Pregenerated sensors for CDH5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031871Ensembl transcript IDs: ENSMUST00000034339.10, ENSMUST00000209911.2
Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGCCCCTaGAAAGGGCAGGGGTCTTGCATTCTGCAAGGTGTGCCCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: LNSLQGRDAERPHCP*KGQGSCILQGVPWG Trigger: CCCCCAGGGCACACCTTGCAGAATGCAAGACCCCTGCCCTTTCCAGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 90 bp | GGCGCCCCCAAGAGATATAAGTGGACAGCAAGAGAAAAGGAAGAGTaGGTGACCAGGCGAGGCGGCTGCCTCCTGCAGGCAACCAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: GAPKRYKWTAREKEE*VTRRGGCLLQATRA Trigger: TGCTCTGGTTGCCTGCAGGAGGCAGCCGCCTCGCCTGGTCACTCACTCTTCCTTTTCTCTTGCTGTCCACTTATATCTCTTGGGGGCGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 90 bp | CGGAATGAGTCATTGCTCATCAAAGCAGTGCATGGGGCTCAGGCCTaGCGGATCACCTCAGGACCCAAGGTCAGGAGCTGCGGACAGTCT | + |
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Preference number: 1 (lower is better) Translates to: RNESLLIKAVHGAQA*RITSGPKVRSCGQS Trigger: AGACTGTCCGCAGCTCCTGACCTTGGGTCCTGAGGTGATCCGGCAGGCCTGAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 90 bp | GTCTTGCATTCTGCAAGGTGTGCCCTGGGGGTGAGGTTCATTCCCTaGGATGTGGCAACTAGGCAAAAGGCGAGTGGCGTGGTGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: VLHSARCALGVRFIP*DVATRQKASGVVAL Trigger: CAGAGCCACCACGCCACTCGCCTTTTGCCTAGTTGCCACATCTCAGGGAATGAACCTCACCCCCAGGGCACACCTTGCAGAATGCAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CCA 90 bp | TCATTCCCTGAGATGTGGCAACTAGGCAAAAGGCGAGTGGCGTGGTaGCTCTGTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SFPEMWQLGKRRVAW*LCGAVTVQPGLQRL Trigger: CAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCACAGAGCCACCACGCCACTCGCCTTTTGCCTAGTTGCCACATCTCAGGGAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 90 bp | AAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTaGCCCTGGAAAGGGCAGGGGTCTTGCATTCTGCAAGGTGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: KLLNSLQGRDAERPH*PWKGQGSCILQGVP Trigger: GGGCACACCTTGCAGAATGCAAGACCCCTGCCCTTTCCAGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 90 bp | GCTGTCACTCAGTGGAAAGTTACTCAACTCTCTCCAAGGGAGAGATaGAGAGAGGCCACACTGCCCCTGGAAAGGGCAGGGGTCTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: AVTQWKVTQLSPRER*REATLPLERAGVLH Trigger: ATGCAAGACCCCTGCCCTTTCCAGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTGAGTGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CCA 90 bp | GGATTCCACAAGGAGGGTGAGTTGAAGGCACATTTCCGCCTCGCTTaGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCTGTCACTCA | + |
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Preference number: 1 (lower is better) Translates to: GFHKEGELKAHFRLA*ASLCLYAPSSSCHS Trigger: TGAGTGACAGCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGCCTTCAACTCACCCTCCTTGTGGAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 90 bp | TGCAGAAAGGCCTTGTTGGGGGAGGATTCCACAAGGAGGGTGAGTTaGAGGCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATG | + |
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Preference number: 1 (lower is better) Translates to: CRKALLGEDSTRRVS*RHISASLGPLCVCM Trigger: CATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGCCTTCAACTCACCCTCCTTGTGGAATCCTCCCCCAACAAGGCCTTTCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CCA 90 bp | CTGTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTaGGCGCCCCCAAGAGATATAAGTGGACAGCAAGAGAAAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LWCSYGSARLAEAVS*APPRDISGQQEKRK Trigger: CTTCCTTTTCTCTTGCTGTCCACTTATATCTCTTGGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CCA 90 bp | GGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCTGTCACTCAGTaGAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GPLCVCMPLPPAVTQ*KVTQLSPRERCREA Trigger: GGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTGAGTGACAGCTGGAGGAAGGGGCATACAGACACAAAGAGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 90 bp | CATTTTCCTGAAGTTGACGGAATGAGTCATTGCTCATCAAAGCAGTaGATGGGGCTCAGGCCTGCCGGATCACCTCAGGACCCAAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: HFPEVDGMSHCSSKQ*MGLRPAGSPQDPRS Trigger: TGACCTTGGGTCCTGAGGTGATCCGGCAGGCCTGAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 90 bp | GGTGAGTGGGTTAGAGGCTATCCTTGCTCTATGACCTGTCACCTATaGCCTGTCACCTATGGTCTCCACAGTCCTCCCTGGGTGAATTCA | + |
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Preference number: 1 (lower is better) Translates to: GEWVRGYPCSMTCHL*PVTYGLHSPPWVNS Trigger: TGAATTCACCCAGGGAGGACTGTGGAGACCATAGGTGACAGGTCATAGGTGACAGGTCATAGAGCAAGGATAGCCTCTAACCCACTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 90 bp | TCTGGGATCTTTCTGGTGAGTGGGTTAGAGGCTATCCTTGCTCTATaGCCTGTCACCTATGACCTGTCACCTATGGTCTCCACAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SGIFLVSGLEAILAL*PVTYDLSPMVSTVL Trigger: GAGGACTGTGGAGACCATAGGTGACAGGTCATAGGTGACAGGTCATAGAGCAAGGATAGCCTCTAACCCACTCACCAGAAAGATCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 90 bp | CAGTTGCTTCAAATTCGACAAGCCATTTTCCTGAAGTTGACGGAATaGGTCATTGCTCATCAAAGCAGTGCATGGGGCTCAGGCCTGCCG | + |
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Preference number: 1 (lower is better) Translates to: QLLQIRQAIFLKLTE*VIAHQSSAWGSGLP Trigger: CGGCAGGCCTGAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAAATGGCTTGTCGAATTTGAAGCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 90 bp | TCAAATTCGACAAGCCATTTTCCTGAAGTTGACGGAATGAGTCATTaGTCATCAAAGCAGTGCATGGGGCTCAGGCCTGCCGGATCACCT | + |
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Preference number: 1 (lower is better) Translates to: SNSTSHFPEVDGMSH*SSKQCMGLRPAGSP Trigger: AGGTGATCCGGCAGGCCTGAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAAATGGCTTGTCGAATTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CCA 90 bp | AGGCTATCCTTGCTCTATGACCTGTCACCTATGACCTGTCACCTATaGTCTCCACAGTCCTCCCTGGGTGAATTCACAGTTGCTTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: RLSLLYDLSPMTCHL*SPQSSLGEFTVASN Trigger: ATTTGAAGCAACTGTGAATTCACCCAGGGAGGACTGTGGAGACCATAGGTGACAGGTCATAGGTGACAGGTCATAGAGCAAGGATAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CCA 90 bp | AGGAGCCCAGACAGAATACTACTCTCACTCTTCCAGTTTTTGGAGTaGCCATCAATAAGATATGTCTCTGTTCCTGGATATTTAAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: RSPDRILLSLFQFLE*PSIRYVSVPGYLRG Trigger: GCCCCTTAAATATCCAGGAACAGAGACATATCTTATTGATGGCCACTCCAAAAACTGGAAGAGTGAGAGTAGTATTCTGTCTGGGCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCCGGATCACCTCAGGACCCAAGGTCAGGAGCTGCGGACAGTCTCCTTCCGTAGGGGCTGGGCACTaGGTAGGTGTGAGGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: ACRITSGPKVRSCGQSPSVGAGH*VGVREA Trigger: AGCCTCCCTCACACCTACCCAGTGCCCAGCCCCTAC...GGAAGGAGACTGTCCGCAGCTCCTGACCTTGGGTCCTGAGGTGATCCGGCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR GCA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCCCCAAGGTCAGGAGCTaGGGACAGTCTCCTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: AHFRLAWASLCLYAPSSSPKVRS*GQSPSS Trigger: GGAGGAAGGAGACTGTCCGCAGCTCCTGACCTTGGG...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR CCA 90 bp | TGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTGGGCGCCCCCAAGACATCAAAGCAGTGCATaGGGCTCAGGCCTGCCGGAT | + |
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Preference number: 2 (lower is better) Translates to: CSYGSARLAEAVSWAPPRHQSSA*GSGLPD Trigger: ATCCGGCAGGCCTGAGCCCCATGCACTGCTTTGATG...TCTTGGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR CCA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCTTGCTACCTTGGGGATaGAAGGGGCGCTGGGTTGAA | + |
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Preference number: 2 (lower is better) Translates to: AHFRLAWASLCLYAPSSSLLPWG*KGRWVE Trigger: TTCAACCCAGCGCCCCTTCCATCCCCAAGGTAGCAA...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGGGCCTGGGTAGGGGCTaGGCACTGGGTAGGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: QWKVTQLSPRERCREATLGLGRG*ALGRCE Trigger: CTCACACCTACCCAGTGCCCAGCCCCTACCCAGGCC...CAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTGGGCGCCCCCGACGGAATGAGTCATTaGTCATCAAAGCAGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: VVQLRFSQACRGCVLGAPDGMSH*SSKQCM Trigger: CATGCACTGCTTTGATGAGCAATGACTCATTCCGTC...GGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR CCA 90 bp | CCACACTGCCCCTGGAAAGGGCAGGGGTCTTGCATTCTGCAAGGTGTGCCCTGGGATCTTTCTGGTGAGTaGGTTAGAGGCTATCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PHCPWKGQGSCILQGVPWDLSGE*VRGYPC Trigger: GCAAGGATAGCCTCTAACCCACTCACCAGAAAGATC...CCAGGGCACACCTTGCAGAATGCAAGACCCCTGCCCTTTCCAGGGGCAGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGCCCCTTGCTCATCAAAGCAGTaGATGGGGCTCAGGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: ESYSTLSKGEMQRGHTAPCSSKQ*MGLRPA Trigger: GGCAGGCCTGAGCCCCATGCACTGCTTTGATGAGCA...AGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CAA 90 bp | AAGGAGGGTGAGTTGAAGGCACATTTCCGCCTCGCTTGGGCCTCTTaGTGTCTGTATGCCCCTTCCTCCAGCTGTCACTCAGTGGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: KEGELKAHFRLAWAS*CLYAPSSSCHSVES Trigger: ACTTTCCACTGAGTGACAGCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGCCTTCAACTCACCCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGCCCCTAAAGGGCAGGGGTCTTaGATTCTGCAAGGTGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: ESYSTLSKGEMQRGHTAPKGQGS*ILQGVP Trigger: GGGCACACCTTGCAGAATGCAAGACCCCTGCCCTTT...AGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGGGGTGGGAGGAGCCCAGACAGAATACTACTCTCACTCTTCCAGTTTTTAAGGGGCCTGGAATTTaGTACCTTGGGGATGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: GWGWEEPRQNTTLTLPVFKGPGI*YLGDGR Trigger: CCTTCCATCCCCAAGGTAGCAAATTCCAGGCCCCTT...AAAAACTGGAAGAGTGAGAGTAGTATTCTGTCTGGGCTCCTCCCACCCCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR CCA 90 bp | GAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGCCCCTATGACCTGTCACCTATaGTCTCCACAGTCCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: ESYSTLSKGEMQRGHTAPMTCHL*SPQSSL Trigger: CAGGGAGGACTGTGGAGACCATAGGTGACAGGTCAT...AGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR CCA 90 bp | CACTCAGTGGAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACAAAAGGCGAGTGGCGTaGTGGCTCTGTGGTGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: HSVESYSTLSKGEMQRGHKRRVA*WLCGAV Trigger: AACTGCACCACAGAGCCACCACGCCACTCGCCTTTT...GTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGTCTGGTGTCACTCCTTaGAAATCAGGGAAGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: QWKVTQLSPRERCREATLSGVTP*KSGKTV Trigger: CACTGTCTTCCCTGATTTCCAAGGAGTGACACCAGA...CAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 72 bp | TCATTGCTCATCAAAGCAGTGCATGGGGCTCAGGCCTaGCGGATCACCTCAGGACCCAAGGTCAGGAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SLLIKAVHGAQA*RITSGPKVRSC Trigger: GCAGCTCCTGACCTTGGGTCCTGAGGTGATCCGGCAGGCCTGAGCCCCATGCACTGCTTTGATGAGCAATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 72 bp | ACTAGGCAAAAGGCGAGTGGCGTGGTGGCTCTGTGGTaGAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: TRQKASGVVALW*SYGSARLAEAV Trigger: CACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCACAGAGCCACCACGCCACTCGCCTTTTGCCTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 72 bp | CCTGGAAAGGGCAGGGGTCTTGCATTCTGCAAGGTGTaGCCTGGGGGTGAGGTTCATTCCCTGAGATGTGGC | + |
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Preference number: 3 (lower is better) Translates to: PGKGRGLAFCKV*PGGEVHSLRCG Trigger: GCCACATCTCAGGGAATGAACCTCACCCCCAGGGCACACCTTGCAGAATGCAAGACCCCTGCCCTTTCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CCA 72 bp | GAGATGTGGCAACTAGGCAAAAGGCGAGTGGCGTGGTaGCTCTGTGGTGCAGTTACGGTTCAGCCAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: EMWQLGKRRVAW*LCGAVTVQPGL Trigger: CAAGCCTGGCTGAACCGTAACTGCACCACAGAGCCACCACGCCACTCGCCTTTTGCCTAGTTGCCACATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 72 bp | GCCTTGTTGGGGGAGGATTCCACAAGGAGGGTGAGTTaGAGGCACATTTCCGCCTCGCTTGGGCCTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: ALLGEDSTRRVS*RHISASLGPLC Trigger: ACAAAGAGGCCCAAGCGAGGCGGAAATGTGCCTTCAACTCACCCTCCTTGTGGAATCCTCCCCCAACAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 72 bp | AACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTaGCCCTGGAAAGGGCAGGGGTCTTGCATTCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: NSLQGRDAERPH*PWKGQGSCILQ Trigger: TTGCAGAATGCAAGACCCCTGCCCTTTCCAGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR CAA 90 bp | GAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGCCCCTGAAAGGGCAGGGGTCTaGCATTCTGCAAGGTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: ESYSTLSKGEMQRGHTAPERAGV*HSARCA Trigger: GGCACACCTTGCAGAATGCAAGACCCCTGCCCTTTC...AGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 72 bp | CAGGGGTCTTGCATTCTGCAAGGTGTGCCCTGGGGGTaGGGTTCATTCCCTGAGATGTGGCAACTAGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: QGSCILQGVPWG*GSFPEMWQLGK Trigger: TTTGCCTAGTTGCCACATCTCAGGGAATGAACCTCACCCCCAGGGCACACCTTGCAGAATGCAAGACCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 72 bp | AATCAGGGAAGACAGTGTCCGGTGTCTGATCCAGGTTaGAATGAGGTTGGGTCCCCAGGCCCAAAGACCAGA | + |
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Preference number: 3 (lower is better) Translates to: NQGRQCPVSDPG*NEVGSPGPKTR Trigger: TCTGGTCTTTGGGCCTGGGGACCCAACCTCATTGCAACCTGGATCAGACACCGGACACTGTCTTCCCTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 72 bp | GAAGTTGACGGAATGAGTCATTGCTCATCAAAGCAGTaGATGGGGCTCAGGCCTGCCGGATCACCTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: EVDGMSHCSSKQ*MGLRPAGSPQD Trigger: GTCCTGAGGTGATCCGGCAGGCCTGAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CCA 72 bp | AGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTaGGCGCCCCCAAGAGATATAAGTGGACAGCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: SYGSARLAEAVS*APPRDISGQQE Trigger: CTCTTGCTGTCCACTTATATCTCTTGGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 72 bp | AAGAGATATAAGTGGACAGCAAGAGAAAAGGAAGAGTaGGTGACCAGGCGAGGCGGCTGCCTCCTGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KRYKWTAREKEE*VTRRGGCLLQA Trigger: TGCCTGCAGGAGGCAGCCGCCTCGCCTGGTCACTCACTCTTCCTTTTCTCTTGCTGTCCACTTATATCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 72 bp | GAATTTGCTACCTTGGGGATGGAAGGGGCGCTGGGTTaGAGAGTCTGGTGTCACTCCTTGGAAATCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: EFATLGMEGALG*RVWCHSLEIRE Trigger: TTCCCTGATTTCCAAGGAGTGACACCAGACTCTTCAACCCAGCGCCCCTTCCATCCCCAAGGTAGCAAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR TCA 72 bp | GTTAGAGGCTATCCTTGCTCTATGACCTGTCACCTATaGCCTGTCACCTATGGTCTCCACAGTCCTCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VRGYPCSMTCHL*PVTYGLHSPPW Trigger: CCAGGGAGGACTGTGGAGACCATAGGTGACAGGTCATAGGTGACAGGTCATAGAGCAAGGATAGCCTCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR GCA 72 bp | ACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATaGCCCTTCCTCCAGCTGTCACTCAGTGGAAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: TFPPRLGLFVSV*PFLQLSLSGKL Trigger: TAACTTTCCACTGAGTGACAGCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR-3UTR CAA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCTCACTCTTCCAGTTTTaGGAGTGGCCATCAATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AHFRLAWASLCLYAPSSSSLFQF*EWPSIR Trigger: TCTTATTGATGGCCACTCCAAAAACTGGAAGAGTGA...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR GCA 72 bp | ACAAGCCATTTTCCTGAAGTTGACGGAATGAGTCATTaGTCATCAAAGCAGTGCATGGGGCTCAGGCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TSHFPEVDGMSH*SSKQCMGLRPA Trigger: GGCAGGCCTGAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAAATGGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR CCA 72 bp | TGTGTCTGTATGCCCCTTCCTCCAGCTGTCACTCAGTaGAAAGTTACTCAACTCTCTCCAAGGGAGAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: CVCMPLPPAVTQ*KVTQLSPRERC Trigger: GCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTGAGTGACAGCTGGAGGAAGGGGCATACAGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAAGGCCTTGTTGGGGGAGGATTCCACAAGGAGGGTGAGTTGAAGGCACATTGGGTGAATTCACAGTaGCTTCAAATTCGACAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QKGLVGGGFHKEGELKAHWVNSQ*LQIRQA Trigger: GGCTTGTCGAATTTGAAGCAACTGTGAATTCACCCA...ATGTGCCTTCAACTCACCCTCCTTGTGGAATCCTCCCCCAACAAGGCCTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR TCA 72 bp | TTTCTGGTGAGTGGGTTAGAGGCTATCCTTGCTCTATaGCCTGTCACCTATGACCTGTCACCTATGGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FLVSGLEAILAL*PVTYDLSPMVS Trigger: GGAGACCATAGGTGACAGGTCATAGGTGACAGGTCATAGAGCAAGGATAGCCTCTAACCCACTCACCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR CCA 72 bp | TTGCTCTATGACCTGTCACCTATGACCTGTCACCTATaGTCTCCACAGTCCTCCCTGGGTGAATTCACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLYDLSPMTCHL*SPQSSLGEFTV Trigger: AACTGTGAATTCACCCAGGGAGGACTGTGGAGACCATAGGTGACAGGTCATAGGTGACAGGTCATAGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR CCA 72 bp | ATTGGACTTGATCCTTACCAGGGGCTCAGGGACCCTTaGGGAAGACTAAAAGTTCAGCATAGTCAGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: IGLDPYQGLRDP*GRLKVQHSQFA Trigger: AGCAAACTGACTATGCTGAACTTTTAGTCTTCCCCAAGGGTCCCTGAGCCCCTGGTAAGGATCAAGTCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR TCA 72 bp | CAAATTCGACAAGCCATTTTCCTGAAGTTGACGGAATaGGTCATTGCTCATCAAAGCAGTGCATGGGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QIRQAIFLKLTE*VIAHQSSAWGS Trigger: TGAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAAATGGCTTGTCGAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR CCA 72 bp | TTTGGAGTGGCCATCAATAAGATATGTCTCTGTTCCTaGATATTTAAGGGGCCTGGAATTTGCTACCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FGVAINKICLCS*IFKGPGICYLG Trigger: CCCAAGGTAGCAAATTCCAGGCCCCTTAAATATCCAGGAACAGAGACATATCTTATTGATGGCCACTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR CCA 72 bp | GACAGAATACTACTCTCACTCTTCCAGTTTTTGGAGTaGCCATCAATAAGATATGTCTCTGTTCCTGGATAT | + |
|
Preference number: 3 (lower is better) Translates to: DRILLSLFQFLE*PSIRYVSVPGY Trigger: ATATCCAGGAACAGAGACATATCTTATTGATGGCCACTCCAAAAACTGGAAGAGTGAGAGTAGTATTCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | GTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTGGGCGCCCCCTGCCATTGCTGCCACTaGCAGGAGGCCCAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVQLRFSQACRGCVLGAPCHCCH*QEAQEG Trigger: GCCTTCCTGGGCCTCCTGGCAGTGGCAGCAATGGCA...GGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR TCA 90 bp | GCCTGCCGGATCACCTCAGGACCCAAGGTCAGGAGCTGCGGACAGTCTCCTTCCGCTCAGCCAGCATCTTaGACCTGGGTCCCCAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ACRITSGPKVRSCGQSPSAQPAS*TWVPSR Trigger: ACGACTGGGGACCCAGGTTCAAGATGCTGGCTGAGC...GGAAGGAGACTGTCCGCAGCTCCTGACCTTGGGTCCTGAGGTGATCCGGCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | GCCTGCCGGATCACCTCAGGACCCAAGGTCAGGAGCTGCGGACAGTCTCCTTCCGACACCCGCCTGGGCTaGCATCTCCTCACAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ACRITSGPKVRSCGQSPSDTRLG*HLLTEG Trigger: ACCTTCTGTGAGGAGATGGCAGCCCAGGCGGGTGTC...GGAAGGAGACTGTCCGCAGCTCCTGACCTTGGGTCCTGAGGTGATCCGGCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGGCCTTGTTGGGGGAGGATTCCACAAGGAGGGTGAGTTGAAGGCACATTCCCTGGGCCCTCCGTaGAGTCCAGGCGCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QKGLVGGGFHKEGELKAHSLGPP*SPGARR Trigger: GCGCCTGGCGCCTGGACTGCACGGAGGGCCCAGGGA...ATGTGCCTTCAACTCACCCTCCTTGTGGAATCCTCCCCCAACAAGGCCTTTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGCCGGATCACCTCAGGACCCAAGGTCAGGAGCTGCGGACAGTCTCCTTTACAAGACAGTGGCGTaGCCGGCCACAGTGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPAGSPQDPRSGAADSLLYKTVA*PATVGS Trigger: TGACCCCACTGTGGCCGGCCACGCCACTGTCTTGTA...AAGGAGACTGTCCGCAGCTCCTGACCTTGGGTCCTGAGGTGATCCGGCAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR TCA 90 bp | GTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTGGGCGCCCCCTTGGTCATCCGGTTCTaGGGCTCATCTGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VVQLRFSQACRGCVLGAPLVIRF*GSSGST Trigger: TGTGGACCCAGATGAGCCTCAGAACCGGATGACCAA...GGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGCTCTGTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTGGGCACCCCGTTGTCTaGGATGAGCACGGGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VVALWCSYGSARLAEAVSGHPVV*DEHGQV Trigger: TACCTGCCCGTGCTCATCTCAGACAACGGGGTGCCC...AGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCACAGAGCCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | TGGCAACTAGGCAAAAGGCGAGTGGCGTGGTGGCTCTGTGGTGCAGTTACGGTTTGGTGGCCATCTCCCTaGGCCCTCCGTGCAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WQLGKRRVAWWLCGAVTVWWPSP*ALRAVQ Trigger: CTGGACTGCACGGAGGGCCCAGGGAGATGGCCACCA...AACCGTAACTGCACCACAGAGCCACCACGCCACTCGCCTTTTGCCTAGTTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR TCA 90 bp | GTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTGGGCGCCCCCTGTACTCGCCCTGCATaGTGCTGTACTTGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VVQLRFSQACRGCVLGAPCTRPA*CCTWSS Trigger: GGATGACCAAGTACAGCATCATGCAGGGCGAGTACA...GGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCACTCGCCCTGCTCGTTaGACTTGCACACACCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: AHFRLAWASLCLYAPSSSTRPAR*TCTHPR Trigger: CCGTGGGTGTGTGCAAGTGCAACGAGCAGGGCGAGT...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR CAA 72 bp | TGGTGGCTCTGTGGTGCAGTTACGGTTCAGCCAGGCTaGCAGAGGCTGTGTCTTGGGCGCCCCCAAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: WWLCGAVTVQPG*QRLCLGRPQEI Trigger: TATCTCTTGGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCACAGAGCCACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR TCA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCTCTCCTCACAGAAGGTaGACTCGCCCTGCTCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHFRLAWASLCLYAPSSSSPHRR*TRPARC Trigger: GCAACGAGCAGGGCGAGTTCACCTTCTGTGAGGAGA...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGGGTGGGAGGAGCCCAGACAGAATACTACTCTCACTCTTCCAGTTTTTAGGGCCTGCCATTGCTaGCACTGCCAGGAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GWGWEEPRQNTTLTLPVFRACHC*HCQEAQ Trigger: CTGGGCCTCCTGGCAGTGGCAGCAATGGCAGGCCCT...AAAAACTGGAAGAGTGAGAGTAGTATTCTGTCTGGGCTCCTCCCACCCCCACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | CCACACTGCCCCTGGAAAGGGCAGGGGTCTTGCATTCTGCAAGGTGTGCCCTGGTCCCTGTACTCGCCCTaGATGATGCTGTACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PHCPWKGQGSCILQGVPWSLYSP*MMLYLV Trigger: GACCAAGTACAGCATCATGCAGGGCGAGTACAGGGA...CCAGGGCACACCTTGCAGAATGCAAGACCCCTGCCCTTTCCAGGGGCAGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCCACAGTGGGGTCATCTaGATCCACTGCTGTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: AHFRLAWASLCLYAPSSSHSGVI*IHCCHT Trigger: CGTGTGACAGCAGTGGATGCAGATGACCCCACTGTG...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | GAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGCCCCTCGTGGCCGGCCACAGTaGGGTCATCTGCATCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ESYSTLSKGEMQRGHTAPRGRPQ*GHLHPL Trigger: CAGTGGATGCAGATGACCCCACTGTGGCCGGCCACG...AGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | CCACACTGCCCCTGGAAAGGGCAGGGGTCTTGCATTCTGCAAGGTGTGCCCTGGCTGACACATCATAGCTaGTGGTGTCCATCTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PHCPWKGQGSCILQGVPWLTHHS*WCPSHH Trigger: GTGGTGAGATGGACACCACCAGCTATGATGTGTCAG...CCAGGGCACACCTTGCAGAATGCAAGACCCCTGCCCTTTCCAGGGGCAGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR TCA 90 bp | GAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGCCCCTTTCCTCCTGGGGATCTaGGCCGTACAGCTCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESYSTLSKGEMQRGHTAPFLLGI*AVQLSQ Trigger: CTGGCTGAGCTGTACGGCTCAGATCCCCAGGAGGAA...AGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: AHFRLAWASLCLYAPSSSKVNSP*SLHLHT Trigger: TGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTT...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | GAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGCCCCTGGATGCAGAGGAAGATaGCCACCAGCGCCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ESYSTLSKGEMQRGHTAPGCRGR*PPAPGC Trigger: GCATCCAGGCGCTGGTGGCCATCTTCCTCTGCATCC...AGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCACACATCATAGCTGGTaGTGTCCATCTCACCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: AHFRLAWASLCLYAPSSSTHHSW*CPSHHR Trigger: GCGGTGGTGAGATGGACACCACCAGCTATGATGTGT...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | GAGTGGCGTGGTGGCTCTGTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTTTCCTTTCACGATTTaGTACAAGACAGTGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EWRGGSVVQLRFSQACRGFPFTI*YKTVAW Trigger: CCACGCCACTGTCTTGTACCAAATCGTGAAAGGAAA...GCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCACAGAGCCACCACGCCACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR CAA 72 bp | CAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTaGGGCGCCCCCAAGAGATATAAGTGGACAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLRFSQACRGCV*GAPKRYKWTAR Trigger: TCTTGCTGTCCACTTATATCTCTTGGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR CAA 72 bp | GAGTTGAAGGCACATTTCCGCCTCGCTTGGGCCTCTTaGTGTCTGTATGCCCCTTCCTCCAGCTGTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELKAHFRLAWAS*CLYAPSSSCHS Trigger: TGAGTGACAGCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGCCTTCAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR TCA 90 bp | TGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTGGGCGCCCCCAAGACACAGAATTAAGCACTaGCACATCATAGCTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSYGSARLAEAVSWAPPRHRIKH*HIIAGG Trigger: ACCACCAGCTATGATGTGTCAGTGCTTAATTCTGTG...TCTTGGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | CACTCAGTGGAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACTCATCACAGTGGCTGTaGCTGACTCTCCCCGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSVESYSTLSKGEMQRGHSSQWL*LTLPAD Trigger: GTCTGCGGGGAGAGTCAGGCACAGCCACTGTGATGA...GTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | CACTCAGTGGAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACCCTGCTCGTTGCACTTaGACACACCCACGGTTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HSVESYSTLSKGEMQRGHPARCT*THPRLA Trigger: CGCTAACCGTGGGTGTGTGCAAGTGCAACGAGCAGG...GTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | TGGCAACTAGGCAAAAGGCGAGTGGCGTGGTGGCTCTGTGGTGCAGTTACGGTTTCTCTCTTTTGGCGATaGTGGGCAGGTAGCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WQLGKRRVAWWLCGAVTVSLFWR*WAGSML Trigger: CAACATGCTACCTGCCCACCATCGCCAAAAGAGAGA...AACCGTAACTGCACCACAGAGCCACCACGCCACTCGCCTTTTGCCTAGTTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGGGTGGGAGGAGCCCAGACAGAATACTACTCTCACTCTTCCAGTTTTTCCTTGTCAGGGTCTTTaGCCACCACAGTGCCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GWGWEEPRQNTTLTLPVFPCQGL*PPQCRS Trigger: TGATCGGCACTGTGGTGGCCAAAGACCCTGACAAGG...AAAAACTGGAAGAGTGAGAGTAGTATTCTGTCTGGGCTCCTCCCACCCCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCGAGAATCCAGTTCGTTaGCCTCCACAGTCAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AHFRLAWASLCLYAPSSSENPVR*PPQSGY Trigger: ATAACCTGACTGTGGAGGCCAACGAACTGGATTCTC...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGAGATGCAGAGAGGCCACACTGCCCCTGGAAAGGGCAGGGGTCTTGCATTGGCGGTGTTGTCATaGTTGTTTATGAGGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGEMQRGHTAPGKGRGLALAVLS*LFMRVK Trigger: CTTCACCCTCATAAACAACCATGACAACACCGCCAA...TGCAAGACCCCTGCCCTTTCCAGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| 3UTR CAA 72 bp | GGAATTTGCTACCTTGGGGATGGAAGGGGCGCTGGGTaGAAGAGTCTGGTGTCACTCCTTGGAAATCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GICYLGDGRGAG*KSLVSLLGNQG Trigger: TCCCTGATTTCCAAGGAGTGACACCAGACTCTTCAACCCAGCGCCCCTTCCATCCCCAAGGTAGCAAATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR TCA 90 bp | TGGCAACTAGGCAAAAGGCGAGTGGCGTGGTGGCTCTGTGGTGCAGTTACGGTTGGCTTTGTTTTTGCCTaGAGTGCTGCTCAGGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: WQLGKRRVAWWLCGAVTVGFVFA*SAAQVF Trigger: GAATACCTGAGCAGCACTTCAGGCAAAAACAAAGCC...AACCGTAACTGCACCACAGAGCCACCACGCCACTCGCCTTTTGCCTAGTTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | GTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTGGGCGCCCCCTTGTCATTTATATCATaGACCTTGACAGTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVQLRFSQACRGCVLGAPLSFIS*TLTVKL Trigger: CAGCTTCACTGTCAAGGTGCATGATATAAATGACAA...GGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGAGATGCAGAGAGGCCACACTGCCCCTGGAAAGGGCAGGGGTCTTGCATGTTTTTGCCTGAAGTaGTGCTCAGGTATTCGTATC | + |
|
Preference number: 4 (lower is better) Translates to: KGEMQRGHTAPGKGRGLACFCLK*CSGIRI Trigger: GATACGAATACCTGAGCAGCACTTCAGGCAAAAACA...TGCAAGACCCCTGCCCTTTCCAGGGGCAGTGTGGCCTCTCTGCATCTCTCCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCCCAGCAAACTCTCCTTaGAGCACATACTTAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: AHFRLAWASLCLYAPSSSPANSP*STYLAF Trigger: GAATGCTAAGTATGTGCTCCAAGGAGAGTTTGCTGG...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGGGTGGGAGGAGCCCAGACAGAATACTACTCTCACTCTTCCAGTTTTTATTGGCCTCTGTCACTaGTCTTGCGGATGGAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: GWGWEEPRQNTTLTLPVFIGLCH*SCGWST Trigger: GGTACTCCATCCGCAAGACCAGTGACAGAGGCCAAT...AAAAACTGGAAGAGTGAGAGTAGTATTCTGTCTGGGCTCCTCCCACCCCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGCTCTGTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTGAACTTTGGGTTTACTaGCACCACATCCTTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVALWCSYGSARLAEAVSELWVY*HHILVC Trigger: ACAGACAAGGATGTGGTGCCAGTAAACCCAAAGTTC...AGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCACAGAGCCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CCA 90 bp | TTTCCTGAAGTTGACGGAATGAGTCATTGCTCATCAAAGCAGTGCATGGGGCTCTCACGTCGATCATGGTaGCCATCTCCCTGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPEVDGMSHCSSKQCMGLSRRSW*PSPWAL Trigger: GAGGGCCCAGGGAGATGGCCACCATGATCGACGTGA...GAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CAA 72 bp | GCAGGCATGATGGATGAGTTACAGCCTCCCTTTAGATaGGACTTGATCCTTACCAGGGGCTCAGGGACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGMMDELQPPFR*DLILTRGSGTL Trigger: AAGGGTCCCTGAGCCCCTGGTAAGGATCAAGTCCAATCTAAAGGGAGGCTGTAACTCATCCATCATGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR GCA 90 bp | TTTCCTGAAGTTGACGGAATGAGTCATTGCTCATCAAAGCAGTGCATGGGGCTCGGGAAAGTTAGGGCCTaGCATTGCTGCCACTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPEVDGMSHCSSKQCMGLGKVRA*HCCHCQ Trigger: CTGGCAGTGGCAGCAATGGCAGGCCCTAACTTTCCC...GAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR GCA 90 bp | CAGTGGAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGTCTGTACTACCAGCTTaGCCTGGGCAGCATTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QWKVTQLSPRERCREATLSVLPA*PGQHSH Trigger: GTGAGAATGCTGCCCAGGGCAAGCTGGTAGTACAGA...CAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR GCA 90 bp | CAGAAAGGCCTTGTTGGGGGAGGATTCCACAAGGAGGGTGAGTTGAAGGCACATGCGTTGAATACCTGGTaGGAAAACACAGGCCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: QKGLVGGGFHKEGELKAHALNTW*ENTGQL Trigger: CAATTGGCCTGTGTTTTCGCACCAGGTATTCAACGC...ATGTGCCTTCAACTCACCCTCCTTGTGGAATCCTCCCCCAACAAGGCCTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR TCA 90 bp | TTTCCTGAAGTTGACGGAATGAGTCATTGCTCATCAAAGCAGTGCATGGGGCTCAGAGGTCCCTATAGCTaGCATCTCTGGCACAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FPEVDGMSHCSSKQCMGLRGPYS*HLWHRC Trigger: GCATCTGTGCCAGAGATGTCAGCTATAGGGACCTCT...GAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR TCA 90 bp | CAGAAAGGCCTTGTTGGGGGAGGATTCCACAAGGAGGGTGAGTTGAAGGCACATTCTTCAGGGCAAACTTaGACTTTGGGTTTACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKGLVGGGFHKEGELKAHSSGQT*TLGLLA Trigger: TGCCAGTAAACCCAAAGTTCAAGTTTGCCCTGAAGA...ATGTGCCTTCAACTCACCCTCCTTGTGGAATCCTCCCCCAACAAGGCCTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR GCA 90 bp | GTAGCGTTGAAGGGACTGGAGGTCTCGAATAGATCAGGAGTGTGTATGTGTGTAGTCATCTGCATCCACTaGTGTCACACGGATGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VALKGLEVSNRSGVCMCVVICIH*CHTDDR Trigger: TCTGTCATCCGTGTGACAGCAGTGGATGCAGATGAC...TACACACATACACACTCCTGATCTATTCGAGACCTCCAGTCCCTTCAACGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR GCA 90 bp | GGTGAATTCACAGTTGCTTCAAATTCGACAAGCCATTTTCCTGAAGTTGACGGACTCTGCGATGGACTCTaGGCCCTCGTAGCCGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GEFTVASNSTSHFPEVDGLCDGL*ALVAVD Trigger: ATCTACGGCTACGAGGGCGCAGAGTCCATCGCAGAG...TCCGTCAACTTCAGGAAAATGGCTTGTCGAATTTGAAGCAACTGTGAATTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR TCA 90 bp | ATACTACTCTCACTCTTCCAGTTTTTGGAGTGGCCATCAATAAGATATGTCTCTCCCCGTTGTCTGAGATaGGCACGGGCAGGTAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILLSLFQFLEWPSIRYVSPRCLR*ARAGSG Trigger: TCCACTACCTGCCCGTGCTCATCTCAGACAACGGGG...AGAGACATATCTTATTGATGGCCACTCCAAAAACTGGAAGAGTGAGAGTAGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR GCA 90 bp | TTTCCTGAAGTTGACGGAATGAGTCATTGCTCATCAAAGCAGTGCATGGGGCTCCCATGGCTTTGTTTTTaGCTGAAGTGCTGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPEVDGMSHCSSKQCMGLPWLCF*LKCCSG Trigger: ACCTGAGCAGCACTTCAGGCAAAAACAAAGCCATGG...GAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGAAGTTGACGGAATGAGTCATTGCTCATCAAAGCAGTGCATGGGGCTCTGCTCCCGATTAAACTaGCCATACTTGACCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FPEVDGMSHCSSKQCMGLCSRLN*PYLTVM Trigger: CATCACGGTCAAGTATGGGCAGTTTAATCGGGAGCA...GAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CCA 90 bp | CACTCAGTGGAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACTTTCTTCTGGTTTTCTaGCAGCTTGAAGTGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSVESYSTLSKGEMQRGHFLLVF*QLEVVE Trigger: TTCTACCACTTCAAGCTGCCAGAAAACCAGAAGAAA...GTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CCA 90 bp | TTTCCTGAAGTTGACGGAATGAGTCATTGCTCATCAAAGCAGTGCATGGGGCTCTGTAAACCTGCACAATaGACTCTTTCCCTACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPEVDGMSHCSSKQCMGLCKPAQ*TLSLQG Trigger: ACCCTGTAGGGAAAGAGTCCATTGTGCAGGTTTACA...GAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR TCA 90 bp | GTAGCGTTGAAGGGACTGGAGGTCTCGAATAGATCAGGAGTGTGTATGTGTGTATCATCGATGTGCATTTaGTTCCAAATCCAGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VALKGLEVSNRSGVCMCVSSMCI*FQIQSL Trigger: GAGAGACTGGATTTGGAATCAAATGCACATCGATGA...TACACACATACACACTCCTGATCTATTCGAGACCTCCAGTCCCTTCAACGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR TCA 90 bp | GGTGAATTCACAGTTGCTTCAAATTCGACAAGCCATTTTCCTGAAGTTGACGGATGGGTCCCCAGTCGTTaGGGAAGTCATAATCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GEFTVASNSTSHFPEVDGWVPSR*GSHNRC Trigger: ACATCGATTATGACTTCCTCAACGACTGGGGACCCA...TCCGTCAACTTCAGGAAAATGGCTTGTCGAATTTGAAGCAACTGTGAATTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR GCA 90 bp | ATACTACTCTCACTCTTCCAGTTTTTGGAGTGGCCATCAATAAGATATGTCTCTCGACCCCGAAGATCTTaGCAGCAAACTCTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILLSLFQFLEWPSIRYVSRPRRS*QQTLLG Trigger: TCCAAGGAGAGTTTGCTGGCAAGATCTTCGGGGTCG...AGAGACATATCTTATTGATGGCCACTCCAAAAACTGGAAGAGTGAGAGTAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR GCA 90 bp | ATACTACTCTCACTCTTCCAGTTTTTGGAGTGGCCATCAATAAGATATGTCTCTACCGCCGTCATTGTCTaGCTCTTCTTTCTTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLSLFQFLEWPSIRYVSTAVIV*LFFLHV Trigger: GACGTGAAGAAAGAAGAGGCAGACAATGACGGCGGT...AGAGACATATCTTATTGATGGCCACTCCAAAAACTGGAAGAGTGAGAGTAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| 3UTR CAA 72 bp | AGCCCAGACAGAATACTACTCTCACTCTTCCAGTTTTaGGAGTGGCCATCAATAAGATATGTCTCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPDRILLSLFQF*EWPSIRYVSVP Trigger: AGGAACAGAGACATATCTTATTGATGGCCACTCCAAAAACTGGAAGAGTGAGAGTAGTATTCTGTCTGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | GGCCCTCCGTGCAGTCCAGGCGCCAGGCGCGGCGGCTTCTGCACCTaGGTGTACACTGCCGGCCGGGCGTCCATCGTGGAGCGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPPCSPGARRGGFCT*VYTAGRASIVERRG Trigger: GCCCCTGCGCTCCACGATGGACGCCCGGCCGGCAGTGTACACGCAGGTGCAGAAGCCGCCGCGCCTGGCGCCTGGACTGCACGGAGGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | TCCCTGGGCCCTCCGTGCAGTCCAGGCGCCAGGCGCGGCGGCTTCTaGACCTGCGTGTACACTGCCGGCCGGGCGTCCATCGTGGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLGPPCSPGARRGGF*TCVYTAGRASIVER Trigger: GCGCTCCACGATGGACGCCCGGCCGGCAGTGTACACGCAGGTGCAGAAGCCGCCGCGCCTGGCGCCTGGACTGCACGGAGGGCCCAGGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | CAGTCCAGGCGCCAGGCGCGGCGGCTTCTGCACCTGCGTGTACACTaGCGGCCGGGCGTCCATCGTGGAGCGCAGGGGCTTAGTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSRRQARRLLHLRVH*RPGVHRGAQGLSGA Trigger: GGCTCCACTAAGCCCCTGCGCTCCACGATGGACGCCCGGCCGGCAGTGTACACGCAGGTGCAGAAGCCGCCGCGCCTGGCGCCTGGACTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | TCTTTCTTCACGTCGATCATGGTGGCCATCTCCCTGGGCCCTCCGTaGAGTCCAGGCGCCAGGCGCGGCGGCTTCTGCACCTGCGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SFFTSIMVAISLGPP*SPGARRGGFCTCVY Trigger: GTACACGCAGGTGCAGAAGCCGCCGCGCCTGGCGCCTGGACTGCACGGAGGGCCCAGGGAGATGGCCACCATGATCGACGTGAAGAAAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | CACCGCCGTCATTGTCTGCCTCTTCTTTCTTCACGTCGATCATGGTaGCCATCTCCCTGGGCCCTCCGTGCAGTCCAGGCGCCAGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: HRRHCLPLLSSRRSW*PSPWALRAVQAPGA Trigger: CGCGCCTGGCGCCTGGACTGCACGGAGGGCCCAGGGAGATGGCCACCATGATCGACGTGAAGAAAGAAGAGGCAGACAATGACGGCGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | GTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTGGGCGCCCCCGCCTTGTCAGGGTCTTaGGCCACCACAGTGCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: VVQLRFSQACRGCVLGAPALSGS*ATTVPI Trigger: GATCGGCACTGTGGTGGCCAAAGACCCTGACAAGGC...GGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | GAGGAAGATGGCCACCAGCGCCTGGATGCTGACACCCGCCTGGGCTaGCATCTCCTCACAGAAGGTGAACTCGCCCTGCTCGTTGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: EEDGHQRLDADTRLG*HLLTEGELALLVAL Trigger: AAGTGCAACGAGCAGGGCGAGTTCACCTTCTGTGAGGAGATGGCAGCCCAGGCGGGTGTCAGCATCCAGGCGCTGGTGGCCATCTTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | ATGCAGAGGAAGATGGCCACCAGCGCCTGGATGCTGACACCCGCCTaGGCTGCCATCTCCTCACAGAAGGTGAACTCGCCCTGCTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MQRKMATSAWMLTPA*AAISSQKVNSPCSL Trigger: CAACGAGCAGGGCGAGTTCACCTTCTGTGAGGAGATGGCAGCCCAGGCGGGTGTCAGCATCCAGGCGCTGGTGGCCATCTTCCTCTGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 90 bp | TGGCCTCTGTCACTGGTCTTGCGGATGGAGTACCCGATGCTGCGCTaGGCCTTGTCAGGGTCTTTGGCCACCACAGTGCCGATCAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: WPLSLVLRMEYPMLR*ALSGSLATTVPISG Trigger: ACCGCTGATCGGCACTGTGGTGGCCAAAGACCCTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | ACACCCGCCTGGGCTGCCATCTCCTCACAGAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACACCCACGGTTAGCGTGCTGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPAWAAISSQKVNSP*SLHLHTPTVSVLVP Trigger: TGGAACCAGCACGCTAACCGTGGGTGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGTGAGGAGATGGCAGCCCAGGCGGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 90 bp | GGAGCGCAGGGGCTTAGTGGAGCCACCGCGCACAGAATTAAGCACTaGCACATCATAGCTGGTGGTGTCCATCTCACCACCGCCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GAQGLSGATAHRIKH*HIIAGGVHLTTALL Trigger: GAGGAGGGCGGTGGTGAGATGGACACCACCAGCTATGATGTGTCAGTGCTTAATTCTGTGCGCGGTGGCTCCACTAAGCCCCTGCGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | CTCTTTTGGCGATGGTGGGCAGGTAGCATGTTGGGGGTGTCTATCTaGGGAAAGTTAGGGCCTGCCATTGCTGCCACTGCCAGGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFWRWWAGSMLGVSI*GKLGPAIAATARRP Trigger: GGGCCTCCTGGCAGTGGCAGCAATGGCAGGCCCTAACTTTCCCCAGATAGACACCCCCAACATGCTACCTGCCCACCATCGCCAAAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | GTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTGGGCGCCCCCCGAGAATCCAGTTCGTaGGCCTCCACAGTCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VVQLRFSQACRGCVLGAPRESSS*ASTVRL Trigger: TAACCTGACTGTGGAGGCCAACGAACTGGATTCTCG...GGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCAC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | GTGGTGGCTCTGTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTCCCTGCTCGTTGCACTaGCACACACCCACGGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVALWCSYGSARLAEAVSPCSLH*HTPTVS Trigger: GCTAACCGTGGGTGTGTGCAAGTGCAACGAGCAGGG...AGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCACAGAGCCACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | TTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCTGTCACAGCTCAGCCAGCATCTaGAACCTGGGTCCCCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FRLAWASLCLYAPSSSCHSSASI*NLGPQS Trigger: CGACTGGGGACCCAGGTTCAAGATGCTGGCTGAGCT...GTGACAGCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | GGAAGAATTGGCCTCTGTCACTGGTCTTGCGGATGGAGTACCCGATaGTGCGCTGAGCCTTGTCAGGGTCTTTGGCCACCACAGTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GRIGLCHWSCGWSTR*CAEPCQGLWPPQCR Trigger: TCGGCACTGTGGTGGCCAAAGACCCTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAGGCCAATTCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | GTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTTGGGCGCCCCCACCATGGCTTTGTTTTaGCCTGAAGTGCTGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VVQLRFSQACRGCVLGAPTMALF*PEVLLR Trigger: CCTGAGCAGCACTTCAGGCAAAAACAAAGCCATGGT...GGGGGCGCCCAAGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | CAGAAAGGCCTTGTTGGGGGAGGATTCCACAAGGAGGGTGAGTTGAAGGCACATAGGCTGGGCACCCCGTaGTCTGAGATGAGCACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QKGLVGGGFHKEGELKAHRLGTP*SEMSTG Trigger: GCCCGTGCTCATCTCAGACAACGGGGTGCCCAGCCT...ATGTGCCTTCAACTCACCCTCCTTGTGGAATCCTCCCCCAACAAGGCCTTTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | AGAATTGGCCTCTGTCACTGGTCTTGCGGATGGAGTACCCGATGCTaGGCTGAGCCTTGTCAGGGTCTTTGGCCACCACAGTGCCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: RIGLCHWSCGWSTRC*AEPCQGLWPPQCRS Trigger: TGATCGGCACTGTGGTGGCCAAAGACCCTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAGGCCAATTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | GATGTCAGAGTCGGAGGAATTGGTGCTCAGGGAACTGAGGGACTCTaGGATGGACTCTGCGCCCTCGTAGCCGTAGATGTGCAGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DVRVGGIGAQGTEGL*DGLCALVAVDVQCV Trigger: GACACACTGCACATCTACGGCTACGAGGGCGCAGAGTCCATCGCAGAGTCCCTCAGTTCCCTGAGCACCAATTCCTCCGACTCTGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | TGCGGATGGAGTACCCGATGCTGCGCTGAGCCTTGTCAGGGTCTTTaGCCACCACAGTGCCGATCAGCGGTTTCTTCTGGTTTTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGWSTRCCAEPCQGL*PPQCRSAVSSGFLA Trigger: TGCCAGAAAACCAGAAGAAACCGCTGATCGGCACTGTGGTGGCCAAAGACCCTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | GCCTGCCGGATCACCTCAGGACCCAAGGTCAGGAGCTGCGGACAGTCTCCTTCCGCGGTGTTGTCATGGTaGTTTATGAGGGTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ACRITSGPKVRSCGQSPSAVLSW*FMRVKL Trigger: CAACTTCACCCTCATAAACAACCATGACAACACCGC...GGAAGGAGACTGTCCGCAGCTCCTGACCTTGGGTCCTGAGGTGATCCGGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CAA 90 bp | AGGCCTGCCGGATCACCTCAGGACCCAAGGTCAGGAGCTGCGGACAGTCTCCTTGTAAAGACGGGGAAGTaGTCATTGATGTCCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RPAGSPQDPRSGAADSLLVKTGK*SLMSSS Trigger: ACTGGAGGACATCAATGACAACTTCCCCGTCTTTAC...AAGGAGACTGTCCGCAGCTCCTGACCTTGGGTCCTGAGGTGATCCGGCAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CAA 90 bp | GAGTGGCGTGGTGGCTCTGTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCGCAAATTCCGGAGGGTaGTCATTCTCATCCAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: EWRGGSVVQLRFSQACRGANSGG*SFSSKT Trigger: AGTCTTGGATGAGAATGACAACCCTCCGGAATTTGC...GCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCACAGAGCCACCACGCCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS TCA 90 bp | TCCCTGTACTCGCCCTGCATGATGCTGTACTTGGTCATCCGGTTCTaGGGCTCATCTGGGTCCACAACAGTCAGAAAGCCCAAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLYSPCMMLYLVIRF*GSSGSTTVRKPKGL Trigger: CAAGCCCTTGGGCTTTCTGACTGTTGTGGACCCAGATGAGCCTCAGAACCGGATGACCAAGTACAGCATCATGCAGGGCGAGTACAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CCA 90 bp | GTCTTTGGCCACCACAGTGCCGATCAGCGGTTTCTTCTGGTTTTCTaGCAGCTTGAAGTGGTAGAAGTGTCGCTGGAAGACAGGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VFGHHSADQRFLLVF*QLEVVEVSLEDRGL Trigger: GAGCCCCCTGTCTTCCAGCGACACTTCTACCACTTCAAGCTGCCAGAAAACCAGAAGAAACCGCTGATCGGCACTGTGGTGGCCAAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CCA 90 bp | GCTTGGTTATTCGGAAGAATTGGCCTCTGTCACTGGTCTTGCGGATaGAGTACCCGATGCTGCGCTGAGCCTTGTCAGGGTCTTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AWLFGRIGLCHWSCG*STRCCAEPCQGLWP Trigger: TGGCCAAAGACCCTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAGGCCAATTCTTCCGAATAACCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | GTGGTGGCTCTGTGGTGCAGTTACGGTTCAGCCAGGCTTGCAGAGGCTGTGTCTACGGGGAAGTTGTCATaGATGTCCTCCAGTCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: VVALWCSYGSARLAEAVSTGKLS*MSSSLI Trigger: GATCAGACTGGAGGACATCAATGACAACTTCCCCGT...AGACACAGCCTCTGCAAGCCTGGCTGAACCGTAACTGCACCACAGAGCCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 90 bp | GTTGTCATTGATGTCCTCCAGTCTGATCATCACAGTGGCTGTGCCTaGCTCTCCCCGCAGACCCAGGGCATCTTGTGTTTCCACCACGAT | + |
|
Preference number: 5 (lower is better) Translates to: VVIDVLQSDHHSGCA*LSPQTQGILCFHHD Trigger: ATCGTGGTGGAAACACAAGATGCCCTGGGTCTGCGGGGAGAGTCAGGCACAGCCACTGTGATGATCAGACTGGAGGACATCAATGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 90 bp | CCACCACAGTGCCGATCAGCGGTTTCTTCTGGTTTTCTGGCAGCTTaGAGTGGTAGAAGTGTCGCTGGAAGACAGGGGGCTCATCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PPQCRSAVSSGFLAA*SGRSVAGRQGAHPH Trigger: ATGTGGATGAGCCCCCTGTCTTCCAGCGACACTTCTACCACTTCAAGCTGCCAGAAAACCAGAAGAAACCGCTGATCGGCACTGTGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 90 bp | CATAGCTGGTGGTGTCCATCTCACCACCGCCCTCCTCATCGTAAGTaGCCAACTGCTCGTGAATCTCCAGCGCACTCTTGCTATGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSWWCPSHHRPPHRK*PTARESPAHSCYEH Trigger: ATGCTCATAGCAAGAGTGCGCTGGAGATTCACGAGCAGTTGGTCACTTACGATGAGGAGGGCGGTGGTGAGATGGACACCACCAGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 90 bp | AGTCATAATCGATGTCAGAGTCGGAGGAATTGGTGCTCAGGGAACTaGGGGACTCTGCGATGGACTCTGCGCCCTCGTAGCCGTAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: SHNRCQSRRNWCSGN*GTLRWTLRPRSRRC Trigger: ACATCTACGGCTACGAGGGCGCAGAGTCCATCGCAGAGTCCCTCAGTTCCCTGAGCACCAATTCCTCCGACTCTGACATCGATTATGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | TTCCCTGCTTGGTTATTCGGAAGAATTGGCCTCTGTCACTGGTCTTaGGGATGGAGTACCCGATGCTGCGCTGAGCCTTGTCAGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FPAWLFGRIGLCHWS*GWSTRCCAEPCQGL Trigger: AAGACCCTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAGGCCAATTCTTCCGAATAACCAAGCAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | CCACACTGCCCCTGGAAAGGGCAGGGGTCTTGCATTCTGCAAGGTGTGCCCTGGTGTTCCAGGTTTTTGTaGGTGTTCTTGTCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: PHCPWKGQGSCILQGVPWCSRFL*VFLSTM Trigger: CATTGTGGACAAGAACACCAACAAAAACCTGGAACA...CCAGGGCACACCTTGCAGAATGCAAGACCCCTGCCCTTTCCAGGGGCAGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS-3UTR CAA 90 bp | CAGTGGAAAGTTACTCAACTCTCTCCAAGGGAGAGATGCAGAGAGGCCACACTGCCTCTGTCACTGGTCTaGCGGATGGAGTACCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: QWKVTQLSPRERCREATLPLSLV*RMEYPM Trigger: CATCGGGTACTCCATCCGCAAGACCAGTGACAGAGG...CAGTGTGGCCTCTCTGCATCTCTCCCTTGGAGAGAGTTGAGTAACTTTCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | TGGCAACTAGGCAAAAGGCGAGTGGCGTGGTGGCTCTGTGGTGCAGTTACGGTTTTAAACTGCCCATACTaGACCGTGATGTTGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WQLGKRRVAWWLCGAVTVLNCPY*TVMLAV Trigger: CACCGCCAACATCACGGTCAAGTATGGGCAGTTTAA...AACCGTAACTGCACCACAGAGCCACCACGCCACTCGCCTTTTGCCTAGTTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | GGGTGGGGGTGGGAGGAGCCCAGACAGAATACTACTCTCACTCTTCCAGTTTTTTCAGAGTCGGAGGAATaGGTGCTCAGGGAACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWGWEEPRQNTTLTLPVFSESEE*VLRELR Trigger: CCTCAGTTCCCTGAGCACCAATTCCTCCGACTCTGA...AAAAACTGGAAGAGTGAGAGTAGTATTCTGTCTGGGCTCCTCCCACCCCCACCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | CTGAAATACTCATTTCCTTTCACGATTTGGTACAAGACAGTGGCGTaGCCGGCCACAGTGGGGTCATCTGCATCCACTGCTGTCACACGG | + |
|
Preference number: 5 (lower is better) Translates to: LKYSFPFTIWYKTVA*PATVGSSASTAVTR Trigger: CCGTGTGACAGCAGTGGATGCAGATGACCCCACTGTGGCCGGCCACGCCACTGTCTTGTACCAAATCGTGAAAGGAAATGAGTATTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | AGATGTTTCCCTGCTTGGTTATTCGGAAGAATTGGCCTCTGTCACTaGTCTTGCGGATGGAGTACCCGATGCTGCGCTGAGCCTTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RCFPAWLFGRIGLCH*SCGWSTRCCAEPCQ Trigger: CTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAGGCCAATTCTTCCGAATAACCAAGCAGGGAAACATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | GCACATTTCCGCCTCGCTTGGGCCTCTTTGTGTCTGTATGCCCCTTCCTCCAGCGTTTCCACCACGATCTaGTATTCAGCCTGTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AHFRLAWASLCLYAPSSSVSTTI*YSACFS Trigger: AGAGAAACAGGCTGAATACAAGATCGTGGTGGAAAC...GCTGGAGGAAGGGGCATACAGACACAAAGAGGCCCAAGCGAGGCGGAAATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | TCTGAGGCTCATCTGGGTCCACAACAGTCAGAAAGCCCAAGGGCTTaGCCACTCGGATGTCTTCAGGCACCGAAAATGTGTATGTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SEAHLGPQQSESPRA*PLGCLQAPKMCMWI Trigger: AATCCACATACACATTTTCGGTGCCTGAAGACATCCGAGTGGGCAAGCCCTTGGGCTTTCTGACTGTTGTGGACCCAGATGAGCCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | CAATGGACTCTTTCCCTACAGGGTTACCCCGAGAATCCAGTTCGTTaGCCTCCACAGTCAGGTTATACCAGGCGTAGGTTTCTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QWTLSLQGYPENPVR*PPQSGYTRRRFLCP Trigger: TGGACAGAGAAACCTACGCCTGGTATAACCTGACTGTGGAGGCCAACGAACTGGATTCTCGGGGTAACCCTGTAGGGAAAGAGTCCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 90 bp | ATCTGCATCCACTGCTGTCACACGGATGACAGAGGTCCCTATAGCTaGCATCTCTGGCACAGATGCGTTGAATACCTGGTGCGAAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: ICIHCCHTDDRGPYS*HLWHRCVEYLVRKH Trigger: GTGTTTTCGCACCAGGTATTCAACGCATCTGTGCCAGAGATGTCAGCTATAGGGACCTCTGTCATCCGTGTGACAGCAGTGGATGCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | CCTGTGTTAGCATCGACCCCGAAGATCTTGCCAGCAAACTCTCCTTaGAGCACATACTTAGCATTCTGGCGGTTCACGTTGGACTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PVLASTPKILPANSP*STYLAFWRFTLDLI Trigger: GATCAAGTCCAACGTGAACCGCCAGAATGCTAAGTATGTGCTCCAAGGAGAGTTTGCTGGCAAGATCTTCGGGGTCGATGCTAACACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | GGCAAACTTGAACTTTGGGTTTACTGGCACCACATCCTTGTCTGTTaGAGAGATCTGTACTACCAGCTTGCCCTGGGCAGCATTCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GKLELWVYWHHILVC*RDLYYQLALGSILT Trigger: TGTGAGAATGCTGCCCAGGGCAAGCTGGTAGTACAGATCTCTGCAACAGACAAGGATGTGGTGCCAGTAAACCCAAAGTTCAAGTTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | CAGAAAGGCCTTGTTGGGGGAGGATTCCACAAGGAGGGTGAGTTGAAGGCACATGGTTGTTCCAGGTTTTaGTTGGTGTTCTTGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QKGLVGGGFHKEGELKAHGCSRF*LVFLST Trigger: TGTGGACAAGAACACCAACAAAAACCTGGAACAACC...ATGTGCCTTCAACTCACCCTCCTTGTGGAATCCTCCCCCAACAAGGCCTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | CAGAAAGGCCTTGTTGGGGGAGGATTCCACAAGGAGGGTGAGTTGAAGGCACATATTTCCTTTCACGATTaGGTACAAGACAGTGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QKGLVGGGFHKEGELKAHISFHD*VQDSGV Trigger: CACGCCACTGTCTTGTACCAAATCGTGAAAGGAAAT...ATGTGCCTTCAACTCACCCTCCTTGTGGAATCCTCCCCCAACAAGGCCTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | GTAGCGTTGAAGGGACTGGAGGTCTCGAATAGATCAGGAGTGTGTATGTGTGTACAGACCCAGGGCATCTaGTGTTTCCACCACGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: VALKGLEVSNRSGVCMCVQTQGI*CFHHDL Trigger: AAGATCGTGGTGGAAACACAAGATGCCCTGGGTCTG...TACACACATACACACTCCTGATCTATTCGAGACCTCCAGTCCCTTCAACGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | GAGGGTTGTCATTCTCATCCAAGACTTCAATGTAAACCTGCACAATaGACTCTTTCCCTACAGGGTTACCCCGAGAATCCAGTTCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGCHSHPRLQCKPAQ*TLSLQGYPENPVRW Trigger: CCAACGAACTGGATTCTCGGGGTAACCCTGTAGGGAAAGAGTCCATTGTGCAGGTTTACATTGAAGTCTTGGATGAGAATGACAACCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | GAGGTCCCTATAGCTGACATCTCTGGCACAGATGCGTTGAATACCTaGTGCGAAAACACAGGCCAATTGTCATTTATATCATGCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVPIADISGTDALNT*CENTGQLSFISCTL Trigger: CAAGGTGCATGATATAAATGACAATTGGCCTGTGTTTTCGCACCAGGTATTCAACGCATCTGTGCCAGAGATGTCAGCTATAGGGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 90 bp | AGGTTTCTCTGTCCAGTTCTTTCTCGTTATAGATGTTTCCCTGCTTaGTTATTCGGAAGAATTGGCCTCTGTCACTGGTCTTGCGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RFLCPVLSRYRCFPA*LFGRIGLCHWSCGW Trigger: CCATCCGCAAGACCAGTGACAGAGGCCAATTCTTCCGAATAACCAAGCAGGGAAACATCTATAACGAGAAAGAACTGGACAGAGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | ATACTACTCTCACTCTTCCAGTTTTTGGAGTGGCCATCAATAAGATATGTCTCTTGGGCAGGTAGCATGTaGGGGGTGTCTATCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILLSLFQFLEWPSIRYVSWAGSM*GVSIWG Trigger: TCCCCAGATAGACACCCCCAACATGCTACCTGCCCA...AGAGACATATCTTATTGATGGCCACTCCAAAAACTGGAAGAGTGAGAGTAGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | TTTCCTGAAGTTGACGGAATGAGTCATTGCTCATCAAAGCAGTGCATGGGGCTCTTCTTCAGGGCAAACTaGAACTTTGGGTTTACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPEVDGMSHCSSKQCMGLFFRAN*NFGFTG Trigger: GCCAGTAAACCCAAAGTTCAAGTTTGCCCTGAAGAA...GAGCCCCATGCACTGCTTTGATGAGCAATGACTCATTCCGTCAACTTCAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 90 bp | GTCCCTATAGCTGACATCTCTGGCACAGATGCGTTGAATACCTGGTaGGAAAACACAGGCCAATTGTCATTTATATCATGCACCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: VPIADISGTDALNTW*ENTGQLSFISCTLT Trigger: TGTCAAGGTGCATGATATAAATGACAATTGGCCTGTGTTTTCGCACCAGGTATTCAACGCATCTGTGCCAGAGATGTCAGCTATAGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS-3UTR CAA 90 bp | ATACTACTCTCACTCTTCCAGTTTTTGGAGTGGCCATCAATAAGATATGTCTCTGGTTATTCGGAAGAATaGGCCTCTGTCACTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILLSLFQFLEWPSIRYVSGYSEE*ASVTGL Trigger: AAGACCAGTGACAGAGGCCAATTCTTCCGAATAACC...AGAGACATATCTTATTGATGGCCACTCCAAAAACTGGAAGAGTGAGAGTAGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | CGCCAGGCGCGGCGGCTTCTGCACCTGCGTGTACACTaGCGGCCGGGCGTCCATCGTGGAGCGCAGGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RQARRLLHLRVH*RPGVHRGAQGL Trigger: AAGCCCCTGCGCTCCACGATGGACGCCCGGCCGGCAGTGTACACGCAGGTGCAGAAGCCGCCGCGCCTGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | CCTCCGTGCAGTCCAGGCGCCAGGCGCGGCGGCTTCTaGACCTGCGTGTACACTGCCGGCCGGGCGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: PPCSPGARRGGF*TCVYTAGRASI Trigger: GATGGACGCCCGGCCGGCAGTGTACACGCAGGTGCAGAAGCCGCCGCGCCTGGCGCCTGGACTGCACGGAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | TGCAGTCCAGGCGCCAGGCGCGGCGGCTTCTGCACCTaGGTGTACACTGCCGGCCGGGCGTCCATCGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CSPGARRGGFCT*VYTAGRASIVE Trigger: CTCCACGATGGACGCCCGGCCGGCAGTGTACACGCAGGTGCAGAAGCCGCCGCGCCTGGCGCCTGGACTGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | ACGTCGATCATGGTGGCCATCTCCCTGGGCCCTCCGTaGAGTCCAGGCGCCAGGCGCGGCGGCTTCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TSIMVAISLGPP*SPGARRGGFCT Trigger: GGTGCAGAAGCCGCCGCGCCTGGCGCCTGGACTGCACGGAGGGCCCAGGGAGATGGCCACCATGATCGACGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | GGCCACCAGCGCCTGGATGCTGACACCCGCCTGGGCTaGCATCTCCTCACAGAAGGTGAACTCGCCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GHQRLDADTRLG*HLLTEGELALL Trigger: GAGCAGGGCGAGTTCACCTTCTGTGAGGAGATGGCAGCCCAGGCGGGTGTCAGCATCCAGGCGCTGGTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 72 bp | AAGATGGCCACCAGCGCCTGGATGCTGACACCCGCCTaGGCTGCCATCTCCTCACAGAAGGTGAACTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KMATSAWMLTPA*AAISSQKVNSP Trigger: GGGCGAGTTCACCTTCTGTGAGGAGATGGCAGCCCAGGCGGGTGTCAGCATCCAGGCGCTGGTGGCCATCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | GGGGGTGTCTATCTGGGGAAAGTTAGGGCCTGCCATTaGTGCCACTGCCAGGAGGCCCAGGAAGGCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GGVYLGKVRACH*CHCQEAQEGSQ Trigger: TTGGGAGCCTTCCTGGGCCTCCTGGCAGTGGCAGCAATGGCAGGCCCTAACTTTCCCCAGATAGACACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034339.10 ENSMUST00000209911.2 |
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| CDS GCA 72 bp | CAAGACAGTGGCGTGGCCGGCCACAGTGGGGTCATCTaGATCCACTGCTGTCACACGGATGACAGAGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QDSGVAGHSGVI*IHCCHTDDRGP Trigger: GGGACCTCTGTCATCCGTGTGACAGCAGTGGATGCAGATGACCCCACTGTGGCCGGCCACGCCACTGTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | CCTGCTCGTTGCACTTGCACACACCCACGGTTAGCGTaGTGGTTCCAGTCAGGCTGGGCACCCCGTTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PARCTCTHPRLA*WFQSGWAPRCL Trigger: CAGACAACGGGGTGCCCAGCCTGACTGGAACCAGCACGCTAACCGTGGGTGTGTGCAAGTGCAACGAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 90 bp | GCTGCCATCTCCTCACAGAAGGTGAACTCGCCCTGCTCGTTGCACTaGCACACACCCACGGTTAGCGTGCTGGTTCCAGTCAGGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAISSQKVNSPCSLH*HTPTVSVLVPVRLG Trigger: GCCCAGCCTGACTGGAACCAGCACGCTAACCGTGGGTGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGTGAGGAGATGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 90 bp | GCCTGGGCTGCCATCTCCTCACAGAAGGTGAACTCGCCCTGCTCGTaGCACTTGCACACACCCACGGTTAGCGTGCTGGTTCCAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AWAAISSQKVNSPCS*HLHTPTVSVLVPVR Trigger: CCTGACTGGAACCAGCACGCTAACCGTGGGTGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGTGAGGAGATGGCAGCCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 72 bp | TCACTGGTCTTGCGGATGGAGTACCCGATGCTGCGCTaGGCCTTGTCAGGGTCTTTGGCCACCACAGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLVLRMEYPMLR*ALSGSLATTVP Trigger: CGGCACTGTGGTGGCCAAAGACCCTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 72 bp | TGGTTCCAGTCAGGCTGGGCACCCCGTTGTCTGAGATaGGCACGGGCAGGTAGTGGAACTTGGCATGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: WFQSGWAPRCLR*ARAGSGTWHAP Trigger: GGGAGCATGCCAAGTTCCACTACCTGCCCGTGCTCATCTCAGACAACGGGGTGCCCAGCCTGACTGGAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 72 bp | CGTGCTGGTTCCAGTCAGGCTGGGCACCCCGTTGTCTaGGATGAGCACGGGCAGGTAGTGGAACTTGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: RAGSSQAGHPVV*DEHGQVVELGM Trigger: CATGCCAAGTTCCACTACCTGCCCGTGCTCATCTCAGACAACGGGGTGCCCAGCCTGACTGGAACCAGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | GGTGTCTATCTGGGGAAAGTTAGGGCCTGCCATTGCTaGCACTGCCAGGAGGCCCAGGAAGGCTCCCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GVYLGKVRACHC*HCQEAQEGSQS Trigger: GCTTTGGGAGCCTTCCTGGGCCTCCTGGCAGTGGCAGCAATGGCAGGCCCTAACTTTCCCCAGATAGACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034339.10 ENSMUST00000209911.2 |
||
| CDS GCA 72 bp | GGCCTCTGTCACTGGTCTTGCGGATGGAGTACCCGATaGTGCGCTGAGCCTTGTCAGGGTCTTTGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GLCHWSCGWSTR*CAEPCQGLWPP Trigger: TGGTGGCCAAAGACCCTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS TCA 72 bp | CGATGTCAGAGTCGGAGGAATTGGTGCTCAGGGAACTaGGGGACTCTGCGATGGACTCTGCGCCCTCGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCQSRRNWCSGN*GTLRWTLRPRS Trigger: GCTACGAGGGCGCAGAGTCCATCGCAGAGTCCCTCAGTTCCCTGAGCACCAATTCCTCCGACTCTGACATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | CTCTGTCACTGGTCTTGCGGATGGAGTACCCGATGCTaGGCTGAGCCTTGTCAGGGTCTTTGGCCACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LCHWSCGWSTRC*AEPCQGLWPPQ Trigger: CTGTGGTGGCCAAAGACCCTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | TGGGCTGCCATCTCCTCACAGAAGGTGAACTCGCCCTaGTCGTTGCACTTGCACACACCCACGGTTAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: WAAISSQKVNSP*SLHLHTPTVSV Trigger: CACGCTAACCGTGGGTGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGTGAGGAGATGGCAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | GTCGGAGGAATTGGTGCTCAGGGAACTGAGGGACTCTaGGATGGACTCTGCGCCCTCGTAGCCGTAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGGIGAQGTEGL*DGLCALVAVDV Trigger: CACATCTACGGCTACGAGGGCGCAGAGTCCATCGCAGAGTCCCTCAGTTCCCTGAGCACCAATTCCTCCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 72 bp | CGATGGTGGGCAGGTAGCATGTTGGGGGTGTCTATCTaGGGAAAGTTAGGGCCTGCCATTGCTGCCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RWWAGSMLGVSI*GKLGPAIAATA Trigger: GGCAGTGGCAGCAATGGCAGGCCCTAACTTTCCCCAGATAGACACCCCCAACATGCTACCTGCCCACCATCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | TCCTCACAGAAGGTGAACTCGCCCTGCTCGTTGCACTaGCACACACCCACGGTTAGCGTGCTGGTTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSQKVNSPCSLH*HTPTVSVLVPV Trigger: GACTGGAACCAGCACGCTAACCGTGGGTGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGTGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | GCCATCTCCTCACAGAAGGTGAACTCGCCCTGCTCGTaGCACTTGCACACACCCACGGTTAGCGTGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AISSQKVNSPCS*HLHTPTVSVLV Trigger: AACCAGCACGCTAACCGTGGGTGTGTGCAAGTGCAACGAGCAGGGCGAGTTCACCTTCTGTGAGGAGATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 72 bp | GATGTCCTCCAGTCTGATCATCACAGTGGCTGTGCCTaGCTCTCCCCGCAGACCCAGGGCATCTTGTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: DVLQSDHHSGCA*LSPQTQGILCF Trigger: GAAACACAAGATGCCCTGGGTCTGCGGGGAGAGTCAGGCACAGCCACTGTGATGATCAGACTGGAGGACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 72 bp | TGGTGTCCATCTCACCACCGCCCTCCTCATCGTAAGTaGCCAACTGCTCGTGAATCTCCAGCGCACTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WCPSHHRPPHRK*PTARESPAHSC Trigger: GCAAGAGTGCGCTGGAGATTCACGAGCAGTTGGTCACTTACGATGAGGAGGGCGGTGGTGAGATGGACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | TGCGCTGAGCCTTGTCAGGGTCTTTGGCCACCACAGTaGCGATCAGCGGTTTCTTCTGGTTTTCTGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CAEPCQGLWPPQ*RSAVSSGFLAA Trigger: AGCTGCCAGAAAACCAGAAGAAACCGCTGATCGGCACTGTGGTGGCCAAAGACCCTGACAAGGCTCAGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 72 bp | TTCGGAAGAATTGGCCTCTGTCACTGGTCTTGCGGATaGAGTACCCGATGCTGCGCTGAGCCTTGTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: FGRIGLCHWSCG*STRCCAEPCQG Trigger: ACCCTGACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAGGCCAATTCTTCCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 72 bp | TCGCCCTGCATGATGCTGTACTTGGTCATCCGGTTCTaGGGCTCATCTGGGTCCACAACAGTCAGAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SPCMMLYLVIRF*GSSGSTTVRKP Trigger: GGGCTTTCTGACTGTTGTGGACCCAGATGAGCCTCAGAACCGGATGACCAAGTACAGCATCATGCAGGGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 72 bp | GGGCTTAGTGGAGCCACCGCGCACAGAATTAAGCACTaGCACATCATAGCTGGTGGTGTCCATCTCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: GLSGATAHRIKH*HIIAGGVHLTT Trigger: GGTGGTGAGATGGACACCACCAGCTATGATGTGTCAGTGCTTAATTCTGTGCGCGGTGGCTCCACTAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 72 bp | CCTGCTTGGTTATTCGGAAGAATTGGCCTCTGTCACTaGTCTTGCGGATGGAGTACCCGATGCTGCGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PAWLFGRIGLCH*SCGWSTRCCAE Trigger: CTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAGGCCAATTCTTCCGAATAACCAAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 72 bp | TGCCGATCAGCGGTTTCTTCTGGTTTTCTGGCAGCTTaGAGTGGTAGAAGTGTCGCTGGAAGACAGGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CRSAVSSGFLAA*SGRSVAGRQGA Trigger: AGCCCCCTGTCTTCCAGCGACACTTCTACCACTTCAAGCTGCCAGAAAACCAGAAGAAACCGCTGATCGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | CATCTGGGTCCACAACAGTCAGAAAGCCCAAGGGCTTaGCCACTCGGATGTCTTCAGGCACCGAAAATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HLGPQQSESPRA*PLGCLQAPKMC Trigger: ACACATTTTCGGTGCCTGAAGACATCCGAGTGGGCAAGCCCTTGGGCTTTCTGACTGTTGTGGACCCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS GCA 72 bp | TGGTTATTCGGAAGAATTGGCCTCTGTCACTGGTCTTaGGGATGGAGTACCCGATGCTGCGCTGAGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: WLFGRIGLCHWS*GWSTRCCAEPC Trigger: ACAAGGCTCAGCGCAGCATCGGGTACTCCATCCGCAAGACCAGTGACAGAGGCCAATTCTTCCGAATAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 72 bp | TCATTTCCTTTCACGATTTGGTACAAGACAGTGGCGTaGCCGGCCACAGTGGGGTCATCTGCATCCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SFPFTIWYKTVA*PATVGSSASTA Trigger: AGCAGTGGATGCAGATGACCCCACTGTGGCCGGCCACGCCACTGTCTTGTACCAAATCGTGAAAGGAAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | TCATCTGGGTCCACAACAGTCAGAAAGCCCAAGGGCTaGCCCACTCGGATGTCTTCAGGCACCGAAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSGSTTVRKPKG*PTRMSSGTENV Trigger: CACATTTTCGGTGCCTGAAGACATCCGAGTGGGCAAGCCCTTGGGCTTTCTGACTGTTGTGGACCCAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS TCA 72 bp | CACTGCTGTCACACGGATGACAGAGGTCCCTATAGCTaGCATCTCTGGCACAGATGCGTTGAATACCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HCCHTDDRGPYS*HLWHRCVEYLV Trigger: CACCAGGTATTCAACGCATCTGTGCCAGAGATGTCAGCTATAGGGACCTCTGTCATCCGTGTGACAGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 72 bp | GCATCGACCCCGAAGATCTTGCCAGCAAACTCTCCTTaGAGCACATACTTAGCATTCTGGCGGTTCACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ASTPKILPANSP*STYLAFWRFTL Trigger: CAACGTGAACCGCCAGAATGCTAAGTATGTGCTCCAAGGAGAGTTTGCTGGCAAGATCTTCGGGGTCGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 72 bp | CACCACAGTGCCGATCAGCGGTTTCTTCTGGTTTTCTaGCAGCTTGAAGTGGTAGAAGTGTCGCTGGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HHSADQRFLLVF*QLEVVEVSLED Trigger: GTCTTCCAGCGACACTTCTACCACTTCAAGCTGCCAGAAAACCAGAAGAAACCGCTGATCGGCACTGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CCA 72 bp | CTTTCCCTACAGGGTTACCCCGAGAATCCAGTTCGTTaGCCTCCACAGTCAGGTTATACCAGGCGTAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLQGYPENPVR*PPQSGYTRRRF Trigger: AAACCTACGCCTGGTATAACCTGACTGTGGAGGCCAACGAACTGGATTCTCGGGGTAACCCTGTAGGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | CGCTGGAAGACAGGGGGCTCATCCACATCTAGGACGTaGATGGTGACCATGGCTTTGTTTTTGCCTGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RWKTGGSSTSRT*MVTMALFLPEV Trigger: CACTTCAGGCAAAAACAAAGCCATGGTCACCATCAACGTCCTAGATGTGGATGAGCCCCCTGTCTTCCAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 72 bp | AATACTCATTTCCTTTCACGATTTGGTACAAGACAGTaGCGTGGCCGGCCACAGTGGGGTCATCTGCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: NTHFLSRFGTRQ*RGRPQWGHLHP Trigger: TGGATGCAGATGACCCCACTGTGGCCGGCCACGCCACTGTCTTGTACCAAATCGTGAAAGGAAATGAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | AGGGACTTCGTGGGTTTGATGATACCCTCGTTACGTTaGGGGTCTGTCTCAATGGTGAAGGTGTCCCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RDFVGLMIPSLR*GSVSMVKVSLY Trigger: GTACAGGGACACCTTCACCATTGAGACAGACCCCAAACGTAACGAGGGTATCATCAAACCCACGAAGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 90 bp | GACTCTCCCCGCAGACCCAGGGCATCTTGTGTTTCCACCACGATCTaGTATTCAGCCTGTTTCTCTCGGTCCAAGTTTTTGATCTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: DSPRRPRASCVSTTI*YSACFSRSKFLIFV Trigger: CACAAAGATCAAAAACTTGGACCGAGAGAAACAGGCTGAATACAAGATCGTGGTGGAAACACAAGATGCCCTGGGTCTGCGGGGAGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 90 bp | ACAGGGGGCTCATCCACATCTAGGACGTTGATGGTGACCATGGCTTaGTTTTTGCCTGAAGTGCTGCTCAGGTATTCGTATCGGATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TGGSSTSRTLMVTMA*FLPEVLLRYSYRIV Trigger: CACTATCCGATACGAATACCTGAGCAGCACTTCAGGCAAAAACAAAGCCATGGTCACCATCAACGTCCTAGATGTGGATGAGCCCCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 90 bp | TTCTTCAGGGCAAACTTGAACTTTGGGTTTACTGGCACCACATCCTaGTCTGTTGCAGAGATCTGTACTACCAGCTTGCCCTGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FFRANLNFGFTGTTS*SVAEICTTSLPWAA Trigger: TGCTGCCCAGGGCAAGCTGGTAGTACAGATCTCTGCAACAGACAAGGATGTGGTGCCAGTAAACCCAAAGTTCAAGTTTGCCCTGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | GAGGTCCCTATAGCTGACATCTCTGGCACAGATGCGTaGAATACCTGGTGCGAAAACACAGGCCAATTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EVPIADISGTDA*NTWCENTGQLS Trigger: TGACAATTGGCCTGTGTTTTCGCACCAGGTATTCAACGCATCTGTGCCAGAGATGTCAGCTATAGGGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | CGCAGACCCAGGGCATCTTGTGTTTCCACCACGATCTaGTATTCAGCCTGTTTCTCTCGGTCCAAGTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRPRASCVSTTI*YSACFSRSKFL Trigger: CAAAAACTTGGACCGAGAGAAACAGGCTGAATACAAGATCGTGGTGGAAACACAAGATGCCCTGGGTCTGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | ACATCCTTGTCTGTTGCAGAGATCTGTACTACCAGCTaGCCCTGGGCAGCATTCTCACACACTTTAGGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: TSLSVAEICTTS*PWAAFSHTLGS Trigger: CGAACCTAAAGTGTGTGAGAATGCTGCCCAGGGCAAGCTGGTAGTACAGATCTCTGCAACAGACAAGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 90 bp | AACTTGGCATGCTCCCGATTAAACTGCCCATACTTGACCGTGATGTaGGCGGTGTTGTCATGGTTGTTTATGAGGGTGAAGTTGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: NLACSRLNCPYLTVM*AVLSWLFMRVKLLS Trigger: GGACAGCAACTTCACCCTCATAAACAACCATGACAACACCGCCAACATCACGGTCAAGTATGGGCAGTTTAATCGGGAGCATGCCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 72 bp | GTTGCTGTCCTCGTTCTTCAGGGCAAACTTGAACTTTaGGTTTACTGGCACCACATCCTTGTCTGTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VAVLVLQGKLEL*VYWHHILVCCR Trigger: TCTGCAACAGACAAGGATGTGGTGCCAGTAAACCCAAAGTTCAAGTTTGCCCTGAAGAACGAGGACAGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | TGCTCCCGATTAAACTGCCCATACTTGACCGTGATGTaGGCGGTGTTGTCATGGTTGTTTATGAGGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSRLNCPYLTVM*AVLSWLFMRVK Trigger: CTTCACCCTCATAAACAACCATGACAACACCGCCAACATCACGGTCAAGTATGGGCAGTTTAATCGGGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | TGGAACTTGGCATGCTCCCGATTAAACTGCCCATACTaGACCGTGATGTTGGCGGTGTTGTCATGGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: WNLACSRLNCPY*TVMLAVLSWLF Trigger: AAACAACCATGACAACACCGCCAACATCACGGTCAAGTATGGGCAGTTTAATCGGGAGCATGCCAAGTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 90 bp | TCATGCACCTTGACAGTGAAGCTGGAAGGTTGTTCCAGGTTTTTGTaGGTGTTCTTGTCCACAATGAGGGCAGTAAGGAAGTACTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SCTLTVKLEGCSRFL*VFLSTMRAVRKYSE Trigger: CTCTGAGTACTTCCTTACTGCCCTCATTGTGGACAAGAACACCAACAAAAACCTGGAACAACCTTCCAGCTTCACTGTCAAGGTGCATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 90 bp | CGGATGACAGAGGTCCCTATAGCTGACATCTCTGGCACAGATGCGTaGAATACCTGGTGCGAAAACACAGGCCAATTGTCATTTATATCA | + |
|
Preference number: 6 (lower is better) Translates to: RMTEVPIADISGTDA*NTWCENTGQLSFIS Trigger: TGATATAAATGACAATTGGCCTGTGTTTTCGCACCAGGTATTCAACGCATCTGTGCCAGAGATGTCAGCTATAGGGACCTCTGTCATCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CCA 72 bp | CTCGTTCTTCAGGGCAAACTTGAACTTTGGGTTTACTaGCACCACATCCTTGTCTGTTGCAGAGATCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LVLQGKLELWVY*HHILVCCRDLY Trigger: GTACAGATCTCTGCAACAGACAAGGATGTGGTGCCAGTAAACCCAAAGTTCAAGTTTGCCCTGAAGAACGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | ACCTTGACAGTGAAGCTGGAAGGTTGTTCCAGGTTTTaGTTGGTGTTCTTGTCCACAATGAGGGCAGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TLTVKLEGCSRF*LVFLSTMRAVR Trigger: CCTTACTGCCCTCATTGTGGACAAGAACACCAACAAAAACCTGGAACAACCTTCCAGCTTCACTGTCAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | ATTATCAATGCTGAAATACTCATTTCCTTTCACGATTaGGTACAAGACAGTGGCGTGGCCGGCCACAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: IINAEILISFHD*VQDSGVAGHSG Trigger: CCCACTGTGGCCGGCCACGCCACTGTCTTGTACCAAATCGTGAAAGGAAATGAGTATTTCAGCATTGATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 72 bp | TTAAACTGCCCATACTTGACCGTGATGTTGGCGGTGTaGTCATGGTTGTTTATGAGGGTGAAGTTGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LNCPYLTVMLAV*SWLFMRVKLLS Trigger: GGACAGCAACTTCACCCTCATAAACAACCATGACAACACCGCCAACATCACGGTCAAGTATGGGCAGTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 90 bp | TTGACAGTGAAGCTGGAAGGTTGTTCCAGGTTTTTGTTGGTGTTCTaGTCCACAATGAGGGCAGTAAGGAAGTACTCAGAGACTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LTVKLEGCSRFLLVF*STMRAVRKYSETFS Trigger: GGAGAAAGTCTCTGAGTACTTCCTTACTGCCCTCATTGTGGACAAGAACACCAACAAAAACCTGGAACAACCTTCCAGCTTCACTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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| CDS CAA 90 bp | TCTGGCACAGATGCGTTGAATACCTGGTGCGAAAACACAGGCCAATaGTCATTTATATCATGCACCTTGACAGTGAAGCTGGAAGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SGTDALNTWCENTGQ*SFISCTLTVKLEGC Trigger: ACAACCTTCCAGCTTCACTGTCAAGGTGCATGATATAAATGACAATTGGCCTGTGTTTTCGCACCAGGTATTCAACGCATCTGTGCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CCA 72 bp | CATTCTCATCCAAGACTTCAATGTAAACCTGCACAATaGACTCTTTCCCTACAGGGTTACCCCGAGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: HSHPRLQCKPAQ*TLSLQGYPENP Trigger: TGGATTCTCGGGGTAACCCTGTAGGGAAAGAGTCCATTGTGCAGGTTTACATTGAAGTCTTGGATGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CAA 72 bp | AAGCTGGAAGGTTGTTCCAGGTTTTTGTTGGTGTTCTaGTCCACAATGAGGGCAGTAAGGAAGTACTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KLEGCSRFLLVF*STMRAVRKYSE Trigger: CTCTGAGTACTTCCTTACTGCCCTCATTGTGGACAAGAACACCAACAAAAACCTGGAACAACCTTCCAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CAA 72 bp | TTGACAGTGAAGCTGGAAGGTTGTTCCAGGTTTTTGTaGGTGTTCTTGTCCACAATGAGGGCAGTAAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LTVKLEGCSRFL*VFLSTMRAVRK Trigger: CTTCCTTACTGCCCTCATTGTGGACAAGAACACCAACAAAAACCTGGAACAACCTTCCAGCTTCACTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CAA 72 bp | TTGGCGGTGTTGTCATGGTTGTTTATGAGGGTGAAGTaGCTGTCCTCGTTCTTCAGGGCAAACTTGAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LAVLSWLFMRVK*LSSFFRANLNF Trigger: AAAGTTCAAGTTTGCCCTGAAGAACGAGGACAGCAACTTCACCCTCATAAACAACCATGACAACACCGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CAA 90 bp | ATATCATGCACCTTGACAGTGAAGCTGGAAGGTTGTTCCAGGTTTTaGTTGGTGTTCTTGTCCACAATGAGGGCAGTAAGGAAGTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: ISCTLTVKLEGCSRF*LVFLSTMRAVRKYS Trigger: TGAGTACTTCCTTACTGCCCTCATTGTGGACAAGAACACCAACAAAAACCTGGAACAACCTTCCAGCTTCACTGTCAAGGTGCATGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CCA 72 bp | TGTCCAGTTCTTTCTCGTTATAGATGTTTCCCTGCTTaGTTATTCGGAAGAATTGGCCTCTGTCACTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CPVLSRYRCFPA*LFGRIGLCHWS Trigger: AGACCAGTGACAGAGGCCAATTCTTCCGAATAACCAAGCAGGGAAACATCTATAACGAGAAAGAACTGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CAA 90 bp | CCAATTGTCATTTATATCATGCACCTTGACAGTGAAGCTGGAAGGTaGTTCCAGGTTTTTGTTGGTGTTCTTGTCCACAATGAGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PIVIYIMHLDSEAGR*FQVFVGVLVHNEGS Trigger: ACTGCCCTCATTGTGGACAAGAACACCAACAAAAACCTGGAACAACCTTCCAGCTTCACTGTCAAGGTGCATGATATAAATGACAATTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CCA 72 bp | ATAGCTGACATCTCTGGCACAGATGCGTTGAATACCTaGTGCGAAAACACAGGCCAATTGTCATTTATATCA | + |
|
Preference number: 6 (lower is better) Translates to: IADISGTDALNT*CENTGQLSFIS Trigger: TGATATAAATGACAATTGGCCTGTGTTTTCGCACCAGGTATTCAACGCATCTGTGCCAGAGATGTCAGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
||
| CDS CAA 72 bp | ATTTATATCATGCACCTTGACAGTGAAGCTGGAAGGTaGTTCCAGGTTTTTGTTGGTGTTCTTGTCCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: IYIMHLDSEAGR*FQVFVGVLVHN Trigger: ATTGTGGACAAGAACACCAACAAAAACCTGGAACAACCTTCCAGCTTCACTGTCAAGGTGCATGATATAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034339.10 |
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