGTGGGGCCAACAATTATA | + |
Preference number: 2 (lower is better) Translates to: ANNYIQRMVTVPCNLGGLLFSLC*VGPTII Trigger: TATAATTGTTGGCCCCACTCAACAGAGACTGAATAG...GAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATAATTGTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR TCA 90 bp | AAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTGGGTGTTCATTACTTATGATGGAGGCTTGGCTGGCCTaGAACACATTCTTGCTCAGT | + |
Preference number: 2 (lower is better) Translates to: KKVVKVAQSRTGCSLLMMEAWLA*NTFLLS Trigger: ACTGAGCAAGAATGTGTTTCAGGCCAGCCAAGCCTC...CATCATAAGTAATGAACACCCAGTCCTGCTTTGTGCTACTTTTACAACTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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3UTR-3UTR TCA 90 bp | TCCCAATCTCTGACTGTGGCCGTCAGGATAATATCAAATATCCAAAGACTTCTACGTCGTCGTAGCGAATaGTGTTTTCTCGAACGTCTT | + |
Preference number: 2 (lower is better) Translates to: SQSLTVAVRIISNIQRLLRRRSE*CFLERL Trigger: AAGACGTTCGAGAAAACATCATTCGCTACGACGACG...TAGAAGTCTTTGGATATTTGATATTATCCTGACGGCCACAGTCAGAGATTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR GCA 90 bp | CTCGACACAATATTTAAAGATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATACTGGAGCAAGCCCTTaGCTTGGCATAAACTGCAAA | + |
Preference number: 2 (lower is better) Translates to: LDTIFKDAIQSLLSGANNTGASP*LGINCK Trigger: TTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGT...ATTGTTGGCCCCACTCAACAGAGACTGAATAGCATCTTTAAATATTGTGTCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | GTGGAGGGAACGAAGAATCCTGCTTCTAGACACAGCCTGTTTGAATGGCATTTCTTGAAGCATGTTTATTaGGTGGGGCATTATGTAAGT | + |
Preference number: 2 (lower is better) Translates to: VEGTKNPASRHSLFEWHFLKHVY*VGHYVS Trigger: ACTTACATAATGCCCCACCCAATAAACATGCTTCAA...GAAATGCCATTCAAACAGGCTGTGTCTAGAAGCAGGATTCTTCGTTCCCTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | ATAGCCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTGACATCAACACCATTTaGAACTGGAGCAAGCCCTTG | + |
Preference number: 2 (lower is better) Translates to: IATFVASKGSDPRILQNADINTI*NWSKPL Trigger: CAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTC...AGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR TCA 90 bp | ACATTTATAAATTCATCGACATCAACACCATTTGGAACTGGAGCAAGCCCTTGCCTTGCTTCTGGCGGTTaGATCCATTATGTTTTGCCA | + |
Preference number: 2 (lower is better) Translates to: TFINSSTSTPFGTGASPCLASGG*IHYVLP Trigger: TGGCAAAACATAATGGATTCAACCGCCAGAAGCAAG...GCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGATGAATTTATAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | TTGAGTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGCATCTGTCTCTGATGTaGTCCACTGTGGAATACTGT | + |
Preference number: 2 (lower is better) Translates to: LSWQSPPWNGLRTCEYFKHLSLM*STVEYC Trigger: ACAGTATTCCACAGTGGACCACATCAGAGACAGATG...CTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR CAA 90 bp | TGGAATTGTCTATTTGAGAGAAATTATCTACTTGTGAAGTTGCTATaGAGGCTTGGCTGGCCTGAAACACATTCTTGCTCAGTCCCCATT | + |
Preference number: 2 (lower is better) Translates to: WNCLFERNYLLVKLL*RLGWPETHSCSVPI Trigger: AATGGGGACTGAGCAAGAATGTGTTTCAGGCCAGCCAAGCCTCAATAGCAACTTCACAAGTAGATAATTTCTCTCAAATAGACAATTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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3UTR-3UTR TCA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCCTTGTGGAAGAAGATaGAGTGGAGGGAACGAAGAA | + |
Preference number: 2 (lower is better) Translates to: YSKETITSPLDNIACHTYPCGRR*SGGNEE Trigger: TTCTTCGTTCCCTCCACTTCATCTTCTTCCACAAGG...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR TCA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATAAAAACCATCTGTCTCTaGTGTGGTCCACTGTGGAAT | + |
Preference number: 2 (lower is better) Translates to: LSTLKRLLPLPLIILPAIKTICL*CGPLWN Trigger: ATTCCACAGTGGACCACATCAGAGACAGATGGTTTT...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR TCA 90 bp | CATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTGATTATCTATTCAGTCTCTGTTaGGTGGGGCCAACAATTATA | + |
Preference number: 2 (lower is better) Translates to: HLRGVTLEYYRMLSAIDYLFSLC*VGPTII Trigger: TATAATTGTTGGCCCCACTCAACAGAGACTGAATAG...ATAATCAATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATCTGTCTCTGATGTaGTCCACTGTGGAATACTGT | + |
Preference number: 2 (lower is better) Translates to: YTFYSKETITSPLDNIACHLSLM*STVEYC Trigger: ACAGTATTCCACAGTGGACCACATCAGAGACAGATG...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACTTGAAGCATGTTTATTaGGTGGGGCATTATGTAAGT | + |
Preference number: 2 (lower is better) Translates to: SHLLVLICFCSLRRSAHHLKHVY*VGHYVS Trigger: ACTTACATAATGCCCCACCCAATAAACATGCTTCAA...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | GTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGGCTCCATAAACTGCAAATCTaGTTTAATATCCTTACGGGG | + |
Preference number: 2 (lower is better) Translates to: VGNPHPGMDYEHVNILRLHKLQI*FNILTG Trigger: CCCCGTAAGGATATTAAACCAGATTTGCAGTTTATG...GAGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR TCA 90 bp | CTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCAAAATGTAAAACCATCTGTCTCTaGTGTGGTCCACTGTGGAAT | + |
Preference number: 2 (lower is better) Translates to: LLPLPLIILPAILISSKCKTICL*CGPLWN Trigger: ATTCCACAGTGGACCACATCAGAGACAGATGGTTTT...ACATTTTGATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR TCA 90 bp | GAAAATAGTCCAAAAGTTTCTCTGGGAAATGCTGTTCCTGTAATCACCAGTCACAAAAGTGACCCACAGTaGGATTTCATTGCACAGTTT | + |
Preference number: 2 (lower is better) Translates to: ENSPKVSLGNAVPVITSHKSDPQ*DFIAQF Trigger: AAACTGTGCAATGAAATCTCACTGTGGGTCACTTTT...GTGACTGGTGATTACAGGAACAGCATTTCCCAGAGAAACTTTTGGACTATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093249.11 |
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3UTR-3UTR CCA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCATCTGTCTCTGATGTaGTCCACTGTGGAATACTGT | + |
Preference number: 2 (lower is better) Translates to: YSKETITSPLDNIACHTYHLSLM*STVEYC Trigger: ACAGTATTCCACAGTGGACCACATCAGAGACAGATG...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | CATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTGATTATTCAGTCTCTGTTGAGTaGGGCCAACAATTATATACA | + |
Preference number: 2 (lower is better) Translates to: HLRGVTLEYYRMLSAIDYSVSVE*GQQLYT Trigger: TGTATATAATTGTTGGCCCCACTCAACAGAGACTGA...ATAATCAATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | ATACCTCACACAACCAGGTATCTGAGTGTAGAGGTAATAAATATGCATGTATTACTATTGAGGCTTGGCTaGCCTGAAACACATTCTTGC | + |
Preference number: 2 (lower is better) Translates to: IPHTTRYLSVEVINMHVLLLRLG*PETHSC Trigger: GCAAGAATGTGTTTCAGGCCAGCCAAGCCTCAATAG...TAATACATGCATATTTATTACCTCTACACTCAGATACCTGGTTGTGTGAGGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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3UTR-3UTR CCA 90 bp | GTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGGCTCTCCATTAATTCCATCTaGGTTTTGCAAAGTTGCAAT | + |
Preference number: 2 (lower is better) Translates to: VGNPHPGMDYEHVNILRLSINSI*VLQSCN Trigger: ATTGCAACTTTGCAAAACCCAGATGGAATTAATGGA...GAGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR CAA 90 bp | ATTTTAAGGCTCGACACAATATTTAAAGATGCTATTCAGTCTCTGTaGAGTGGGGCCAACAATTATATACAACGTATGGTCACCGTACCA | + |
Preference number: 2 (lower is better) Translates to: ILRLDTIFKDAIQSL*SGANNYIQRMVTVP Trigger: TGGTACGGTGACCATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATCTTTAAATATTGTGTCGAGCCTTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR TCA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATTGGGAGAGGAAAATTTaGAGCATGTTTATTGGGTGG | + |
Preference number: 2 (lower is better) Translates to: YSKETITSPLDNIACHTYWERKI*SMFIGW Trigger: CCACCCAATAAACATGCTTCAAATTTTCCTCTCCCA...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR-3UTR GCA 90 bp | TCTGCCTCATGCAGCCTTACATTTATAAATTCATCGACATCAACACCATTTGGAAGCAGACCAAAGTATTaGTTTATCATTTGTGACGGG | + |
Preference number: 2 (lower is better) Translates to: SASCSLTFINSSTSTPFGSRPKY*FIICDG Trigger: CCCGTCACAAATGATAAAGCAATACTTTGGTCTGCT...TCCAAATGGTGTTGATGTCGATGAATTTATAAATGTAAGGCTGCATGAGGCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR GCA 90 bp | ACATTTATAAATTCATCGACATCAACACCATTTGGAACTGGAGCAAGCCCTTGCGAATCCATTATGTTTTaGCAGAATGCTCAGGGAATT | + |
Preference number: 2 (lower is better) Translates to: TFINSSTSTPFGTGASPCESIMF*QNAQGI Trigger: AATTCCCTGAGCATTCTGGCAAAACATAATGGATTC...GCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGATGAATTTATAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR GCA 90 bp | CTCCATAAAGTCATAACGTACAGCAGACCAAAGTATTGCTTTATCATTTGTGACAGTGGTTCATTTTTGTaGCTCCTCAGGGTAACAAAC | + |
Preference number: 2 (lower is better) Translates to: LHKVITYSRPKYCFIICDSGSFL*LLRVTN Trigger: GTTTGTTACCCTGAGGAGGCACAAAAATGAACCACT...GTCACAAATGATAAAGCAATACTTTGGTCTGCTGTACGTTATGACTTTATGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR GCA 90 bp | TCCCAATCTCTGACTGTGGCCGTCAGGATAATATCAAATATCCAAAGACTTCTATGCCTTGGCATAAACTaGAAATCTGGTTTAATATCC | + |
Preference number: 2 (lower is better) Translates to: SQSLTVAVRIISNIQRLLCLGIN*KSGLIS Trigger: GGATATTAAACCAGATTTGCAGTTTATGCCAAGGCA...TAGAAGTCTTTGGATATTTGATATTATCCTGACGGCCACAGTCAGAGATTGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR-3UTR CCA 90 bp | AACAGCCATTTCAGGGTTTCAAAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTTTGAGTAATACATCATaGCTCCTGGATGCGAGAAAA | + |
Preference number: 2 (lower is better) Translates to: NSHFRVSKKVVKVAQSRTLSNTS*LLDARK Trigger: TTTTCTCGCATCCAGGAGCCATGATGTATTACTCAA...AGTCCTGCTTTGTGCTACTTTTACAACTTTCTTTGAAACCCTGAAATGGCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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3UTR-3UTR TCA 90 bp | AACAGCCATTTCAGGGTTTCAAAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTCTTATATCACTGTTTTaGGTAATACATCATGGCTCC | + |
Preference number: 2 (lower is better) Translates to: NSHFRVSKKVVKVAQSRTLISLF*VIHHGS Trigger: GGAGCCATGATGTATTACTCAAAACAGTGATATAAG...AGTCCTGCTTTGTGCTACTTTTACAACTTTCTTTGAAACCCTGAAATGGCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR-3UTR CCA 90 bp | GAAAATAGTCCAAAAGTTTCTCTGGGAAATGCTGTTCCTGTAATCACCAGTCACTTTTCTACTCCTACATaGCAGGTTTGCATTACAAAT | + |
Preference number: 2 (lower is better) Translates to: ENSPKVSLGNAVPVITSHFSTPT*QVCITN Trigger: ATTTGTAATGCAAACCTGCCATGTAGGAGTAGAAAA...GTGACTGGTGATTACAGGAACAGCATTTCCCAGAGAAACTTTTGGACTATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR GCA 90 bp | AAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTGGGTGTTCATTACTTATGATGCTGAAGGCATTAAACTaGTTCAATTCTGTTTCAGCA | + |
Preference number: 2 (lower is better) Translates to: KKVVKVAQSRTGCSLLMMLKALN*FNSVSA Trigger: TGCTGAAACAGAATTGAAGCAGTTTAATGCCTTCAG...CATCATAAGTAATGAACACCCAGTCCTGCTTTGTGCTACTTTTACAACTTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR-3UTR GCA 90 bp | AAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTGGGTGTTCATTACTTATGATGCCAGCAAGTTTGGCCTaGTTGAAAATCTCTAAATAT | + |
Preference number: 2 (lower is better) Translates to: KKVVKVAQSRTGCSLLMMPASLA*LKISKY Trigger: ATATTTAGAGATTTTCAAGCAGGCCAAACTTGCTGG...CATCATAAGTAATGAACACCCAGTCCTGCTTTGTGCTACTTTTACAACTTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR-3UTR GCA 90 bp | ATACCTCACACAACCAGGTATCTGAGTGTAGAGGTAATAAATATGCATGTATTAATTCCTAGCCTTTTATaGATAGTCCAGCAAGTTTGG | + |
Preference number: 2 (lower is better) Translates to: IPHTTRYLSVEVINMHVLIPSLL*IVQQVW Trigger: CCAAACTTGCTGGACTATGCATAAAAGGCTAGGAAT...TAATACATGCATATTTATTACCTCTACACTCAGATACCTGGTTGTGTGAGGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR-3UTR CCA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATATTTTCTACTCCTACATaGCAGGTTTGCATTACAAAT | + |
Preference number: 2 (lower is better) Translates to: LSTLKRLLPLPLIILPAIFSTPT*QVCITN Trigger: ATTTGTAATGCAAACCTGCCATGTAGGAGTAGAAAA...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR GCA 90 bp | AAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTGGGTGTTCATTACTTATGATGTGCCACTTGTTATACTaGCATCACATTTTTAGAACT | + |
Preference number: 2 (lower is better) Translates to: KKVVKVAQSRTGCSLLMMCHLLY*HHIFRT Trigger: AGTTCTAAAAATGTGATGGCAGTATAACAAGTGGCA...CATCATAAGTAATGAACACCCAGTCCTGCTTTGTGCTACTTTTACAACTTTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR-3UTR CCA 90 bp | AAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTGGGTGTTCATTACTTATGATGAAATACCAACTGCTTTaGTATTTGGGCAAAACCTTA | + |
Preference number: 2 (lower is better) Translates to: KKVVKVAQSRTGCSLLMMKYQLL*YLGKTL Trigger: TAAGGTTTTGCCCAAATACCAAAGCAGTTGGTATTT...CATCATAAGTAATGAACACCCAGTCCTGCTTTGTGCTACTTTTACAACTTTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR GCA 72 bp | GAGCTCTATTTCCTGTTTCGTGTGTGTGTGTGCGCGTaGACACGCGTGTGTGTGTGTGTGTGTGTGTGTGCA | + |
Preference number: 3 (lower is better) Translates to: ELYFLFRVCVCA*TRVCVCVCVCA Trigger: TGCACACACACACACACACACACACACGCGTGTGCACGCGCACACACACACACGAAACAGGAAATAGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR GCA 72 bp | AAGCTTCAACATTGCACGACTGGACCACGCCATCATTaGTACAGCCACAGACTCGGATGGTCAACGTACTGG | + |
Preference number: 3 (lower is better) Translates to: KLQHCTTGPRHH*YSHRLGWSTYW Trigger: CCAGTACGTTGACCATCCGAGTCTGTGGCTGTAGCAATGATGGCGTGGTCCAGTCGTGCAATGTTGAAGCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | TTGAATGGCATTTCTCTCCTCCCACCTTTGAGTTGGCAATCCCCACCCTGGAATCAGAAGGTAGACTTCTaGCTTCTGGCGGTTGAATCC | + |
Preference number: 3 (lower is better) Translates to: LNGISLLPPLSWQSPPWNQKVDF*LLAVES Trigger: GGATTCAACCGCCAGAAGCAAGAAGTCTACCTTCTG...ATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGAAATGCCATTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | TTGAATGGCATTTCTCTCCTCCCACCTTTGAGTTGGCAATCCCCACCCTGGAATCGACATCAACACCATTaGGAACTGGAGCAAGCCCTT | + |
Preference number: 3 (lower is better) Translates to: LNGISLLPPLSWQSPPWNRHQHH*ELEQAL Trigger: AAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCG...ATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGAAATGCCATTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | ACGAGCAGCAAAATGATGCATGCTAATATAGCAATTAAGGCGCCCATACTGAGTTGGACCACGCCATCATaGCTACAGCCACAGACTCGG | + |
Preference number: 3 (lower is better) Translates to: TSSKMMHANIAIKAPILSWTTPS*LQPQTR Trigger: CCGAGTCTGTGGCTGTAGCAATGATGGCGTGGTCCA...ACTCAGTATGGGCGCCTTAATTGCTATATTAGCATGCATCATTTTGCTGCTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | TTGAGTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGTCTCTCCTCCCACCTTaGAGTTGGCAATCCCCACCC | + |
Preference number: 3 (lower is better) Translates to: LSWQSPPWNGLRTCEYFKSLLPP*SWQSPP Trigger: GGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGA...CTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR CCA 72 bp | TGTTTGAATGGCATTTCTCTCCTCCCACCTTTGAGTTaGCAATCCCCACCCTGGAATGGATTACGAACATGT | + |
Preference number: 3 (lower is better) Translates to: CLNGISLLPPLS*QSPPWNGLRTC Trigger: ACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGAAATGCCATTCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | GTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGGCTCCTAGACACAGCCTGTTaGAATGGCATTTCTCTCCTC | + |
Preference number: 3 (lower is better) Translates to: VGNPHPGMDYEHVNILRLLDTAC*NGISLL Trigger: GAGGAGAGAAATGCCATTCAAACAGGCTGTGTCTAG...GAGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | AAATTCATCGACATCAACACCATTTGGAACTGGAGCAAGCCCTTGCCTTGGCATCTGGGTTTTGCAAAGTaGCAATGTCAAAAGCCTCTG | + |
Preference number: 3 (lower is better) Translates to: KFIDINTIWNWSKPLPWHLGFAK*QCQKPL Trigger: CAGAGGCTTTTGACATTGCAACTTTGCAAAACCCAG...ATGCCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGATGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR CCA 72 bp | TCTCTCCTCCCACCTTTGAGTTGGCAATCCCCACCCTaGAATGGATTACGAACATGTGAATATTTTAAGGCT | + |
Preference number: 3 (lower is better) Translates to: SLLPPLSWQSPP*NGLRTCEYFKA Trigger: AGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | TATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCCCCAATCTCCTCCCCTTGATAATATaGCCTGCCATACTTATCTCA | + |
Preference number: 3 (lower is better) Translates to: YIQRMVTVPCNLGGLPNLLPLII*PAILIS Trigger: TGAGATAAGTATGGCAGGCAATATTATCAAGGGGAG...GAGATTGGGGAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | GTGGAGGGAACGAAGAATCCTGCTTCTAGACACAGCCTGTTTGAATGGCATTTCTTTGAAGCATGTTTATaGGGTGGGGCATTATGTAAG | + |
Preference number: 3 (lower is better) Translates to: VEGTKNPASRHSLFEWHFFEACL*GGALCK Trigger: CTTACATAATGCCCCACCCAATAAACATGCTTCAAA...GAAATGCCATTCAAACAGGCTGTGTCTAGAAGCAGGATTCTTCGTTCCCTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | GTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGGCTCGCTATTCAGTCTCTGTaGAGTGGGGCCAACAATTAT | + |
Preference number: 3 (lower is better) Translates to: VGNPHPGMDYEHVNILRLAIQSL*SGANNY Trigger: ATAATTGTTGGCCCCACTCAACAGAGACTGAATAGC...GAGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | CCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTCTAGACACAGCCTGTTaGAATGGCATTTCTCTCCTC | + |
Preference number: 3 (lower is better) Translates to: PHLLHLRGVTLEYYRMLSLDTAC*NGISLL Trigger: GAGGAGAGAAATGCCATTCAAACAGGCTGTGTCTAG...ACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACTCTTGCTTCTGGCGGTaGAATCCATTATGTTTTGCC | + |
Preference number: 3 (lower is better) Translates to: SHLLVLICFCSLRRSAHHSCFWR*NPLCFA Trigger: GGCAAAACATAATGGATTCAACCGCCAGAAGCAAGA...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | ATAGCCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTAACTGGAGCAAGCCCTaGCCTTGGCATAAACTGCAA | + |
Preference number: 3 (lower is better) Translates to: IATFVASKGSDPRILQNANWSKP*PWHKLQ Trigger: TTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTT...AGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | GCCAACAATTATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCCTCCCCTTGATAATATaGCCTGCCATACTTATCTCA | + |
Preference number: 3 (lower is better) Translates to: ANNYIQRMVTVPCNLGGLLPLII*PAILIS Trigger: TGAGATAAGTATGGCAGGCAATATTATCAAGGGGAG...GAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATAATTGTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | GATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATTATATACAACGTATGGTCGCTATTCAGTCTCTGTaGAGTGGGGCCAACAATTAT | + |
Preference number: 3 (lower is better) Translates to: DAIQSLLSGANNYIQRMVAIQSL*SGANNY Trigger: ATAATTGTTGGCCCCACTCAACAGAGACTGAATAGC...GACCATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | GTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGGCTCATAAGTGGTTCATTTTaGTGCCTCCTCAGGGTAACA | + |
Preference number: 3 (lower is better) Translates to: VGNPHPGMDYEHVNILRLISGSF*CLLRVT Trigger: TGTTACCCTGAGGAGGCACAAAAATGAACCACTTAT...GAGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR CCA 72 bp | AATTATCTACTTGTGAAGTTGCTATTGAGGCTTGGCTaGCCTGAAACACATTCTTGCTCAGTCCCCATTCAT | + |
Preference number: 3 (lower is better) Translates to: NYLLVKLLLRLG*PETHSCSVPIH Trigger: ATGAATGGGGACTGAGCAAGAATGTGTTTCAGGCCAGCCAAGCCTCAATAGCAACTTCACAAGTAGATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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3UTR CCA 72 bp | ATCAACACCATTTGGAACTGGAGCAAGCCCTTGCCTTaGCATAAACTGCAAATCTGGTTTAATATCCTTACG | + |
Preference number: 3 (lower is better) Translates to: INTIWNWSKPLP*HKLQIWFNILT Trigger: CGTAAGGATATTAAACCAGATTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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3UTR GCA 72 bp | TTTGGAACTGGAGCAAGCCCTTGCCTTGGCATAAACTaGAAATCTGGTTTAATATCCTTACGGGGTAAAAAT | + |
Preference number: 3 (lower is better) Translates to: FGTGASPCLGIN*KSGLISLRGKN Trigger: ATTTTTACCCCGTAAGGATATTAAACCAGATTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTTCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR CCA 72 bp | CCTTACATTTATAAATTCATCGACATCAACACCATTTaGAACTGGAGCAAGCCCTTGCCTTGGCATAAACTG | + |
Preference number: 3 (lower is better) Translates to: PYIYKFIDINTI*NWSKPLPWHKL Trigger: CAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGATGAATTTATAAATGTAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | CTCGACACAATATTTAAAGATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATCTATTACCTCTCCCCTaGATAATATTGCCTGCCATA | + |
Preference number: 3 (lower is better) Translates to: LDTIFKDAIQSLLSGANNLLPLP*IILPAI Trigger: TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAG...ATTGTTGGCCCCACTCAACAGAGACTGAATAGCATCTTTAAATATTGTGTCGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTATTACCTCTCCCCTaGATAATATTGCCTGCCATA | + |
Preference number: 3 (lower is better) Translates to: LSTLKRLLPLPLIILPAILLPLP*IILPAI Trigger: TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAG...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR CCA 72 bp | AGAGTGACTTATATCACTGTTTTGAGTAATACATCATaGCTCCTGGATGCGAGAAAACATCCGCCTTGTAAA | + |
Preference number: 3 (lower is better) Translates to: RVTYITVLSNTS*LLDARKHPPCK Trigger: TTTACAAGGCGGATGTTTTCTCGCATCCAGGAGCCATGATGTATTACTCAAAACAGTGATATAAGTCACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR CCA 72 bp | ATTTATAAATTCATCGACATCAACACCATTTGGAACTaGAGCAAGCCCTTGCCTTGGCATAAACTGCAAATC | + |
Preference number: 3 (lower is better) Translates to: IYKFIDINTIWN*SKPLPWHKLQI Trigger: GATTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGATGAATTTATAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCCCCTTGATAATATaGCCTGCCATACTTATCTCA | + |
Preference number: 3 (lower is better) Translates to: YSKETITSPLDNIACHTYLPLII*PAILIS Trigger: TGAGATAAGTATGGCAGGCAATATTATCAAGGGGAG...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | TTGGGAGAGGAAAATTTGAAGCATGTTTATTGGGTGGGGCATTATGTAAGTATCTTTGAAGCATGTTTATaGGGTGGGGCATTATGTAAG | + |
Preference number: 3 (lower is better) Translates to: LGEENLKHVYWVGHYVSIFEACL*GGALCK Trigger: CTTACATAATGCCCCACCCAATAAACATGCTTCAAA...GATACTTACATAATGCCCCACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATATTGGGAGAGGAAAATTaGAAGCATGTTTATTGGGTG | + |
Preference number: 3 (lower is better) Translates to: LSTLKRLLPLPLIILPAILGEEN*KHVYWV Trigger: CACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR GCA 72 bp | TTTATTTTTAAGCAGGTCGTTTTTCATACTCAAGCTTaGCAGAAGCAAAGCTTGGACTGTCCTGAAACTTCA | + |
Preference number: 3 (lower is better) Translates to: FIFKQVVFHTQA*QKQSLDCPETS Trigger: TGAAGTTTCAGGACAGTCCAAGCTTTGCTTCTGGCAAGCTTGAGTATGAAAAACGACCTGCTTAAAAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR-3UTR CAA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATTTGGGAGAGGAAAATTaGAAGCATGTTTATTGGGTG | + |
Preference number: 3 (lower is better) Translates to: YSKETITSPLDNIACHTYLGEEN*KHVYWV Trigger: CACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR-3UTR CAA 90 bp | ATAAAAACCATTTGCACTCATAAGAATCCTTACAGAAGACACATATCAGCAGCACACTGTCAAGTTTCTTaGTCACTTTCACCAACAGAG | + |
Preference number: 3 (lower is better) Translates to: IKTICTHKNPYRRHISAAHCQVS*SLSPTE Trigger: CTCTGTTGGTGAAAGTGACAAAGAAACTTGACAGTG...TGCTGCTGATATGTGTCTTCTGTAAGGATTCTTATGAGTGCAAATGGTTTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR TCA 72 bp | TCGACACAATATTTAAAGATGCTATTCAGTCTCTGTTaGGTGGGGCCAACAATTATATACAACGTATGGTCA | + |
Preference number: 3 (lower is better) Translates to: STQYLKMLFSLC*VGPTIIYNVWS Trigger: TGACCATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATCTTTAAATATTGTGTCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR TCA 72 bp | AGCCTTTTATGCATAGTCCAGCAAGTTTGGCCTGCTTaGAAATCTCTAAATATTCCTTTTCAAAGGCATACA | + |
Preference number: 3 (lower is better) Translates to: SLLCIVQQVWPA*KSLNIPFQRHT Trigger: TGTATGCCTTTGAAAAGGAATATTTAGAGATTTTCAAGCAGGCCAAACTTGCTGGACTATGCATAAAAGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR GCA 72 bp | TCATTACTTATGATGGCCACGACTAGTTTTCTAGTTTaGTATGCACAGAGTGACTTATATCACTGTTTTGAG | + |
Preference number: 3 (lower is better) Translates to: SLLMMATTSFLV*YAQSDLYHCFE Trigger: CTCAAAACAGTGATATAAGTCACTCTGTGCATAGCAAACTAGAAAACTAGTCGTGGCCATCATAAGTAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR-3UTR CAA 90 bp | ATACCTCACACAACCAGGTATCTGAGTGTAGAGGTAATAAATATGCATGTATTACAACTGCTTTGGTATTaGGGCAAAACCTTATTAGCA | + |
Preference number: 3 (lower is better) Translates to: IPHTTRYLSVEVINMHVLQLLWY*GKTLLA Trigger: TGCTAATAAGGTTTTGCCCAAATACCAAAGCAGTTG...TAATACATGCATATTTATTACCTCTACACTCAGATACCTGGTTGTGTGAGGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
3UTR-3UTR CAA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATAATTCCATCTGGGTTTaGCAAAGTTGCAATGTCAAA | + |
Preference number: 3 (lower is better) Translates to: YSKETITSPLDNIACHTYNSIWV*QSCNVK Trigger: TTTGACATTGCAACTTTGCAAAACCCAGATGGAATT...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
||
3UTR GCA 72 bp | GAGAAACAGGAAGTTATCCAAGCCAACGTTCATAATTaGTGTGTTCAATATCAGACAGTAACTGTTAAAATA | + |
Preference number: 3 (lower is better) Translates to: EKQEVIQANVHN*CVQYQTVTVKI Trigger: TATTTTAACAGTTACTGTCTGATATTGAACACAGCAATTATGAACGTTGGCTTGGATAACTTCCTGTTTCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
||
CDS-3UTR TCA 90 bp | TTGAATGGCATTTCTCTCCTCCCACCTTTGAGTTGGCAATCCCCACCCTGGAATCAGTCAGGGTCACTGTaGGTGTTGTGGTTCCAGACA | + |
Preference number: 4 (lower is better) Translates to: LNGISLLPPLSWQSPPWNQSGSL*VLWFQT Trigger: TGTCTGGAACCACAACACTCACAGTGACCCTGACTG...ATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGAAATGCCATTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR TCA 90 bp | GATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATTATATACAACGTATGGTCTGGACTCCAAGGAGCTaGGGGAGCCAGCCACAGACC | + |
Preference number: 4 (lower is better) Translates to: DAIQSLLSGANNYIQRMVWTPRS*GSQPQT Trigger: GGTCTGTGGCTGGCTCCCTCAGCTCCTTGGAGTCCA...GACCATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
||
CDS-3UTR TCA 90 bp | TATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCCCCAATCTCAAGGAGGTAAGTTGGTaGAGAGAAGACCGGAGGCTC | + |
Preference number: 4 (lower is better) Translates to: YIQRMVTVPCNLGGLPNLKEVSW*REDRRL Trigger: GAGCCTCCGGTCTTCTCTTCACCAACTTACCTCCTT...GAGATTGGGGAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR GCA 90 bp | TTGAATGGCATTTCTCTCCTCCCACCTTTGAGTTGGCAATCCCCACCCTGGAATTGTCTTCACTCTGCCTaGTTAGTTCCAAAGGGGATC | + |
Preference number: 4 (lower is better) Translates to: LNGISLLPPLSWQSPPWNCLHSA*LVPKGI Trigger: GATCCCCTTTGGAACTAAGCAGGCAGAGTGAAGACA...ATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGAAATGCCATTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR GCA 90 bp | GTGGAGGGAACGAAGAATCCTGCTTCTAGACACAGCCTGTTTGAATGGCATTTCCGCATGTCTTCACTCTaGCTGCTTAGTTCCAAAGGG | + |
Preference number: 4 (lower is better) Translates to: VEGTKNPASRHSLFEWHFRMSSL*LLSSKG Trigger: CCCTTTGGAACTAAGCAGGCAGAGTGAAGACATGCG...GAAATGCCATTCAAACAGGCTGTGTCTAGAAGCAGGATTCTTCGTTCCCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR CAA 72 bp | CTGTTTGAATGGCATTTCTCTCCTCCCACCTTTGAGTaGGCAATCCCCACCCTGGAATGGATTACGAACATG | + |
Preference number: 4 (lower is better) Translates to: LFEWHFSPPTFE*AIPTLEWITNM Trigger: CATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGAAATGCCATTCAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
3UTR CAA 72 bp | AGGGAACGAAGAATCCTGCTTCTAGACACAGCCTGTTaGAATGGCATTTCTCTCCTCCCACCTTTGAGTTGG | + |
Preference number: 4 (lower is better) Translates to: RERRILLLDTAC*NGISLLPPLSW Trigger: CCAACTCAAAGGTGGGAGGAGAGAAATGCCATTCAAACAGGCTGTGTCTAGAAGCAGGATTCTTCGTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR TCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACCAGTCAGGGTCACTGTaGGTGTTGTGGTTCCAGACA | + |
Preference number: 4 (lower is better) Translates to: SHLLVLICFCSLRRSAHHQSGSL*VLWFQT Trigger: TGTCTGGAACCACAACACTCACAGTGACCCTGACTG...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR TCA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTCTCCTCCCACCTTTaGGTTGGCAATCCCCACCGG | + |
Preference number: 4 (lower is better) Translates to: LSTLKRLLPLPLIILPAILSSHL*VGNPHR Trigger: CCGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAG...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093249.11 |
||
CDS-3UTR CCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACCATATGGTGGGGCCGTaGGGTCATTATCTGCCTCAT | + |
Preference number: 4 (lower is better) Translates to: SHLLVLICFCSLRRSAHHHMVGP*GHYLPH Trigger: ATGAGGCAGATAATGACCCCACGGCCCCACCATATG...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
||
CDS-3UTR TCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGCAGTCAGGGTCACTGTaGGTGTTGTGGTTCCAGACA | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGQSGSL*VLWFQT Trigger: TGTCTGGAACCACAACACTCACAGTGACCCTGACTG...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
||
CDS-3UTR TCA 90 bp | GCCAACAATTATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCCCTGGGCATCAGAAGTaGTTTCGAATAGTGCTGTCC | + |
Preference number: 4 (lower is better) Translates to: ANNYIQRMVTVPCNLGGLPGHQK*FRIVLS Trigger: GGACAGCACTATTCGAAATCACTTCTGATGCCCAGG...GAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATAATTGTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR TCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGAAGGAGGTAAGTTGGTaGAGAGAAGACCGGAGGCTC | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGKEVSW*REDRRL Trigger: GAGCCTCCGGTCTTCTCTTCACCAACTTACCTCCTT...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR GCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACCGCATGTCTTCACTCTaGCTGCTTAGTTCCAAAGGG | + |
Preference number: 4 (lower is better) Translates to: SHLLVLICFCSLRRSAHHRMSSL*LLSSKG Trigger: CCCTTTGGAACTAAGCAGGCAGAGTGAAGACATGCG...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACTGCCTCATATTCGGATaGGAATTCAGGGGCGTTGTC | + |
Preference number: 4 (lower is better) Translates to: SHLLVLICFCSLRRSAHHCLIFG*EFRGVV Trigger: GACAACGCCCCTGAATTCGCATCCGAATATGAGGCA...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR GCA 90 bp | GCCAACAATTATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCTGCCTCATATTCGGATaGGAATTCAGGGGCGTTGTC | + |
Preference number: 4 (lower is better) Translates to: ANNYIQRMVTVPCNLGGLCLIFG*EFRGVV Trigger: GACAACGCCCCTGAATTCGCATCCGAATATGAGGCA...GAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATAATTGTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
||
CDS-3UTR CCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACAAACCCAGCCTCTTTTaGAGCGGCTCAAAATCCGCA | + |
Preference number: 4 (lower is better) Translates to: SHLLVLICFCSLRRSAHHKPSLF*SGSKSA Trigger: TGCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTT...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGACACCATCCTGGGCCTaGGCATCAGAAGTGATTTCG | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGTPSWA*ASEVIS Trigger: CGAAATCACTTCTGATGCCCAGGCCCAGGATGGTGT...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR TCA 90 bp | TATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCCCCAATCTCTCCAGGACAAACATTTaGTTCCAAACCCAGCCTCTT | + |
Preference number: 4 (lower is better) Translates to: YIQRMVTVPCNLGGLPNLSRTNI*FQTQPL Trigger: AAGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGA...GAGATTGGGGAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | TTGAGTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGCAGTCAGGGTCACTGTaGGTGTTGTGGTTCCAGACA | + |
Preference number: 4 (lower is better) Translates to: LSWQSPPWNGLRTCEYFKQSGSL*VLWFQT Trigger: TGTCTGGAACCACAACACTCACAGTGACCCTGACTG...CTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | GCCAACAATTATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCTTATTGGACTGGAAGTaGTATCAGGGTCACGAGCTG | + |
Preference number: 4 (lower is better) Translates to: ANNYIQRMVTVPCNLGGLLLDWK*YQGHEL Trigger: CAGCTCGTGACCCTGATATCACTTCCAGTCCAATAA...GAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATAATTGTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACCGTCGTCGTAGCGAATaGTGTTTTCTCGAACGTCTT | + |
Preference number: 4 (lower is better) Translates to: SHLLVLICFCSLRRSAHHRRRSE*CFLERL Trigger: AAGACGTTCGAGAAAACATCATTCGCTACGACGACG...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR GCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGCGCATGTCTTCACTCTaGCTGCTTAGTTCCAAAGGG | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGRMSSL*LLSSKG Trigger: CCCTTTGGAACTAAGCAGGCAGAGTGAAGACATGCG...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR GCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTGCCTCATATTCGGATaGGAATTCAGGGGCGTTGTC | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGCLIFG*EFRGVV Trigger: GACAACGCCCCTGAATTCGCATCCGAATATGAGGCA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACACTGTTTCCATAAACTaGGTCGTCAGCATCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: SHLLVLICFCSLRRSAHHTVSIN*VVSISG Trigger: GCCACTGATGCTGACGACCCAGTTTATGGAAACAGT...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GAAAATAGTCCAAAAGTTTCTCTGGGAAATGCTGTTCCTGTAATCACCAGTCACACACCATCCTGGGCCTaGGCATCAGAAGTGATTTCG | + |
Preference number: 4 (lower is better) Translates to: ENSPKVSLGNAVPVITSHTPSWA*ASEVIS Trigger: CGAAATCACTTCTGATGCCCAGGCCCAGGATGGTGT...GTGACTGGTGATTACAGGAACAGCATTTCCCAGAGAAACTTTTGGACTATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | ATGATGCATGCTAATATAGCAATTAAGGCGCCCATACTGAGTCCAATAGGAAGGCTTATAACACCATCCTaGGCCTGGGCATCAGAAGTG | + |
Preference number: 4 (lower is better) Translates to: MMHANIAIKAPILSPIGRLITPS*AWASEV Trigger: CACTTCTGATGCCCAGGCCCAGGATGGTGTTATAAG...CCTTCCTATTGGACTCAGTATGGGCGCCTTAATTGCTATATTAGCATGCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACCAGTGTGGCGGTCAATaGAAAACCTTATTGGACTGG | + |
Preference number: 4 (lower is better) Translates to: SHLLVLICFCSLRRSAHHQCGGQ*KTLLDW Trigger: CCAGTCCAATAAGGTTTTCCATTGACCGCCACACTG...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGGCTCCTTTCCAGGTCAGTGTaGCGGTCAATGGAAAACCTT | + |
Preference number: 4 (lower is better) Translates to: VGNPHPGMDYEHVNILRLLSRSV*RSMENL Trigger: AAGGTTTTCCATTGACCGCCACACTGACCTGGAAAG...GAGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACTCCAGGACAAACATTTaGTTCCAAACCCAGCCTCTT | + |
Preference number: 4 (lower is better) Translates to: SHLLVLICFCSLRRSAHHSRTNI*FQTQPL Trigger: AAGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGA...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | TCCCAATCTCTGACTGTGGCCGTCAGGATAATATCAAATATCCAAAGACTTCTACCTGGGCATCAGAAGTaGTTTCGAATAGTGCTGTCC | + |
Preference number: 4 (lower is better) Translates to: SQSLTVAVRIISNIQRLLPGHQK*FRIVLS Trigger: GGACAGCACTATTCGAAATCACTTCTGATGCCCAGG...TAGAAGTCTTTGGATATTTGATATTATCCTGACGGCCACAGTCAGAGATTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGCCTGGGCATCAGAAGTaGTTTCGAATAGTGCTGTCC | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQPGHQK*FRIVLS Trigger: GGACAGCACTATTCGAAATCACTTCTGATGCCCAGG...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR GCA 90 bp | TTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTTGTCTTCACTCTGCCTaGTTAGTTCCAAAGGGGATC | + |
Preference number: 4 (lower is better) Translates to: LLHLRGVTLEYYRMLSAICLHSA*LVPKGI Trigger: GATCCCCTTTGGAACTAAGCAGGCAGAGTGAAGACA...AATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGAAACCCAGCCTCTTTTaGAGCGGCTCAAAATCCGCA | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQKPSLF*SGSKSA Trigger: TGCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTT...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGACTGTTTCCATAAACTaGGTCGTCAGCATCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGTVSIN*VVSISG Trigger: GCCACTGATGCTGACGACCCAGTTTATGGAAACAGT...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | CAAATAGCCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATACACCATCCTGGGCCTaGGCATCAGAAGTGATTTCG | + |
Preference number: 4 (lower is better) Translates to: QIATFVASKGSDPRILQNTPSWA*ASEVIS Trigger: CGAAATCACTTCTGATGCCCAGGCCCAGGATGGTGT...ATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGGCTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGCTTATAACACCATCCTaGGCCTGGGCATCAGAAGTG | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQLITPS*AWASEV Trigger: CACTTCTGATGCCCAGGCCCAGGATGGTGTTATAAG...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | ATGATGCATGCTAATATAGCAATTAAGGCGCCCATACTGAGTCCAATAGGAAGGCAGTGTGGCGGTCAATaGAAAACCTTATTGGACTGG | + |
Preference number: 4 (lower is better) Translates to: MMHANIAIKAPILSPIGRQCGGQ*KTLLDW Trigger: CCAGTCCAATAAGGTTTTCCATTGACCGCCACACTG...CCTTCCTATTGGACTCAGTATGGGCGCCTTAATTGCTATATTAGCATGCATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | CCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTCTTTCCAGGTCAGTGTaGCGGTCAATGGAAAACCTT | + |
Preference number: 4 (lower is better) Translates to: PHLLHLRGVTLEYYRMLSLSRSV*RSMENL Trigger: AAGGTTTTCCATTGACCGCCACACTGACCTGGAAAG...ACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | TCGACATCAACACCATTTGGAACTGGAGCAAGCCCTTGCCTTGGCATAAACTGCGTTGTTGACCATTTCTaGAAGAAGACTGTACAAGAA | + |
Preference number: 4 (lower is better) Translates to: STSTPFGTGASPCLGINCVVDHF*KKTVQE Trigger: TTCTTGTACAGTCTTCTTCCAGAAATGGTCAACAAC...GCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | AAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCCCTGGGCATCAGAAGTaGTTTCGAATAGTGCTGTCC | + |
Preference number: 4 (lower is better) Translates to: KETITSPLDNIACHTYLIPGHQK*FRIVLS Trigger: GGACAGCACTATTCGAAATCACTTCTGATGCCCAGG...GATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTAAGGAGGTAAGTTGGTaGAGAGAAGACCGGAGGCTC | + |
Preference number: 4 (lower is better) Translates to: AVPVITSHNYTFYSKETIKEVSW*REDRRL Trigger: GAGCCTCCGGTCTTCTCTTCACCAACTTACCTCCTT...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | CTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCAAAATGTAAGGAGGTAAGTTGGTaGAGAGAAGACCGGAGGCTC | + |
Preference number: 4 (lower is better) Translates to: LLPLPLIILPAILISSKCKEVSW*REDRRL Trigger: GAGCCTCCGGTCTTCTCTTCACCAACTTACCTCCTT...ACATTTTGATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGTTATTGGACTGGAAGTaGTATCAGGGTCACGAGCTG | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQLLDWK*YQGHEL Trigger: CAGCTCGTGACCCTGATATCACTTCCAGTCCAATAA...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
||
CDS-3UTR TCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGCACTTACTGTTTGAATaGCTTGGCCGGGTTTTCCAT | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGHLLFE*LGRVFH Trigger: ATGGAAAACCCGGCCAAGTCATTCAAACAGTAAGTG...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR TCA 90 bp | TTGAGTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGCGTCGTCGTAGCGAATaGTGTTTTCTCGAACGTCTT | + |
Preference number: 4 (lower is better) Translates to: LSWQSPPWNGLRTCEYFKRRRSE*CFLERL Trigger: AAGACGTTCGAGAAAACATCATTCGCTACGACGACG...CTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
||
CDS-3UTR TCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGCGTCGTCGTAGCGAATaGTGTTTTCTCGAACGTCTT | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQRRRSE*CFLERL Trigger: AAGACGTTCGAGAAAACATCATTCGCTACGACGACG...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
||
CDS-3UTR GCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGTGTCTTCACTCTGCCTaGTTAGTTCCAAAGGGGATC | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQCLHSA*LVPKGI Trigger: GATCCCCTTTGGAACTAAGCAGGCAGAGTGAAGACA...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
||
CDS-3UTR GCA 90 bp | TTGGGAGAGGAAAATTTGAAGCATGTTTATTGGGTGGGGCATTATGTAAGTATCCGCATGTCTTCACTCTaGCTGCTTAGTTCCAAAGGG | + |
Preference number: 4 (lower is better) Translates to: LGEENLKHVYWVGHYVSIRMSSL*LLSSKG Trigger: CCCTTTGGAACTAAGCAGGCAGAGTGAAGACATGCG...GATACTTACATAATGCCCCACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR CCA 90 bp | TTGGGAGAGGAAAATTTGAAGCATGTTTATTGGGTGGGGCATTATGTAAGTATCAAACCCAGCCTCTTTTaGAGCGGCTCAAAATCCGCA | + |
Preference number: 4 (lower is better) Translates to: LGEENLKHVYWVGHYVSIKPSLF*SGSKSA Trigger: TGCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTT...GATACTTACATAATGCCCCACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | TTGAGTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGACTGTTTCCATAAACTaGGTCGTCAGCATCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: LSWQSPPWNGLRTCEYFKTVSIN*VVSISG Trigger: GCCACTGATGCTGACGACCCAGTTTATGGAAACAGT...CTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTACACCATCCTGGGCCTaGGCATCAGAAGTGATTTCG | + |
Preference number: 4 (lower is better) Translates to: AVPVITSHNYTFYSKETITPSWA*ASEVIS Trigger: CGAAATCACTTCTGATGCCCAGGCCCAGGATGGTGT...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR CCA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCTTATAACACCATCCTaGGCCTGGGCATCAGAAGTG | + |
Preference number: 4 (lower is better) Translates to: YTFYSKETITSPLDNIACLITPS*AWASEV Trigger: CACTTCTGATGCCCAGGCCCAGGATGGTGTTATAAG...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | TTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTTCACGAGCTGTCACTTaGCCAATCACAGAGTTCAAA | + |
Preference number: 4 (lower is better) Translates to: LLHLRGVTLEYYRMLSAISRAVT*PITEFK Trigger: TTTGAACTCTGTGATTGGCCAAGTGACAGCTCGTGA...AATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR CCA 90 bp | ATGATGCATGCTAATATAGCAATTAAGGCGCCCATACTGAGTCCAATAGGAAGGTCACGAGCTGTCACTTaGCCAATCACAGAGTTCAAA | + |
Preference number: 4 (lower is better) Translates to: MMHANIAIKAPILSPIGRSRAVT*PITEFK Trigger: TTTGAACTCTGTGATTGGCCAAGTGACAGCTCGTGA...CCTTCCTATTGGACTCAGTATGGGCGCCTTAATTGCTATATTAGCATGCATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTCACGAGCTGTCACTTaGCCAATCACAGAGTTCAAA | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGSRAVT*PITEFK Trigger: TTTGAACTCTGTGATTGGCCAAGTGACAGCTCGTGA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGCAGTGTGGCGGTCAATaGAAAACCTTATTGGACTGG | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQQCGGQ*KTLLDW Trigger: CCAGTCCAATAAGGTTTTCCATTGACCGCCACACTG...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGCTTTCCAGGTCAGTGTaGCGGTCAATGGAAAACCTT | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQLSRSV*RSMENL Trigger: AAGGTTTTCCATTGACCGCCACACTGACCTGGAAAG...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | GGAAATGCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGAACACCATTTGGAACTaGAGCAAGCCCTTGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: GNAVPVITSHNYTFYSKENTIWN*SKPLPW Trigger: CCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTT...CTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGCATTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR CCA 90 bp | CATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTGATTATAGCCATAAATCTGTATaGAGTCATATGGTGGGGCCG | + |
Preference number: 4 (lower is better) Translates to: HLRGVTLEYYRMLSAIDYSHKSV*SHMVGP Trigger: CGGCCCCACCATATGACTCCATACAGATTTATGGCT...ATAATCAATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR CCA 90 bp | ATGCATAGTCCAGCAAGTTTGGCCTGCTTGAAAATCTCTAAATATTCCTTTTCACGCTGCTTTTCTTCCTaGCTGTGCCTGTTTCAGGCT | + |
Preference number: 4 (lower is better) Translates to: MHSPASLACLKISKYSFSRCFSS*LCLFQA Trigger: AGCCTGAAACAGGCACAGCCAGGAAGAAAAGCAGCG...TGAAAAGGAATATTTAGAGATTTTCAAGCAGGCCAAACTTGCTGGACTATGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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3UTR CAA 72 bp | ATCGACATCAACACCATTTGGAACTGGAGCAAGCCCTaGCCTTGGCATAAACTGCAAATCTGGTTTAATATC | + |
Preference number: 4 (lower is better) Translates to: IDINTIWNWSKP*PWHKLQIWFNI Trigger: GATATTAAACCAGATTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | CATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTGATTATTCCAGGACAAACATTTaGTTCCAAACCCAGCCTCTT | + |
Preference number: 4 (lower is better) Translates to: HLRGVTLEYYRMLSAIDYSRTNI*FQTQPL Trigger: AAGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGA...ATAATCAATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGTCCAGGACAAACATTTaGTTCCAAACCCAGCCTCTT | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQSRTNI*FQTQPL Trigger: AAGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGA...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR TCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTCCCATCTCCATCAATaGTGTCATAGGATGATTGTG | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGSHLHQ*CHRMIV Trigger: CACAATCATCCTATGACATCATTGATGGAGATGGGA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR TCA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATATTATTGGACTGGAAGTaGTATCAGGGTCACGAGCTG | + |
Preference number: 4 (lower is better) Translates to: LSTLKRLLPLPLIILPAILLDWK*YQGHEL Trigger: CAGCTCGTGACCCTGATATCACTTCCAGTCCAATAA...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGCTTGCTTCTGGCGGTTaGATCCATTATGTTTTGCCA | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQLASGG*IHYVLP Trigger: TGGCAAAACATAATGGATTCAACCGCCAGAAGCAAG...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR GCA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATATGTCTTCACTCTGCCTaGTTAGTTCCAAAGGGGATC | + |
Preference number: 4 (lower is better) Translates to: LSTLKRLLPLPLIILPAICLHSA*LVPKGI Trigger: GATCCCCTTTGGAACTAAGCAGGCAGAGTGAAGACA...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | ATGCATAGTCCAGCAAGTTTGGCCTGCTTGAAAATCTCTAAATATTCCTTTTCACGCATGTCTTCACTCTaGCTGCTTAGTTCCAAAGGG | + |
Preference number: 4 (lower is better) Translates to: MHSPASLACLKISKYSFSRMSSL*LLSSKG Trigger: CCCTTTGGAACTAAGCAGGCAGAGTGAAGACATGCG...TGAAAAGGAATATTTAGAGATTTTCAAGCAGGCCAAACTTGCTGGACTATGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR GCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGAGTGGTTCATTTTTGTaGCTCCTCAGGGTAACAAAC | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGSGSFL*LLRVTN Trigger: GTTTGTTACCCTGAGGAGGCACAAAAATGAACCACT...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR GCA 90 bp | TTGGGAGAGGAAAATTTGAAGCATGTTTATTGGGTGGGGCATTATGTAAGTATCACTGGAGCAAGCCCTTaGCTTGGCATAAACTGCAAA | + |
Preference number: 4 (lower is better) Translates to: LGEENLKHVYWVGHYVSITGASP*LGINCK Trigger: TTTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGT...GATACTTACATAATGCCCCACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR GCA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCGTGGGGTCATTATCTaGCTCATGCAGCCTTACATT | + |
Preference number: 4 (lower is better) Translates to: YTFYSKETITSPLDNIACRGVII*LMQPYI Trigger: AATGTAAGGCTGCATGAGGCAGATAATGACCCCACG...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR GCA 90 bp | AACAGCCATTTCAGGGTTTCAAAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTTTTTCTTCCTGGCTGTaGCTGTTTCAGGCTCAATGG | + |
Preference number: 4 (lower is better) Translates to: NSHFRVSKKVVKVAQSRTFSSWL*LFQAQW Trigger: CCATTGAGCCTGAAACAGGCACAGCCAGGAAGAAAA...AGTCCTGCTTTGTGCTACTTTTACAACTTTCTTTGAAACCCTGAAATGGCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR CCA 90 bp | AAATACCAACTGCTTTGGTATTTGGGCAAAACCTTATTAGCAGTTTTCCTAAGCAAACCCAGCCTCTTTTaGAGCGGCTCAAAATCCGCA | + |
Preference number: 4 (lower is better) Translates to: KYQLLWYLGKTLLAVFLSKPSLF*SGSKSA Trigger: TGCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTT...GCTTAGGAAAACTGCTAATAAGGTTTTGCCCAAATACCAAAGCAGTTGGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR CCA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATAAACCCAGCCTCTTTTaGAGCGGCTCAAAATCCGCA | + |
Preference number: 4 (lower is better) Translates to: YSKETITSPLDNIACHTYKPSLF*SGSKSA Trigger: TGCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTT...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTTATAACACCATCCTaGGCCTGGGCATCAGAAGTG | + |
Preference number: 4 (lower is better) Translates to: YSKETITSPLDNIACHTYLITPS*AWASEV Trigger: CACTTCTGATGCCCAGGCCCAGGATGGTGTTATAAG...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTCTTTGAAGTCACTGTaGTCCATAGTCCCTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGSLKSL*SIVPFF Trigger: GAAGAAAGGGACTATGGACCACAGTGACTTCAAAGA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR TCA 90 bp | TTGAGTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGCACATCTTCTGGTACTaGGAAGTGATACAAACTCTG | + |
Preference number: 4 (lower is better) Translates to: LSWQSPPWNGLRTCEYFKHIFWY*EVIQTL Trigger: CAGAGTTTGTATCACTTCTCAGTACCAGAAGATGTG...CTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAACTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | CATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTGATTATCACATCTTCTGGTACTaGGAAGTGATACAAACTCTG | + |
Preference number: 4 (lower is better) Translates to: HLRGVTLEYYRMLSAIDYHIFWY*EVIQTL Trigger: CAGAGTTTGTATCACTTCTCAGTACCAGAAGATGTG...ATAATCAATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGCACATCTTCTGGTACTaGGAAGTGATACAAACTCTG | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQHIFWY*EVIQTL Trigger: CAGAGTTTGTATCACTTCTCAGTACCAGAAGATGTG...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR TCA 90 bp | ATAGCCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTTCCCATCTCCATCAATaGTGTCATAGGATGATTGTG | + |
Preference number: 4 (lower is better) Translates to: IATFVASKGSDPRILQNASHLHQ*CHRMIV Trigger: CACAATCATCCTATGACATCATTGATGGAGATGGGA...AGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTTTATTGGACTGGAAGTaGTATCAGGGTCACGAGCTG | + |
Preference number: 4 (lower is better) Translates to: AVPVITSHNYTFYSKETILLDWK*YQGHEL Trigger: CAGCTCGTGACCCTGATATCACTTCCAGTCCAATAA...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | AAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCCACTTACTGTTTGAATaGCTTGGCCGGGTTTTCCAT | + |
Preference number: 4 (lower is better) Translates to: KETITSPLDNIACHTYLIHLLFE*LGRVFH Trigger: ATGGAAAACCCGGCCAAGTCATTCAAACAGTAAGTG...GATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR TCA 90 bp | TTGGGAGAGGAAAATTTGAAGCATGTTTATTGGGTGGGGCATTATGTAAGTATCCTTGCTTCTGGCGGTTaGATCCATTATGTTTTGCCA | + |
Preference number: 4 (lower is better) Translates to: LGEENLKHVYWVGHYVSILASGG*IHYVLP Trigger: TGGCAAAACATAATGGATTCAACCGCCAGAAGCAAG...GATACTTACATAATGCCCCACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR TCA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCTTGCTTCTGGCGGTTaGATCCATTATGTTTTGCCA | + |
Preference number: 4 (lower is better) Translates to: YTFYSKETITSPLDNIACLASGG*IHYVLP Trigger: TGGCAAAACATAATGGATTCAACCGCCAGAAGCAAG...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR GCA 90 bp | AAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTGGGTGTTCATTACTTATGATGTGTCTTCACTCTGCCTaGTTAGTTCCAAAGGGGATC | + |
Preference number: 4 (lower is better) Translates to: KKVVKVAQSRTGCSLLMMCLHSA*LVPKGI Trigger: GATCCCCTTTGGAACTAAGCAGGCAGAGTGAAGACA...CATCATAAGTAATGAACACCCAGTCCTGCTTTGTGCTACTTTTACAACTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR GCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTTATTTGAAAGATTGTaGCAGCTCCATCACCCGATA | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGLFERL*QLHHPI Trigger: TATCGGGTGATGGAGCTGGCACAATCTTTCAAATAA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR GCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGGATGTGGATATTGGCTaGTTCCACCTTCAGAGTATA | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQDVDIG*FHLQSI Trigger: TATACTCTGAAGGTGGAAGCAGCCAATATCCACATC...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR GCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGGACAATTTTGACTGTTaGTGTATCCTTAAAGGGTCC | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGDNFDC*CILKGS Trigger: GGACCCTTTAAGGATACAGCAACAGTCAAAATTGTC...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
||
CDS-3UTR CCA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATACTGTTTCCATAAACTaGGTCGTCAGCATCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: YSKETITSPLDNIACHTYTVSIN*VVSISG Trigger: GCCACTGATGCTGACGACCCAGTTTATGGAAACAGT...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | AAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTGGGTGTTCATTACTTATGATGACTGTTTCCATAAACTaGGTCGTCAGCATCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: KKVVKVAQSRTGCSLLMMTVSIN*VVSISG Trigger: GCCACTGATGCTGACGACCCAGTTTATGGAAACAGT...CATCATAAGTAATGAACACCCAGTCCTGCTTTGTGCTACTTTTACAACTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR CCA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTCAGTGTGGCGGTCAATaGAAAACCTTATTGGACTGG | + |
Preference number: 4 (lower is better) Translates to: AVPVITSHNYTFYSKETIQCGGQ*KTLLDW Trigger: CCAGTCCAATAAGGTTTTCCATTGACCGCCACACTG...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTCTTTCCAGGTCAGTGTaGCGGTCAATGGAAAACCTT | + |
Preference number: 4 (lower is better) Translates to: AVPVITSHNYTFYSKETILSRSV*RSMENL Trigger: AAGGTTTTCCATTGACCGCCACACTGACCTGGAAAG...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATTATATACAACGTATGGTCAAAAATGTCCGTTTTTaGGATCGTCTTTGTCCATGG | + |
Preference number: 4 (lower is better) Translates to: DAIQSLLSGANNYIQRMVKNVRF*DRLCPW Trigger: CCATGGACAAAGACGATCCCAAAAACGGACATTTTT...GACCATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | TTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTAAAAATGTCCGTTTTTaGGATCGTCTTTGTCCATGG | + |
Preference number: 4 (lower is better) Translates to: LLHLRGVTLEYYRMLSAIKNVRF*DRLCPW Trigger: CCATGGACAAAGACGATCCCAAAAACGGACATTTTT...AATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGCTTGATGGTGAAATTTaGGTTGTTGACCATTTCTGG | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGLDGEI*VVDHFW Trigger: CCAGAAATGGTCAACAACCCAAATTTCACCATCAAG...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR TCA 90 bp | AAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTGGGTGTTCATTACTTATGATGTCCAGGACAAACATTTaGTTCCAAACCCAGCCTCTT | + |
Preference number: 4 (lower is better) Translates to: KKVVKVAQSRTGCSLLMMSRTNI*FQTQPL Trigger: AAGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGA...CATCATAAGTAATGAACACCCAGTCCTGCTTTGTGCTACTTTTACAACTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR TCA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTCACTTACTGTTTGAATaGCTTGGCCGGGTTTTCCAT | + |
Preference number: 4 (lower is better) Translates to: AVPVITSHNYTFYSKETIHLLFE*LGRVFH Trigger: ATGGAAAACCCGGCCAAGTCATTCAAACAGTAAGTG...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR GCA 90 bp | CCCCAGATAATTAAGCATTTACTGGTTACTCGCCCAGCGTTTCATTTACACATTTTATTTGAAAGATTGTaGCAGCTCCATCACCCGATA | + |
Preference number: 4 (lower is better) Translates to: PQIIKHLLVTRPAFHLHILFERL*QLHHPI Trigger: TATCGGGTGATGGAGCTGGCACAATCTTTCAAATAA...AATGTGTAAATGAAACGCTGGGCGAGTAACCAGTAAATGCTTAATTATCTGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR GCA 90 bp | GATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATTATATACAACGTATGGTCACTGTAAACCAACTTTaGACTGTTTCCATAAACTGG | + |
Preference number: 4 (lower is better) Translates to: DAIQSLLSGANNYIQRMVTVNQL*TVSINW Trigger: CCAGTTTATGGAAACAGTGCAAAGTTGGTTTACAGT...GACCATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | ATGATGCATGCTAATATAGCAATTAAGGCGCCCATACTGAGTCCAATAGGAAGGACTGTAAACCAACTTTaGACTGTTTCCATAAACTGG | + |
Preference number: 4 (lower is better) Translates to: MMHANIAIKAPILSPIGRTVNQL*TVSINW Trigger: CCAGTTTATGGAAACAGTGCAAAGTTGGTTTACAGT...CCTTCCTATTGGACTCAGTATGGGCGCCTTAATTGCTATATTAGCATGCATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATAGATGTGGATATTGGCTaGTTCCACCTTCAGAGTATA | + |
Preference number: 4 (lower is better) Translates to: LSTLKRLLPLPLIILPAIDVDIG*FHLQSI Trigger: TATACTCTGAAGGTGGAAGCAGCCAATATCCACATC...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCGATGTGGATATTGGCTaGTTCCACCTTCAGAGTATA | + |
Preference number: 4 (lower is better) Translates to: YTFYSKETITSPLDNIACDVDIG*FHLQSI Trigger: TATACTCTGAAGGTGGAAGCAGCCAATATCCACATC...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | GATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATTATATACAACGTATGGTCTATCTTCCCATCATCTaGATTGATGTTGAACTGTCT | + |
Preference number: 4 (lower is better) Translates to: DAIQSLLSGANNYIQRMVYLPII*IDVELS Trigger: AGACAGTTCAACATCAATGCAGATGATGGGAAGATA...GACCATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | CCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGAATCCATTATGTTTTaGCAGAATGCTCAGGGAATT | + |
Preference number: 4 (lower is better) Translates to: PHLLHLRGVTLEYYRMLSESIMF*QNAQGI Trigger: AATTCCCTGAGCATTCTGGCAAAACATAATGGATTC...ACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR GCA 90 bp | GGAAATGCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGAGTGGTTCATTTTTGTaGCTCCTCAGGGTAACAAAC | + |
Preference number: 4 (lower is better) Translates to: GNAVPVITSHNYTFYSKESGSFL*LLRVTN Trigger: GTTTGTTACCCTGAGGAGGCACAAAAATGAACCACT...CTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGCATTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR CCA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACACTCTGAGCAAATTTTaGAGGATTGTCATTAACATC | + |
Preference number: 4 (lower is better) Translates to: SHLLVLICFCSLRRSAHHTLSKF*RIVINI Trigger: GATGTTAATGACAATCCTCCAAAATTTGCTCAGAGT...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTTCACGAGCTGTCACTTaGCCAATCACAGAGTTCAAA | + |
Preference number: 4 (lower is better) Translates to: AVPVITSHNYTFYSKETISRAVT*PITEFK Trigger: TTTGAACTCTGTGATTGGCCAAGTGACAGCTCGTGA...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGAATGGAAAACCTTATTaGACTGGAAGTGATATCAGG | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGNGKPY*TGSDIR Trigger: CCTGATATCACTTCCAGTCCAATAAGGTTTTCCATT...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGAAAAATGTCCGTTTTTaGGATCGTCTTTGTCCATGG | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQKNVRF*DRLCPW Trigger: CCATGGACAAAGACGATCCCAAAAACGGACATTTTT...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | GCCAACAATTATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCTCCATTAATTCCATCTaGGTTTTGCAAAGTTGCAAT | + |
Preference number: 4 (lower is better) Translates to: ANNYIQRMVTVPCNLGGLSINSI*VLQSCN Trigger: ATTGCAACTTTGCAAAACCCAGATGGAATTAATGGA...GAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATAATTGTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR CCA 90 bp | GATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATTATATACAACGTATGGTCCATAAACTGCAAATCTaGTTTAATATCCTTACGGGG | + |
Preference number: 4 (lower is better) Translates to: DAIQSLLSGANNYIQRMVHKLQI*FNILTG Trigger: CCCCGTAAGGATATTAAACCAGATTTGCAGTTTATG...GACCATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR CCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGCATAAACTGCAAATCTaGTTTAATATCCTTACGGGG | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGHKLQI*FNILTG Trigger: CCCCGTAAGGATATTAAACCAGATTTGCAGTTTATG...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | ATAAAAACCATTTGCACTCATAAGAATCCTTACAGAAGACACATATCAGCAGCAGACATCAACACCATTTaGAACTGGAGCAAGCCCTTG | + |
Preference number: 4 (lower is better) Translates to: IKTICTHKNPYRRHISAADINTI*NWSKPL Trigger: CAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTC...TGCTGCTGATATGTGTCTTCTGTAAGGATTCTTATGAGTGCAAATGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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3UTR CAA 72 bp | CTATTTGAGAGAAATTATCTACTTGTGAAGTTGCTATaGAGGCTTGGCTGGCCTGAAACACATTCTTGCTCA | + |
Preference number: 4 (lower is better) Translates to: LFERNYLLVKLL*RLGWPETHSCS Trigger: TGAGCAAGAATGTGTTTCAGGCCAGCCAAGCCTCAATAGCAACTTCACAAGTAGATAATTTCTCTCAAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR TCA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCACATCTTCTGGTACTaGGAAGTGATACAAACTCTG | + |
Preference number: 4 (lower is better) Translates to: YSKETITSPLDNIACHTYHIFWY*EVIQTL Trigger: CAGAGTTTGTATCACTTCTCAGTACCAGAAGATGTG...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR TCA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTTCCCATCTCCATCAATaGTGTCATAGGATGATTGTG | + |
Preference number: 4 (lower is better) Translates to: AVPVITSHNYTFYSKETISHLHQ*CHRMIV Trigger: CACAATCATCCTATGACATCATTGATGGAGATGGGA...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | CCCCAGATAATTAAGCATTTACTGGTTACTCGCCCAGCGTTTCATTTACACATTACTGTAAACCAACTTTaGACTGTTTCCATAAACTGG | + |
Preference number: 4 (lower is better) Translates to: PQIIKHLLVTRPAFHLHITVNQL*TVSINW Trigger: CCAGTTTATGGAAACAGTGCAAAGTTGGTTTACAGT...AATGTGTAAATGAAACGCTGGGCGAGTAACCAGTAAATGCTTAATTATCTGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR GCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGACTGTAAACCAACTTTaGACTGTTTCCATAAACTGG | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQTVNQL*TVSINW Trigger: CCAGTTTATGGAAACAGTGCAAAGTTGGTTTACAGT...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR GCA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTGATGTGGATATTGGCTaGTTCCACCTTCAGAGTATA | + |
Preference number: 4 (lower is better) Translates to: AVPVITSHNYTFYSKETIDVDIG*FHLQSI Trigger: TATACTCTGAAGGTGGAAGCAGCCAATATCCACATC...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATAGACAATTTTGACTGTTaGTGTATCCTTAAAGGGTCC | + |
Preference number: 4 (lower is better) Translates to: LSTLKRLLPLPLIILPAIDNFDC*CILKGS Trigger: GGACCCTTTAAGGATACAGCAACAGTCAAAATTGTC...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | GGAAATGCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGGACAATTTTGACTGTTaGTGTATCCTTAAAGGGTCC | + |
Preference number: 4 (lower is better) Translates to: GNAVPVITSHNYTFYSKEDNFDC*CILKGS Trigger: GGACCCTTTAAGGATACAGCAACAGTCAAAATTGTC...CTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGCATTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | AAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCGACAATTTTGACTGTTaGTGTATCCTTAAAGGGTCC | + |
Preference number: 4 (lower is better) Translates to: KETITSPLDNIACHTYLIDNFDC*CILKGS Trigger: GGACCCTTTAAGGATACAGCAACAGTCAAAATTGTC...GATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGTATCTTCCCATCATCTaGATTGATGTTGAACTGTCT | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQYLPII*IDVELS Trigger: AGACAGTTCAACATCAATGCAGATGATGGGAAGATA...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR GCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGGAATCCATTATGTTTTaGCAGAATGCTCAGGGAATT | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQESIMF*QNAQGI Trigger: AATTCCCTGAGCATTCTGGCAAAACATAATGGATTC...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGGTTGTTGACCATTTCTaGAAGAAGACTGTACAAGAA | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQVVDHF*KKTVQE Trigger: TTCTTGTACAGTCTTCTTCCAGAAATGGTCAACAAC...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | AAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCCTTGATGGTGAAATTTaGGTTGTTGACCATTTCTGG | + |
Preference number: 4 (lower is better) Translates to: KETITSPLDNIACHTYLILDGEI*VVDHFW Trigger: CCAGAAATGGTCAACAACCCAAATTTCACCATCAAG...GATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTGATGGTGAAATTTaGGTTGTTGACCATTTCTGG | + |
Preference number: 4 (lower is better) Translates to: LSTLKRLLPLPLIILPAILDGEI*VVDHFW Trigger: CCAGAAATGGTCAACAACCCAAATTTCACCATCAAG...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTCCATTAATTCCATCTaGGTTTTGCAAAGTTGCAAT | + |
Preference number: 4 (lower is better) Translates to: VKILPISTRSQRPLNIQGSINSI*VLQSCN Trigger: ATTGCAACTTTGCAAAACCCAGATGGAATTAATGGA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | AACAGCCATTTCAGGGTTTCAAAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTCTGTTTTCTCACTGCTaGCTTCAAATTAGAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: NSHFRVSKKVVKVAQSRTLFSHC*LQIRAS Trigger: AGAAGCTCTAATTTGAAGCCAGCAGTGAGAAAACAG...AGTCCTGCTTTGTGCTACTTTTACAACTTTCTTTGAAACCCTGAAATGGCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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3UTR CAA 72 bp | TGCTGTGTTCAATATCAGACAGTAACTGTTAAAATATaGCCCATATCCACACGGTCCCAGAGACCTTTAAAT | + |
Preference number: 4 (lower is better) Translates to: CCVQYQTVTVKI*PISTRSQRPLN Trigger: ATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAACACAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR TCA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCACTTACTGTTTGAATaGCTGATCTCAGTAGCAATG | + |
Preference number: 4 (lower is better) Translates to: YSKETITSPLDNIACHTYHLLFE*LISVAM Trigger: CATTGCTACTGAGATCAGTCATTCAAACAGTAAGTG...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTTTATTTGAAAGATTGTaGCAGCTCCATCACCCGATA | + |
Preference number: 4 (lower is better) Translates to: AVPVITSHNYTFYSKETILFERL*QLHHPI Trigger: TATCGGGTGATGGAGCTGGCACAATCTTTCAAATAA...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCACTGTAAACCAACTTTaGACTGTTTCCATAAACTGG | + |
Preference number: 4 (lower is better) Translates to: YTFYSKETITSPLDNIACTVNQL*TVSINW Trigger: CCAGTTTATGGAAACAGTGCAAAGTTGGTTTACAGT...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCTATCTTCCCATCATCTaGATTGATGTTGAACTGTCT | + |
Preference number: 4 (lower is better) Translates to: YTFYSKETITSPLDNIACYLPII*IDVELS Trigger: AGACAGTTCAACATCAATGCAGATGATGGGAAGATA...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | AAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCGAATCCATTATGTTTTaGCAGAATGCTCAGGGAATT | + |
Preference number: 4 (lower is better) Translates to: KETITSPLDNIACHTYLIESIMF*QNAQGI Trigger: AATTCCCTGAGCATTCTGGCAAAACATAATGGATTC...GATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR CCA 90 bp | ACATTTATAAATTCATCGACATCAACACCATTTGGAACTGGAGCAAGCCCTTGCACTCTGAGCAAATTTTaGAGGATTGTCATTAACATC | + |
Preference number: 4 (lower is better) Translates to: TFINSSTSTPFGTGASPCTLSKF*RIVINI Trigger: GATGTTAATGACAATCCTCCAAAATTTGCTCAGAGT...GCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGATGAATTTATAAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGACTCTGAGCAAATTTTaGAGGATTGTCATTAACATC | + |
Preference number: 4 (lower is better) Translates to: VQYQTVTVKILPISTRSQTLSKF*RIVINI Trigger: GATGTTAATGACAATCCTCCAAAATTTGCTCAGAGT...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CCA 90 bp | AAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCAATGGAAAACCTTATTaGACTGGAAGTGATATCAGG | + |
Preference number: 4 (lower is better) Translates to: KETITSPLDNIACHTYLINGKPY*TGSDIR Trigger: CCTGATATCACTTCCAGTCCAATAAGGTTTTCCATT...GATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | AAAGATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATTATATACAACGTATGAATGGAAAACCTTATTaGACTGGAAGTGATATCAGG | + |
Preference number: 4 (lower is better) Translates to: KDAIQSLLSGANNYIQRMNGKPY*TGSDIR Trigger: CCTGATATCACTTCCAGTCCAATAAGGTTTTCCATT...CATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATAAATGGAAAACCTTATTaGACTGGAAGTGATATCAGG | + |
Preference number: 4 (lower is better) Translates to: LSTLKRLLPLPLIILPAINGKPY*TGSDIR Trigger: CCTGATATCACTTCCAGTCCAATAAGGTTTTCCATT...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATAAAAATGTCCGTTTTTaGGATCGTCTTTGTCCATGG | + |
Preference number: 4 (lower is better) Translates to: YSKETITSPLDNIACHTYKNVRF*DRLCPW Trigger: CCATGGACAAAGACGATCCCAAAAACGGACATTTTT...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | TTGGGAGAGGAAAATTTGAAGCATGTTTATTGGGTGGGGCATTATGTAAGTATCGTTGTTGACCATTTCTaGAAGAAGACTGTACAAGAA | + |
Preference number: 4 (lower is better) Translates to: LGEENLKHVYWVGHYVSIVVDHF*KKTVQE Trigger: TTCTTGTACAGTCTTCTTCCAGAAATGGTCAACAAC...GATACTTACATAATGCCCCACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCGTTGTTGACCATTTCTaGAAGAAGACTGTACAAGAA | + |
Preference number: 4 (lower is better) Translates to: YTFYSKETITSPLDNIACVVDHF*KKTVQE Trigger: TTCTTGTACAGTCTTCTTCCAGAAATGGTCAACAAC...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | ATAAAAACCATTTGCACTCATAAGAATCCTTACAGAAGACACATATCAGCAGCATTATTTGAAAGATTGTaGCAGCTCCATCACCCGATA | + |
Preference number: 4 (lower is better) Translates to: IKTICTHKNPYRRHISAALFERL*QLHHPI Trigger: TATCGGGTGATGGAGCTGGCACAATCTTTCAAATAA...TGCTGCTGATATGTGTCTTCTGTAAGGATTCTTATGAGTGCAAATGGTTTTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR GCA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATTGCCTTGGCATAAACTaGAAATCTGGTTTAATATCC | + |
Preference number: 4 (lower is better) Translates to: YSKETITSPLDNIACHTYCLGIN*KSGLIS Trigger: GGATATTAAACCAGATTTGCAGTTTATGCCAAGGCA...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR CCA 90 bp | GGAAATGCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTCTGAGCAAATTTTaGAGGATTGTCATTAACATC | + |
Preference number: 4 (lower is better) Translates to: GNAVPVITSHNYTFYSKETLSKF*RIVINI Trigger: GATGTTAATGACAATCCTCCAAAATTTGCTCAGAGT...CTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGCATTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CCA 90 bp | TTGGGAGAGGAAAATTTGAAGCATGTTTATTGGGTGGGGCATTATGTAAGTATCTCCATTAATTCCATCTaGGTTTTGCAAAGTTGCAAT | + |
Preference number: 4 (lower is better) Translates to: LGEENLKHVYWVGHYVSISINSI*VLQSCN Trigger: ATTGCAACTTTGCAAAACCCAGATGGAATTAATGGA...GATACTTACATAATGCCCCACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR GCA 90 bp | ATAAAAACCATTTGCACTCATAAGAATCCTTACAGAAGACACATATCAGCAGCATATCTTCCCATCATCTaGATTGATGTTGAACTGTCT | + |
Preference number: 4 (lower is better) Translates to: IKTICTHKNPYRRHISAAYLPII*IDVELS Trigger: AGACAGTTCAACATCAATGCAGATGATGGGAAGATA...TGCTGCTGATATGTGTCTTCTGTAAGGATTCTTATGAGTGCAAATGGTTTTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR CAA 72 bp | ACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATaGCCTGCCATACTTATCTCATCAAAATGTACATGT | + |
Preference number: 4 (lower is better) Translates to: TLKRLLPLPLII*PAILISSKCTC Trigger: ACATGTACATTTTGATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR CAA 72 bp | ACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTaGATAATATTGCCTGCCATACTTATCTCATCAAAA | + |
Preference number: 4 (lower is better) Translates to: TLSTLKRLLPLP*IILPAILISSK Trigger: TTTTGATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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3UTR CAA 72 bp | ACCTTATTAGCAGTTTTCCTAAGCACAAACTGCCACTaGTTATACTGCCATCACATTTTTAGAACTCTTTCT | + |
Preference number: 4 (lower is better) Translates to: TLLAVFLSTNCH*LYCHHIFRTLS Trigger: AGAAAGAGTTCTAAAAATGTGATGGCAGTATAACAAGTGGCAGTTTGTGCTTAGGAAAACTGCTAATAAGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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3UTR CAA 72 bp | TCTGTTTCAGCATTCCATGAAGACTCCATTATTATCTaGATTTTTCTAAAAGGGAGCCATTCATTACATGGT | + |
Preference number: 4 (lower is better) Translates to: SVSAFHEDSIII*IFLKGSHSLHG Trigger: ACCATGTAATGAATGGCTCCCTTTTAGAAAAATCAAGATAATAATGGAGTCTTCATGGAATGCTGAAACAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR CAA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACCAAACCCAGCCTCTTTaGGAGCGGCTCAAAATCCGC | + |
Preference number: 5 (lower is better) Translates to: SHLLVLICFCSLRRSAHHQTQPL*ERLKIR Trigger: GCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTTG...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | TTGAATGGCATTTCTCTCCTCCCACCTTTGAGTTGGCAATCCCCACCCTGGAATTGTCCACCCATATCTTaGGCTTGTATTACGACCAGG | + |
Preference number: 5 (lower is better) Translates to: LNGISLLPPLSWQSPPWNCPPIS*ACITTR Trigger: CCTGGTCGTAATACAAGCCAAAGATATGGGTGGACA...ATTCCAGGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGAAATGCCATTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GGAGGCCTCCCCAATCTCCATAAAGTCATAACGTACAGCAGACCAAAGTATTGCCTTCAAGGAGGTAAGTaGGTGAAGAGAAGACCGGAG | + |
Preference number: 5 (lower is better) Translates to: GGLPNLHKVITYSRPKYCLQGGK*VKRRPE Trigger: CTCCGGTCTTCTCTTCACCAACTTACCTCCTTGAAG...GCAATACTTTGGTCTGCTGTACGTTATGACTTTATGGAGATTGGGGAGGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GGAGGCCTCCCCAATCTCCATAAAGTCATAACGTACAGCAGACCAAAGTATTGCCGACATCAACACCATTaGGAACTGGAGCAAGCCCTT | + |
Preference number: 5 (lower is better) Translates to: GGLPNLHKVITYSRPKYCRHQHH*ELEQAL Trigger: AAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCG...GCAATACTTTGGTCTGCTGTACGTTATGACTTTATGGAGATTGGGGAGGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS CCA 90 bp | TCAAAGTCCAGAGGCTTTCTCAGTCTTATAACACCATCCTGGGCCTaGGCATCAGAAGTGATTTCGAATAGTGCTGTCCCATCTCCATCA | + |
Preference number: 5 (lower is better) Translates to: SKSRGFLSLITPSWA*ASEVISNSAVPSPS Trigger: TGATGGAGATGGGACAGCACTATTCGAAATCACTTCTGATGCCCAGGCCCAGGATGGTGTTATAAGACTGAGAAAGCCTCTGGACTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS CCA 90 bp | TTGGTCTCAAAGTCCAGAGGCTTTCTCAGTCTTATAACACCATCCTaGGCCTGGGCATCAGAAGTGATTTCGAATAGTGCTGTCCCATCT | + |
Preference number: 5 (lower is better) Translates to: LVSKSRGFLSLITPS*AWASEVISNSAVPS Trigger: AGATGGGACAGCACTATTCGAAATCACTTCTGATGCCCAGGCCCAGGATGGTGTTATAAGACTGAGAAAGCCTCTGGACTTTGAGACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | TTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTCAAACCCAGCCTCTTTaGGAGCGGCTCAAAATCCGC | + |
Preference number: 5 (lower is better) Translates to: LLHLRGVTLEYYRMLSAIQTQPL*ERLKIR Trigger: GCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTTG...AATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGCAAACCCAGCCTCTTTaGGAGCGGCTCAAAATCCGC | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGQTQPL*ERLKIR Trigger: GCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTTG...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | TCCCAATCTCTGACTGTGGCCGTCAGGATAATATCAAATATCCAAAGACTTCTATGGACCACGCCATCATaGCTACAGCCACAGACTCGG | + |
Preference number: 5 (lower is better) Translates to: SQSLTVAVRIISNIQRLLWTTPS*LQPQTR Trigger: CCGAGTCTGTGGCTGTAGCAATGATGGCGTGGTCCA...TAGAAGTCTTTGGATATTTGATATTATCCTGACGGCCACAGTCAGAGATTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGTGGACCACGCCATCATaGCTACAGCCACAGACTCGG | + |
Preference number: 5 (lower is better) Translates to: VQYQTVTVKILPISTRSQWTTPS*LQPQTR Trigger: CCGAGTCTGTGGCTGTAGCAATGATGGCGTGGTCCA...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | TTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTGGGTCGATGTGGATATaGGCTGCTTCCACCTTCAGA | + |
Preference number: 5 (lower is better) Translates to: LLHLRGVTLEYYRMLSAIGSMWI*AASTFR Trigger: TCTGAAGGTGGAAGCAGCCAATATCCACATCGACCC...AATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGGGGTCGATGTGGATATaGGCTGCTTCCACCTTCAGA | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGGSMWI*AASTFR Trigger: TCTGAAGGTGGAAGCAGCCAATATCCACATCGACCC...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACCTTCAAGGAGGTAAGTaGGTGAAGAGAAGACCGGAG | + |
Preference number: 5 (lower is better) Translates to: SHLLVLICFCSLRRSAHHLQGGK*VKRRPE Trigger: CTCCGGTCTTCTCTTCACCAACTTACCTCCTTGAAG...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTGGCAATCCCCACCCTGGAATGGATTACGAACATGTGAATATTTTAAGGCTCCTCTGTCCAGTGGAGTaGCCAGTGTTATCTTCCCAT | + |
Preference number: 5 (lower is better) Translates to: VGNPHPGMDYEHVNILRLLCPVE*PVLSSH Trigger: ATGGGAAGATAACACTGGCAACTCCACTGGACAGAG...GAGCCTTAAAATATTCACATGTTCGTAATCCATTCCAGGGTGGGGATTGCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GGAGGCCTCCCCAATCTCCATAAAGTCATAACGTACAGCAGACCAAAGTATTGCTCTTGCTTCTGGCGGTaGAATCCATTATGTTTTGCC | + |
Preference number: 5 (lower is better) Translates to: GGLPNLHKVITYSRPKYCSCFWR*NPLCFA Trigger: GGCAAAACATAATGGATTCAACCGCCAGAAGCAAGA...GCAATACTTTGGTCTGCTGTACGTTATGACTTTATGGAGATTGGGGAGGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACCAGAAGGTAGACTTCTaGCTTCTGGCGGTTGAATCC | + |
Preference number: 5 (lower is better) Translates to: SHLLVLICFCSLRRSAHHQKVDF*LLAVES Trigger: GGATTCAACCGCCAGAAGCAAGAAGTCTACCTTCTG...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | GGAGGCCTCCCCAATCTCCATAAAGTCATAACGTACAGCAGACCAAAGTATTGCCTGGGTTTTGCAAAGTaGCAATGTCAAAAGCCTCTG | + |
Preference number: 5 (lower is better) Translates to: GGLPNLHKVITYSRPKYCLGFAK*QCQKPL Trigger: CAGAGGCTTTTGACATTGCAACTTTGCAAAACCCAG...GCAATACTTTGGTCTGCTGTACGTTATGACTTTATGGAGATTGGGGAGGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | AAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCTCTCTCCTCCCACCTTaGAGTTGGCAATCCCCACCG | + |
Preference number: 5 (lower is better) Translates to: KETITSPLDNIACHTYLISLLPP*SWQSPP Trigger: CGGTGGGGATTGCCAACTCAAAGGTGGGAGGAGAGA...GATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093249.11 |
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CDS-3UTR CAA 90 bp | AAAGATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATTATATACAACGTATGCAAACCCAGCCTCTTTaGGAGCGGCTCAAAATCCGC | + |
Preference number: 5 (lower is better) Translates to: KDAIQSLLSGANNYIQRMQTQPL*ERLKIR Trigger: GCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTTG...CATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GGAGGCCTCCCCAATCTCCATAAAGTCATAACGTACAGCAGACCAAAGTATTGCTCTCGGTCAAGTCTTTaGATAGCATGGATATCTCCA | + |
Preference number: 5 (lower is better) Translates to: GGLPNLHKVITYSRPKYCSRSSL*IAWISP Trigger: TGGAGATATCCATGCTATCAAAAGACTTGACCGAGA...GCAATACTTTGGTCTGCTGTACGTTATGACTTTATGGAGATTGGGGAGGCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACTGTCCACCCATATCTTaGGCTTGTATTACGACCAGG | + |
Preference number: 5 (lower is better) Translates to: SHLLVLICFCSLRRSAHHCPPIS*ACITTR Trigger: CCTGGTCGTAATACAAGCCAAAGATATGGGTGGACA...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGCTTCAAGGAGGTAAGTaGGTGAAGAGAAGACCGGAG | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGLQGGK*VKRRPE Trigger: CTCCGGTCTTCTCTTCACCAACTTACCTCCTTGAAG...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGGTCACGAGCTGTCACTaGGCCAATCACAGAGTTCAA | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGVTSCH*ANHRVQ Trigger: TTGAACTCTGTGATTGGCCAAGTGACAGCTCGTGAC...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGCTCTGTCCAGTGGAGTaGCCAGTGTTATCTTCCCAT | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGLCPVE*PVLSSH Trigger: ATGGGAAGATAACACTGGCAACTCCACTGGACAGAG...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATTGGACCACGCCATCATaGCTACAGCCACAGACTCGG | + |
Preference number: 5 (lower is better) Translates to: YSKETITSPLDNIACHTYWTTPS*LQPQTR Trigger: CCGAGTCTGTGGCTGTAGCAATGATGGCGTGGTCCA...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | AAGAAAGTTGTAAAAGTAGCACAAAGCAGGACTGGGTGTTCATTACTTATGATGCAAACCCAGCCTCTTTaGGAGCGGCTCAAAATCCGC | + |
Preference number: 5 (lower is better) Translates to: KKVVKVAQSRTGCSLLMMQTQPL*ERLKIR Trigger: GCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTTG...CATCATAAGTAATGAACACCCAGTCCTGCTTTGTGCTACTTTTACAACTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
||
CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTGTCCACCCATATCTTaGGCTTGTATTACGACCAGG | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGCPPIS*ACITTR Trigger: CCTGGTCGTAATACAAGCCAAAGATATGGGTGGACA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
||
CDS-3UTR CAA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCGGGTCGATGTGGATATaGGCTGCTTCCACCTTCAGA | + |
Preference number: 5 (lower is better) Translates to: YTFYSKETITSPLDNIACGSMWI*AASTFR Trigger: TCTGAAGGTGGAAGCAGCCAATATCCACATCGACCC...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | TATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCCCCAATCTCTTTTTGGGATCGTCTTaGTCCATGGCACTTACTGTT | + |
Preference number: 5 (lower is better) Translates to: YIQRMVTVPCNLGGLPNLFLGSS*SMALTV Trigger: AACAGTAAGTGCCATGGACAAAGACGATCCCAAAAA...GAGATTGGGGAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR CAA 90 bp | GGAGGCCTCCCCAATCTCCATAAAGTCATAACGTACAGCAGACCAAAGTATTGCGTGAAATTTGGGTTGTaGACCATTTCTGGAAGAAGA | + |
Preference number: 5 (lower is better) Translates to: GGLPNLHKVITYSRPKYCVKFGL*TISGRR Trigger: TCTTCTTCCAGAAATGGTCAACAACCCAAATTTCAC...GCAATACTTTGGTCTGCTGTACGTTATGACTTTATGGAGATTGGGGAGGCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
||
CDS-3UTR CAA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGCAGAAGGTAGACTTCTaGCTTCTGGCGGTTGAATCC | + |
Preference number: 5 (lower is better) Translates to: VQYQTVTVKILPISTRSQQKVDF*LLAVES Trigger: GGATTCAACCGCCAGAAGCAAGAAGTCTACCTTCTG...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
||
CDS-3UTR CAA 90 bp | TCACATCTTCTAGTGCTGATCTGCTTTTGTAGTCTAAGACGTTCTGCGCATCACCTGGGTTTTGCAAAGTaGCAATGTCAAAAGCCTCTG | + |
Preference number: 5 (lower is better) Translates to: SHLLVLICFCSLRRSAHHLGFAK*QCQKPL Trigger: CAGAGGCTTTTGACATTGCAACTTTGCAAAACCCAG...GTGATGCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
||
CDS-3UTR CAA 90 bp | CATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTGATTATAACTGGAGCAAGCCCTaGCCTTGGCATAAACTGCAA | + |
Preference number: 5 (lower is better) Translates to: HLRGVTLEYYRMLSAIDYNWSKP*PWHKLQ Trigger: TTGCAGTTTATGCCAAGGCAAGGGCTTGCTCCAGTT...ATAATCAATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
||
CDS-3UTR CAA 90 bp | CCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTTTCCAGGACAAACATTaGATTCCAAACCCAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: PHLLHLRGVTLEYYRMLSFQDKH*IPNPAS Trigger: AGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGAA...ACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTTCCAGGACAAACATTaGATTCCAAACCCAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGFQDKH*IPNPAS Trigger: AGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGAA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTGGGTCGATGTGGATATaGGCTGCTTCCACCTTCAGA | + |
Preference number: 5 (lower is better) Translates to: AVPVITSHNYTFYSKETIGSMWI*AASTFR Trigger: TCTGAAGGTGGAAGCAGCCAATATCCACATCGACCC...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GGAAATGCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGGTCACGAGCTGTCACTaGGCCAATCACAGAGTTCAA | + |
Preference number: 5 (lower is better) Translates to: GNAVPVITSHNYTFYSKEVTSCH*ANHRVQ Trigger: TTGAACTCTGTGATTGGCCAAGTGACAGCTCGTGAC...CTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGCATTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | TTGGGAGAGGAAAATTTGAAGCATGTTTATTGGGTGGGGCATTATGTAAGTATCCTCTGTCCAGTGGAGTaGCCAGTGTTATCTTCCCAT | + |
Preference number: 5 (lower is better) Translates to: LGEENLKHVYWVGHYVSILCPVE*PVLSSH Trigger: ATGGGAAGATAACACTGGCAACTCCACTGGACAGAG...GATACTTACATAATGCCCCACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GCCAACAATTATATACAACGTATGGTCACCGTACCATGTAATCTAGGAGGCCTCTACTGTTTGAATGACTaGGCCGGGTTTTCCATTTTC | + |
Preference number: 5 (lower is better) Translates to: ANNYIQRMVTVPCNLGGLYCLND*AGFSIF Trigger: GAAAATGGAAAACCCGGCCAAGTCATTCAAACAGTA...GAGGCCTCCTAGATTACATGGTACGGTGACCATACGTTGTATATAATTGTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTCTTGCTTCTGGCGGTaGAATCCATTATGTTTTGCC | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGSCFWR*NPLCFA Trigger: GGCAAAACATAATGGATTCAACCGCCAGAAGCAAGA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
||
CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGCTGGGTTTTGCAAAGTaGCAATGTCAAAAGCCTCTG | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGLGFAK*QCQKPL Trigger: CAGAGGCTTTTGACATTGCAACTTTGCAAAACCCAG...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | CCCCAGATAATTAAGCATTTACTGGTTACTCGCCCAGCGTTTCATTTACACATTCATTTATTTGAAAGATaGTGCCAGCTCCATCACCCG | + |
Preference number: 5 (lower is better) Translates to: PQIIKHLLVTRPAFHLHIHLFER*CQLHHP Trigger: CGGGTGATGGAGCTGGCACAATCTTTCAAATAAATG...AATGTGTAAATGAAACGCTGGGCGAGTAACCAGTAAATGCTTAATTATCTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR CAA 90 bp | ACATTTATAAATTCATCGACATCAACACCATTTGGAACTGGAGCAAGCCCTTGCCATTTATTTGAAAGATaGTGCCAGCTCCATCACCCG | + |
Preference number: 5 (lower is better) Translates to: TFINSSTSTPFGTGASPCHLFER*CQLHHP Trigger: CGGGTGATGGAGCTGGCACAATCTTTCAAATAAATG...GCAAGGGCTTGCTCCAGTTCCAAATGGTGTTGATGTCGATGAATTTATAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGCATTTATTTGAAAGATaGTGCCAGCTCCATCACCCG | + |
Preference number: 5 (lower is better) Translates to: VQYQTVTVKILPISTRSQHLFER*CQLHHP Trigger: CGGGTGATGGAGCTGGCACAATCTTTCAAATAAATG...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | TTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTTCTCGGTCAAGTCTTTaGATAGCATGGATATCTCCA | + |
Preference number: 5 (lower is better) Translates to: LLHLRGVTLEYYRMLSAISRSSL*IAWISP Trigger: TGGAGATATCCATGCTATCAAAAGACTTGACCGAGA...AATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | CCACATTTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTACCCATATCTTTGGCTaGTATTACGACCAGGTATTC | + |
Preference number: 5 (lower is better) Translates to: PHLLHLRGVTLEYYRMLSTHIFG*YYDQVF Trigger: GAATACCTGGTCGTAATACAAGCCAAAGATATGGGT...ACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAAATGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATATGTCCACCCATATCTTaGGCTTGTATTACGACCAGG | + |
Preference number: 5 (lower is better) Translates to: LSTLKRLLPLPLIILPAICPPIS*ACITTR Trigger: CCTGGTCGTAATACAAGCCAAAGATATGGGTGGACA...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTCTTCAAGGAGGTAAGTaGGTGAAGAGAAGACCGGAG | + |
Preference number: 5 (lower is better) Translates to: AVPVITSHNYTFYSKETILQGGK*VKRRPE Trigger: CTCCGGTCTTCTCTTCACCAACTTACCTCCTTGAAG...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATGTCACGAGCTGTCACTaGGCCAATCACAGAGTTCAA | + |
Preference number: 5 (lower is better) Translates to: YSKETITSPLDNIACHTYVTSCH*ANHRVQ Trigger: TTGAACTCTGTGATTGGCCAAGTGACAGCTCGTGAC...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATTATATACAACGTATGGTCTTCCCATCATCTGCATaGATGTTGAACTGTCTTTCC | + |
Preference number: 5 (lower is better) Translates to: DAIQSLLSGANNYIQRMVFPSSA*MLNCLS Trigger: GGAAAGACAGTTCAACATCAATGCAGATGATGGGAA...GACCATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTTCCCATCATCTGCATaGATGTTGAACTGTCTTTCC | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGFPSSA*MLNCLS Trigger: GGAAAGACAGTTCAACATCAATGCAGATGATGGGAA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | CTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCAAAATGTCTCTGTCCAGTGGAGTaGCCAGTGTTATCTTCCCAT | + |
Preference number: 5 (lower is better) Translates to: LLPLPLIILPAILISSKCLCPVE*PVLSSH Trigger: ATGGGAAGATAACACTGGCAACTCCACTGGACAGAG...ACATTTTGATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGTTTTTGGGATCGTCTTaGTCCATGGCACTTACTGTT | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGFLGSS*SMALTV Trigger: AACAGTAAGTGCCATGGACAAAGACGATCCCAAAAA...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | GAAAATAGTCCAAAAGTTTCTCTGGGAAATGCTGTTCCTGTAATCACCAGTCACTCTTGCTTCTGGCGGTaGAATCCATTATGTTTTGCC | + |
Preference number: 5 (lower is better) Translates to: ENSPKVSLGNAVPVITSHSCFWR*NPLCFA Trigger: GGCAAAACATAATGGATTCAACCGCCAGAAGCAAGA...GTGACTGGTGATTACAGGAACAGCATTTCCCAGAGAAACTTTTGGACTATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCAGAAGGTAGACTTCTaGCTTCTGGCGGTTGAATCC | + |
Preference number: 5 (lower is better) Translates to: YSKETITSPLDNIACHTYQKVDF*LLAVES Trigger: GGATTCAACCGCCAGAAGCAAGAAGTCTACCTTCTG...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGATAAGTGGTTCATTTTaGTGCCTCCTCAGGGTAACA | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGISGSF*CLLRVT Trigger: TGTTACCCTGAGGAGGCACAAAAATGAACCACTTAT...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTAGACACAGCCTGTTaGAATGGCATTTCTCTCCTC | + |
Preference number: 5 (lower is better) Translates to: LSTLKRLLPLPLIILPAILDTAC*NGISLL Trigger: GAGGAGAGAAATGCCATTCAAACAGGCTGTGTCTAG...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093249.11 |
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CDS-3UTR CAA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACATTTATTTGAAAGATaGTGCCAGCTCCATCACCCG | + |
Preference number: 5 (lower is better) Translates to: LSTLKRLLPLPLIILPAIHLFER*CQLHHP Trigger: CGGGTGATGGAGCTGGCACAATCTTTCAAATAAATG...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | CCCCAGATAATTAAGCATTTACTGGTTACTCGCCCAGCGTTTCATTTACACATTTCTCGGTCAAGTCTTTaGATAGCATGGATATCTCCA | + |
Preference number: 5 (lower is better) Translates to: PQIIKHLLVTRPAFHLHISRSSL*IAWISP Trigger: TGGAGATATCCATGCTATCAAAAGACTTGACCGAGA...AATGTGTAAATGAAACGCTGGGCGAGTAACCAGTAAATGCTTAATTATCTGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR CAA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGTCTCGGTCAAGTCTTTaGATAGCATGGATATCTCCA | + |
Preference number: 5 (lower is better) Translates to: VQYQTVTVKILPISTRSQSRSSL*IAWISP Trigger: TGGAGATATCCATGCTATCAAAAGACTTGACCGAGA...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGACCCATATCTTTGGCTaGTATTACGACCAGGTATTC | + |
Preference number: 5 (lower is better) Translates to: VQYQTVTVKILPISTRSQTHIFG*YYDQVF Trigger: GAATACCTGGTCGTAATACAAGCCAAAGATATGGGT...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGTACTGTTTGAATGACTaGGCCGGGTTTTCCATTTTC | + |
Preference number: 5 (lower is better) Translates to: VQYQTVTVKILPISTRSQYCLND*AGFSIF Trigger: GAAAATGGAAAACCCGGCCAAGTCATTCAAACAGTA...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | GAAAATAGTCCAAAAGTTTCTCTGGGAAATGCTGTTCCTGTAATCACCAGTCACTTTTTGGGATCGTCTTaGTCCATGGCACTTACTGTT | + |
Preference number: 5 (lower is better) Translates to: ENSPKVSLGNAVPVITSHFLGSS*SMALTV Trigger: AACAGTAAGTGCCATGGACAAAGACGATCCCAAAAA...GTGACTGGTGATTACAGGAACAGCATTTCCCAGAGAAACTTTTGGACTATTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | ACGAGCAGCAAAATGATGCATGCTAATATAGCAATTAAGGCGCCCATACTGAGTGTGAAATTTGGGTTGTaGACCATTTCTGGAAGAAGA | + |
Preference number: 5 (lower is better) Translates to: TSSKMMHANIAIKAPILSVKFGL*TISGRR Trigger: TCTTCTTCCAGAAATGGTCAACAACCCAAATTTCAC...ACTCAGTATGGGCGCCTTAATTGCTATATTAGCATGCATCATTTTGCTGCTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTAAAATATTGCCCATATCCACACGGTCCCAGAGACCTTTAAATATACAGGGGGTGAAATTTGGGTTGTaGACCATTTCTGGAAGAAGA | + |
Preference number: 5 (lower is better) Translates to: VKILPISTRSQRPLNIQGVKFGL*TISGRR Trigger: TCTTCTTCCAGAAATGGTCAACAACCCAAATTTCAC...CCCCTGTATATTTAAAGGTCTCTGGGACCGTGTGGATATGGGCAATATTTTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | GCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGACTATTTTCCAGGACAAACATTaGATTCCAAACCCAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: AVPVITSHNYTFYSKETIFQDKH*IPNPAS Trigger: AGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGAA...AATAGTCTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | CTCCATAAAGTCATAACGTACAGCAGACCAAAGTATTGCTTTATCATTTGTGACTTCCAGGACAAACATTaGATTCCAAACCCAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: LHKVITYSRPKYCFIICDFQDKH*IPNPAS Trigger: AGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGAA...GTCACAAATGATAAAGCAATACTTTGGTCTGCTGTACGTTATGACTTTATGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | AAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCTCTCGGTCAAGTCTTTaGATAGCATGGATATCTCCA | + |
Preference number: 5 (lower is better) Translates to: KETITSPLDNIACHTYLISRSSL*IAWISP Trigger: TGGAGATATCCATGCTATCAAAAGACTTGACCGAGA...GATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCACCCATATCTTTGGCTaGTATTACGACCAGGTATTC | + |
Preference number: 5 (lower is better) Translates to: YTFYSKETITSPLDNIACTHIFG*YYDQVF Trigger: GAATACCTGGTCGTAATACAAGCCAAAGATATGGGT...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | AAAGATGCTATTCAGTCTCTGTTGAGTGGGGCCAACAATTATATACAACGTATGACCCATATCTTTGGCTaGTATTACGACCAGGTATTC | + |
Preference number: 5 (lower is better) Translates to: KDAIQSLLSGANNYIQRMTHIFG*YYDQVF Trigger: GAATACCTGGTCGTAATACAAGCCAAAGATATGGGT...CATACGTTGTATATAATTGTTGGCCCCACTCAACAGAGACTGAATAGCATCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | AAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCTTCCCATCATCTGCATaGATGTTGAACTGTCTTTCC | + |
Preference number: 5 (lower is better) Translates to: KETITSPLDNIACHTYLIFPSSA*MLNCLS Trigger: GGAAAGACAGTTCAACATCAATGCAGATGATGGGAA...GATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATATACTGTTTGAATGACTaGGCCGGGTTTTCCATTTTC | + |
Preference number: 5 (lower is better) Translates to: LSTLKRLLPLPLIILPAIYCLND*AGFSIF Trigger: GAAAATGGAAAACCCGGCCAAGTCATTCAAACAGTA...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | GGAAATGCTGTTCCTGTAATCACCAGTCACAATTACACTTTCTACTCTAAAGAGTTTTTGGGATCGTCTTaGTCCATGGCACTTACTGTT | + |
Preference number: 5 (lower is better) Translates to: GNAVPVITSHNYTFYSKEFLGSS*SMALTV Trigger: AACAGTAAGTGCCATGGACAAAGACGATCCCAAAAA...CTCTTTAGAGTAGAAAGTGTAATTGTGACTGGTGATTACAGGAACAGCATTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGATGGTGAAATTTGGGTaGTTGACCATTTCTGGAAGA | + |
Preference number: 5 (lower is better) Translates to: VQYQTVTVKILPISTRSQMVKFG*LTISGR Trigger: TCTTCCAGAAATGGTCAACAACCCAAATTTCACCAT...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | TTGGGAGAGGAAAATTTGAAGCATGTTTATTGGGTGGGGCATTATGTAAGTATCATAAGTGGTTCATTTTaGTGCCTCCTCAGGGTAACA | + |
Preference number: 5 (lower is better) Translates to: LGEENLKHVYWVGHYVSIISGSF*CLLRVT Trigger: TGTTACCCTGAGGAGGCACAAAAATGAACCACTTAT...GATACTTACATAATGCCCCACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | TTGTTGCATCTAAGGGGAGTGACCCTAGAATATTACAGAATGCTCAGTGCCATTAATTCCATCTGGGTTTaGCAAAGTTGCAATGTCAAA | + |
Preference number: 5 (lower is better) Translates to: LLHLRGVTLEYYRMLSAINSIWV*QSCNVK Trigger: TTTGACATTGCAACTTTGCAAAACCCAGATGGAATT...AATGGCACTGAGCATTCTGTAATATTCTAGGGTCACTCCCCTTAGATGCAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128860.8 |
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CDS-3UTR CAA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGACCTCTCCTTTCCTTTaGAAGTCCTGGCTTATTTTT | + |
Preference number: 5 (lower is better) Translates to: VQYQTVTVKILPISTRSQTSPFL*KSWLIF Trigger: AAAAATAAGCCAGGACTTCAAAAGGAAAGGAGAGGT...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | ATACCTCACACAACCAGGTATCTGAGTGTAGAGGTAATAAATATGCATGTATTATTCCAGGACAAACATTaGATTCCAAACCCAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: IPHTTRYLSVEVINMHVLFQDKH*IPNPAS Trigger: AGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGGAA...TAATACATGCATATTTATTACCTCTACACTCAGATACCTGGTTGTGTGAGGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142475.3 |
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CDS-3UTR CAA 90 bp | TACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATTTCCCATCATCTGCATaGATGTTGAACTGTCTTTCC | + |
Preference number: 5 (lower is better) Translates to: YSKETITSPLDNIACHTYFPSSA*MLNCLS Trigger: GGAAAGACAGTTCAACATCAATGCAGATGATGGGAA...ATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | TACACTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCGTGAAATTTGGGTTGTaGACCATTTCTGGAAGAAGA | + |
Preference number: 5 (lower is better) Translates to: YTFYSKETITSPLDNIACVKFGL*TISGRR Trigger: TCTTCTTCCAGAAATGGTCAACAACCCAAATTTCAC...GCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | CTTTCTACTCTAAAGAGACTATTACCTCTCCCCTTGATAATATTGCCTGCCATAATGGTGAAATTTGGGTaGTTGACCATTTCTGGAAGA | + |
Preference number: 5 (lower is better) Translates to: LSTLKRLLPLPLIILPAIMVKFG*LTISGR Trigger: TCTTCCAGAAATGGTCAACAACCCAAATTTCACCAT...TATGGCAGGCAATATTATCAAGGGGAGAGGTAATAGTCTCTTTAGAGTAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | TCTGCCTCATGCAGCCTTACATTTATAAATTCATCGACATCAACACCATTTGGAATGGTGAAATTTGGGTaGTTGACCATTTCTGGAAGA | + |
Preference number: 5 (lower is better) Translates to: SASCSLTFINSSTSTPFGMVKFG*LTISGR Trigger: TCTTCCAGAAATGGTCAACAACCCAAATTTCACCAT...TCCAAATGGTGTTGATGTCGATGAATTTATAAATGTAAGGCTGCATGAGGCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | GTTCAATATCAGACAGTAACTGTTAAAATATTGCCCATATCCACACGGTCCCAGAATTCCATCTGGGTTTaGCAAAGTTGCAATGTCAAA | + |
Preference number: 5 (lower is better) Translates to: VQYQTVTVKILPISTRSQNSIWV*QSCNVK Trigger: TTTGACATTGCAACTTTGCAAAACCCAGATGGAATT...CTGGGACCGTGTGGATATGGGCAATATTTTAACAGTTACTGTCTGATATTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155527.8 |
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CDS-3UTR CAA 90 bp | CTATTACCTCTCCCCTTGATAATATTGCCTGCCATACTTATCTCATCAAAATGTATGGTGAAATTTGGGTaGTTGACCATTTCTGGAAGA | + |
Preference number: 5 (lower is better) Translates to: LLPLPLIILPAILISSKCMVKFG*LTISGR Trigger: TCTTCCAGAAATGGTCAACAACCCAAATTTCACCAT...ACATTTTGATGAGATAAGTATGGCAGGCAATATTATCAAGGGGAGAGGTAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000145601.8 |
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CDS-3UTR CAA 90 bp | TTGGGAGAGGAAAATTTGAAGCATGTTTATTGGGTGGGGCATTATGTAAGTATCAATTCCATCTGGGTTTaGCAAAGTTGCAATGTCAAA | + |
Preference number: 5 (lower is better) Translates to: LGEENLKHVYWVGHYVSINSIWV*QSCNVK Trigger: TTTGACATTGCAACTTTGCAAAACCCAGATGGAATT...GATACTTACATAATGCCCCACCCAATAAACATGCTTCAAATTTTCCTCTCCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 |
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CDS TCA 72 bp | GGCTCAAGGGGCTTGTTTGTCTCAAAGTCCACTGCCTaGGCCGTTAACGTATATTCAGCCTTTTCCTCTCGG | + |
Preference number: 6 (lower is better) Translates to: GSRGLFVSKSTA*AVNVYSAFSSR Trigger: CCGAGAGGAAAAGGCTGAATATACGTTAACGGCTCAGGCAGTGGACTTTGAGACAAACAAGCCCCTTGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000142475.3 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS CCA 72 bp | CCAGGACAAACATTTGATTCCAAACCCAGCCTCTTTTaGAGCGGCTCAAAATCCGCATGTCTTCACTCTGCC | + |
Preference number: 6 (lower is better) Translates to: PGQTFDSKPSLF*SGSKSACLHSA Trigger: GGCAGAGTGAAGACATGCGGATTTTGAGCCGCTCCAAAAGAGGCTGGGTTTGGAATCAAATGTTTGTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000142475.3 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS CAA 90 bp | GGTGAAGAGAAGACCGGAGGCTCATCAGCATCCTCTACGACAATTTaGACTGTTGCTGTATCCTTAAAGGGTCCCCTGCTACTGAAACGT | + |
Preference number: 6 (lower is better) Translates to: GEEKTGGSSASSTTI*TVAVSLKGPLLLKR Trigger: ACGTTTCAGTAGCAGGGGACCCTTTAAGGATACAGCAACAGTCAAAATTGTCGTAGAGGATGCTGATGAGCCTCCGGTCTTCTCTTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS CCA 72 bp | AGAGGCTTTCTCAGTCTTATAACACCATCCTGGGCCTaGGCATCAGAAGTGATTTCGAATAGTGCTGTCCCA | + |
Preference number: 6 (lower is better) Translates to: RGFLSLITPSWA*ASEVISNSAVP Trigger: TGGGACAGCACTATTCGAAATCACTTCTGATGCCCAGGCCCAGGATGGTGTTATAAGACTGAGAAAGCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS CAA 72 bp | AGTGGAGTTGCCAGTGTTATCTTCCCATCATCTGCATaGATGTTGAACTGTCTTTCCAGGTCAGTGTGGCGG | + |
Preference number: 6 (lower is better) Translates to: SGVASVIFPSSA*MLNCLSRSVWR Trigger: CCGCCACACTGACCTGGAAAGACAGTTCAACATCAATGCAGATGATGGGAAGATAACACTGGCAACTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS GCA 72 bp | GTCCAGTGGAGTTGCCAGTGTTATCTTCCCATCATCTaGATTGATGTTGAACTGTCTTTCCAGGTCAGTGTG | + |
Preference number: 6 (lower is better) Translates to: VQWSCQCYLPII*IDVELSFQVSV Trigger: CACACTGACCTGGAAAGACAGTTCAACATCAATGCAGATGATGGGAAGATAACACTGGCAACTCCACTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS CCA 72 bp | AAGTCCAGAGGCTTTCTCAGTCTTATAACACCATCCTaGGCCTGGGCATCAGAAGTGATTTCGAATAGTGCT | + |
Preference number: 6 (lower is better) Translates to: KSRGFLSLITPS*AWASEVISNSA Trigger: AGCACTATTCGAAATCACTTCTGATGCCCAGGCCCAGGATGGTGTTATAAGACTGAGAAAGCCTCTGGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS CAA 72 bp | TGGACTGGAAGTGATATCAGGGTCACGAGCTGTCACTaGGCCAATCACAGAGTTCAAAGCAGCATTTTCATG | + |
Preference number: 6 (lower is better) Translates to: WTGSDIRVTSCH*ANHRVQSSIFM Trigger: CATGAAAATGCTGCTTTGAACTCTGTGATTGGCCAAGTGACAGCTCGTGACCCTGATATCACTTCCAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS CAA 72 bp | GTTGCCAGTGTTATCTTCCCATCATCTGCATTGATGTaGAACTGTCTTTCCAGGTCAGTGTGGCGGTCAATG | + |
Preference number: 6 (lower is better) Translates to: VASVIFPSSALM*NCLSRSVWRSM Trigger: CATTGACCGCCACACTGACCTGGAAAGACAGTTCAACATCAATGCAGATGATGGGAAGATAACACTGGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS TCA 72 bp | TCCTATCGCAGTGCCAAGGACCACATCTTCTGGTACTaGGAAGTGATACAAACTCTGAGCAAATTTTGGAGG | + |
Preference number: 6 (lower is better) Translates to: SYRSAKDHIFWY*EVIQTLSKFWR Trigger: CCTCCAAAATTTGCTCAGAGTTTGTATCACTTCTCAGTACCAGAAGATGTGGTCCTTGGCACTGCGATAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS TCA 72 bp | TCCAGCACTTTAATAGCAACAGGCACTCGAGATATCTaGCTGTGGTTCCTGATCTCAGTAGCAATGATGGTG | + |
Preference number: 6 (lower is better) Translates to: SSTLIATGTRDI*LWFLISVAMMV Trigger: CACCATCATTGCTACTGAGATCAGGAACCACAGTCAGATATCTCGAGTGCCTGTTGCTATTAAAGTGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000155527.8 |
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CDS CCA 72 bp | TCTGCATTGATGTTGAACTGTCTTTCCAGGTCAGTGTaGCGGTCAATGGAAAACCTTATTGGACTGGAAGTG | + |
Preference number: 6 (lower is better) Translates to: SALMLNCLSRSV*RSMENLIGLEV Trigger: CACTTCCAGTCCAATAAGGTTTTCCATTGACCGCCACACTGACCTGGAAAGACAGTTCAACATCAATGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |
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CDS CAA 72 bp | CTGTGGTTCCTGATCTCAGTAGCAATGATGGTGATGTaGTGCCAAACACTTAGTTCTCTGTCCAGTGGAGTT | + |
Preference number: 6 (lower is better) Translates to: LWFLISVAMMVM*CQTLSSLSSGV Trigger: AACTCCACTGGACAGAGAACTAAGTGTTTGGCACAACATCACCATCATTGCTACTGAGATCAGGAACCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000155527.8 |
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CDS CAA 90 bp | AAACCTTATTGGACTGGAAGTGATATCAGGGTCACGAGCTGTCACTaGGCCAATCACAGAGTTCAAAGCAGCATTTTCATGAACTTCAAG | + |
Preference number: 6 (lower is better) Translates to: KPYWTGSDIRVTSCH*ANHRVQSSIFMNFK Trigger: CTTGAAGTTCATGAAAATGCTGCTTTGAACTCTGTGATTGGCCAAGTGACAGCTCGTGACCCTGATATCACTTCCAGTCCAATAAGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000093249.11 ENSMUST00000128860.8 ENSMUST00000142129.8 ENSMUST00000145601.8 ENSMUST00000155527.8 |