Pregenerated sensors for CDH6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039385Ensembl transcript IDs: ENSMUST00000036439.6
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTTCCCAGCACAGACAGGATGCCCCAGATACCACTTTAATTCCTTaGCACACACACACACACACACACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: LSQHRQDAPDTTLIP*HTHTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAAGGAATTAAAGTGGTATCTGGGGCATCCTGTCTGTGCTGGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CCA 90 bp | AAAGTCTCTACCATTGGATCCACACGGACTGCAGCCATTGACTTTTaGACCAGGTACAACGGGAGAACCCCTCACGGAATAGTGGATAAA | + |
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Preference number: 1 (lower is better) Translates to: KVSTIGSTRTAAIDF*TRYNGRTPHGIVDK Trigger: TTTATCCACTATTCCGTGAGGGGTTCTCCCGTTGTACCTGGTCCAAAAGTCAATGGCTGCAGTCCGTGTGGATCCAATGGTAGAGACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 90 bp | CTAGTCTTGTCTGAAATATGGCGGGTAATGGCCTTTGTTTCCGTTTaGCCTCCTCTTAACACTTTCATCTGGTGGCTCTGGCAGGCTAAC | + |
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Preference number: 1 (lower is better) Translates to: LVLSEIWRVMAFVSV*PPLNTFIWWLWQAN Trigger: GTTAGCCTGCCAGAGCCACCAGATGAAAGTGTTAAGAGGAGGTCAAACGGAAACAAAGGCCATTACCCGCCATATTTCAGACAAGACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 90 bp | CAAACAGAACAGCACAGTGGGTTTGAAGTGTTCCTGCGTTTCTTCTaGGCAGATCTATTGGACGTTTGTTGTACAAGCATTCCCCGTGAG | + |
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Preference number: 1 (lower is better) Translates to: QTEQHSGFEVFLRFF*ADLLDVCCTSIPRE Trigger: CTCACGGGGAATGCTTGTACAACAAACGTCCAATAGATCTGCTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CCA 90 bp | GGAACACTTGCACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTTaGAAATTGCTCTTGTCAGCCCTTGGAAATTTAACACCAAACTTC | + |
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Preference number: 1 (lower is better) Translates to: GTLALRGEVNFIPKG*KLLLSALGNLTPNF Trigger: GAAGTTTGGTGTTAAATTTCCAAGGGCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGTGCAAGTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CCA 90 bp | TCAAAGAAATCTGTCCGTGGGGATGTTCTTAACCTGGTATTTTGGTaGGAAGCAGAAATTCAGAGAGAGATGAAGTTGGAGTTCCCATTT | + |
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Preference number: 1 (lower is better) Translates to: SKKSVRGDVLNLVFW*EAEIQREMKLEFPF Trigger: AAATGGGAACTCCAACTTCATCTCTCTCTGAATTTCTGCTTCCCACCAAAATACCAGGTTAAGAACATCCCCACGGACAGATTTCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 90 bp | GCCAGAAGGATTAACTGGGTTCAGTTGGGTCCCCTGGATAATAACTaGCTAAGAGAGCCTAACTGCATAATTAGAGCAATAATAGATTGT | + |
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Preference number: 1 (lower is better) Translates to: ARRINWVQLGPLDNN*LREPNCIIRAIIDC Trigger: ACAATCTATTATTGCTCTAATTATGCAGTTAGGCTCTCTTAGTCAGTTATTATCCAGGGGACCCAACTGAACCCAGTTAATCCTTCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 90 bp | AAGATGTCAAAGGAAGATTTAAAACTCTGCAACCATGATCGTCACTaGACTCTGAGGAGACCACAATGTAATTCCACTCTCTGGCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: KMSKEDLKLCNHDRH*TLRRPQCNSTLWQR Trigger: TCTTTGCCAGAGAGTGGAATTACATTGTGGTCTCCTCAGAGTTCAGTGACGATCATGGTTGCAGAGTTTTAAATCTTCCTTTGACATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 90 bp | TTCAAAGCAGTAAGAATAATTGCAAACAGAACAGCACAGTGGGTTTaGAGTGTTCCTGCGTTTCTTCTGAGCAGATCTATTGGACGTTTG | + |
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Preference number: 1 (lower is better) Translates to: FKAVRIIANRTAQWV*SVPAFLLSRSIGRL Trigger: CAAACGTCCAATAGATCTGCTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCAATTATTCTTACTGCTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR GCA 90 bp | TTTTTAAACTGTATTCCAAATTCCGCAGTTCTCCCGTTCCACAGGTaGCACCTTTACACCTGGGTAACACACCTATTTAAAAGTCAACTA | + |
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Preference number: 1 (lower is better) Translates to: FLNCIPNSAVLPFHR*HLYTWVTHLFKSQL Trigger: TAGTTGACTTTTAAATAGGTGTGTTACCCAGGTGTAAAGGTGGCACCTGTGGAACGGGAGAACTGCGGAATTTGGAATACAGTTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR GCA 90 bp | AAGAATAATTGCAAACAGAACAGCACAGTGGGTTTGAAGTGTTCCTaGGTTTCTTCTGAGCAGATCTATTGGACGTTTGTTGTACAAGCA | + |
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Preference number: 1 (lower is better) Translates to: KNNCKQNSTVGLKCS*VSSEQIYWTFVVQA Trigger: TGCTTGTACAACAAACGTCCAATAGATCTGCTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCAATTATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 90 bp | ATGTTTCTATGGTGCTCAAGGCTGCAGAATCTCAGAATGCCTTGTTaGTATTTTATAAATCCTTTTCCTCTAGGAAATACCTGCTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: MFLWCSRLQNLRMPC*YFINPFPLGNTCFH Trigger: GTGGAAGCAGGTATTTCCTAGAGGAAAAGGATTTATAAAATATCAACAAGGCATTCTGAGATTCTGCAGCCTTGAGCACCATAGAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 90 bp | ATGGGGAGATTAAAGATTGTCTCAGCAATGCTTAAATTAAATCGATaGTGCAGAGACCATAAACTCCTGGCTTTAAAAATGAGCTATTTC | + |
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Preference number: 1 (lower is better) Translates to: MGRLKIVSAMLKLNR*CRDHKLLALKMSYF Trigger: GAAATAGCTCATTTTTAAAGCCAGGAGTTTATGGTCTCTGCATCATCGATTTAATTTAAGCATTGCTGAGACAATCTTTAATCTCCCCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR GCA 90 bp | TTTACATTGCCCAGATTTCCACTCCTAGGGTCTCATGAAATGGTCTaGACATCTTTCCAAATTGATTTATTTACTTATTTGAGGACAAAT | + |
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Preference number: 1 (lower is better) Translates to: FTLPRFPLLGSHEMV*TSFQIDLFTYLRTN Trigger: ATTTGTCCTCAAATAAGTAAATAAATCAATTTGGAAAGATGTGCAGACCATTTCATGAGACCCTAGGAGTGGAAATCTGGGCAATGTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CAA 90 bp | CCTTTCCCAGCACAGACAGGATGCCCCAGATACCACTTTAATTCCTaGACACACACACACACACACACACACACACACACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: PFPAQTGCPRYHFNS*THTHTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAAGGAATTAAAGTGGTATCTGGGGCATCCTGTCTGTGCTGGGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR GCA 90 bp | AATTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGATGTAGGAGCAGGGAATaGTGGCTTCCACCAACATCT | + |
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Preference number: 2 (lower is better) Translates to: NYLADNSTSFQGTLALRGCRSRE*WLPPTS Trigger: AGATGTTGGTGGAAGCCAGCATTCCCTGCTCCTACA...TCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR CCA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCAGGAGCAGGGAATGCTaGCTTCCACCAACATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SFSKHRKLCHVIRKATASRSREC*LPPTSQ Trigger: CTGAGATGTTGGTGGAAGCCAGCATTCCCTGCTCCT...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR TCA 90 bp | TACTTTATCATCATTTCAAAGACAAGGATGGTAGTGTTGCTACCGAAGCCAGTTCTCTCACCTTCCCCTTaGGCTCTAGGGTGGGGTATT | + |
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Preference number: 2 (lower is better) Translates to: YFIIISKTRMVVLLPKPVLSPSP*ALGWGI Trigger: AATACCCCACCCTAGAGCTCAAGGGGAAGGTGAGAG...AACTGGCTTCGGTAGCAACACTACCATCCTTGTCTTTGAAATGATGATAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR GCA 90 bp | TCAACAAAGCAAATGCTAAAGTTGGACCCCTCCTGCTCTCTTGTCATTCTCATTGCTGAAGGGGATCCATaGTCTTCTTCTGTGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: STKQMLKLDPSCSLVILIAEGDP*SSSVSL Trigger: AAGGCTCACAGAAGAAGAGCATGGATCCCCTTCAGC...AATGAGAATGACAAGAGAGCAGGAGGGGTCCAACTTTAGCATTTGCTTTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR CCA 90 bp | AATTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAAAAAGTCTCTACCATTaGATCCACACGGACTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: NYLADNSTSFQGTLALRGKSLYH*IHTDCS Trigger: GCTGCAGTCCGTGTGGATCCAATGGTAGAGACTTTT...TCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR CCA 90 bp | AATTGCAAACAGAACAGCACAGTGGGTTTGAAGTGTTCCTGCGTTTCTTCTGAGAACACTTTCATCTGGTaGCTCTGGCAGGCTAACGTT | + |
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Preference number: 2 (lower is better) Translates to: NCKQNSTVGLKCSCVSSENTFIW*LWQANV Trigger: AACGTTAGCCTGCCAGAGCCACCAGATGAAAGTGTT...CTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR TCA 90 bp | TTGAACCTGCCAGAAGGATTAACTGGGTTCAGTTGGGTCCCCTGGATAATAACTACCACTTTAATTCCTTaGCACACACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: LNLPEGLTGFSWVPWIITTTLIP*HTHTHT Trigger: TGTGTGTGTGTGTGTGTGTCAAGGAATTAAAGTGGT...AGTTATTATCCAGGGGACCCAACTGAACCCAGTTAATCCTTCTGGCAGGTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTTGGAAATTGCTCTTGTCAGCAAGGATTTGACGTTATaGGTGGTTGTTGGTGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: TQRRGQLYPKRLEIALVSKDLTL*VVVGAR Trigger: CCTAGCACCAACAACCACCCATAACGTCAAATCCTT...GCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTTGGAAATTGCTCTTGTCAGCCCTTGGAAATTTAACACCAAACTTCACAGTAGGAACATTCAGCTaGCTGGAGGCCATGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KGWKLLLSALGNLTPNFTVGTFS*LEAMKE Trigger: TTCCTTCATGGCCTCCAGTCAGCTGAATGTTCCTAC...TGTGAAGTTTGGTGTTAAATTTCCAAGGGCTGACAAGAGCAATTTCCAACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR TCA 90 bp | AATTGCAAACAGAACAGCACAGTGGGTTTGAAGTGTTCCTGCGTTTCTTCTGAGATCGTCACTGAACTCTaGGGAGACCACAATGTAATT | + |
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Preference number: 2 (lower is better) Translates to: NCKQNSTVGLKCSCVSSEIVTEL*GDHNVI Trigger: AATTACATTGTGGTCTCCTCAGAGTTCAGTGACGAT...CTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGATCAAGATACAGATAATATGAAAAGTGGGCTGAAAACTGTGTTCTCCCCCCCAGCACAGACAGGATaGCCCAGATACCACTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: VDQDTDNMKSGLKTVFSPPAQTG*PRYHFN Trigger: ATTAAAGTGGTATCTGGGGCATCCTGTCTGTGCTGG...GGGGGAGAACACAGTTTTCAGCCCACTTTTCATATTATCTGTATCTTGATCTAC 43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR GCA 90 bp | AATTGCAAACAGAACAGCACAGTGGGTTTGAAGTGTTCCTGCGTTTCTTCTGAGCTCATTACAGAGGGCTaGTTTTTCTACAACACTGAG | + |
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Preference number: 2 (lower is better) Translates to: NCKQNSTVGLKCSCVSSELITEG*FFYNTE Trigger: CTCAGTGTTGTAGAAAAAGCAGCCCTCTGTAATGAG...CTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR TCA 90 bp | AATTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAGATAAAACCTCACCCTaGAATGGAGATGATACTAAG | + |
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Preference number: 2 (lower is better) Translates to: NYLADNSTSFQGTLALRGDKTSP*NGDDTK Trigger: CTTAGTATCATCTCCATTTCAGGGTGAGGTTTTATC...TCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR CCA 90 bp | CACTATTCGGGATATCCCATCACAAACAGGAAACCATTCAGGAAATACAAAGGGTTTCTCTTCTTCCCTTaGTTTGGTGTGATGGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: HYSGYPITNRKPFRKYKGFLFFP*FGVMVN Trigger: GTTCACCATCACACCAAACCAAGGGAAGAAGAGAAA...CCCTTTGTATTTCCTGAATGGTTTCCTGTTTGTGATGGGATATCCCGAATAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR CCA 90 bp | AATTGCAAACAGAACAGCACAGTGGGTTTGAAGTGTTCCTGCGTTTCTTCTGAGTTTATCCCAAAAGGTTaGAAATTGCTCTTGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: NCKQNSTVGLKCSCVSSEFIPKG*KLLLSA Trigger: GGCTGACAAGAGCAATTTCCAACCTTTTGGGATAAA...CTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR GCA 90 bp | TTGAACCTGCCAGAAGGATTAACTGGGTTCAGTTGGGTCCCCTGGATAATAACTCAAAGAGTTAACATTTaGCTCAGGAAATTCTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: LNLPEGLTGFSWVPWIITQRVNI*LRKFSL Trigger: TAGAGAGAATTTCCTGAGGCAAATGTTAACTCTTTG...AGTTATTATCCAGGGGACCCAACTGAACCCAGTTAATCCTTCTGGCAGGTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CAA 90 bp | TTTCAAAGCAGTAAGAATAATTGCAAACAGAACAGCACAGTGGGTTaGAAGTGTTCCTGCGTTTCTTCTGAGCAGATCTATTGGACGTTT | + |
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Preference number: 2 (lower is better) Translates to: FQSSKNNCKQNSTVG*KCSCVSSEQIYWTF Trigger: AAACGTCCAATAGATCTGCTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCAATTATTCTTACTGCTTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR TCA 90 bp | GTAGATCAAGATACAGATAATATGAAAAGTGGGCTGAAAACTGTGTTCTCCCCCGATGGCACAAAACCTTaGAATTCCCTAAATTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VDQDTDNMKSGLKTVFSPDGTKP*NSLNFP Trigger: AGGGAAATTTAGGGAATTTCAAGGTTTTGTGCCATC...GGGGGAGAACACAGTTTTCAGCCCACTTTTCATATTATCTGTATCTTGATCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR TCA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCCATCTATTCTTGGTATaGTGTGTGATTTTTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SFSKHRKLCHVIRKATASHLFLV*CVIFQG Trigger: ACCCTGAAAAATCACACATCATACCAAGAATAGATG...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR TCA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCTTTGAGGAGTGGAAATaGGAACTAAGCCACATATTT | + |
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Preference number: 2 (lower is better) Translates to: SFSKHRKLCHVIRKATASFEEWK*ELSHIF Trigger: AAATATGTGGCTTAGTTCTCATTTCCACTCCTCAAA...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR TCA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCCTTTTTCTACAACACTaGGTCCATTTCTCATTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SFSKHRKLCHVIRKATASLFLQH*VHFSFV Trigger: GACAAATGAGAAATGGACTCAGTGTTGTAGAAAAAG...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGTACTTTGGAAATTTCTGATGACTGCACACTATGAGAATCTAATGGGGAGATTAACTGGGTTCAGTTaGGTCCCCTGGATAATAACT | + |
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Preference number: 2 (lower is better) Translates to: TVLWKFLMTAHYENLMGRLTGFS*VPWIIT Trigger: AGTTATTATCCAGGGGACCCAACTGAACCCAGTTAA...TCTCCCCATTAGATTCTCATAGTGTGCAGTCATCAGAAATTTCCAAAGTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 72 bp | AGTCTCTACCATTGGATCCACACGGACTGCAGCCATTaGCTTTTGGACCAGGTACAACGGGAGAACCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: SLYHWIHTDCSH*LLDQVQRENPS Trigger: TGAGGGGTTCTCCCGTTGTACCTGGTCCAAAAGTCAATGGCTGCAGTCCGTGTGGATCCAATGGTAGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 72 bp | CCGGGTGTCTCCTCGGCTAAGTGCCCTAGTCTTGTCTaGAATATGGCGGGTAATGGCCTTTGTTTCCGTTTG | + |
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Preference number: 3 (lower is better) Translates to: PGVSSAKCPSLV*NMAGNGLCFRL Trigger: CAAACGGAAACAAAGGCCATTACCCGCCATATTTCAGACAAGACTAGGGCACTTAGCCGAGGAGACACCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR GCA 72 bp | TCCACCAACATCTCAGTGCTAGTCATTTCTTTCCCTTaGTGCAGTGTAGGGATGGCTCCGAGGTCAAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: STNISVLVISFP*CSVGMAPRSKG Trigger: GCCCTTTGACCTCGGAGCCATCCCTACACTGCAGCAAGGGAAAGAAATGACTAGCACTGAGATGTTGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CCA 72 bp | ACCATTGGATCCACACGGACTGCAGCCATTGACTTTTaGACCAGGTACAACGGGAGAACCCCTCACGGAATA | + |
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Preference number: 3 (lower is better) Translates to: TIGSTRTAAIDF*TRYNGRTPHGI Trigger: TATTCCGTGAGGGGTTCTCCCGTTGTACCTGGTCCAAAAGTCAATGGCTGCAGTCCGTGTGGATCCAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CCA 72 bp | ATGGTAGTGTTGCTACCGAAGCCAGTTGGGAAAGCATaGCTGTGTTTGGAAATCGACTGTCCCTGTGACACG | + |
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Preference number: 3 (lower is better) Translates to: MVVLLPKPVGKA*LCLEIDCPCDT Trigger: CGTGTCACAGGGACAGTCGATTTCCAAACACAGCCATGCTTTCCCAACTGGCTTCGGTAGCAACACTACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR-3UTR CAA 90 bp | ACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTTGGAAATTGCTCTTGTCAGCGCTCTCACCTTCCCCTaGAGCTCTAGGGTGGGGTAT | + |
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Preference number: 3 (lower is better) Translates to: TQRRGQLYPKRLEIALVSALTFP*SSRVGY Trigger: ATACCCCACCCTAGAGCTCAAGGGGAAGGTGAGAGC...GCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 72 bp | GTTAGGTTCAAATGTGACTGGCTCTCACCTTCCCCTTaGGCTCTAGGGTGGGGTATTCAATCTACTAAGCCG | + |
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Preference number: 3 (lower is better) Translates to: VRFKCDWLSPSP*ALGWGIQSTKP Trigger: CGGCTTAGTAGATTGAATACCCCACCCTAGAGCTCAAGGGGAAGGTGAGAGCCAGTCACATTTGAACCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 72 bp | GACTGTCCCTGTGACACGAGTCTTAAGCATTCTTGCTaGAGGGGATCCATGCTCTTCTTCTGTGAGCCTTGT | + |
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Preference number: 3 (lower is better) Translates to: DCPCDTSLKHSC*RGSMLFFCEPC Trigger: ACAAGGCTCACAGAAGAAGAGCATGGATCCCCTTCAGCAAGAATGCTTAAGACTCGTGTCACAGGGACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR TCA 72 bp | CACAGACAGGATGCCCCAGATACCACTTTAATTCCTTaGCACACACACACACACACACACACACACACACAC | + |
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Preference number: 3 (lower is better) Translates to: HRQDAPDTTLIP*HTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAAGGAATTAAAGTGGTATCTGGGGCATCCTGTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR GCA 72 bp | TTGGTGCTAGGAACACCTTTCCCAGCACAGACAGGATaGCCCAGATACCACTTTAATTCCTTGACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: LVLGTPFPAQTG*PRYHFNSLTHT Trigger: TGTGTGTGTCAAGGAATTAAAGTGGTATCTGGGGCATCCTGTCTGTGCTGGGAAAGGTGTTCCTAGCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR GCA 72 bp | ACACGAGTCTTAAGCATTCTTGCTGAAGGGGATCCATaGTCTTCTTCTGTGAGCCTTGTAGGAGCAGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TRVLSILAEGDP*SSSVSLVGAGN Trigger: ATTCCCTGCTCCTACAAGGCTCACAGAAGAAGAGCATGGATCCCCTTCAGCAAGAATGCTTAAGACTCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR-3UTR CAA 90 bp | CACTATTCGGGATATCCCATCACAAACAGGAAACCATTCAGGAAATACAAAGGGCACGGACTGCAGCCATaGACTTTTGGACCAGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: HYSGYPITNRKPFRKYKGHGLQP*TFGPGT Trigger: TGTACCTGGTCCAAAAGTCAATGGCTGCAGTCCGTG...CCCTTTGTATTTCCTGAATGGTTTCCTGTTTGTGATGGGATATCCCGAATAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR TCA 72 bp | TCTGAAATATGGCGGGTAATGGCCTTTGTTTCCGTTTaGCCTCCTCTTAACACTTTCATCTGGTGGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SEIWRVMAFVSV*PPLNTFIWWLW Trigger: CCAGAGCCACCAGATGAAAGTGTTAAGAGGAGGTCAAACGGAAACAAAGGCCATTACCCGCCATATTTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR GCA 72 bp | CCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTaGACTCAGAGGAGAGGTCAACTTTATCCCAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGRQLNFLSRNT*TQRRGQLYPKR Trigger: CCTTTTGGGATAAAGTTGACCTCTCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR-3UTR CAA 90 bp | CACTATTCGGGATATCCCATCACAAACAGGAAACCATTCAGGAAATACAAAGGGAAAAAGTCTCTACCATaGGATCCACACGGACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HYSGYPITNRKPFRKYKGKKSLP*DPHGLQ Trigger: CTGCAGTCCGTGTGGATCCAATGGTAGAGACTTTTT...CCCTTTGTATTTCCTGAATGGTTTCCTGTTTGTGATGGGATATCCCGAATAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR-3UTR CAA 90 bp | AATTGCAAACAGAACAGCACAGTGGGTTTGAAGTGTTCCTGCGTTTCTTCTGAGCATGTGAAAGGACATTaGAGTTTGTGGTCCAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: NCKQNSTVGLKCSCVSSEHVKGH*SLWSKG Trigger: ACCCTTGGACCACAAACTCAAATGTCCTTTCACATG...CTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR TCA 72 bp | CAGCACAGTGGGTTTGAAGTGTTCCTGCGTTTCTTCTaGGCAGATCTATTGGACGTTTGTTGTACAAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: QHSGFEVFLRFF*ADLLDVCCTSI Trigger: AATGCTTGTACAACAAACGTCCAATAGATCTGCTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR GCA 72 bp | GTTTGGTGTGATGGTGAACCTTCTATGTTTATCACATaGAACCAAATCGTGTCAGGGAACACACCTTCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VWCDGEPSMFIT*NQIVSGNTPSS Trigger: AGACGAAGGTGTGTTCCCTGACACGATTTGGTTGCATGTGATAAACATAGAAGGTTCACCATCACACCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR GCA 72 bp | TGCAAACAGAACAGCACAGTGGGTTTGAAGTGTTCCTaGGTTTCTTCTGAGCAGATCTATTGGACGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CKQNSTVGLKCS*VSSEQIYWTFV Trigger: AACAAACGTCCAATAGATCTGCTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR CCA 72 bp | CTAAATCATCTTAAAACACGGAAGGATTTGACGTTATaGGTGGTTGTTGGTGCTAGGAACACCTTTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LNHLKTRKDLTL*VVVGARNTFPS Trigger: GCTGGGAAAGGTGTTCCTAGCACCAACAACCACCCATAACGTCAAATCCTTCCGTGTTTTAAGATGATTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR CCA 72 bp | CCTCAAAGAAATCTGTCCGTGGGGATGTTCTTAACCTaGTATTTTGGTGGGAAGCAGAAATTCAGAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PQRNLSVGMFLT*YFGGKQKFRER Trigger: TCTCTCTCTGAATTTCTGCTTCCCACCAAAATACCAGGTTAAGAACATCCCCACGGACAGATTTCTTTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGAACCTGCCAGAAGGATTAACTGGGTTCAGTTGGGTCCCCTGGATAATAACTCAGTCCAGTGTCATATaGGAAAATGAAAAAGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LNLPEGLTGFSWVPWIITQSSVI*ENEKGN Trigger: GTTGCCTTTTTCATTTTCCAATATGACACTGGACTG...AGTTATTATCCAGGGGACCCAACTGAACCCAGTTAATCCTTCTGGCAGGTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGAACCTGCCAGAAGGATTAACTGGGTTCAGTTGGGTCCCCTGGATAATAACTAAGTTAATTATCTCCTaGAGAGCTGATAGACCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LNLPEGLTGFSWVPWIITKLIIS*RADRPG Trigger: TCCTGGTCTATCAGCTCTCAAGGAGATAATTAACTT...AGTTATTATCCAGGGGACCCAACTGAACCCAGTTAATCCTTCTGGCAGGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR GCA 72 bp | CCTCACACGAAAGACCAAGATCTCATTACAGAGGGCTaGTTTTTCTACAACACTGAGTCCATTTCTCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: PHTKDQDLITEG*FFYNTESISHL Trigger: CAAATGAGAAATGGACTCAGTGTTGTAGAAAAAGCAGCCCTCTGTAATGAGATCTTGGTCTTTCGTGTGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR CCA 72 bp | GCACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTTaGAAATTGCTCTTGTCAGCCCTTGGAAATTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: ALRGEVNFIPKG*KLLLSALGNLT Trigger: TGTTAAATTTCCAAGGGCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR-3UTR CAA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCCTCTTGTCATTCTCATaGCCTGTGTCTGTAGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: SFSKHRKLCHVIRKATASLLSFS*PVSVDQ Trigger: TTGATCTACAGACACAGGCAATGAGAATGACAAGAG...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR TCA 72 bp | AAGGAAGATTTAAAACTCTGCAACCATGATCGTCACTaGACTCTGAGGAGACCACAATGTAATTCCACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KEDLKLCNHDRH*TLRRPQCNSTL Trigger: GAGAGTGGAATTACATTGTGGTCTCCTCAGAGTTCAGTGACGATCATGGTTGCAGAGTTTTAAATCTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR-3UTR CAA 90 bp | TACTTTATCATCATTTCAAAGACAAGGATGGTAGTGTTGCTACCGAAGCCAGTTATTTCTCTTCTTCCCTaGGTTTGGTGTGATGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: YFIIISKTRMVVLLPKPVISLLP*VWCDGE Trigger: TTCACCATCACACCAAACCAAGGGAAGAAGAGAAAT...AACTGGCTTCGGTAGCAACACTACCATCCTTGTCTTTGAAATGATGATAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR TCA 72 bp | ATTAACTGGGTTCAGTTGGGTCCCCTGGATAATAACTaGCTAAGAGAGCCTAACTGCATAATTAGAGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: INWVQLGPLDNN*LREPNCIIRAI Trigger: TATTGCTCTAATTATGCAGTTAGGCTCTCTTAGTCAGTTATTATCCAGGGGACCCAACTGAACCCAGTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR CCA 72 bp | TCTTTCTGCCCGTATAATCTGAGAAAGAAGGTTGGGTaGAGTGTTAGTTTAAATACAGTAAACTGCCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SFCPYNLRKKVG*SVSLNTVNCLY Trigger: ATACAGGCAGTTTACTGTATTTAAACTAACACTCCACCCAACCTTCTTTCTCAGATTATACGGGCAGAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR GCA 72 bp | CTACAGGACTCAAATAGTTCAGTTTCTTTGCAGATTTaGTTCCCCAACAATCTTTGCGATAAGACAATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LQDSNSSVSLQI*FPNNLCDKTIN Trigger: ATTTATTGTCTTATCGCAAAGATTGTTGGGGAAGCAAATCTGCAAAGAAACTGAACTATTTGAGTCCTGTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | GGGATGTGGCCGACCGGCTCTAAGGGGACAAGGGCCGTTCCTACCTCTCCTCCCGAACTCAGCAAACTCTaGGGCATTGTCGTTGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: GMWPTGSKGTRAVPTSPPELSKL*GIVVDV Trigger: GACGTCAACGACAATGCCCCAGAGTTTGCTGAGTTC...GGGAGGAGAGGTAGGAACGGCCCTTGTCCCCTTAGAGCCGGTCGGCCACATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR CAA 72 bp | AAGTCTCTACCATTGGATCCACACGGACTGCAGCCATaGACTTTTGGACCAGGTACAACGGGAGAACCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSLPLDPHGLQP*TFGPGTTGEPL Trigger: GAGGGGTTCTCCCGTTGTACCTGGTCCAAAAGTCAATGGCTGCAGTCCGTGTGGATCCAATGGTAGAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | TTGAACCTGCCAGAAGGATTAACTGGGTTCAGTTGGGTCCCCTGGATAATAACTGGCTCTTTCTTTCGCTaGCGCCTCAGAGCTGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LNLPEGLTGFSWVPWIITGSFFR*RLRAAN Trigger: GTTCGCAGCTCTGAGGCGGCAGCGAAAGAAAGAGCC...AGTTATTATCCAGGGGACCCAACTGAACCCAGTTAATCCTTCTGGCAGGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | TTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAGAAATCGGGGTTCGACGTaGGGATTGGAGGCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPGRQLNFLSRNTCTQRRNRGST*GLEAST Trigger: GGTGGAAGCCTCCAATCCCCACGTCGAACCCCGATT...TCTCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR TCA 90 bp | AATTGCAAACAGAACAGCACAGTGGGTTTGAAGTGTTCCTGCGTTTCTTCTGAGGTCCCTCACCGTCAGTaGTGCTGTACTCGATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NCKQNSTVGLKCSCVSSEVPHRQ*CCTRSP Trigger: CGGAGATCGAGTACAGCATCACTGACGGTGAGGGAC...CTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | TTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAGACAGGCACAATGTCCCTaGGCGATTTGCTGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGRQLNFLSRNTCTQRRQAQCP*AICCPP Trigger: TGGAGGACAGCAAATCGCGCAGGGACATTGTGCCTG...TCTCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCCGATGCACAGAAGGATaGCCACCAGAGCCCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFSKHRKLCHVIRKATASRCTEG*PPEPLC Trigger: GCACAGGGGCTCTGGTGGCCATCCTTCTGTGCATCG...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR CAA 72 bp | AATAACCGGGTGTCTCCTCGGCTAAGTGCCCTAGTCTaGTCTGAAATATGGCGGGTAATGGCCTTTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNRVSPRLSALV*SEIWRVMAFVS Trigger: GGAAACAAAGGCCATTACCCGCCATATTTCAGACAAGACTAGGGCACTTAGCCGAGGAGACACCCGGTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR TCA 90 bp | TTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAGATCCCTGTCCTTCTGTTaGCAGCTTGAGCTCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGRQLNFLSRNTCTQRRSLSFC*QLELEG Trigger: TCCTTCGAGCTCAAGCTGTCAACAGAAGGACAGGGA...TCTCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | GTAGATCAAGATACAGATAATATGAAAAGTGGGCTGAAAACTGTGTTCTCCCCCCTGCCGCCTCAGAGCTaGGAACAGCACCACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VDQDTDNMKSGLKTVFSPLPPQS*EQHHCH Trigger: GTGACAGTGGTGCTGTTCGCAGCTCTGAGGCGGCAG...GGGGGAGAACACAGTTTTCAGCCCACTTTTCATATTATCTGTATCTTGATCTAC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCAATTGGCGTTCCCGGTaGAGAGGACTCGGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSKHRKLCHVIRKATASNWRSR*RGLGGL Trigger: AAGACCCCCGAGTCCTCTCCACCGGGAACGCCAATT...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | AATTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGATGCATGTTCCCATGGTaGTCACATGCACAGACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NYLADNSTSFQGTLALRGCMFPW*SHAQTR Trigger: CCGGGTCTGTGCATGTGACCACCATGGGAACATGCA...TCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR TCA 90 bp | TTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAGATGTTTCCGATTCCACTaGAAAGTAGGGCTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRQLNFLSRNTCTQRRCFRFH*KVGLSL Trigger: CAGGGACAGCCCTACTTTTCAGTGGAATCGGAAACA...TCTCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR TCA 90 bp | ACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTTGGAAATTGCTCTTGTCAGCTGGAGGCTTCCACCTTaGGGGTGTACACCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQRRGQLYPKRLEIALVSWRLPP*GCTPSS Trigger: AGAAGAAGGTGTACACCCTCAAGGTGGAAGCCTCCA...GCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR TCA 90 bp | CACTATTCGGGATATCCCATCACAAACAGGAAACCATTCAGGAAATACAAAGGGTATCTGCCAGCTTTTTaGACCGAGGGCCCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HYSGYPITNRKPFRKYKGYLPAF*TEGPSH Trigger: GTGACTGGGGCCCTCGGTTCAAAAAGCTGGCAGATA...CCCTTTGTATTTCCTGAATGGTTTCCTGTTTGTGATGGGATATCCCGAATAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | AATTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAATCACTGTGATGTTGTaGCACAGCAGGGTTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NYLADNSTSFQGTLALRGITVML*HSRVSR Trigger: CCGGGAAACCCTGCTGTGGCACAACATCACAGTGAT...TCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | TTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAGATCAGTCGCCGTGACTTaGACCACAAATGTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LPGRQLNFLSRNTCTQRRSVAVT*TTNVPT Trigger: TGTTGGCACATTTGTGGTCCAAGTCACGGCGACTGA...TCTCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | TTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAGAACTGTTCCCATATGTTaGGTCGTCAGCATCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGRQLNFLSRNTCTQRRTVPIC*VVSISR Trigger: GCGACTGATGCTGACGACCCAACATATGGGAACAGT...TCTCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | ACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTTGGAAATTGCTCTTGTCAGCTTTGATCCTGCCAATTaGCGTTCCCGGTGGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQRRGQLYPKRLEIALVSFDPAN*RSRWRG Trigger: TCCTCTCCACCGGGAACGCCAATTGGCAGGATCAAA...GCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | ACAGTACTTTGGAAATTTCTGATGACTGCACACTATGAGAATCTAATGGGGAGAATGAGGGCCTCGGCGTaGCAGGACTGCATGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLWKFLMTAHYENLMGRMRASA*QDCMFP Trigger: TGGGAACATGCAGTCCTGCCACGCCGAGGCCCTCAT...TCTCCCCATTAGATTCTCATAGTGTGCAGTCATCAGAAATTTCCAAAGTACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | ACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTTGGAAATTGCTCTTGTCAGCCTTGGACCACAAATGTaGCAACATCAGCCATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TQRRGQLYPKRLEIALVSLGPQM*QHQPSP Trigger: CGGAGATGGCTGATGTTGGCACATTTGTGGTCCAAG...GCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | TTGAACCTGCCAGAAGGATTAACTGGGTTCAGTTGGGTCCCCTGGATAATAACTCAGGCAGGAGATAGGTaGTCATCTCGTGTCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNLPEGLTGFSWVPWIITQAGDR*SSRVCY Trigger: ATAACAGACACGAGATGAGCACCTATCTCCTGCCTG...AGTTATTATCCAGGGGACCCAACTGAACCCAGTTAATCCTTCTGGCAGGTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | ACAGTACTTTGGAAATTTCTGATGACTGCACACTATGAGAATCTAATGGGGAGACCCATGGTGGTCACATaGACAGACCCGGACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVLWKFLMTAHYENLMGRPMVVT*TDPDSH Trigger: GTGACTGTCCGGGTCTGTGCATGTGACCACCATGGG...TCTCCCCATTAGATTCTCATAGTGTGCAGTCATCAGAAATTTCCAAAGTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | ACAGTACTTTGGAAATTTCTGATGACTGCACACTATGAGAATCTAATGGGGAGATCGGCGTGGCAGGACTaGATGTTCCCATGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLWKFLMTAHYENLMGRSAWQD*MFPWWS Trigger: TGACCACCATGGGAACATGCAGTCCTGCCACGCCGA...TCTCCCCATTAGATTCTCATAGTGTGCAGTCATCAGAAATTTCCAAAGTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | GTAGATCAAGATACAGATAATATGAAAAGTGGGCTGAAAACTGTGTTCTCCCCCCCATCTCCGGGACTGTaGCTGTGTAAACGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VDQDTDNMKSGLKTVFSPPSPGL*LCKRPW Trigger: CCAAGGACGTTTACACAGCCACAGTCCCGGAGATGG...GGGGGAGAACACAGTTTTCAGCCCACTTTTCATATTATCTGTATCTTGATCTAC 47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CCA 90 bp | AATTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAGGCTTTCCTCTTTGCTaGGAAGCCACTAGTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NYLADNSTSFQGTLALRGGFPLC*EATSPF Trigger: AAAAGGACTAGTGGCTTCCCAGCAAAGAGGAAAGCC...TCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CCA 90 bp | CACTATTCGGGATATCCCATCACAAACAGGAAACCATTCAGGAAATACAAAGGGGTTATGATCCCTTCCTaGGTTTCCTGGTCGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HYSGYPITNRKPFRKYKGVMIPS*VSWSVM Trigger: CATCACCGACCAGGAAACCCAGGAAGGGATCATAAC...CCCTTTGTATTTCCTGAATGGTTTCCTGTTTGTGATGGGATATCCCGAATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTTGGAAATTGCTCTTGTCAGCAGTGCTGCTTTGGACTaGGTAGTCGTTGTCCGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TQRRGQLYPKRLEIALVSSAALD*VVVVRN Trigger: ATTTCGGACAACGACTACCCAGTCCAAAGCAGCACT...GCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CCA 90 bp | GTAGATCAAGATACAGATAATATGAAAAGTGGGCTGAAAACTGTGTTCTCCCCCGACTGCATGTTCCCATaGTGGTCACATGCACAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VDQDTDNMKSGLKTVFSPDCMFP*WSHAQT Trigger: GGTCTGTGCATGTGACCACCATGGGAACATGCAGTC...GGGGGAGAACACAGTTTTCAGCCCACTTTTCATATTATCTGTATCTTGATCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CCA 90 bp | TCAACAAAGCAAATGCTAAAGTTGGACCCCTCCTGCTCTCTTGTCATTCTCATTGTAAGGAGGGGCTGTTaGGTCCGTGTCATTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: STKQMLKLDPSCSLVILIVRRGC*VRVIFL Trigger: AAGGAAAATGACACGGACCCAACAGCCCCTCCTTAC...AATGAGAATGACAAGAGAGCAGGAGGGGTCCAACTTTAGCATTTGCTTTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CAA 72 bp | ACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTaGCACTCAGAGGAGAGGTCAACTTTATCCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TWQTTQLPFKEH*HSEERSTLSQK Trigger: CTTTTGGGATAAAGTTGACCTCTCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR TCA 90 bp | TCAACAAAGCAAATGCTAAAGTTGGACCCCTCCTGCTCTCTTGTCATTCTCATTTCCAGGAGGAAGAACTaGTTCCACATCCAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: STKQMLKLDPSCSLVILISRRKN*FHIQLL Trigger: AAGGAGTTGGATGTGGAATCAGTTCTTCCTCCTGGA...AATGAGAATGACAAGAGAGCAGGAGGGGTCCAACTTTAGCATTTGCTTTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR TCA 90 bp | ACAGTACTTTGGAAATTTCTGATGACTGCACACTATGAGAATCTAATGGGGAGATGTAGGCCAGTTTGCTaGAGACAGGAGGTTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLWKFLMTAHYENLMGRCRPVC*RQEVRP Trigger: TGGACGAACCTCCTGTCTTCAGCAAACTGGCCTACA...TCTCCCCATTAGATTCTCATAGTGTGCAGTCATCAGAAATTTCCAAAGTACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | TACTTTATCATCATTTCAAAGACAAGGATGGTAGTGTTGCTACCGAAGCCAGTTTCACTGTCCCAGTGCTaGTTTGGACTGGGTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: YFIIISKTRMVVLLPKPVSLSQC*FGLGSR Trigger: ACGACTACCCAGTCCAAAGCAGCACTGGGACAGTGA...AACTGGCTTCGGTAGCAACACTACCATCCTTGTCTTTGAAATGATGATAAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR GCA 90 bp | GTAGATCAAGATACAGATAATATGAAAAGTGGGCTGAAAACTGTGTTCTCCCCCCTAGTAGGATCACGATaGACAGAAGGATGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VDQDTDNMKSGLKTVFSPLVGSR*TEGWPP Trigger: TGGTGGCCATCCTTCTGTGCATCGTGATCCTACTAG...GGGGGAGAACACAGTTTTCAGCCCACTTTTCATATTATCTGTATCTTGATCTAC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR TCA 90 bp | TTGAACCTGCCAGAAGGATTAACTGGGTTCAGTTGGGTCCCCTGGATAATAACTCCGGTCGAGAAGTTTTaGTGTAAAAATCGAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: LNLPEGLTGFSWVPWIITPVEKF*CKNRTI Trigger: AATGGTTCGATTTTTACATCAAAACTTCTCGACCGG...AGTTATTATCCAGGGGACCCAACTGAACCCAGTTAATCCTTCTGGCAGGTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR TCA 90 bp | CACTATTCGGGATATCCCATCACAAACAGGAAACCATTCAGGAAATACAAAGGGTTGTATAGTAAAGTTTaGGCTGCTGGCTGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HYSGYPITNRKPFRKYKGLYSKV*AAGCFW Trigger: CCAGAAGCAGCCAGCAGCTCAAACTTTACTATACAA...CCCTTTGTATTTCCTGAATGGTTTCCTGTTTGTGATGGGATATCCCGAATAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | TACTTTATCATCATTTCAAAGACAAGGATGGTAGTGTTGCTACCGAAGCCAGTTCTCATTCCTGCTGTTTaGAGAGAGCTCCAGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFIIISKTRMVVLLPKPVLIPAV*RELQGF Trigger: AAAGCCCTGGAGCTCTCTGCAAACAGCAGGAATGAG...AACTGGCTTCGGTAGCAACACTACCATCCTTGTCTTTGAAATGATGATAAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR GCA 90 bp | GTAGATCAAGATACAGATAATATGAAAAGTGGGCTGAAAACTGTGTTCTCCCCCCCCTCCATACATATCTaGCAGCTTTTTGAACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VDQDTDNMKSGLKTVFSPPSIHI*QLFEPR Trigger: CCTCGGTTCAAAAAGCTGGCAGATATGTATGGAGGG...GGGGGAGAACACAGTTTTCAGCCCACTTTTCATATTATCTGTATCTTGATCTAC 43% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR CAA 72 bp | TACTTTATCATCATTTCAAAGACAAGGATGGTAGTGTaGCTACCGAAGCCAGTTGGGAAAGCATGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFIIISKTRMVV*LPKPVGKAWLC Trigger: ACACAGCCATGCTTTCCCAACTGGCTTCGGTAGCAACACTACCATCCTTGTCTTTGAAATGATGATAAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR CAA 72 bp | TGCACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTaGGAAATTGCTCTTGTCAGCCCTTGGAAATTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CTQRRGQLYPKR*EIALVSPWKFN Trigger: GTTAAATTTCCAAGGGCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR TCA 90 bp | AATTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGATGTCCTCTTTGGAAATaGTCAAAGGCTCTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NYLADNSTSFQGTLALRGCPLWK*SKALSF Trigger: GAAAGAAAGAGCCTTTGATCATTTCCAAAGAGGACA...TCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| 3UTR CAA 72 bp | AGAGGAGAGGTCAACTTTATCCCAAAAGGTTGGAAATaGCTCTTGTCAGCCCTTGGAAATTTAACACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGEVNFIPKGWK*LLSALGNLTPN Trigger: GTTTGGTGTTAAATTTCCAAGGGCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CAA 72 bp | GTCTGTGAGCCGATGTATTTGCTTCCTAACAGGGTATaGCTCTTTGCATTAAATATTGTCAGGGTCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCEPMYLLPNRV*LFALNIVRVWY Trigger: ATACCAGACCCTGACAATATTTAATGCAAAGAGCAATACCCTGTTAGGAAGCAAATACATCGGCTCACAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR TCA 90 bp | AATTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAAAGGATATATTTAAGTaGTCCATCTCCTCTATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NYLADNSTSFQGTLALRGKDIFK*SISSIL Trigger: CAGGATAGAGGAGATGGATCACTTAAATATATCCTT...TCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR TCA 90 bp | TCAACAAAGCAAATGCTAAAGTTGGACCCCTCCTGCTCTCTTGTCATTCTCATTTGTAAACGTCCTTGGTaGATATTGGCTCATTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STKQMLKLDPSCSLVILICKRPW*ILAHCH Trigger: ATGACAATGAGCCAATATTCACCAAGGACGTTTACA...AATGAGAATGACAAGAGAGCAGGAGGGGTCCAACTTTAGCATTTGCTTTGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CAA 72 bp | ACATCCTTACAAACCGCTCCAAAGTTAATTATCTCCTaGAGAGCTGATAGACCAGGAACAATTTCCCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: TSLQTAPKLIIS*RADRPGTISQL Trigger: CAATTGGGAAATTGTTCCTGGTCTATCAGCTCTCAAGGAGATAATTAACTTTGGAGCGGTTTGTAAGGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| 3UTR CAA 72 bp | GGAGAGTCATTAGAACGGTCATATGAAATAAATGATTaGAACCTGCCAGAAGGATTAACTGGGTTCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GESLERSYEIND*NLPEGLTGFSW Trigger: CCAACTGAACCCAGTTAATCCTTCTGGCAGGTTCAAATCATTTATTTCATATGACCGTTCTAATGACTCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTTGGAAATTGCTCTTGTCAGCCCTTGGAAATTTAACACCAAACTTCACATTCCAGAATCAATGTTaGATATCCTGTCCATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGWKLLLSALGNLTPNFTFQNQC*ISCPYL Trigger: CAGATATGGACAGGATATTCAACATTGATTCTGGAA...TGTGAAGTTTGGTGTTAAATTTCCAAGGGCTGACAAGAGCAATTTCCAACCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CCA 90 bp | AGAGCCCCTGTGCTCAGCCCTGTGGGGTGGATGAGGGCCTCGGCGTaGCAGGACTGCATGTTCCCATGGTGGTCACATGCACAGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RAPVLSPVGWMRASA*QDCMFPWWSHAQTR Trigger: CCGGGTCTGTGCATGTGACCACCATGGGAACATGCAGTCCTGCCACGCCGAGGCCCTCATCCACCCCACAGGGCTGAGCACAGGGGCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 90 bp | GTGCTCAGCCCTGTGGGGTGGATGAGGGCCTCGGCGTGGCAGGACTaGATGTTCCCATGGTGGTCACATGCACAGACCCGGACAGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VLSPVGWMRASAWQD*MFPWWSHAQTRTVT Trigger: AGTGACTGTCCGGGTCTGTGCATGTGACCACCATGGGAACATGCAGTCCTGCCACGCCGAGGCCCTCATCCACCCCACAGGGCTGAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CCA 90 bp | GTGGGGTGGATGAGGGCCTCGGCGTGGCAGGACTGCATGTTCCCATaGTGGTCACATGCACAGACCCGGACAGTCACTGTCCCAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGWMRASAWQDCMFP*WSHAQTRTVTVPVL Trigger: CAGCACTGGGACAGTGACTGTCCGGGTCTGTGCATGTGACCACCATGGGAACATGCAGTCCTGCCACGCCGAGGCCCTCATCCACCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS TCA 90 bp | GTTCGTCCACATCGTCCACCACGATTCTCACCGTGGCCGAGTCTTTaGAGGGACCCAGGTAGAGAAATCGGGGTTCGACGTGGGGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRPHRPPRFSPWPSL*RDPGREIGVRRGDW Trigger: CCAATCCCCACGTCGAACCCCGATTTCTCTACCTGGGTCCCTTCAAAGACTCGGCCACGGTGAGAATCGTGGTGGACGATGTGGACGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS TCA 90 bp | TGTACTCGATCTCCGCATTTTCTCCCACATCGGCATCACTGGCTTTaGTCCTGCCAATTGGCGTTCCCGGTGGAGAGGACTCGGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CTRSPHFLPHRHHWL*SCQLAFPVERTRGS Trigger: AGACCCCCGAGTCCTCTCCACCGGGAACGCCAATTGGCAGGATCAAAGCCAGTGATGCCGATGTGGGAGAAAATGCGGAGATCGAGTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CCA 90 bp | CACATCGGCATCACTGGCTTTGATCCTGCCAATTGGCGTTCCCGGTaGAGAGGACTCGGGGGTCTTAAACTGGTAGGTACTCTGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HIGITGFDPANWRSR*RGLGGLKLVGTLGE Trigger: TTCCCCCAGAGTACCTACCAGTTTAAGACCCCCGAGTCCTCTCCACCGGGAACGCCAATTGGCAGGATCAAAGCCAGTGATGCCGATGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CCA 90 bp | CGCATTTTCTCCCACATCGGCATCACTGGCTTTGATCCTGCCAATTaGCGTTCCCGGTGGAGAGGACTCGGGGGTCTTAAACTGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RIFSHIGITGFDPAN*RSRWRGLGGLKLVG Trigger: ACCTACCAGTTTAAGACCCCCGAGTCCTCTCCACCGGGAACGCCAATTGGCAGGATCAAAGCCAGTGATGCCGATGTGGGAGAAAATGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CCA 90 bp | CAGGATTCCTGGCAGCGTCAGGATCCTGAGCTGCGACAGAGCCTATaGTCGTATTTATCCGGGCATCCTCCCGTATCTGTAGGATGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QDSWQRQDPELRQSL*SYLSGHPPVSVGCR Trigger: CCTACATCCTACAGATACGGGAGGATGCCCGGATAAATACGACCATAGGCTCTGTCGCAGCTCAGGATCCTGACGCTGCCAGGAATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | GGGATGTGGCCGACCGGCTCTAAGGGGACAAGGGCCGTTCCTACCTCTCCTCCCAAATCCAAGAGCTTTTaGACAGTTATGATCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GMWPTGSKGTRAVPTSPPKSKSF*TVMIPS Trigger: GGAAGGGATCATAACTGTCAAAAAGCTCTTGGATTT...GGGAGGAGAGGTAGGAACGGCCCTTGTCCCCTTAGAGCCGGTCGGCCACATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS TCA 90 bp | TTATCCGGGCATCCTCCCGTATCTGTAGGATGTAGGCCAGTTTGCTaGAGACAGGAGGTTCGTCCACATCGTCCACCACGATTCTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: LSGHPPVSVGCRPVC*RQEVRPHRPPRFSP Trigger: CGGTGAGAATCGTGGTGGACGATGTGGACGAACCTCCTGTCTTCAGCAAACTGGCCTACATCCTACAGATACGGGAGGATGCCCGGATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS TCA 90 bp | CTATCCACAGAATACTTGACAGGATTCCTGGCAGCGTCAGGATCCTaGGCTGCGACAGAGCCTATGGTCGTATTTATCCGGGCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSTEYLTGFLAASGS*AATEPMVVFIRASS Trigger: GGAGGATGCCCGGATAAATACGACCATAGGCTCTGTCGCAGCTCAGGATCCTGACGCTGCCAGGAATCCTGTCAAGTATTCTGTGGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 90 bp | CCACATCCAACTCCTTTTCGAACGGCTCAGCTCATTCCTGCTGTTTaGAGAGAGCTCCAGGGCTTTCCTCTTTGCTGGGAAGCCACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PHPTPFRTAQLIPAV*RELQGFPLCWEATS Trigger: ACTAGTGGCTTCCCAGCAAAGAGGAAAGCCCTGGAGCTCTCTGCAAACAGCAGGAATGAGCTGAGCCGTTCGAAAAGGAGTTGGATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 90 bp | CACAGAATACTTGACAGGATTCCTGGCAGCGTCAGGATCCTGAGCTaGGACAGAGCCTATGGTCGTATTTATCCGGGCATCCTCCCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HRILDRIPGSVRILS*DRAYGRIYPGILPY Trigger: ATACGGGAGGATGCCCGGATAAATACGACCATAGGCTCTGTCGCAGCTCAGGATCCTGACGCTGCCAGGAATCCTGTCAAGTATTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 90 bp | ACTGATTCCACATCCAACTCCTTTTCGAACGGCTCAGCTCATTCCTaGTGTTTGCAGAGAGCTCCAGGGCTTTCCTCTTTGCTGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TDSTSNSFSNGSAHS*CLQRAPGLSSLLGS Trigger: GCTTCCCAGCAAAGAGGAAAGCCCTGGAGCTCTCTGCAAACAGCAGGAATGAGCTGAGCCGTTCGAAAAGGAGTTGGATGTGGAATCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | TTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAGACGTAAGGAGGGGCTGTaGGGTCCGTGTCATTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGRQLNFLSRNTCTQRRRKEGL*GPCHFP Trigger: AGGAAAATGACACGGACCCAACAGCCCCTCCTTACG...TCTCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCATGGGTTTGAGAAAGTaGGGTAGGGCTGGCCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SFSKHRKLCHVIRKATASMGLRK*GRAGRP Trigger: GGGTCGGCCAGCCCTACCCAACTTTCTCAAACCCAT...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | GTAGATCAAGATACAGATAATATGAAAAGTGGGCTGAAAACTGTGTTCTCCCCCGGTTCGACGTGGGGATaGGAGGCTTCCACCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VDQDTDNMKSGLKTVFSPGSTWG*EASTLR Trigger: CCTCAAGGTGGAAGCCTCCAATCCCCACGTCGAACC...GGGGGAGAACACAGTTTTCAGCCCACTTTTCATATTATCTGTATCTTGATCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CAA 90 bp | ACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTTGGAAATTGCTCTTGTCAGCGCGATCACTGTGATGTaGTGCCACAGCAGGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQRRGQLYPKRLEIALVSAITVM*CHSRVS Trigger: GGAAACCCTGCTGTGGCACAACATCACAGTGATCGC...GCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CAA 90 bp | TTGAACCTGCCAGAAGGATTAACTGGGTTCAGTTGGGTCCCCTGGATAATAACTATATCTGCCAGCTTTTaGAACCGAGGGCCCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LNLPEGLTGFSWVPWIITISASF*NRGPQS Trigger: TGACTGGGGCCCTCGGTTCAAAAAGCTGGCAGATAT...AGTTATTATCCAGGGGACCCAACTGAACCCAGTTAATCCTTCTGGCAGGTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CAA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCGCTCATTCCTGCTGTTaGCAGAGAGCTCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFSKHRKLCHVIRKATASAHSCC*QRAPGL Trigger: AAGCCCTGGAGCTCTCTGCAAACAGCAGGAATGAGC...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CAA 90 bp | AAAGGTTGGAAATTGCTCTTGTCAGCCCTTGGAAATTTAACACCAAACTTCACATCCCTGTCCAGCCTCTaGGTGGCCTGTATGTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGWKLLLSALGNLTPNFTSLSSL*VACMSP Trigger: AGGCGACATACAGGCCACCAAGAGGCTGGACAGGGA...TGTGAAGTTTGGTGTTAAATTTCCAAGGGCTGACAAGAGCAATTTCCAACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CAA 90 bp | ACTCAGAGGAGAGGTCAACTTTATCCCAAAAGGTTGGAAATTGCTCTTGTCAGCTTGGAGGCTTCCACCTaGAGGGTGTACACCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQRRGQLYPKRLEIALVSLEAST*RVYTFF Trigger: GAAGAAGGTGTACACCCTCAAGGTGGAAGCCTCCAA...GCTGACAAGAGCAATTTCCAACCTTTTGGGATAAAGTTGACCTCTCCTCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
||
| CDS-3UTR CAA 90 bp | TTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGAGACTATCCACAGAATACTaGACAGGATTCCTGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRQLNFLSRNTCTQRRLSTEY*TGFLAA Trigger: CGCTGCCAGGAATCCTGTCAAGTATTCTGTGGATAG...TCTCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | AATTGCAAACAGAACAGCACAGTGGGTTTGAAGTGTTCCTGCGTTTCTTCTGAGTCTCTGACATCCGTGTaGTCACGAGCTGTTGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: NCKQNSTVGLKCSCVSSESLTSV*SRAVGV Trigger: GACTCCAACAGCTCGTGACAACACGGATGTCAGAGA...CTCAGAAGAAACGCAGGAACACTTCAAACCCACTGTGCTGTTCTGTTTGCAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 90 bp | CTTTGCTTTGGGTTATTAATCTCCGTTGCGATCACTGTGATGTTGTaGCACAGCAGGGTTTCCCGGTCGAGAAGTTTTGATGTAAAAATC | + |
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Preference number: 5 (lower is better) Translates to: LCFGLLISVAITVML*HSRVSRSRSFDVKI Trigger: GATTTTTACATCAAAACTTCTCGACCGGGAAACCCTGCTGTGGCACAACATCACAGTGATCGCAACGGAGATTAATAACCCAAAGCAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 90 bp | TCGTTGACGTCGAGAACTTTAATATATAGAGGAACGCGGCTGCTTTaGTTTGGGTTATTAATCTCCGTTGCGATCACTGTGATGTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: SLTSRTLIYRGTRLL*FGLLISVAITVMLC Trigger: GCACAACATCACAGTGATCGCAACGGAGATTAATAACCCAAAGCAAAGCAGCCGCGTTCCTCTATATATTAAAGTTCTCGACGTCAACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | CACTATTCGGGATATCCCATCACAAACAGGAAACCATTCAGGAAATACAAAGGGCCTTCTGTTGACAGCTaGAGCTCGAAGGATGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: HYSGYPITNRKPFRKYKGPSVDS*SSKDVN Trigger: GTTTACATCCTTCGAGCTCAAGCTGTCAACAGAAGG...CCCTTTGTATTTCCTGAATGGTTTCCTGTTTGTGATGGGATATCCCGAATAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | AATTACCTGGCAGACAACTCAACTTCCTTTCAAGGAACACTTGCACTCAGAGGATTTTCTCGATCCATGTaGAGCAACGCTGTCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: NYLADNSTSFQGTLALRGFSRSM*SNAVLM Trigger: CATCAAGACAGCGTTGCTCAACATGGATCGAGAAAA...TCCTCTGAGTGCAAGTGTTCCTTGAAAGGAAGTTGAGTTGTCTGCCAGGTAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | ACAGTACTTTGGAAATTTCTGATGACTGCACACTATGAGAATCTAATGGGGAGATCGGCATCACTGGCTTaGATCCTGCCAATTGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: TVLWKFLMTAHYENLMGRSASLA*ILPIGV Trigger: AACGCCAATTGGCAGGATCAAAGCCAGTGATGCCGA...TCTCCCCATTAGATTCTCATAGTGTGCAGTCATCAGAAATTTCCAAAGTACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCCAAGGAGAAGGAAAATaGGTGTCCGCTGTAAGGATC | + |
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Preference number: 5 (lower is better) Translates to: SFSKHRKLCHVIRKATASQGEGK*VSAVRI Trigger: GATCCTTACAGCGGACACCAATTTTCCTTCTCCTTG...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | TACTTTATCATCATTTCAAAGACAAGGATGGTAGTGTTGCTACCGAAGCCAGTTTCGCCTGTGTTCTCATaGATAATGAAGAGATCGCCC | + |
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Preference number: 5 (lower is better) Translates to: YFIIISKTRMVVLLPKPVSPVFS*IMKRSP Trigger: GGGCGATCTCTTCATTATCAATGAGAACACAGGCGA...AACTGGCTTCGGTAGCAACACTACCATCCTTGTCTTTGAAATGATGATAAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | TCATTCTCCAAACACAGAAAACTTTGCCACGTAATACGTAAGGCTACAGCAAGCCAAATAGTCATAATCTaGATCTCCATCCGTGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: SFSKHRKLCHVIRKATASQIVII*ISIRGH Trigger: GTGACCACGGATGGAGATCAAGATTATGACTATTTG...GCTTGCTGTAGCCTTACGTATTACGTGGCAAAGTTTTCTGTGTTTGGAGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | ACAGTACTTTGGAAATTTCTGATGACTGCACACTATGAGAATCTAATGGGGAGAGTGAATATTGGCTCATaGTCATTGATGTCGTGGATC | + |
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Preference number: 5 (lower is better) Translates to: TVLWKFLMTAHYENLMGRVNIGS*SLMSWI Trigger: GATCCACGACATCAATGACAATGAGCCAATATTCAC...TCTCCCCATTAGATTCTCATAGTGTGCAGTCATCAGAAATTTCCAAAGTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTTGGAAATTGCTCTTGTCAGCCCTTGGAAATTTAACACCAAACTTCACATCAGCTGATCTGCCTTaGCTTTTTCACAGACAAAAG | + |
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Preference number: 5 (lower is better) Translates to: KGWKLLLSALGNLTPNFTSADLP*LFHRQK Trigger: CTTTTGTCTGTGAAAAAGCAAAGGCAGATCAGCTGA...TGTGAAGTTTGGTGTTAAATTTCCAAGGGCTGACAAGAGCAATTTCCAACCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTTGGAAATTGCTCTTGTCAGCCCTTGGAAATTTAACACCAAACTTCACATCTCTGATGTCCTCTTaGGAAATGATCAAAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: KGWKLLLSALGNLTPNFTSLMSS*EMIKGS Trigger: AGAGCCTTTGATCATTTCCAAAGAGGACATCAGAGA...TGTGAAGTTTGGTGTTAAATTTCCAAGGGCTGACAAGAGCAATTTCCAACCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS-3UTR CAA 90 bp | TACTTTATCATCATTTCAAAGACAAGGATGGTAGTGTTGCTACCGAAGCCAGTTTTGATGTCGTGGATCTaGATGATGAATTCAGACTCA | + |
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Preference number: 5 (lower is better) Translates to: YFIIISKTRMVVLLPKPVLMSWI*MMNSDS Trigger: TGAGTCTGAATTCATCATCAAGATCCACGACATCAA...AACTGGCTTCGGTAGCAACACTACCATCCTTGTCTTTGAAATGATGATAAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 72 bp | CCTGTGGGGTGGATGAGGGCCTCGGCGTGGCAGGACTaGATGTTCCCATGGTGGTCACATGCACAGACCCGG | + |
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Preference number: 6 (lower is better) Translates to: PVGWMRASAWQD*MFPWWSHAQTR Trigger: CCGGGTCTGTGCATGTGACCACCATGGGAACATGCAGTCCTGCCACGCCGAGGCCCTCATCCACCCCACAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CCA 72 bp | GTGCTCAGCCCTGTGGGGTGGATGAGGGCCTCGGCGTaGCAGGACTGCATGTTCCCATGGTGGTCACATGCA | + |
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Preference number: 6 (lower is better) Translates to: VLSPVGWMRASA*QDCMFPWWSHA Trigger: TGCATGTGACCACCATGGGAACATGCAGTCCTGCCACGCCGAGGCCCTCATCCACCCCACAGGGCTGAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CCA 72 bp | ATGAGGGCCTCGGCGTGGCAGGACTGCATGTTCCCATaGTGGTCACATGCACAGACCCGGACAGTCACTGTC | + |
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Preference number: 6 (lower is better) Translates to: MRASAWQDCMFP*WSHAQTRTVTV Trigger: GACAGTGACTGTCCGGGTCTGTGCATGTGACCACCATGGGAACATGCAGTCCTGCCACGCCGAGGCCCTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CAA 90 bp | CTGTACTCGATCTCCGCATTTTCTCCCACATCGGCATCACTGGCTTaGATCCTGCCAATTGGCGTTCCCGGTGGAGAGGACTCGGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LYSISAFSPTSASLA*ILPIGVPGGEDSGV Trigger: GACCCCCGAGTCCTCTCCACCGGGAACGCCAATTGGCAGGATCAAAGCCAGTGATGCCGATGTGGGAGAAAATGCGGAGATCGAGTACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS TCA 72 bp | CATCGTCCACCACGATTCTCACCGTGGCCGAGTCTTTaGAGGGACCCAGGTAGAGAAATCGGGGTTCGACGT | + |
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Preference number: 6 (lower is better) Translates to: HRPPRFSPWPSL*RDPGREIGVRR Trigger: ACGTCGAACCCCGATTTCTCTACCTGGGTCCCTTCAAAGACTCGGCCACGGTGAGAATCGTGGTGGACGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 72 bp | CTGCGAACAGCACCACTGTCACTAGTAGGATCACGATaGACAGAAGGATGGCCACCAGAGCCCCTGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LRTAPLSLVGSR*TEGWPPEPLCS Trigger: TGAGCACAGGGGCTCTGGTGGCCATCCTTCTGTGCATCGTGATCCTACTAGTGACAGTGGTGCTGTTCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 72 bp | GCCGGGGTAGAAAAAGAGCTTCAGGCACAATGTCCCTaGGCGATTTGCTGTCCTCCATGGCTTCAGGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: AGVEKELQAQCP*AICCPPWLQGS Trigger: GGAACCCTGAAGCCATGGAGGACAGCAAATCGCGCAGGGACATTGTGCCTGAAGCTCTTTTTCTACCCCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CCA 72 bp | TCCCACATCGGCATCACTGGCTTTGATCCTGCCAATTaGCGTTCCCGGTGGAGAGGACTCGGGGGTCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: SHIGITGFDPAN*RSRWRGLGGLK Trigger: TTTAAGACCCCCGAGTCCTCTCCACCGGGAACGCCAATTGGCAGGATCAAAGCCAGTGATGCCGATGTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS TCA 72 bp | TCTCCGCATTTTCTCCCACATCGGCATCACTGGCTTTaGTCCTGCCAATTGGCGTTCCCGGTGGAGAGGACT | + |
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Preference number: 6 (lower is better) Translates to: SPHFLPHRHHWL*SCQLAFPVERT Trigger: AGTCCTCTCCACCGGGAACGCCAATTGGCAGGATCAAAGCCAGTGATGCCGATGTGGGAGAAAATGCGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 72 bp | CTTGACAGGATTCCTGGCAGCGTCAGGATCCTGAGCTaGGACAGAGCCTATGGTCGTATTTATCCGGGCATC | + |
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Preference number: 6 (lower is better) Translates to: LDRIPGSVRILS*DRAYGRIYPGI Trigger: GATGCCCGGATAAATACGACCATAGGCTCTGTCGCAGCTCAGGATCCTGACGCTGCCAGGAATCCTGTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CAA 72 bp | ATCTCCGCATTTTCTCCCACATCGGCATCACTGGCTTaGATCCTGCCAATTGGCGTTCCCGGTGGAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: ISAFSPTSASLA*ILPIGVPGGED Trigger: GTCCTCTCCACCGGGAACGCCAATTGGCAGGATCAAAGCCAGTGATGCCGATGTGGGAGAAAATGCGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS TCA 72 bp | CATCCTCCCGTATCTGTAGGATGTAGGCCAGTTTGCTaGAGACAGGAGGTTCGTCCACATCGTCCACCACGA | + |
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Preference number: 6 (lower is better) Translates to: HPPVSVGCRPVC*RQEVRPHRPPR Trigger: TCGTGGTGGACGATGTGGACGAACCTCCTGTCTTCAGCAAACTGGCCTACATCCTACAGATACGGGAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CCA 72 bp | ATCACTGGCTTTGATCCTGCCAATTGGCGTTCCCGGTaGAGAGGACTCGGGGGTCTTAAACTGGTAGGTACT | + |
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Preference number: 6 (lower is better) Translates to: ITGFDPANWRSR*RGLGGLKLVGT Trigger: AGTACCTACCAGTTTAAGACCCCCGAGTCCTCTCCACCGGGAACGCCAATTGGCAGGATCAAAGCCAGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS TCA 72 bp | GAATACTTGACAGGATTCCTGGCAGCGTCAGGATCCTaGGCTGCGACAGAGCCTATGGTCGTATTTATCCGG | + |
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Preference number: 6 (lower is better) Translates to: EYLTGFLAASGS*AATEPMVVFIR Trigger: CCGGATAAATACGACCATAGGCTCTGTCGCAGCTCAGGATCCTGACGCTGCCAGGAATCCTGTCAAGTATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 72 bp | ACTCCTTTTCGAACGGCTCAGCTCATTCCTGCTGTTTaGAGAGAGCTCCAGGGCTTTCCTCTTTGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TPFRTAQLIPAV*RELQGFPLCWE Trigger: TTCCCAGCAAAGAGGAAAGCCCTGGAGCTCTCTGCAAACAGCAGGAATGAGCTGAGCCGTTCGAAAAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS TCA 72 bp | CAGACTCAGGCTCGACGGGTCTCCCTGTCCTTCTGTTaGCAGCTTGAGCTCGAAGGATGTAAACAGGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: QTQARRVSLSFC*QLELEGCKQVF Trigger: AAAAACCTGTTTACATCCTTCGAGCTCAAGCTGTCAACAGAAGGACAGGGAGACCCGTCGAGCCTGAGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CCA 72 bp | AGTCACTCAAATAGTCATAATCTTGATCTCCATCCGTaGTCACGGATTCCAGCGAGCTCAGGGAGTCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SHSNSHNLDLHP*SRIPASSGSRP Trigger: TGGCCGACTCCCTGAGCTCGCTGGAATCCGTGACCACGGATGGAGATCAAGATTATGACTATTTGAGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 72 bp | AACGCGGCTGCTTTGCTTTGGGTTATTAATCTCCGTTaGGATCACTGTGATGTTGTGCCACAGCAGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: NAAALLWVINLR*DHCDVVPQQGF Trigger: GAAACCCTGCTGTGGCACAACATCACAGTGATCGCAACGGAGATTAATAACCCAAAGCAAAGCAGCCGCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS GCA 72 bp | TCGAGAACTTTAATATATAGAGGAACGCGGCTGCTTTaGTTTGGGTTATTAATCTCCGTTGCGATCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: SRTLIYRGTRLL*FGLLISVAITV Trigger: CACAGTGATCGCAACGGAGATTAATAACCCAAAGCAAAGCAGCCGCGTTCCTCTATATATTAAAGTTCTCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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| CDS CAA 72 bp | TTTGATGTAAAAATCGAACCATTTCCAGAATCAATGTaGAATATCCTGTCCATATCTGTGTGTCTATCCACA | + |
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Preference number: 6 (lower is better) Translates to: FDVKIEPFPESM*NILSISVCLST Trigger: TGTGGATAGACACACAGATATGGACAGGATATTCAACATTGATTCTGGAAATGGTTCGATTTTTACATCAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036439.6 |
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