Pregenerated sensors for CDH4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000305

Ensembl transcript IDs: ENSMUST00000000314.13, ENSMUST00000108911.2

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	ATGGGGGACGGCAGCGGGGAGGGACCTCTCGACACCAGACGGCGCTaGCACCTCGGCTCAGTTCTGCTGCTCGCCTCCAGTGCCCTTCTT	+
Preference number: 1 (lower is better) Translates to: MGDGSGEGPLDTRRR*HLGSVLLLASSALL Trigger: AAGAAGGGCACTGGAGGCGAGCAGCAGAACTGAGCCGAGGTGCCAGCGCCGTCTGGTGTCGAGAGGTCCCTCCCCGCTGCCGTCCCCCAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	GCCAGGAAGACTCGGTGCAAGATGCCCGGTCAGTGCCTGCCTTTCTaGCCCATCCCAGGGCTCTCTTGGGCCCAGACATGTGGATGTCCT	+
Preference number: 1 (lower is better) Translates to: ARKTRCKMPGQCLPF*PIPGLSWAQTCGCP Trigger: AGGACATCCACATGTCTGGGCCCAAGAGAGCCCTGGGATGGGGCAGAAAGGCAGGCACTGACCGGGCATCTTGCACCGAGTCTTCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	CCAGGGTGGCCAAGCAGCTGCCAGAGTCTAGCCAGGCTCTGCTTCTaGCATCTGCATAGCCTGGGGAGGGTGTTGAGAGCATTCAGGGGT	+
Preference number: 1 (lower is better) Translates to: PGWPSSCQSLARLCF*HLHSLGRVLRAFRG Trigger: ACCCCTGAATGCTCTCAACACCCTCCCCAGGCTATGCAGATGGCAGAAGCAGAGCCTGGCTAGACTCTGGCAGCTGCTTGGCCACCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	TGGGATAAGCCAGGAAGACTCGGTGCAAGATGCCCGGTCAGTGCCTaGCTTTCTGCCCCATCCCAGGGCTCTCTTGGGCCCAGACATGTG	+
Preference number: 1 (lower is better) Translates to: WDKPGRLGARCPVSA*LSAPSQGSLGPRHV Trigger: CACATGTCTGGGCCCAAGAGAGCCCTGGGATGGGGCAGAAAGGCAGGCACTGACCGGGCATCTTGCACCGAGTCTTCCTGGCTTATCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 90 bp	CAAACCACAGCCTTGTACTGCACAGAGCTGGCCACTGGCCTAGCTTaGCTGGGCCCTGACCACAGACGCGTTGTATCTACGAGCTACAGA	+
Preference number: 1 (lower is better) Translates to: QTTALYCTELATGLA*LGPDHRRVVSTSYR Trigger: TCTGTAGCTCGTAGATACAACGCGTCTGTGGTCAGGGCCCAGCCAAGCTAGGCCAGTGGCCAGCTCTGTGCAGTACAAGGCTGTGGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 90 bp	GCTGAAAGACATGAGAGAGAGAAGCCACTGGCCGGGAGTCAGGTGTaGCCAAGGCTGACCATGGCCAGGTGTTCTTCCAAGCCATGTACG	+
Preference number: 1 (lower is better) Translates to: AERHEREKPLAGSQV*PRLTMARCSSKPCT Trigger: CGTACATGGCTTGGAAGAACACCTGGCCATGGTCAGCCTTGGTCACACCTGACTCCCGGCCAGTGGCTTCTCTCTCTCATGTCTTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	GAGTGTATTAGAGCATGGGATAAGCCAGGAAGACTCGGTGCAAGATaGCCGGTCAGTGCCTGCCTTTCTGCCCCATCCCAGGGCTCTCTT	+
Preference number: 1 (lower is better) Translates to: ECIRAWDKPGRLGAR*PVSACLSAPSQGSL Trigger: AAGAGAGCCCTGGGATGGGGCAGAAAGGCAGGCACTGACCGGGCATCTTGCACCGAGTCTTCCTGGCTTATCCCATGCTCTAATACACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 90 bp	CTATCAGCATTCCTCAGCCCCTTCCTCGGGGAGTGTATTAGAGCATaGGATAAGCCAGGAAGACTCGGTGCAAGATGCCCGGTCAGTGCC	+
Preference number: 1 (lower is better) Translates to: LSAFLSPFLGECIRA*DKPGRLGARCPVSA Trigger: GGCACTGACCGGGCATCTTGCACCGAGTCTTCCTGGCTTATCCCATGCTCTAATACACTCCCCGAGGAAGGGGCTGAGGAATGCTGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 90 bp	AAGTCGGAACGTCTGTCTCACCGCATGGCGCTCAGAGCTGCAGTGTaGACACGTCAGACTCCGGTATCTTTCCCGAAACAACCACGGTCA	+
Preference number: 1 (lower is better) Translates to: KSERLSHRMALRAAV*TRQTPVSFPKQPRS Trigger: TGACCGTGGTTGTTTCGGGAAAGATACCGGAGTCTGACGTGTTCACACTGCAGCTCTGAGCGCCATGCGGTGAGACAGACGTTCCGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 90 bp	GTGGTTTCCACCAGCCGACTGGTGTGGCAGAGCCTGCTAGGTATGTaGTCTATGTACTACCACACCTGGTGCTCTGTGCTGGGTGATTCT	+
Preference number: 1 (lower is better) Translates to: VVSTSRLVWQSLLGM*SMYYHTWCSVLGDS Trigger: AGAATCACCCAGCACAGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCACACCAGTCGGCTGGTGGAAACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 90 bp	ATGAGAGAGAGAAGCCACTGGCCGGGAGTCAGGTGTGACCAAGGCTaGCCATGGCCAGGTGTTCTTCCAAGCCATGTACGTTTCTCCTTA	+
Preference number: 1 (lower is better) Translates to: MRERSHWPGVRCDQG*PWPGVLPSHVRFSL Trigger: TAAGGAGAAACGTACATGGCTTGGAAGAACACCTGGCCATGGTCAGCCTTGGTCACACCTGACTCCCGGCCAGTGGCTTCTCTCTCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	AGTTTGCCCTGTGTCAAGCTGTCAAGCTGCCATGGTAAAGTGCCCTaGCAGCTCCAGAGAGCAACAGAAACATGGGTCCAGACCAGAGCA	+
Preference number: 1 (lower is better) Translates to: SLPCVKLSSCHGKVP*QLQRATETWVQTRA Trigger: TGCTCTGGTCTGGACCCATGTTTCTGTTGCTCTCTGGAGCTGGCAGGGCACTTTACCATGGCAGCTTGACAGCTTGACACAGGGCAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	GAAGTGATCACCCTGCCCAGTTTGCCCTGTGTCAAGCTGTCAAGCTaGCATGGTAAAGTGCCCTGCCAGCTCCAGAGAGCAACAGAAACA	+
Preference number: 1 (lower is better) Translates to: EVITLPSLPCVKLSS*HGKVPCQLQRATET Trigger: TGTTTCTGTTGCTCTCTGGAGCTGGCAGGGCACTTTACCATGGCAGCTTGACAGCTTGACACAGGGCAAACTGGGCAGGGTGATCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	GCAGCTTTGCCATCTCCTGTAGGTCCTTGCACACAGCCTATTTGCTaGCCTACTGAAGTGATCACCCTGCCCAGTTTGCCCTGTGTCAAG	+
Preference number: 1 (lower is better) Translates to: AALPSPVGPCTQPIC*PTEVITLPSLPCVK Trigger: CTTGACACAGGGCAAACTGGGCAGGGTGATCACTTCAGTAGGGCAGCAAATAGGCTGTGTGCAAGGACCTACAGGAGATGGCAAAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 90 bp	GCCCAGCTCAAGTCCAGGAGTTTAGAGGTGGGAATGGGTTTGGTTTaGGAAAGAACCCTGACATCCAATGGGTCACACCCACAAGTTGGG	+
Preference number: 1 (lower is better) Translates to: AQLKSRSLEVGMGLV*ERTLTSNGSHPQVG Trigger: CCCAACTTGTGGGTGTGACCCATTGGATGTCAGGGTTCTTTCCCAAACCAAACCCATTCCCACCTCTAAACTCCTGGACTTGAGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 90 bp	AGACCACATACTCACTATGGGGAAACTGAGGCATCTCTGAGGGCCTaGCTTTTGGCCATTACTCTGACACTTTGGTGGCAGGAGACCCAG	+
Preference number: 1 (lower is better) Translates to: RPHTHYGETEASLRA*LLAITLTLWWQETQ Trigger: CTGGGTCTCCTGCCACCAAAGTGTCAGAGTAATGGCCAAAAGTCAGGCCCTCAGAGATGCCTCAGTTTCCCCATAGTGAGTATGTGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 90 bp	TCAAAGGGGACTTTATTTACTCCTTTGGAGCAGCGTGCTAACGCCTaGCTCCACTCCTGGACACGACAATTCCGCAAAGCTGCTGTTCCC	+
Preference number: 1 (lower is better) Translates to: SKGTLFTPLEQRANA*LHSWTRQFRKAAVP Trigger: GGGAACAGCAGCTTTGCGGAATTGTCGTGTCCAGGAGTGGAGTCAGGCGTTAGCACGCTGCTCCAAAGGAGTAAATAAAGTCCCCTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 90 bp	GGTTTGGGAAAGAACCCTGACATCCAATGGGTCACACCCACAAGTTaGGTACCCGTGAGTTCACTCAGGTGTGTCTTTGAGGCCAAAGCA	+
Preference number: 1 (lower is better) Translates to: GLGKNPDIQWVTPTS*VPVSSLRCVFEAKA Trigger: TGCTTTGGCCTCAAAGACACACCTGAGTGAACTCACGGGTACCCAACTTGTGGGTGTGACCCATTGGATGTCAGGGTTCTTTCCCAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 90 bp	GTGTGGCAGAGCCTGCTAGGTATGTGGTCTATGTACTACCACACCTaGTGCTCTGTGCTGGGTGATTCTGCTGTGAGTTTTTGGTTTTGC	+
Preference number: 1 (lower is better) Translates to: VWQSLLGMWSMYYHT*CSVLGDSAVSFWFC Trigger: GCAAAACCAAAAACTCACAGCAGAATCACCCAGCACAGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	GGTCTCATCTTGAAGAGTGGAGGGCTGAGCCAAGGTTTTGCAGGATaGCGTGGCTTCTTAGACAACATACTGTCCTGGACCAAAGCAAAA	+
Preference number: 1 (lower is better) Translates to: GLILKSGGLSQGFAG*RGFLDNILSWTKAK Trigger: TTTTGCTTTGGTCCAGGACAGTATGTTGTCTAAGAAGCCACGGCATCCTGCAAAACCTTGGCTCAGCCCTCCACTCTTCAAGATGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	TGGCAGAGCCTGCTAGGTATGTGGTCTATGTACTACCACACCTGGTaGTCTGTGCTGGGTGATTCTGCTGTGAGTTTTTGGTTTTGCCTT	+
Preference number: 1 (lower is better) Translates to: WQSLLGMWSMYYHTW*SVLGDSAVSFWFCL Trigger: AAGGCAAAACCAAAAACTCACAGCAGAATCACCCAGCACAGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 90 bp	CGTCTGGTTAAAAGCTTTGCTCCCTTGTCTAGGGTCCATTGTCTCTaGCAGTTCTCTCTTCTCCTCCTGCATCTGAGGTTTGAGCTCCAT	+
Preference number: 1 (lower is better) Translates to: RLVKSFAPLSRVHCL*QFSLLLLHLRFELH Trigger: ATGGAGCTCAAACCTCAGATGCAGGAGGAGAAGAGAGAACTGCCAGAGACAATGGACCCTAGACAAGGGAGCAAAGCTTTTAACCAGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108911.2
3UTR CCA 90 bp	CTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAGCCTTaGGACTTCAGGAGAGTTCTTGGCTACCATGCCTACCAAACATAT	+
Preference number: 1 (lower is better) Translates to: LMDLVPLIPGFLRKP*DFRRVLGYHAYQTY Trigger: ATATGTTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	TTGGGACTTCAGGAGAGTTCTTGGCTACCATGCCTACCAAACATATaGACACTTCCAAGAACCTTCTTGGGTTTTCTAAAATCAAACCCA	+
Preference number: 1 (lower is better) Translates to: LGLQESSWLPCLPNI*TLPRTFLGFLKSNP Trigger: TGGGTTTGATTTTAGAAAACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 90 bp	TTGTATCTACGAGCTACAGAAGAGAAACATTTGACACTGACTGTATaGTTGGCTAATGCTAACTTGTTGGCCTGGGAACAGAGTTCCAAG	+
Preference number: 1 (lower is better) Translates to: LYLRATEEKHLTLTV*LANANLLAWEQSSK Trigger: CTTGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGCCAAGCATACAGTCAGTGTCAAATGTTTCTCTTCTGTAGCTCGTAGATACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 90 bp	TTTGAAACCCTCCTAGCCCCCAGTAGTAGATATGGGTTAGAGATATaGAAGAAACTTATTTTTCATCAGTGCTGGGACTTCTGTTGTCTC	+
Preference number: 1 (lower is better) Translates to: FETLLAPSSRYGLEI*KKLIFHQCWDFCCL Trigger: GAGACAACAGAAGTCCCAGCACTGATGAAAAATAAGTTTCTTCCATATCTCTAACCCATATCTACTACTGGGGGCTAGGAGGGTTTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR TCA 90 bp	CCTGGACACGACAATTCCGCAAAGCTGCTGTTCCCTTCGGAACCAAGACTGCCTGCAGGGGCCTGGCAGTaGCAGAGGCCTTGGGAGTGG	+
Preference number: 2 (lower is better) Translates to: PGHDNSAKLLFPSEPRLPAGAWQ*QRPWEW Trigger: CCACTCCCAAGGCCTCTGTCACTGCCAGGCCCCTGC...AGGCAGTCTTGGTTCCGAAGGGAACAGCAGCTTTGCGGAATTGTCGTGTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR GCA 90 bp	CACGTCAGACTCCGGTATCTTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCCCCCGTGGATGTTCCTaGAGGGGCCTGGCAGTGACA	+
Preference number: 2 (lower is better) Translates to: HVRLRYLSRNNHGHAGCCPRGCS*RGLAVT Trigger: TGTCACTGCCAGGCCCCTGCAGGAACATCCACGGGG...GCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAAGATACCGGAGTCTGACGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTGGCTGTGGGGCAAGGTaGACAGAGGTGGGGGCCTCG	+
Preference number: 2 (lower is better) Translates to: YCPGPKQKGTLVVLGATAGCGAR*TEVGAS Trigger: CGAGGCCCCCACCTCTGTCCACCTTGCCCCACAGCC...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	CGAGCAATTTGCATAGGACAGCCCTCCCAACCCTTTCATGAGCTCTGCTGCCCTGTGGGACTGGGGCTGTaGGGCAAGGTGGACAGAGGT	+
Preference number: 2 (lower is better) Translates to: RAICIGQPSQPFHELCCPVGLGL*GKVDRG Trigger: ACCTCTGTCCACCTTGCCCCACAGCCCCAGTCCCAC...AGGGCAGCAGAGCTCATGAAAGGGTTGGGAGGGCTGTCCTATGCAAATTGCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	TGCCCCATCCCAGGGCTCTCTTGGGCCCAGACATGTGGATGTCCTAGGTCTGTTAGAGGTGAGAGCTCCTaGGAAGGTCTCCAGGCATCG	+
Preference number: 2 (lower is better) Translates to: CPIPGLSWAQTCGCPRSVRGESS*EGLQAS Trigger: CGATGCCTGGAGACCTTCCCAGGAGCTCTCACCTCT...AACAGACCTAGGACATCCACATGTCTGGGCCCAAGAGAGCCCTGGGATGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR TCA 90 bp	CACGTCAGACTCCGGTATCTTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCGCTTTATGGTGGGCTTaGGGGCACAGAAGTGGCCAA	+
Preference number: 2 (lower is better) Translates to: HVRLRYLSRNNHGHAGCCALWWA*GHRSGQ Trigger: TTGGCCACTTCTGTGCCCTCAAGCCCACCATAAAGC...GCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAAGATACCGGAGTCTGACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 90 bp	ACCCACGACACACCAGTGGCCATGCCAAGCTCAGCACCACCCGAATaGTTTGCCGATTCGAGCAATTTGCATAGGACAGCCCTCCCAACC	+
Preference number: 2 (lower is better) Translates to: THDTPVAMPSSAPPE*FADSSNLHRTALPT Trigger: GGTTGGGAGGGCTGTCCTATGCAAATTGCTCGAATCGGCAAACAATTCGGGTGGTGCTGAGCTTGGCATGGCCACTGGTGTGTCGTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	CATCTCAACAGACCACATACTCACTATGGGGAAACTGAGGCATCTCTGAGGGCCCAAGGTGGACAGAGGTaGGGGCCTCGGGCTGTCTCT	+
Preference number: 2 (lower is better) Translates to: HLNRPHTHYGETEASLRAQGGQR*GPRAVS Trigger: AGAGACAGCCCGAGGCCCCCACCTCTGTCCACCTTG...GGCCCTCAGAGATGCCTCAGTTTCCCCATAGTGAGTATGTGGTCTGTTGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	TTTGGTGCTGGAAAGCCAGATCCTCACCTAACAGCCTTGGGGAGCCTAAAGGGCTTAGAAGGTACCAGGTaGGACTGGGGCTGTGGGGCA	+
Preference number: 2 (lower is better) Translates to: FGAGKPDPHLTALGSLKGLEGTR*DWGCGA Trigger: TGCCCCACAGCCCCAGTCCCACCTGGTACCTTCTAA...GCCCTTTAGGCTCCCCAAGGCTGTTAGGTGAGGATCTGGCTTTCCAGCACCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR TCA 90 bp	GCTTGGCTAATGCTAACTTGTTGGCCTGGGAACAGAGTTCCAAGATGGGTCTGGCTCCCAACCCTTTCATaGGCTCTGCTGCCCTGGCTG	+
Preference number: 2 (lower is better) Translates to: AWLMLTCWPGNRVPRWVWLPTLS*ALLPWL Trigger: CAGCCAGGGCAGCAGAGCTCATGAAAGGGTTGGGAG...CCAGACCCATCTTGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGCCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR TCA 90 bp	GTGACCAAGGCTGACCATGGCCAGGTGTTCTTCCAAGCCATGTACGTTTCTCCTTGCTGGGGTGCAGGGTaGAAGGGACAAGCTGTTCAG	+
Preference number: 2 (lower is better) Translates to: VTKADHGQVFFQAMYVSPCWGAG*KGQAVQ Trigger: CTGAACAGCTTGTCCCTTTCACCCTGCACCCCAGCA...AGGAGAAACGTACATGGCTTGGAAGAACACCTGGCCATGGTCAGCCTTGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	TTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCACATTTGTCCATTTTCAAAGGTACCAGGTGGGACTaGGGCTGTGGGGCAAGGTGG	+
Preference number: 2 (lower is better) Translates to: FPETTTVMRAAAHLSIFKGTRWD*GCGARW Trigger: CCACCTTGCCCCACAGCCCCAGTCCCACCTGGTACC...TTTGAAAATGGACAAATGTGCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 90 bp	GCTTGTGATTGCTATGCCTTCAACAGGATCCCTCAGGGTCTCATCTaGAAGAGTGGAGGGCTGAGCCAAGGTTTTGCAGGATGCCGTGGC	+
Preference number: 2 (lower is better) Translates to: ACDCYAFNRIPQGLI*KSGGLSQGFAGCRG Trigger: GCCACGGCATCCTGCAAAACCTTGGCTCAGCCCTCCACTCTTCAAGATGAGACCCTGAGGGATCCTGTTGAAGGCATAGCAATCACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 90 bp	ACGACACACCAGTGGCCATGCCAAGCTCAGCACCACCCGAATTGTTaGCCGATTCGAGCAATTTGCATAGGACAGCCCTCCCAACCCTTT	+
Preference number: 2 (lower is better) Translates to: TTHQWPCQAQHHPNC*PIRAICIGQPSQPF Trigger: AAAGGGTTGGGAGGGCTGTCCTATGCAAATTGCTCGAATCGGCAAACAATTCGGGTGGTGCTGAGCTTGGCATGGCCACTGGTGTGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR GCA 90 bp	GTGACCAAGGCTGACCATGGCCAGGTGTTCTTCCAAGCCATGTACGTTTCTCCTGGCCTATGTCCATACTaGAGAGCTCCACATGGGGGA	+
Preference number: 2 (lower is better) Translates to: VTKADHGQVFFQAMYVSPGLCPY*RAPHGG Trigger: TCCCCCATGTGGAGCTCTGCAGTATGGACATAGGCC...AGGAGAAACGTACATGGCTTGGAAGAACACCTGGCCATGGTCAGCCTTGGTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR GCA 90 bp	CATCTCAACAGACCACATACTCACTATGGGGAAACTGAGGCATCTCTGAGGGCCACCACAGCCTTGTACTaGACAGAGCTGGCCACTGGC	+
Preference number: 2 (lower is better) Translates to: HLNRPHTHYGETEASLRATTALY*TELATG Trigger: GCCAGTGGCCAGCTCTGTGCAGTACAAGGCTGTGGT...GGCCCTCAGAGATGCCTCAGTTTCCCCATAGTGAGTATGTGGTCTGTTGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	CCGATACTAAGGCCTCCCAAGCTATCAGCATTCCTCAGCCCCTTCCTCGGGGAGGACAACATACTGTCCTaGACCAAAGCAAAAAGGGAC	+
Preference number: 2 (lower is better) Translates to: PILRPPKLSAFLSPFLGEDNILS*TKAKRD Trigger: GTCCCTTTTTGCTTTGGTCCAGGACAGTATGTTGTC...CTCCCCGAGGAAGGGGCTGAGGAATGCTGATAGCTTGGGAGGCCTTAGTATCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	AAGGAGCCAAACCACAGCCTTGTACTGCACAGAGCTGGCCACTGGCCTAGCTTGCTTCAGGAGAGTTCTTaGCTACCATGCCTACCAAAC	+
Preference number: 2 (lower is better) Translates to: KEPNHSLVLHRAGHWPSLLQESS*LPCLPN Trigger: GTTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAG...CAAGCTAGGCCAGTGGCCAGCTCTGTGCAGTACAAGGCTGTGGTTTGGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	CACGTCAGACTCCGGTATCTTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCAACAGAGTTCCAAGATaGGTCTGGGGATGTGTAAGA	+
Preference number: 2 (lower is better) Translates to: HVRLRYLSRNNHGHAGCCNRVPR*VWGCVR Trigger: TCTTACACATCCCCAGACCCATCTTGGAACTCTGTT...GCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAAGATACCGGAGTCTGACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 90 bp	AGCCCAGCTCAAGTCCAGGAGTTTAGAGGTGGGAATGGGTTTGGTTaGGGAAAGAACCCTGACATCCAATGGGTCACACCCACAAGTTGG	+
Preference number: 2 (lower is better) Translates to: SPAQVQEFRGGNGFG*GKNPDIQWVTPTSW Trigger: CCAACTTGTGGGTGTGACCCATTGGATGTCAGGGTTCTTTCCCAAACCAAACCCATTCCCACCTCTAAACTCCTGGACTTGAGCTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR GCA 90 bp	CATCTCAACAGACCACATACTCACTATGGGGAAACTGAGGCATCTCTGAGGGCCCATGGTAAAGTGCCCTaGCAGCTCCAGAGAGCAACA	+
Preference number: 2 (lower is better) Translates to: HLNRPHTHYGETEASLRAHGKVP*QLQRAT Trigger: TGTTGCTCTCTGGAGCTGGCAGGGCACTTTACCATG...GGCCCTCAGAGATGCCTCAGTTTCCCCATAGTGAGTATGTGGTCTGTTGAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	GTGACCAAGGCTGACCATGGCCAGGTGTTCTTCCAAGCCATGTACGTTTCTCCTAACCCTGACATCCAATaGGTCACACCCACAAGTTGG	+
Preference number: 2 (lower is better) Translates to: VTKADHGQVFFQAMYVSPNPDIQ*VTPTSW Trigger: CCAACTTGTGGGTGTGACCCATTGGATGTCAGGGTT...AGGAGAAACGTACATGGCTTGGAAGAACACCTGGCCATGGTCAGCCTTGGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	TTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCACATTTGTCCATTTTCAAAAGAGAGAGAAGCCACTaGCCGGGAGTCAGGTGTGAC	+
Preference number: 2 (lower is better) Translates to: FPETTTVMRAAAHLSIFKRERSH*PGVRCD Trigger: GTCACACCTGACTCCCGGCCAGTGGCTTCTCTCTCT...TTTGAAAATGGACAAATGTGCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR GCA 90 bp	TGCCTCCAGGTAACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAGCCAGGCTCTGCTTCTaGCATCTGCATAGCCTGGGG	+
Preference number: 2 (lower is better) Translates to: CLQVTDGFGTSHPRLFKKARLCF*HLHSLG Trigger: CCCCAGGCTATGCAGATGGCAGAAGCAGAGCCTGGC...TTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGTTACCTGGAGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR GCA 90 bp	AAGGAGCCAAACCACAGCCTTGTACTGCACAGAGCTGGCCACTGGCCTAGCTTGTGCCTACCAAACATATaGACACTTCCAAGAACCTTC	+
Preference number: 2 (lower is better) Translates to: KEPNHSLVLHRAGHWPSLCLPNI*TLPRTF Trigger: GAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCA...CAAGCTAGGCCAGTGGCCAGCTCTGTGCAGTACAAGGCTGTGGTTTGGCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	GTGACCAAGGCTGACCATGGCCAGGTGTTCTTCCAAGCCATGTACGTTTCTCCTGGAATGGGTTTGGTTTaGGAAAGAACCCTGACATCC	+
Preference number: 2 (lower is better) Translates to: VTKADHGQVFFQAMYVSPGMGLV*ERTLTS Trigger: GGATGTCAGGGTTCTTTCCCAAACCAAACCCATTCC...AGGAGAAACGTACATGGCTTGGAAGAACACCTGGCCATGGTCAGCCTTGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR GCA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTTTGTCTCCCACTCCTTaGTTGTTGCCTTTAGAAGGT	+
Preference number: 2 (lower is better) Translates to: YCPGPKQKGTLVVLGATALSPTP*LLPLEG Trigger: ACCTTCTAAAGGCAACAAGCAAGGAGTGGGAGACAA...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR GCA 90 bp	TTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCACATTTGTCCATTTTCAAAGCTGAGCCAAGGTTTTaGAGGATGCCGTGGCTTCTT	+
Preference number: 2 (lower is better) Translates to: FPETTTVMRAAAHLSIFKAEPRF*RMPWLL Trigger: AAGAAGCCACGGCATCCTGCAAAACCTTGGCTCAGC...TTTGAAAATGGACAAATGTGCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	TCTTGGCTACCATGCCTACCAAACATATGCACACTTCCAAGAACCTTCTTGGGTATCCCAGGGCTCTCTTaGGCCCAGACATGTGGATGT	+
Preference number: 2 (lower is better) Translates to: SWLPCLPNICTLPRTFLGIPGLS*AQTCGC Trigger: ACATCCACATGTCTGGGCCCAAGAGAGCCCTGGGAT...ACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	GTGACCAAGGCTGACCATGGCCAGGTGTTCTTCCAAGCCATGTACGTTTCTCCTCTAATGCTAACTTGTTaGCCTGGGAACAGAGTTCCA	+
Preference number: 2 (lower is better) Translates to: VTKADHGQVFFQAMYVSPLMLTC*PGNRVP Trigger: TGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAG...AGGAGAAACGTACATGGCTTGGAAGAACACCTGGCCATGGTCAGCCTTGGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR TCA 90 bp	TTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCACATTTGTCCATTTTCAAAACTCAGGTGTGTCTTTaGGGCCAAAGCAGTCTGGAA	+
Preference number: 2 (lower is better) Translates to: FPETTTVMRAAAHLSIFKTQVCL*GQSSLE Trigger: TTCCAGACTGCTTTGGCCTCAAAGACACACCTGAGT...TTTGAAAATGGACAAATGTGCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 90 bp	GAGAAACATTTGACACTGACTGTATGCTTGGCTAATGCTAACTTGTaGGCCTGGGAACAGAGTTCCAAGATGGGTCTGGGGATGTGTAAG	+
Preference number: 2 (lower is better) Translates to: EKHLTLTVCLANANL*AWEQSSKMGLGMCK Trigger: CTTACACATCCCCAGACCCATCTTGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGCCAAGCATACAGTCAGTGTCAAATGTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	TTTAAGAAAGCCTTGGGACTTCAGGAGAGTTCTTGGCTACCATGCCTACCAAACGCATCTGTGGTCACATaGGCACAGAGCAAGATAATC	+
Preference number: 2 (lower is better) Translates to: FKKALGLQESSWLPCLPNASVVT*AQSKII Trigger: GATTATCTTGCTCTGTGCCCATGTGACCACAGATGC...GTTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	TTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCACATTTGTCCATTTTCAAAGAGTGTATTAGAGCATaGGATAAGCCAGGAAGACTC	+
Preference number: 2 (lower is better) Translates to: FPETTTVMRAAAHLSIFKECIRA*DKPGRL Trigger: GAGTCTTCCTGGCTTATCCCATGCTCTAATACACTC...TTTGAAAATGGACAAATGTGCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 90 bp	ACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAGCCTaGGGACTTCAGGAGAGTTCTTGGCTACCATGCCTACCAAACATA	+
Preference number: 2 (lower is better) Translates to: TDGFGTSHPRLFKKA*GLQESSWLPCLPNI Trigger: TATGTTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CCA 90 bp	TTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCACATTTGTCCATTTTCAAATTTTGCCTTTCAGTGTaGGTAGAAATAGAGACTTCC	+
Preference number: 2 (lower is better) Translates to: FPETTTVMRAAAHLSIFKFCLSV*VEIETS Trigger: GGAAGTCTCTATTTCTACCCACACTGAAAGGCAAAA...TTTGAAAATGGACAAATGTGCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 90 bp	TATCTACGAGCTACAGAAGAGAAACATTTGACACTGACTGTATGCTaGGCTAATGCTAACTTGTTGGCCTGGGAACAGAGTTCCAAGATG	+
Preference number: 2 (lower is better) Translates to: YLRATEEKHLTLTVC*ANANLLAWEQSSKM Trigger: CATCTTGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGCCAAGCATACAGTCAGTGTCAAATGTTTCTCTTCTGTAGCTCGTAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	GGCAGCGGGGAGGGACCTCTCGACACCAGACGGCGCTaGCACCTCGGCTCAGTTCTGCTGCTCGCCTCCAGT	+
Preference number: 3 (lower is better) Translates to: GSGEGPLDTRRR*HLGSVLLLASS Trigger: ACTGGAGGCGAGCAGCAGAACTGAGCCGAGGTGCCAGCGCCGTCTGGTGTCGAGAGGTCCCTCCCCGCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 72 bp	CTCTCCCTTCGCAGTACGTGGCTGTGGCTACCGAGATaGCGCAGTGATGATGGGTGCCCGGTGGCCTATGTC	+
Preference number: 3 (lower is better) Translates to: LSLRSTWLWLPR*RSDDGCPVAYV Trigger: GACATAGGCCACCGGGCACCCATCATCACTGCGGCATCTCGGTAGCCACAGCCACGTACTGCGAAGGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	GCCTTGTACTGCACAGAGCTGGCCACTGGCCTAGCTTaGCTGGGCCCTGACCACAGACGCGTTGTATCTACG	+
Preference number: 3 (lower is better) Translates to: ALYCTELATGLA*LGPDHRRVVST Trigger: CGTAGATACAACGCGTCTGTGGTCAGGGCCCAGCCAAGCTAGGCCAGTGGCCAGCTCTGTGCAGTACAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 72 bp	CCAAGCAGCTGCCAGAGTCTAGCCAGGCTCTGCTTCTaGCATCTGCATAGCCTGGGGAGGGTGTTGAGAGCA	+
Preference number: 3 (lower is better) Translates to: PSSCQSLARLCF*HLHSLGRVLRA Trigger: TGCTCTCAACACCCTCCCCAGGCTATGCAGATGGCAGAAGCAGAGCCTGGCTAGACTCTGGCAGCTGCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 72 bp	AGAGCATGGGATAAGCCAGGAAGACTCGGTGCAAGATaGCCGGTCAGTGCCTGCCTTTCTGCCCCATCCCAG	+
Preference number: 3 (lower is better) Translates to: RAWDKPGRLGAR*PVSACLSAPSQ Trigger: CTGGGATGGGGCAGAAAGGCAGGCACTGACCGGGCATCTTGCACCGAGTCTTCCTGGCTTATCCCATGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	CCGATACTAAGGCCTCCCAAGCTATCAGCATTCCTCAGCCCCTTCCTCGGGGAGATCACCCTGCCCAGTTaGCCCTGTGTCAAGCTGTCA	+
Preference number: 3 (lower is better) Translates to: PILRPPKLSAFLSPFLGEITLPS*PCVKLS Trigger: TGACAGCTTGACACAGGGCAAACTGGGCAGGGTGAT...CTCCCCGAGGAAGGGGCTGAGGAATGCTGATAGCTTGGGAGGCCTTAGTATCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 72 bp	AGAAGCCACTGGCCGGGAGTCAGGTGTGACCAAGGCTaGCCATGGCCAGGTGTTCTTCCAAGCCATGTACGT	+
Preference number: 3 (lower is better) Translates to: RSHWPGVRCDQG*PWPGVLPSHVR Trigger: ACGTACATGGCTTGGAAGAACACCTGGCCATGGTCAGCCTTGGTCACACCTGACTCCCGGCCAGTGGCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 72 bp	CATGAGAGAGAGAAGCCACTGGCCGGGAGTCAGGTGTaGCCAAGGCTGACCATGGCCAGGTGTTCTTCCAAG	+
Preference number: 3 (lower is better) Translates to: HEREKPLAGSQV*PRLTMARCSSK Trigger: CTTGGAAGAACACCTGGCCATGGTCAGCCTTGGTCACACCTGACTCCCGGCCAGTGGCTTCTCTCTCTCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 72 bp	ACCCTGCCCAGTTTGCCCTGTGTCAAGCTGTCAAGCTaGCATGGTAAAGTGCCCTGCCAGCTCCAGAGAGCA	+
Preference number: 3 (lower is better) Translates to: TLPSLPCVKLSS*HGKVPCQLQRA Trigger: TGCTCTCTGGAGCTGGCAGGGCACTTTACCATGGCAGCTTGACAGCTTGACACAGGGCAAACTGGGCAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	CCTGGACACGACAATTCCGCAAAGCTGCTGTTCCCTTCGGAACCAAGACTGCCTCCTCAGGGTCTCATCTaGAAGAGTGGAGGGCTGAGC	+
Preference number: 3 (lower is better) Translates to: PGHDNSAKLLFPSEPRLPPQGLI*KSGGLS Trigger: GCTCAGCCCTCCACTCTTCAAGATGAGACCCTGAGG...AGGCAGTCTTGGTTCCGAAGGGAACAGCAGCTTTGCGGAATTGTCGTGTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	GTGACCAAGGCTGACCATGGCCAGGTGTTCTTCCAAGCCATGTACGTTTCTCCTCATCCCAGGGCTCTCTaGGGCCCAGACATGTGGATG	+
Preference number: 3 (lower is better) Translates to: VTKADHGQVFFQAMYVSPHPRAL*GPDMWM Trigger: CATCCACATGTCTGGGCCCAAGAGAGCCCTGGGATG...AGGAGAAACGTACATGGCTTGGAAGAACACCTGGCCATGGTCAGCCTTGGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	CACGTCAGACTCCGGTATCTTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCCATTACTCTGACACTTaGGTGGCAGGAGACCCAGCA	+
Preference number: 3 (lower is better) Translates to: HVRLRYLSRNNHGHAGCCHYSDT*VAGDPA Trigger: TGCTGGGTCTCCTGCCACCAAAGTGTCAGAGTAATG...GCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAAGATACCGGAGTCTGACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	GGCCACTTGGTAGGTCCTGACATCCATAGCAGTTCATaGGACCAGGCAGGAGCTCAGGTTAAACGGGTCCAG	+
Preference number: 3 (lower is better) Translates to: GHLVGPDIHSSS*DQAGAQVKRVQ Trigger: CTGGACCCGTTTAACCTGAGCTCCTGCCTGGTCCCATGAACTGCTATGGATGTCAGGACCTACCAAGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	TTCCTCAGCCCCTTCCTCGGGGAGTGTATTAGAGCATaGGATAAGCCAGGAAGACTCGGTGCAAGATGCCCG	+
Preference number: 3 (lower is better) Translates to: FLSPFLGECIRA*DKPGRLGARCP Trigger: CGGGCATCTTGCACCGAGTCTTCCTGGCTTATCCCATGCTCTAATACACTCCCCGAGGAAGGGGCTGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	ACCAGCCGACTGGTGTGGCAGAGCCTGCTAGGTATGTaGTCTATGTACTACCACACCTGGTGCTCTGTGCTG	+
Preference number: 3 (lower is better) Translates to: TSRLVWQSLLGM*SMYYHTWCSVL Trigger: CAGCACAGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCACACCAGTCGGCTGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	GTGTGGCAGAGCCTGCTAGGTATGTGGTCTATGTACTACCACACCTGGTGCTCTAGCCAAACCACAGCCTaGTACTGCACAGAGCTGGCC	+
Preference number: 3 (lower is better) Translates to: VWQSLLGMWSMYYHTWCSSQTTA*YCTELA Trigger: GGCCAGCTCTGTGCAGTACAAGGCTGTGGTTTGGCT...AGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 72 bp	CGTCTGTCTCACCGCATGGCGCTCAGAGCTGCAGTGTaGACACGTCAGACTCCGGTATCTTTCCCGAAACAA	+
Preference number: 3 (lower is better) Translates to: RLSHRMALRAAV*TRQTPVSFPKQ Trigger: TTGTTTCGGGAAAGATACCGGAGTCTGACGTGTTCACACTGCAGCTCTGAGCGCCATGCGGTGAGACAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 72 bp	TGCCCTGTGTCAAGCTGTCAAGCTGCCATGGTAAAGTaGCCTGCCAGCTCCAGAGAGCAACAGAAACATGGG	+
Preference number: 3 (lower is better) Translates to: CPVSSCQAAMVK*PASSREQQKHG Trigger: CCCATGTTTCTGTTGCTCTCTGGAGCTGGCAGGGCACTTTACCATGGCAGCTTGACAGCTTGACACAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 72 bp	CTGACTCCACTCCTGGACACGACAATTCCGCAAAGCTaGTGTTCCCTTCGGAACCAAGACTGCCTGGCACTA	+
Preference number: 3 (lower is better) Translates to: LTPLLDTTIPQS*CSLRNQDCLAL Trigger: TAGTGCCAGGCAGTCTTGGTTCCGAAGGGAACAGCAGCTTTGCGGAATTGTCGTGTCCAGGAGTGGAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	GAGAGAGGCTTTATGGTGGGCTTGAGGGCACAGAAGTaGCCAAATAGAGAGGTGAGAGCTCCTGGGAAGGTC	+
Preference number: 3 (lower is better) Translates to: ERGFMVGLRAQK*PNREVRAPGKV Trigger: GACCTTCCCAGGAGCTCTCACCTCTCTATTTGGCCACTTCTGTGCCCTCAAGCCCACCATAAAGCCTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	CCTGGACACGACAATTCCGCAAAGCTGCTGTTCCCTTCGGAACCAAGACTGCCTCCCACTCCTTGCTTGTaGCCTTTAGAAGGTACCAGG	+
Preference number: 3 (lower is better) Translates to: PGHDNSAKLLFPSEPRLPPTPCL*PLEGTR Trigger: CCTGGTACCTTCTAAAGGCAACAAGCAAGGAGTGGG...AGGCAGTCTTGGTTCCGAAGGGAACAGCAGCTTTGCGGAATTGTCGTGTCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 72 bp	GTCCTTGCACACAGCCTATTTGCTGCCCTACTGAAGTaGTCACCCTGCCCAGTTTGCCCTGTGTCAAGCTGT	+
Preference number: 3 (lower is better) Translates to: VLAHSLFAALLK*SPCPVCPVSSC Trigger: ACAGCTTGACACAGGGCAAACTGGGCAGGGTGATCACTTCAGTAGGGCAGCAAATAGGCTGTGTGCAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 72 bp	TGTGTCAAGCTGTCAAGCTGCCATGGTAAAGTGCCCTaGCAGCTCCAGAGAGCAACAGAAACATGGGTCCAG	+
Preference number: 3 (lower is better) Translates to: CVKLSSCHGKVP*QLQRATETWVQ Trigger: CTGGACCCATGTTTCTGTTGCTCTCTGGAGCTGGCAGGGCACTTTACCATGGCAGCTTGACAGCTTGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	CAACATACTGTCCTGGACCAAAGCAAAAAGGGACCTTaGTGGTATTGGGGGCGACAGCTGGTCCAGAGAGAG	+
Preference number: 3 (lower is better) Translates to: QHTVLDQSKKGP*WYWGRQLVQRE Trigger: CTCTCTCTGGACCAGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTATGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 72 bp	TGTAGGTCCTTGCACACAGCCTATTTGCTGCCCTACTaGAGTGATCACCCTGCCCAGTTTGCCCTGTGTCAA	+
Preference number: 3 (lower is better) Translates to: CRSLHTAYLLPY*SDHPAQFALCQ Trigger: TTGACACAGGGCAAACTGGGCAGGGTGATCACTTCAGTAGGGCAGCAAATAGGCTGTGTGCAAGGACCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 72 bp	CAGTGCTTTTGTGGTAAGAAATTCAAGTTAGGGCTGTaGCTCTGGCTCTCCCTTCGCAGTACGTGGCTGTGG	+
Preference number: 3 (lower is better) Translates to: QCFCGKKFKLGL*LWLSLRSTWLW Trigger: CCACAGCCACGTACTGCGAAGGGAGAGCCAGAGGCACAGCCCTAACTTGAATTTCTTACCACAAAAGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 72 bp	TTGAAGAGTGGAGGGCTGAGCCAAGGTTTTGCAGGATaGCGTGGCTTCTTAGACAACATACTGTCCTGGACC	+
Preference number: 3 (lower is better) Translates to: LKSGGLSQGFAG*RGFLDNILSWT Trigger: GGTCCAGGACAGTATGTTGTCTAAGAAGCCACGGCATCCTGCAAAACCTTGGCTCAGCCCTCCACTCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR GCA 72 bp	TTGCCATCTCCTGTAGGTCCTTGCACACAGCCTATTTaGTGCCCTACTGAAGTGATCACCCTGCCCAGTTTG	+
Preference number: 3 (lower is better) Translates to: LPSPVGPCTQPI*CPTEVITLPSL Trigger: CAAACTGGGCAGGGTGATCACTTCAGTAGGGCAGCAAATAGGCTGTGTGCAAGGACCTACAGGAGATGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	TTTTGTGGTAAGAAATTCAAGTTAGGGCTGTGCCTCTaGCTCTCCCTTCGCAGTACGTGGCTGTGGCTACCG	+
Preference number: 3 (lower is better) Translates to: FCGKKFKLGLCL*LSLRSTWLWLP Trigger: CGGTAGCCACAGCCACGTACTGCGAAGGGAGAGCCAGAGGCACAGCCCTAACTTGAATTTCTTACCACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTTCTCCCACTCCTTGCTaGTTGCCTTTAGAAGGTACC	+
Preference number: 3 (lower is better) Translates to: YCPGPKQKGTLVVLGATASPTPC*LPLEGT Trigger: GGTACCTTCTAAAGGCAACAAGCAAGGAGTGGGAGA...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	GTGTGGCAGAGCCTGCTAGGTATGTGGTCTATGTACTACCACACCTGGTGCTCTATCTCCTGTAGGTCCTaGCACACAGCCTATTTGCTG	+
Preference number: 3 (lower is better) Translates to: VWQSLLGMWSMYYHTWCSISCRS*HTAYLL Trigger: CAGCAAATAGGCTGTGTGCAAGGACCTACAGGAGAT...AGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	GTGTGGCAGAGCCTGCTAGGTATGTGGTCTATGTACTACCACACCTGGTGCTCTGCTAATGCTAACTTGTaGGCCTGGGAACAGAGTTCC	+
Preference number: 3 (lower is better) Translates to: VWQSLLGMWSMYYHTWCSANANL*AWEQSS Trigger: GGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGC...AGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	TCTTGGCTACCATGCCTACCAAACATATGCACACTTCCAAGAACCTTCTTGGGTGGCTTTATGGTGGGCTaGAGGGCACAGAAGTGGCCA	+
Preference number: 3 (lower is better) Translates to: SWLPCLPNICTLPRTFLGGFMVG*RAQKWP Trigger: TGGCCACTTCTGTGCCCTCAAGCCCACCATAAAGCC...ACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	TTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCACATTTGTCCATTTTCAAAGCCGATTCGAGCAATTaGCATAGGACAGCCCTCCCA	+
Preference number: 3 (lower is better) Translates to: FPETTTVMRAAAHLSIFKADSSN*HRTALP Trigger: TGGGAGGGCTGTCCTATGCAAATTGCTCGAATCGGC...TTTGAAAATGGACAAATGTGCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 72 bp	TTGAGAGCATTCAGGGGTTCCATTGAGGGGAGCTTGTaGTTGCTATGCCTTCAACAGGATCCCTCAGGGTCT	+
Preference number: 3 (lower is better) Translates to: LRAFRGSIEGSL*LLCLQQDPSGS Trigger: AGACCCTGAGGGATCCTGTTGAAGGCATAGCAATCACAAGCTCCCCTCAATGGAACCCCTGAATGCTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	ACTTGTTGGCCTGGGAACAGAGTTCCAAGATGGGTCTaGGGATGTGTAAGACCCTATTTTCCTCCAGCCCTA	+
Preference number: 3 (lower is better) Translates to: TCWPGNRVPRWV*GCVRPYFPPAL Trigger: TAGGGCTGGAGGAAAATAGGGTCTTACACATCCCCAGACCCATCTTGGAACTCTGTTCCCAGGCCAACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	CATCTCAACAGACCACATACTCACTATGGGGAAACTGAGGCATCTCTGAGGGCCACTTCAGGAGAGTTCTaGGCTACCATGCCTACCAAA	+
Preference number: 3 (lower is better) Translates to: HLNRPHTHYGETEASLRATSGEF*ATMPTK Trigger: TTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAGT...GGCCCTCAGAGATGCCTCAGTTTCCCCATAGTGAGTATGTGGTCTGTTGAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	CCTGGACACGACAATTCCGCAAAGCTGCTGTTCCCTTCGGAACCAAGACTGCCTCTTTTTAAGAAAGCCTaGGGACTTCAGGAGAGTTCT	+
Preference number: 3 (lower is better) Translates to: PGHDNSAKLLFPSEPRLPLFKKA*GLQESS Trigger: AGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAAAAG...AGGCAGTCTTGGTTCCGAAGGGAACAGCAGCTTTGCGGAATTGTCGTGTCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	CTGACTGTATGCTTGGCTAATGCTAACTTGTTGGCCTaGGAACAGAGTTCCAAGATGGGTCTGGGGATGTGT	+
Preference number: 3 (lower is better) Translates to: LTVCLANANLLA*EQSSKMGLGMC Trigger: ACACATCCCCAGACCCATCTTGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGCCAAGCATACAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	AGCCTGCTAGGTATGTGGTCTATGTACTACCACACCTaGTGCTCTGTGCTGGGTGATTCTGCTGTGAGTTTT	+
Preference number: 3 (lower is better) Translates to: SLLGMWSMYYHT*CSVLGDSAVSF Trigger: AAAACTCACAGCAGAATCACCCAGCACAGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	CATCTCAACAGACCACATACTCACTATGGGGAAACTGAGGCATCTCTGAGGGCCCCCAGCATTATGGATTaGCTGAAAGACATGAGAGAG	+
Preference number: 3 (lower is better) Translates to: HLNRPHTHYGETEASLRAPSIMD*LKDMRE Trigger: CTCTCTCATGTCTTTCAGCAAATCCATAATGCTGGG...GGCCCTCAGAGATGCCTCAGTTTCCCCATAGTGAGTATGTGGTCTGTTGAGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	TTGGTACCTCTCATCCCAGGCTTTTTAAGAAAGCCTTaGGACTTCAGGAGAGTTCTTGGCTACCATGCCTAC	+
Preference number: 3 (lower is better) Translates to: LVPLIPGFLRKP*DFRRVLGYHAY Trigger: GTAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAAAAGCCTGGGATGAGAGGTACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	TGCCTCCAGGTAACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAAAGCAAAAAGGGACCTaGGTGGTATTGGGGGCGACA	+
Preference number: 3 (lower is better) Translates to: CLQVTDGFGTSHPRLFKKKQKGT*VVLGAT Trigger: TGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTT...TTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGTTACCTGGAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR TCA 72 bp	GTCTATGTACTACCACACCTGGTGCTCTGTGCTGGGTaGTTCTGCTGTGAGTTTTTGGTTTTGCCTTTCAGT	+
Preference number: 3 (lower is better) Translates to: VYVLPHLVLCAG*FCCEFLVLPFS Trigger: ACTGAAAGGCAAAACCAAAAACTCACAGCAGAATCACCCAGCACAGAGCACCAGGTGTGGTAGTACATAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	TGCCTCCAGGTAACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAATTGTCTCCCACTCCTaGCTTGTTGCCTTTAGAAGG	+
Preference number: 3 (lower is better) Translates to: CLQVTDGFGTSHPRLFKKIVSHS*LVAFRR Trigger: CCTTCTAAAGGCAACAAGCAAGGAGTGGGAGACAAT...TTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGTTACCTGGAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	TGCCTCCAGGTAACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAGCTATTTACAGTATATaGGGGCAGGGCACAAGTTCG	+
Preference number: 3 (lower is better) Translates to: CLQVTDGFGTSHPRLFKKAIYSI*GQGTSS Trigger: CGAACTTGTGCCCTGCCCCAATATACTGTAAATAGC...TTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGTTACCTGGAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	TGGTGCTCTGTGCTGGGTGATTCTGCTGTGAGTTTTTaGTTTTGCCTTTCAGTGTGGGTAGAAATAGAGACT	+
Preference number: 3 (lower is better) Translates to: WCSVLGDSAVSF*FCLSVWVEIET Trigger: AGTCTCTATTTCTACCCACACTGAAAGGCAAAACCAAAAACTCACAGCAGAATCACCCAGCACAGAGCACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	CTTTTTAAGAAAGCCTTGGGACTTCAGGAGAGTTCTTaGCTACCATGCCTACCAAACATATGCACACTTCCA	+
Preference number: 3 (lower is better) Translates to: LFKKALGLQESS*LPCLPNICTLP Trigger: TGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	CTCCTAGCCCCCAGTAGTAGATATGGGTTAGAGATATaGAAGAAACTTATTTTTCATCAGTGCTGGGACTTC	+
Preference number: 3 (lower is better) Translates to: LLAPSSRYGLEI*KKLIFHQCWDF Trigger: GAAGTCCCAGCACTGATGAAAAATAAGTTTCTTCCATATCTCTAACCCATATCTACTACTGGGGGCTAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR-3UTR CAA 90 bp	TTTAAGAAAGCCTTGGGACTTCAGGAGAGTTCTTGGCTACCATGCCTACCAAACCTTCCAAGAACCTTCTaGGGTTTTCTAAAATCAAAC	+
Preference number: 3 (lower is better) Translates to: FKKALGLQESSWLPCLPNLPRTF*GFLKSN Trigger: GTTTGATTTTAGAAAACCCAAGAAGGTTCTTGGAAG...GTTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CCA 72 bp	TTAGAGATATGGAAGAAACTTATTTTTCATCAGTGCTaGGACTTCTGTTGTCTCCCTAAGAAGACTCCGATA	+
Preference number: 3 (lower is better) Translates to: LEIWKKLIFHQC*DFCCLPKKTPI Trigger: TATCGGAGTCTTCTTAGGGAGACAACAGAAGTCCCAGCACTGATGAAAAATAAGTTTCTTCCATATCTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	CCAGACGGCGCTGGCACCTCGGCTCAGTTCTGCTGCTCGCCTCCAGTGCCCTTCCAGTGGCCTGGACGATaGCGGTGTACTGCTGGACTT	+
Preference number: 4 (lower is better) Translates to: PDGAGTSAQFCCSPPVPFQWPGR*RCTAGL Trigger: AAGTCCAGCAGTACACCGTCATCGTCCAGGCCACTG...GAAGGGCACTGGAGGCGAGCAGCAGAACTGAGCCGAGGTGCCAGCGCCGTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	CCAGACGGCGCTGGCACCTCGGCTCAGTTCTGCTGCTCGCCTCCAGTGCCCTTCGGATCAGTTTGTGGTTaGAGGGGAAGTAGGGGGCCT	+
Preference number: 4 (lower is better) Translates to: PDGAGTSAQFCCSPPVPFGSVCG*RGSRGP Trigger: AGGCCCCCTACTTCCCCTCCAACCACAAACTGATCC...GAAGGGCACTGGAGGCGAGCAGCAGAACTGAGCCGAGGTGCCAGCGCCGTCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	CCGATACTAAGGCCTCCCAAGCTATCAGCATTCCTCAGCCCCTTCCTCGGGGAGGGCGTTCCAGTTGGGTaGGTGGGGCTGGTCTCGGTC	+
Preference number: 4 (lower is better) Translates to: PILRPPKLSAFLSPFLGEGVPVG*VGLVSV Trigger: GACCGAGACCAGCCCCACTCACCCAACTGGAACGCC...CTCCCCGAGGAAGGGGCTGAGGAATGCTGATAGCTTGGGAGGCCTTAGTATCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TTTGGTGCTGGAAAGCCAGATCCTCACCTAACAGCCTTGGGGAGCCTAAAGGGCCCACGATGGCGCCCGTaGCCAGGCCAGCTGCAGCCA	+
Preference number: 4 (lower is better) Translates to: FGAGKPDPHLTALGSLKGPRWRP*PGQLQP Trigger: TGGCTGCAGCTGGCCTGGGCACGGGCGCCATCGTGG...GCCCTTTAGGCTCCCCAAGGCTGTTAGGTGAGGATCTGGCTTTCCAGCACCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	CACGTCAGACTCCGGTATCTTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCGTGCGGACACTGAAGTaGCCAGAGGGGTCCCCACTT	+
Preference number: 4 (lower is better) Translates to: HVRLRYLSRNNHGHAGCCVRTLK*PEGSPL Trigger: AAGTGGGGACCCCTCTGGGCACTTCAGTGTCCGCAC...GCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAAGATACCGGAGTCTGACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	CACGTCAGACTCCGGTATCTTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCTTGGGTGAGTGGGGCTaGTCTCGGTCCATCACCGTG	+
Preference number: 4 (lower is better) Translates to: HVRLRYLSRNNHGHAGCCLGEWG*SRSITV Trigger: CACGGTGATGGACCGAGACCAGCCCCACTCACCCAA...GCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAAGATACCGGAGTCTGACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	AAGGAGCCAAACCACAGCCTTGTACTGCACAGAGCTGGCCACTGGCCTAGCTTGCTGGCCAGGGGCGCCTaGTTGGACACCATTACGGTC	+
Preference number: 4 (lower is better) Translates to: KEPNHSLVLHRAGHWPSLLARGA*LDTITV Trigger: GACCGTAATGGTGTCCAACCAGGCGCCCCTGGCCAG...CAAGCTAGGCCAGTGGCCAGCTCTGTGCAGTACAAGGCTGTGGTTTGGCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 72 bp	TTTGGTGCTGGAAAGCCAGATCCTCACCTAACAGCCTaGGGGAGCCTAAAGGGCCCAGGAGACCCCGGCTGT	+
Preference number: 4 (lower is better) Translates to: FGAGKPDPHLTA*GSLKGPGDPGC Trigger: ACAGCCGGGGTCTCCTGGGCCCTTTAGGCTCCCCAAGGCTGTTAGGTGAGGATCTGGCTTTCCAGCACCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	CCGATACTAAGGCCTCCCAAGCTATCAGCATTCCTCAGCCCCTTCCTCGGGGAGCTGCCTTCACCACGGTaGCCATGCCCTCATTGGTCA	+
Preference number: 4 (lower is better) Translates to: PILRPPKLSAFLSPFLGELPSPR*PCPHWS Trigger: TGACCAATGAGGGCATGGTCACCGTGGTGAAGGCAG...CTCCCCGAGGAAGGGGCTGAGGAATGCTGATAGCTTGGGAGGCCTTAGTATCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TGCCCCATCCCAGGGCTCTCTTGGGCCCAGACATGTGGATGTCCTAGGTCTGTTTACCTCACGGCTTGCTaGATGAACCGGTCAGGGTCC	+
Preference number: 4 (lower is better) Translates to: CPIPGLSWAQTCGCPRSVYLTAC*MNRSGS Trigger: GGACCCTGACCGGTTCATGCAGCAAGCCGTGAGGTA...AACAGACCTAGGACATCCACATGTCTGGGCCCAAGAGAGCCCTGGGATGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	AAGATGCCCGGTCAGTGCCTGCCTTTCTGCCCCATCCCAGGGCTCTCTTGGGCCATGGTGAACATATTCTaGGATGGGCTCTGGGGTGTC	+
Preference number: 4 (lower is better) Translates to: KMPGQCLPFCPIPGLSWAMVNIF*DGLWGV Trigger: GACACCCCAGAGCCCATCCCAGAATATGTTCACCAT...GGCCCAAGAGAGCCCTGGGATGGGGCAGAAAGGCAGGCACTGACCGGGCATCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	AAGGAGCCAAACCACAGCCTTGTACTGCACAGAGCTGGCCACTGGCCTAGCTTGAGACGGCGTTCCAGTTaGGTGAGTGGGGCTGGTCTC	+
Preference number: 4 (lower is better) Translates to: KEPNHSLVLHRAGHWPSLRRRSS*VSGAGL Trigger: GAGACCAGCCCCACTCACCCAACTGGAACGCCGTCT...CAAGCTAGGCCAGTGGCCAGCTCTGTGCAGTACAAGGCTGTGGTTTGGCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TGCCCCATCCCAGGGCTCTCTTGGGCCCAGACATGTGGATGTCCTAGGTCTGTTAATGTCTCCTGGGTGTaGCACCACAGGCCTGACTGG	+
Preference number: 4 (lower is better) Translates to: CPIPGLSWAQTCGCPRSVNVSWV*HHRPDW Trigger: CCAGTCAGGCCTGTGGTGCCACACCCAGGAGACATT...AACAGACCTAGGACATCCACATGTCTGGGCCCAAGAGAGCCCTGGGATGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTGTGTCATTTGGCGGCTaGGAGGGGTCTAGGGCCACT	+
Preference number: 4 (lower is better) Translates to: YCPGPKQKGTLVVLGATAVSFGG*EGSRAT Trigger: AGTGGCCCTAGACCCCTCTCAGCCGCCAAATGACAC...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTGGTCCATGGGCCGAGTaGCATACATCCGGCCAGACA	+
Preference number: 4 (lower is better) Translates to: YCPGPKQKGTLVVLGATAGPWAE*HTSGQT Trigger: TGTCTGGCCGGATGTATGTCACTCGGCCCATGGACC...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTGGATCACGATGCAGATaGGGATCGCCACGATGGCGC	+
Preference number: 4 (lower is better) Translates to: YCPGPKQKGTLVVLGATAGSRCR*GSPRWR Trigger: GCGCCATCGTGGCGATCCTCATCTGCATCGTGATCC...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	CGAGCAATTTGCATAGGACAGCCCTCCCAACCCTTTCATGAGCTCTGCTGCCCTCATCCTCAGGGTCGATaGGCAGCTGCTTTGTGTGCC	+
Preference number: 4 (lower is better) Translates to: RAICIGQPSQPFHELCCPHPQGR*AAALCA Trigger: GGCACACAAAGCAGCTGCTCATCGACCCTGAGGATG...AGGGCAGCAGAGCTCATGAAAGGGTTGGGAGGGCTGTCCTATGCAAATTGCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	CCGATACTAAGGCCTCCCAAGCTATCAGCATTCCTCAGCCCCTTCCTCGGGGAGACGGTAAAGGCCACCTaGTCTGAGGGGATCTTCAAC	+
Preference number: 4 (lower is better) Translates to: PILRPPKLSAFLSPFLGETVKAT*SEGIFN Trigger: GTTGAAGATCCCCTCAGAGCAGGTGGCCTTTACCGT...CTCCCCGAGGAAGGGGCTGAGGAATGCTGATAGCTTGGGAGGCCTTAGTATCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	CACGTCAGACTCCGGTATCTTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCGCGGCTGTGGTGATCTaGCCATTGGATGTGTTGATG	+
Preference number: 4 (lower is better) Translates to: HVRLRYLSRNNHGHAGCCAAVVI*PLDVLM Trigger: CATCAACACATCCAATGGGCAGATCACCACAGCCGC...GCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAAGATACCGGAGTCTGACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TGCCCCATCCCAGGGCTCTCTTGGGCCCAGACATGTGGATGTCCTAGGTCTGTTGCACACCAGGAGTTTTaGTCAGCACATGCTCCATGG	+
Preference number: 4 (lower is better) Translates to: CPIPGLSWAQTCGCPRSVAHQEF*SAHAPW Trigger: CCATGGAGCATGTGCTGAGCAAAACTCCTGGTGTGC...AACAGACCTAGGACATCCACATGTCTGGGCCCAAGAGAGCCCTGGGATGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TTTGGTGCTGGAAAGCCAGATCCTCACCTAACAGCCTTGGGGAGCCTAAAGGGCTTCCAGTTGGGTGAGTaGGGCTGGTCTCGGTCCATC	+
Preference number: 4 (lower is better) Translates to: FGAGKPDPHLTALGSLKGFQLGE*GWSRSI Trigger: GATGGACCGAGACCAGCCCCACTCACCCAACTGGAA...GCCCTTTAGGCTCCCCAAGGCTGTTAGGTGAGGATCTGGCTTTCCAGCACCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	ACTGAAGTGATCACCCTGCCCAGTTTGCCCTGTGTCAAGCTGTCAAGCTGCCATCCAGGGGCGCCTGGTTaGACACCATTACGGTCAGCA	+
Preference number: 4 (lower is better) Translates to: TEVITLPSLPCVKLSSCHPGAPG*TPLRSA Trigger: TGCTGACCGTAATGGTGTCCAACCAGGCGCCCCTGG...ATGGCAGCTTGACAGCTTGACACAGGGCAAACTGGGCAGGGTGATCACTTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTGACTGGAAGGACATCTaGATCCCACTGGCCAGGGGC	+
Preference number: 4 (lower is better) Translates to: YCPGPKQKGTLVVLGATADWKDI*IPLARG Trigger: GCCCCTGGCCAGTGGGATCCAGATGTCCTTCCAGTC...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 72 bp	CCAGGCATCGCGCCTGCTCCAGCTATTTACAGTATATaGGGGCAGGGCACAAGTTCGGGTGAAAGCCGAGTC	+
Preference number: 4 (lower is better) Translates to: PGIAPAPAIYSI*GQGTSSGESRV Trigger: GACTCGGCTTTCACCCGAACTTGTGCCCTGCCCCAATATACTGTAAATAGCTGGAGCAGGCGCGATGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	CGAGCAATTTGCATAGGACAGCCCTCCCAACCCTTTCATGAGCTCTGCTGCCCTAAAGGCCACCTGCTCTaGGGGGATCTTCAACTCCCT	+
Preference number: 4 (lower is better) Translates to: RAICIGQPSQPFHELCCPKGHLL*GDLQLP Trigger: AGGGAGTTGAAGATCCCCTCAGAGCAGGTGGCCTTT...AGGGCAGCAGAGCTCATGAAAGGGTTGGGAGGGCTGTCCTATGCAAATTGCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	TTTGGTGCTGGAAAGCCAGATCCTCACCTAACAGCCTTGGGGAGCCTAAAGGGCGTGTTCAGAGTGTGCTaGCGATGTCTGGGCTACCAG	+
Preference number: 4 (lower is better) Translates to: FGAGKPDPHLTALGSLKGVFRVC*RCLGYQ Trigger: CTGGTAGCCCAGACATCGTCAGCACACTCTGAACAC...GCCCTTTAGGCTCCCCAAGGCTGTTAGGTGAGGATCTGGCTTTCCAGCACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	GTGTGGCAGAGCCTGCTAGGTATGTGGTCTATGTACTACCACACCTGGTGCTCTCTGCAGAAAAAGTGGTaGGTGCTGTCCCAGCGGGCA	+
Preference number: 4 (lower is better) Translates to: VWQSLLGMWSMYYHTWCSLQKKW*VLSQRA Trigger: TGCCCGCTGGGACAGCACTCACCACTTTTTCTGCAG...AGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	GTGTGGCAGAGCCTGCTAGGTATGTGGTCTATGTACTACCACACCTGGTGCTCTGCTGTTGCAGCTGGCTaGGGTCGTAGTCTTGGTCCT	+
Preference number: 4 (lower is better) Translates to: VWQSLLGMWSMYYHTWCSAVAAG*GRSLGP Trigger: AGGACCAAGACTACGACCTCAGCCAGCTGCAACAGC...AGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	CCTGGACACGACAATTCCGCAAAGCTGCTGTTCCCTTCGGAACCAAGACTGCCTACCATAGCAGCCCATTaGTCAGCACTCTGGCGTTCC	+
Preference number: 4 (lower is better) Translates to: PGHDNSAKLLFPSEPRLPTIAAH*SALWRS Trigger: GGAACGCCAGAGTGCTGAGCAATGGGCTGCTATGGT...AGGCAGTCTTGGTTCCGAAGGGAACAGCAGCTTTGCGGAATTGTCGTGTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	AAGGAGCCAAACCACAGCCTTGTACTGCACAGAGCTGGCCACTGGCCTAGCTTGCAGCTCATAGTCCACTaGCTTCACCACGGTGACCAT	+
Preference number: 4 (lower is better) Translates to: KEPNHSLVLHRAGHWPSLQLIVH*LHHGDH Trigger: ATGGTCACCGTGGTGAAGGCAGTGGACTATGAGCTG...CAAGCTAGGCCAGTGGCCAGCTCTGTGCAGTACAAGGCTGTGGTTTGGCTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTGAGTACCTCACGGCTTaGTGCATGAACCGGTCAGGG	+
Preference number: 4 (lower is better) Translates to: YCPGPKQKGTLVVLGATAEYLTA*CMNRSG Trigger: CCCTGACCGGTTCATGCAGCAAGCCGTGAGGTACTC...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	CCGATACTAAGGCCTCCCAAGCTATCAGCATTCCTCAGCCCCTTCCTCGGGGAGCATCACATATGTACCTaGCTTGGAGCCCTCATCCAC	+
Preference number: 4 (lower is better) Translates to: PILRPPKLSAFLSPFLGEHHICT*LGALIH Trigger: GTGGATGAGGGCTCCAAGCCAGGTACATATGTGATG...CTCCCCGAGGAAGGGGCTGAGGAATGCTGATAGCTTGGGAGGCCTTAGTATCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTGTCTCCAATGTCTCCTaGGTGTGGCACCACAGGCCT	+
Preference number: 4 (lower is better) Translates to: YCPGPKQKGTLVVLGATAVSNVS*VWHHRP Trigger: AGGCCTGTGGTGCCACACCCAGGAGACATTGGAGAC...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 72 bp	CAGTGGCCATGCCAAGCTCAGCACCACCCGAATTGTTaGCCGATTCGAGCAATTTGCATAGGACAGCCCTCC	+
Preference number: 4 (lower is better) Translates to: QWPCQAQHHPNC*PIRAICIGQPS Trigger: GGAGGGCTGTCCTATGCAAATTGCTCGAATCGGCAAACAATTCGGGTGGTGCTGAGCTTGGCATGGCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	ACTGAAGTGATCACCCTGCCCAGTTTGCCCTGTGTCAAGCTGTCAAGCTGCCATCTCGGTCCATCACCGTaGGGTTGGCTACTACTGTCT	+
Preference number: 4 (lower is better) Translates to: TEVITLPSLPCVKLSSCHLGPSP*GWLLLS Trigger: AGACAGTAGTAGCCAACCTCACGGTGATGGACCGAG...ATGGCAGCTTGACAGCTTGACACAGGGCAAACTGGGCAGGGTGATCACTTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	TCTTGGCTACCATGCCTACCAAACATATGCACACTTCCAAGAACCTTCTTGGGTGGTCTGTGCGGACACTaGAGTGCCCAGAGGGGTCCC	+
Preference number: 4 (lower is better) Translates to: SWLPCLPNICTLPRTFLGGLCGH*SAQRGP Trigger: GGGACCCCTCTGGGCACTTCAGTGTCCGCACAGACC...ACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	GCTTGGCTAATGCTAACTTGTTGGCCTGGGAACAGAGTTCCAAGATGGGTCTGGGCCCATTGGATGTGTTaGTGTGCAGCCAGTTGGCGG	+
Preference number: 4 (lower is better) Translates to: AWLMLTCWPGNRVPRWVWAHWMC*CAASWR Trigger: CCGCCAACTGGCTGCACATCAACACATCCAATGGGC...CCAGACCCATCTTGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGCCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TTTGGTGCTGGAAAGCCAGATCCTCACCTAACAGCCTTGGGGAGCCTAAAGGGCAGCAGCTGCTTTGTGTaGCTCTCCTTTTCTCTCCGC	+
Preference number: 4 (lower is better) Translates to: FGAGKPDPHLTALGSLKGSSCFV*LSFSLR Trigger: GCGGAGAGAAAAGGAGAGGCACACAAAGCAGCTGCT...GCCCTTTAGGCTCCCCAAGGCTGTTAGGTGAGGATCTGGCTTTCCAGCACCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TGCCTCCAGGTAACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAGTAAGATCCTCACGGTaGGCCCGGAGCGCGCCCGAG	+
Preference number: 4 (lower is better) Translates to: CLQVTDGFGTSHPRLFKKVRSSR*ARSAPE Trigger: CTCGGGCGCGCTCCGGGCCCACCGTGAGGATCTTAC...TTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGTTACCTGGAGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	GTGTGGCAGAGCCTGCTAGGTATGTGGTCTATGTACTACCACACCTGGTGCTCTACCCCTGCTGTGGACTaGAAGGACATCTGGATCCCA	+
Preference number: 4 (lower is better) Translates to: VWQSLLGMWSMYYHTWCSTPAVD*KDIWIP Trigger: TGGGATCCAGATGTCCTTCCAGTCCACAGCAGGGGT...AGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	GCTTGGCTAATGCTAACTTGTTGGCCTGGGAACAGAGTTCCAAGATGGGTCTGGCATAGGGGCCAATGTTaGGGTCCATATCGGCGTCGG	+
Preference number: 4 (lower is better) Translates to: AWLMLTCWPGNRVPRWVWHRGQC*GPYRRR Trigger: CCGACGCCGATATGGACCCCAACATTGGCCCCTATG...CCAGACCCATCTTGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 72 bp	ACACCAGTGGCCATGCCAAGCTCAGCACCACCCGAATaGTTTGCCGATTCGAGCAATTTGCATAGGACAGCC	+
Preference number: 4 (lower is better) Translates to: TPVAMPSSAPPE*FADSSNLHRTA Trigger: GGCTGTCCTATGCAAATTGCTCGAATCGGCAAACAATTCGGGTGGTGCTGAGCTTGGCATGGCCACTGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	TTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCACATTTGTCCATTTTCAAATCACGGCTTGCTGCATaGACCGGTCAGGGTCCACTG	+
Preference number: 4 (lower is better) Translates to: FPETTTVMRAAAHLSIFKSRLAA*TGQGPL Trigger: CAGTGGACCCTGACCGGTTCATGCAGCAAGCCGTGA...TTTGAAAATGGACAAATGTGCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	CGAGCAATTTGCATAGGACAGCCCTCCCAACCCTTTCATGAGCTCTGCTGCCCTCGAACAGCAGAACCATaGTTAGCAGGATCACGATGC	+
Preference number: 4 (lower is better) Translates to: RAICIGQPSQPFHELCCPRTAEP*LAGSRC Trigger: GCATCGTGATCCTGCTAATCATGGTTCTGCTGTTCG...AGGGCAGCAGAGCTCATGAAAGGGTTGGGAGGGCTGTCCTATGCAAATTGCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	AAGGAGCCAAACCACAGCCTTGTACTGCACAGAGCTGGCCACTGGCCTAGCTTGGCCGTTCTCATCACATaGGCACACCTTGACCTTTAT	+
Preference number: 4 (lower is better) Translates to: KEPNHSLVLHRAGHWPSLAVLIT*AHLDLY Trigger: ATAAAGGTCAAGGTGTGCCCATGTGATGAGAACGGC...CAAGCTAGGCCAGTGGCCAGCTCTGTGCAGTACAAGGCTGTGGTTTGGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 72 bp	ACAACATACTGTCCTGGACCAAAGCAAAAAGGGACCTaGGTGGTATTGGGGGCGACAGCTGGTCCAGAGAGA	+
Preference number: 4 (lower is better) Translates to: TTYCPGPKQKGT*VVLGATAGPER Trigger: TCTCTCTGGACCAGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTATGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 72 bp	TGCTATGCCTTCAACAGGATCCCTCAGGGTCTCATCTaGAAGAGTGGAGGGCTGAGCCAAGGTTTTGCAGGA	+
Preference number: 4 (lower is better) Translates to: CYAFNRIPQGLI*KSGGLSQGFAG Trigger: TCCTGCAAAACCTTGGCTCAGCCCTCCACTCTTCAAGATGAGACCCTGAGGGATCCTGTTGAAGGCATAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	CATCTCAACAGACCACATACTCACTATGGGGAAACTGAGGCATCTCTGAGGGCCGGGTCGATGAGCAGCTaGTTTGTGTGCCTCTCCTTT	+
Preference number: 4 (lower is better) Translates to: HLNRPHTHYGETEASLRAGSMSS*FVCLSF Trigger: AAAGGAGAGGCACACAAAGCAGCTGCTCATCGACCC...GGCCCTCAGAGATGCCTCAGTTTCCCCATAGTGAGTATGTGGTCTGTTGAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	GCTTGGCTAATGCTAACTTGTTGGCCTGGGAACAGAGTTCCAAGATGGGTCTGGTGGTTACCCCTGCTGTaGACTGGAAGGACATCTGGA	+
Preference number: 4 (lower is better) Translates to: AWLMLTCWPGNRVPRWVWWLPLL*TGRTSG Trigger: TCCAGATGTCCTTCCAGTCCACAGCAGGGGTAACCA...CCAGACCCATCTTGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGCCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TTTGGTGCTGGAAAGCCAGATCCTCACCTAACAGCCTTGGGGAGCCTAAAGGGCCAGCAGCCAGGAAGGTaGCCTCATATACATTGTTCT	+
Preference number: 4 (lower is better) Translates to: FGAGKPDPHLTALGSLKGQQPGR*PHIHCS Trigger: AGAACAATGTATATGAGGCCACCTTCCTGGCTGCTG...GCCCTTTAGGCTCCCCAAGGCTGTTAGGTGAGGATCTGGCTTTCCAGCACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTGACGTCATACACCCCTaGTTCCAGATACAGGATTCT	+
Preference number: 4 (lower is better) Translates to: YCPGPKQKGTLVVLGATADVIHP*FQIQDS Trigger: AGAATCCTGTATCTGGAAGCAGGGGTGTATGACGTC...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCACATTTGTCCATTTTCAAAGGGAACGTTGATGGGTaGGATGACCCAGTCACGCTT	+
Preference number: 4 (lower is better) Translates to: FPETTTVMRAAAHLSIFKGNVDG*DDPVTL Trigger: AAGCGTGACTGGGTCATCCCACCCATCAACGTTCCC...TTTGAAAATGGACAAATGTGCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	TTTAAGAAAGCCTTGGGACTTCAGGAGAGTTCTTGGCTACCATGCCTACCAAACCATCCGCCCCGACTTTaGAGTCCAAGCTGTTGGTCT	+
Preference number: 4 (lower is better) Translates to: FKKALGLQESSWLPCLPNHPPRL*SPSCWS Trigger: AGACCAACAGCTTGGACTTCAAAGTCGGGGCGGATG...GTTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TCTTGGCTACCATGCCTACCAAACATATGCACACTTCCAAGAACCTTCTTGGGTCCGGTCAGGGTCCACTaGAGAAAAAGTGGTGAGTGC	+
Preference number: 4 (lower is better) Translates to: SWLPCLPNICTLPRTFLGPVRVH*RKSGEC Trigger: GCACTCACCACTTTTTCTGCAGTGGACCCTGACCGG...ACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TCTTGGCTACCATGCCTACCAAACATATGCACACTTCCAAGAACCTTCTTGGGTGGGCTCTGGGGTGTCTaGGTGACAATTCTGTACCTC	+
Preference number: 4 (lower is better) Translates to: SWLPCLPNICTLPRTFLGGLWGV*VTILYL Trigger: GAGGTACAGAATTGTCACCCAGACACCCCAGAGCCC...ACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TCTTGGCTACCATGCCTACCAAACATATGCACACTTCCAAGAACCTTCTTGGGTATGCTCCATGGCTTCTaGCTGTTGCAGCTGGCTGAG	+
Preference number: 4 (lower is better) Translates to: SWLPCLPNICTLPRTFLGMLHGF*LLQLAE Trigger: CTCAGCCAGCTGCAACAGCCAGAAGCCATGGAGCAT...ACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 72 bp	TTGACACTGACTGTATGCTTGGCTAATGCTAACTTGTaGGCCTGGGAACAGAGTTCCAAGATGGGTCTGGGG	+
Preference number: 4 (lower is better) Translates to: LTLTVCLANANL*AWEQSSKMGLG Trigger: CCCCAGACCCATCTTGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGCCAAGCATACAGTCAGTGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR TCA 90 bp	ACTGAAGTGATCACCCTGCCCAGTTTGCCCTGTGTCAAGCTGTCAAGCTGCCATTGTCGTTCATGTCAATaGCGTAGATGTACAGGTCAA	+
Preference number: 4 (lower is better) Translates to: TEVITLPSLPCVKLSSCHCRSCQ*RRCTGQ Trigger: TTGACCTGTACATCTACGTCATTGACATGAACGACA...ATGGCAGCTTGACAGCTTGACACAGGGCAAACTGGGCAGGGTGATCACTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TCTTGGCTACCATGCCTACCAAACATATGCACACTTCCAAGAACCTTCTTGGGTTTCTGGGATGGGCTCTaGGGTGTCTGGGTGACAATT	+
Preference number: 4 (lower is better) Translates to: SWLPCLPNICTLPRTFLGFWDGL*GVWVTI Trigger: AATTGTCACCCAGACACCCCAGAGCCCATCCCAGAA...ACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TTTAAGAAAGCCTTGGGACTTCAGGAGAGTTCTTGGCTACCATGCCTACCAAACTCAGCACATGCTCCATaGCTTCTGGCTGTTGCAGCT	+
Preference number: 4 (lower is better) Translates to: FKKALGLQESSWLPCLPNSAHAP*LLAVAA Trigger: AGCTGCAACAGCCAGAAGCCATGGAGCATGTGCTGA...GTTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CCA 90 bp	TGCCTCCAGGTAACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAGAACATATTCTGGGATaGGCTCTGGGGTGTCTGGGT	+
Preference number: 4 (lower is better) Translates to: CLQVTDGFGTSHPRLFKKEHILG*ALGCLG Trigger: ACCCAGACACCCCAGAGCCCATCCCAGAATATGTTC...TTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGTTACCTGGAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TGCCTCCAGGTAACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAATGCCATTGGCTGTGGTaGTATCATCTGCATCGTTGG	+
Preference number: 4 (lower is better) Translates to: CLQVTDGFGTSHPRLFKKCHWLW*YHLHRW Trigger: CCAACGATGCAGATGATAGCACCACAGCCAATGGCA...TTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGTTACCTGGAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TTTAAGAAAGCCTTGGGACTTCAGGAGAGTTCTTGGCTACCATGCCTACCAAACTTCTGTACCTCACCATaGCATTGGCTGTGGTGCTAT	+
Preference number: 4 (lower is better) Translates to: FKKALGLQESSWLPCLPNFCTSP*HWLWCY Trigger: ATAGCACCACAGCCAATGGCATGGTGAGGTACAGAA...GTTTGGTAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TCTTGGCTACCATGCCTACCAAACATATGCACACTTCCAAGAACCTTCTTGGGTCTCAGGAACCTCTCCTaGAAATGTGCTTGTGGTGAA	+
Preference number: 4 (lower is better) Translates to: SWLPCLPNICTLPRTFLGLRNLS*KCACGE Trigger: TTCACCACAAGCACATTTGCAGGAGAGGTTCCTGAG...ACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR GCA 90 bp	TGCCTCCAGGTAACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAGTTTTGCTCAGCACATaGTCCATGGCTTCTGGCTGT	+
Preference number: 4 (lower is better) Translates to: CLQVTDGFGTSHPRLFKKVLLST*SMASGC Trigger: ACAGCCAGAAGCCATGGAGCATGTGCTGAGCAAAAC...TTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGTTACCTGGAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 72 bp	TTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAGCCTaGGGACTTCAGGAGAGTTCTTGGCTACCATGCCTA	+
Preference number: 4 (lower is better) Translates to: FGTSHPRLFKKA*GLQESSWLPCL Trigger: TAGGCATGGTAGCCAAGAACTCTCCTGAAGTCCCAAGGCTTTCTTAAAAAGCCTGGGATGAGAGGTACCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
3UTR CAA 72 bp	CATTTGACACTGACTGTATGCTTGGCTAATGCTAACTaGTTGGCCTGGGAACAGAGTTCCAAGATGGGTCTG	+
Preference number: 4 (lower is better) Translates to: HLTLTVCLANAN*LAWEQSSKMGL Trigger: CAGACCCATCTTGGAACTCTGTTCCCAGGCCAACAAGTTAGCATTAGCCAAGCATACAGTCAGTGTCAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 90 bp	GAGGATCGCCACGATGGCGCCCGTGCCCAGGCCAGCTGCAGCCACTaGGCCGACCGTGGTACAGTCGCCGTTCTCATCACATGGGCACAC	+
Preference number: 5 (lower is better) Translates to: EDRHDGARAQASCSH*ADRGTVAVLITWAH Trigger: GTGTGCCCATGTGATGAGAACGGCGACTGTACCACGGTCGGCGCAGTGGCTGCAGCTGGCCTGGGCACGGGCGCCATCGTGGCGATCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 90 bp	GATGCAGATGAGGATCGCCACGATGGCGCCCGTGCCCAGGCCAGCTaGAGCCACTGCGCCGACCGTGGTACAGTCGCCGTTCTCATCACA	+
Preference number: 5 (lower is better) Translates to: DADEDRHDGARAQAS*SHCADRGTVAVLIT Trigger: TGTGATGAGAACGGCGACTGTACCACGGTCGGCGCAGTGGCTGCAGCTGGCCTGGGCACGGGCGCCATCGTGGCGATCCTCATCTGCATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	CCAGACGGCGCTGGCACCTCGGCTCAGTTCTGCTGCTCGCCTCCAGTGCCCTTCTCGGCTGCAGTGATGTaGATGGCATTGAGGCCGGGC	+
Preference number: 5 (lower is better) Translates to: PDGAGTSAQFCCSPPVPFSAAVM*MALRPG Trigger: GCCCGGCCTCAATGCCATCAACATCACTGCAGCCGA...GAAGGGCACTGGAGGCGAGCAGCAGAACTGAGCCGAGGTGCCAGCGCCGTCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 90 bp	TGGGCTACCAGCAGCCGCACCATAGCAGCCCATTGCTCAGCACTCTaGCGTTCCCGCGCAGTGACGGTAAAGGCCACCTGCTCTGAGGGG	+
Preference number: 5 (lower is better) Translates to: WATSSRTIAAHCSAL*RSRAVTVKATCSEG Trigger: CCCCTCAGAGCAGGTGGCCTTTACCGTCACTGCGCGGGAACGCCAGAGTGCTGAGCAATGGGCTGCTATGGTGCGGCTGCTGGTAGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CCA 90 bp	ACTGGGCAGCAGTGCTGTACGTTACAGTCCCAGACCCATGTCCCGTaGAGTGCGTGGGGTCCCCAGGAAGCCTCACCTGGCTTGGAGCCC	+
Preference number: 5 (lower is better) Translates to: TGQQCCTLQSQTHVP*SAWGPQEASPGLEP Trigger: GGGCTCCAAGCCAGGTGAGGCTTCCTGGGGACCCCACGCACTCCACGGGACATGGGTCTGGGACTGTAACGTACAGCACTGCTGCCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108911.2
CDS CCA 90 bp	TCTCCAATGTCTCCTGGGTGTGGCACCACAGGCCTGACTGGGTACTaGGGTTCAGCACCTACTGGCCGTTCATCCACCCGCCGCACACCA	+
Preference number: 5 (lower is better) Translates to: SPMSPGCGTTGLTGY*GSAPTGRSSTRRTP Trigger: TGGTGTGCGGCGGGTGGATGAACGGCCAGTAGGTGCTGAACCCCAGTACCCAGTCAGGCCTGTGGTGCCACACCCAGGAGACATTGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 90 bp	CAGTGCTGTACGTTACAGTCCCAGACCCATGTCCCGTGGAGTGCGTaGGGTCCCCAGGAAGCCTCACCTGGCTTGGAGCCCTCATCCACA	+
Preference number: 5 (lower is better) Translates to: QCCTLQSQTHVPWSA*GPQEASPGLEPSST Trigger: TGTGGATGAGGGCTCCAAGCCAGGTGAGGCTTCCTGGGGACCCCACGCACTCCACGGGACATGGGTCTGGGACTGTAACGTACAGCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108911.2
CDS-3UTR CAA 90 bp	AAGATGCCCGGTCAGTGCCTGCCTTTCTGCCCCATCCCAGGGCTCTCTTGGGCCCCATCCGCCCCGACTTaGAAGTCCAAGCTGTTGGTC	+
Preference number: 5 (lower is better) Translates to: KMPGQCLPFCPIPGLSWAPSAPT*KSKLLV Trigger: GACCAACAGCTTGGACTTCAAAGTCGGGGCGGATGG...GGCCCAAGAGAGCCCTGGGATGGGGCAGAAAGGCAGGCACTGACCGGGCATCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	CACGTCAGACTCCGGTATCTTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCGCCAGGGGCGCCTGGTaGGACACCATTACGGTCAGC	+
Preference number: 5 (lower is better) Translates to: HVRLRYLSRNNHGHAGCCARGAW*DTITVS Trigger: GCTGACCGTAATGGTGTCCAACCAGGCGCCCCTGGC...GCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAAGATACCGGAGTCTGACGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS TCA 90 bp	AGCACTCTGGCGTTCCCGCGCAGTGACGGTAAAGGCCACCTGCTCTaGGGGGATCTTCAACTCCCTAGTGGCGAAGACTGTCCCATCCGC	+
Preference number: 5 (lower is better) Translates to: STLAFPRSDGKGHLL*GDLQLPSGEDCPIR Trigger: GCGGATGGGACAGTCTTCGCCACTAGGGAGTTGAAGATCCCCTCAGAGCAGGTGGCCTTTACCGTCACTGCGCGGGAACGCCAGAGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CCA 90 bp	GCCTCGTTGACATCGGTGACAGAGATGGTTACCCCTGCTGTGGACTaGAAGGACATCTGGATCCCACTGGCCAGGGGCGCCTGGTTGGAC	+
Preference number: 5 (lower is better) Translates to: ASLTSVTEMVTPAVD*KDIWIPLARGAWLD Trigger: GTCCAACCAGGCGCCCCTGGCCAGTGGGATCCAGATGTCCTTCCAGTCCACAGCAGGGGTAACCATCTCTGTCACCGATGTCAACGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 90 bp	CCGCCGCACACCAGGAGTTTTGCTCAGCACATGCTCCATGGCTTCTaGCTGTTGCAGCTGGCTGAGGTCGTAGTCTTGGTCCTCCTCGCC	+
Preference number: 5 (lower is better) Translates to: PPHTRSFAQHMLHGF*LLQLAEVVVLVLLA Trigger: GGCGAGGAGGACCAAGACTACGACCTCAGCCAGCTGCAACAGCCAGAAGCCATGGAGCATGTGCTGAGCAAAACTCCTGGTGTGCGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 90 bp	TGCTCAGCACTCTGGCGTTCCCGCGCAGTGACGGTAAAGGCCACCTaGTCTGAGGGGATCTTCAACTCCCTAGTGGCGAAGACTGTCCCA	+
Preference number: 5 (lower is better) Translates to: CSALWRSRAVTVKAT*SEGIFNSLVAKTVP Trigger: TGGGACAGTCTTCGCCACTAGGGAGTTGAAGATCCCCTCAGAGCAGGTGGCCTTTACCGTCACTGCGCGGGAACGCCAGAGTGCTGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CCA 90 bp	TCGGTGACAGAGATGGTTACCCCTGCTGTGGACTGGAAGGACATCTaGATCCCACTGGCCAGGGGCGCCTGGTTGGACACCATTACGGTC	+
Preference number: 5 (lower is better) Translates to: SVTEMVTPAVDWKDI*IPLARGAWLDTITV Trigger: GACCGTAATGGTGTCCAACCAGGCGCCCCTGGCCAGTGGGATCCAGATGTCCTTCCAGTCCACAGCAGGGGTAACCATCTCTGTCACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 90 bp	AATGAAGTCTCCAATGTCTCCTGGGTGTGGCACCACAGGCCTGACTaGGTACTGGGGTTCAGCACCTACTGGCCGTTCATCCACCCGCCG	+
Preference number: 5 (lower is better) Translates to: NEVSNVSWVWHHRPD*VLGFSTYWPFIHPP Trigger: CGGCGGGTGGATGAACGGCCAGTAGGTGCTGAACCCCAGTACCCAGTCAGGCCTGTGGTGCCACACCCAGGAGACATTGGAGACTTCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 90 bp	TTGCTGCATGAACCGGTCAGGGTCCACTGCAGAAAAAGTGGTGAGTaGTGTCCCAGCGGGCACACCCTCTTCCAGGCGGATCAGTTTGTG	+
Preference number: 5 (lower is better) Translates to: LLHEPVRVHCRKSGE*CPSGHTLFQADQFV Trigger: CACAAACTGATCCGCCTGGAAGAGGGTGTGCCCGCTGGGACAGCACTCACCACTTTTTCTGCAGTGGACCCTGACCGGTTCATGCAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 90 bp	TTTGGAGTACCTCACGGCTTGCTGCATGAACCGGTCAGGGTCCACTaGAGAAAAAGTGGTGAGTGCTGTCCCAGCGGGCACACCCTCTTC	+
Preference number: 5 (lower is better) Translates to: FGVPHGLLHEPVRVH*RKSGECCPSGHTLF Trigger: GAAGAGGGTGTGCCCGCTGGGACAGCACTCACCACTTTTTCTGCAGTGGACCCTGACCGGTTCATGCAGCAAGCCGTGAGGTACTCCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 90 bp	GCCACTGTCTGCCCTTTCTTGTGTTCAGAGTGTGCTGACGATGTCTaGGCTACCAGCAGCCGCACCATAGCAGCCCATTGCTCAGCACTC	+
Preference number: 5 (lower is better) Translates to: ATVCPFLCSECADDV*ATSSRTIAAHCSAL Trigger: GAGTGCTGAGCAATGGGCTGCTATGGTGCGGCTGCTGGTAGCCCAGACATCGTCAGCACACTCTGAACACAAGAAAGGGCAGACAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS-3UTR CAA 90 bp	AAGATGCCCGGTCAGTGCCTGCCTTTCTGCCCCATCCCAGGGCTCTCTTGGGCCCTGCTGAACTCGACTTaGAGTAGTTTCTCTCCTTCC	+
Preference number: 5 (lower is better) Translates to: KMPGQCLPFCPIPGLSWALLNST*SSFSPS Trigger: GGAAGGAGAGAAACTACTCAAAGTCGAGTTCAGCAG...GGCCCAAGAGAGCCCTGGGATGGGGCAGAAAGGCAGGCACTGACCGGGCATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	CCTGGACACGACAATTCCGCAAAGCTGCTGTTCCCTTCGGAACCAAGACTGCCTGGAGTACCTCACGGCTaGCTGCATGAACCGGTCAGG	+
Preference number: 5 (lower is better) Translates to: PGHDNSAKLLFPSEPRLPGVPHG*LHEPVR Trigger: CCTGACCGGTTCATGCAGCAAGCCGTGAGGTACTCC...AGGCAGTCTTGGTTCCGAAGGGAACAGCAGCTTTGCGGAATTGTCGTGTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	TGCCCCATCCCAGGGCTCTCTTGGGCCCAGACATGTGGATGTCCTAGGTCTGTTCGGATGGGGATGTCATaGTCTTTGTCCGACCTGATC	+
Preference number: 5 (lower is better) Translates to: CPIPGLSWAQTCGCPRSVRMGMS*SLSDLI Trigger: GATCAGGTCGGACAAAGACAATGACATCCCCATCCG...AACAGACCTAGGACATCCACATGTCTGGGCCCAAGAGAGCCCTGGGATGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	TTTGGTGCTGGAAAGCCAGATCCTCACCTAACAGCCTTGGGGAGCCTAAAGGGCCATGGCTTCTGGCTGTaGCAGCTGGCTGAGGTCGTA	+
Preference number: 5 (lower is better) Translates to: FGAGKPDPHLTALGSLKGHGFWL*QLAEVV Trigger: TACGACCTCAGCCAGCTGCAACAGCCAGAAGCCATG...GCCCTTTAGGCTCCCCAAGGCTGTTAGGTGAGGATCTGGCTTTCCAGCACCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 90 bp	AGCCAGTTGGCGGGATCAGACAGTTTGGAGTACCTCACGGCTTGCTaGATGAACCGGTCAGGGTCCACTGCAGAAAAAGTGGTGAGTGCT	+
Preference number: 5 (lower is better) Translates to: SQLAGSDSLEYLTAC*MNRSGSTAEKVVSA Trigger: AGCACTCACCACTTTTTCTGCAGTGGACCCTGACCGGTTCATGCAGCAAGCCGTGAGGTACTCCAAACTGTCTGATCCCGCCAACTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 90 bp	TGCAGCCAGTTGGCGGGATCAGACAGTTTGGAGTACCTCACGGCTTaGTGCATGAACCGGTCAGGGTCCACTGCAGAAAAAGTGGTGAGT	+
Preference number: 5 (lower is better) Translates to: CSQLAGSDSLEYLTA*CMNRSGSTAEKVVS Trigger: ACTCACCACTTTTTCTGCAGTGGACCCTGACCGGTTCATGCAGCAAGCCGTGAGGTACTCCAAACTGTCTGATCCCGCCAACTGGCTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 90 bp	TCCAGAATGGCGGCTGTGGTGATCTGCCCATTGGATGTGTTGATGTaGAGCCAGTTGGCGGGATCAGACAGTTTGGAGTACCTCACGGCT	+
Preference number: 5 (lower is better) Translates to: SRMAAVVICPLDVLM*SQLAGSDSLEYLTA Trigger: AGCCGTGAGGTACTCCAAACTGTCTGATCCCGCCAACTGGCTGCACATCAACACATCCAATGGGCAGATCACCACAGCCGCCATTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 90 bp	TGCAGCCACTGCGCCGACCGTGGTACAGTCGCCGTTCTCATCACATaGGCACACCTTGACCTTTATGACAGATGTATTGGACAAGGGAGG	+
Preference number: 5 (lower is better) Translates to: CSHCADRGTVAVLIT*AHLDLYDRCIGQGR Trigger: CCTCCCTTGTCCAATACATCTGTCATAAAGGTCAAGGTGTGCCCATGTGATGAGAACGGCGACTGTACCACGGTCGGCGCAGTGGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	TTTGGTGCTGGAAAGCCAGATCCTCACCTAACAGCCTTGGGGAGCCTAAAGGGCACCAGAGCTCTGATGTaGAGGCCATGGCAGCAGTGT	+
Preference number: 5 (lower is better) Translates to: FGAGKPDPHLTALGSLKGTRALM*RPWQQC Trigger: ACACTGCTGCCATGGCCTCAACATCAGAGCTCTGGT...GCCCTTTAGGCTCCCCAAGGCTGTTAGGTGAGGATCTGGCTTTCCAGCACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	CATCTCAACAGACCACATACTCACTATGGGGAAACTGAGGCATCTCTGAGGGCCCAGATCTGTGCCTCCTaGGGTAGCAGCTGTGGTGCG	+
Preference number: 5 (lower is better) Translates to: HLNRPHTHYGETEASLRAQICAS*GSSCGA Trigger: CGCACCACAGCTGCTACCCAAGGAGGCACAGATCTG...GGCCCTCAGAGATGCCTCAGTTTCCCCATAGTGAGTATGTGGTCTGTTGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 90 bp	GTCCCATCCGCCCCGACTTTGAAGTCCAAGCTGTTGGTCTCATACTaGATACCTTTGGTGCCCACGCAGCTGCTGAACTCGACTTTGAGT	+
Preference number: 5 (lower is better) Translates to: VPSAPTLKSKLLVSY*IPLVPTQLLNSTLS Trigger: ACTCAAAGTCGAGTTCAGCAGCTGCGTGGGCACCAAAGGTATGCAGTATGAGACCAACAGCTTGGACTTCAAAGTCGGGGCGGATGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CCA 90 bp	ATTGATATCAATGAGGTAGATCTGCAGGGTCCCAGTGCCACTGGCTaGGGGGATCCCATTGTCAGCAGCCAGGAAGGTGGCCTCATATAC	+
Preference number: 5 (lower is better) Translates to: IDINEVDLQGPSATG*GDPIVSSQEGGLIY Trigger: GTATATGAGGCCACCTTCCTGGCTGCTGACAATGGGATCCCCCCAGCCAGTGGCACTGGGACCCTGCAGATCTACCTCATTGATATCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	GTGTGGCAGAGCCTGCTAGGTATGTGGTCTATGTACTACCACACCTGGTGCTCTTCATACTGCATACCTTaGGTGCCCACGCAGCTGCTG	+
Preference number: 5 (lower is better) Translates to: VWQSLLGMWSMYYHTWCSSYCIP*VPTQLL Trigger: CAGCAGCTGCGTGGGCACCAAAGGTATGCAGTATGA...AGAGCACCAGGTGTGGTAGTACATAGACCACATACCTAGCAGGCTCTGCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	AAGGAGCCAAACCACAGCCTTGTACTGCACAGAGCTGGCCACTGGCCTAGCTTGGGGATGTCATTGTCTTaGTCCGACCTGATCCTGACA	+
Preference number: 5 (lower is better) Translates to: KEPNHSLVLHRAGHWPSLGMSLS*SDLILT Trigger: TGTCAGGATCAGGTCGGACAAAGACAATGACATCCC...CAAGCTAGGCCAGTGGCCAGCTCTGTGCAGTACAAGGCTGTGGTTTGGCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	CGAGCAATTTGCATAGGACAGCCCTCCCAACCCTTTCATGAGCTCTGCTGCCCTACATATGTACCTGGCTaGGAGCCCTCATCCACAGAG	+
Preference number: 5 (lower is better) Translates to: RAICIGQPSQPFHELCCPTYVPG*EPSSTE Trigger: CTCTGTGGATGAGGGCTCCAAGCCAGGTACATATGT...AGGGCAGCAGAGCTCATGAAAGGGTTGGGAGGGCTGTCCTATGCAAATTGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTTTGGACAAGGGAGGGTaGCCAGAGTCTGTGACGATG	+
Preference number: 5 (lower is better) Translates to: YCPGPKQKGTLVVLGATALDKGG*PESVTM Trigger: CATCGTCACAGACTCTGGCAACCCTCCCTTGTCCAA...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	TACTGTCCTGGACCAAAGCAAAAAGGGACCTTGGTGGTATTGGGGGCGACAGCTCGCACACCAGGAGTTTaGCTCAGCACATGCTCCATG	+
Preference number: 5 (lower is better) Translates to: YCPGPKQKGTLVVLGATARTPGV*LSTCSM Trigger: CATGGAGCATGTGCTGAGCAAAACTCCTGGTGTGCG...AGCTGTCGCCCCCAATACCACCAAGGTCCCTTTTTGCTTTGGTCCAGGACAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS TCA 90 bp	CATCGTACTTCAGGATGTTGTCCCTCACGTCATCCTCAGGGTCGATaGGCAGCTGCTTTGTGTGCCTCTCCTTTTCTCTCCGCTTCATCC	+
Preference number: 5 (lower is better) Translates to: HRTSGCCPSRHPQGR*AAALCASPFLSASS Trigger: GGATGAAGCGGAGAGAAAAGGAGAGGCACACAAAGCAGCTGCTCATCGACCCTGAGGATGACGTGAGGGACAACATCCTGAAGTACGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 90 bp	TTGTCCCTCACGTCATCCTCAGGGTCGATGAGCAGCTGCTTTGTGTaGCTCTCCTTTTCTCTCCGCTTCATCCACACAACGAACAGCAGA	+
Preference number: 5 (lower is better) Translates to: LSLTSSSGSMSSCFV*LSFSLRFIHTTNSR Trigger: TCTGCTGTTCGTTGTGTGGATGAAGCGGAGAGAAAAGGAGAGGCACACAAAGCAGCTGCTCATCGACCCTGAGGATGACGTGAGGGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	CCGATACTAAGGCCTCCCAAGCTATCAGCATTCCTCAGCCCCTTCCTCGGGGAGTCCCCTGTTTCACTGTaGATGGTGAACATATTCTGG	+
Preference number: 5 (lower is better) Translates to: PILRPPKLSAFLSPFLGESPVSL*MVNIFW Trigger: CCAGAATATGTTCACCATCAACAGTGAAACAGGGGA...CTCCCCGAGGAAGGGGCTGAGGAATGCTGATAGCTTGGGAGGCCTTAGTATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	TCTTGGCTACCATGCCTACCAAACATATGCACACTTCCAAGAACCTTCTTGGGTGTGACCATGCCCTCATaGGTCACGGGGTCTGTGCGG	+
Preference number: 5 (lower is better) Translates to: SWLPCLPNICTLPRTFLGVTMPS*VTGSVR Trigger: CCGCACAGACCCCGTGACCAATGAGGGCATGGTCAC...ACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	TGCCTCCAGGTAACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAAGCTGAGGTCGTAGTCTaGGTCCTCCTCGCCACCGCC	+
Preference number: 5 (lower is better) Translates to: CLQVTDGFGTSHPRLFKKAEVVV*VLLATA Trigger: GGCGGTGGCGAGGAGGACCAAGACTACGACCTCAGC...TTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGTTACCTGGAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	ACTGAAGTGATCACCCTGCCCAGTTTGCCCTGTGTCAAGCTGTCAAGCTGCCATCTATCATCTGCATCGTaGGCTGTGACGGTCATCACA	+
Preference number: 5 (lower is better) Translates to: TEVITLPSLPCVKLSSCHLSSAS*AVTVIT Trigger: TGTGATGACCGTCACAGCCAACGATGCAGATGATAG...ATGGCAGCTTGACAGCTTGACACAGGGCAAACTGGGCAGGGTGATCACTTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	AAGGAGCCAAACCACAGCCTTGTACTGCACAGAGCTGGCCACTGGCCTAGCTTGTTTATGACAGATGTATaGGACAAGGGAGGGTTGCCA	+
Preference number: 5 (lower is better) Translates to: KEPNHSLVLHRAGHWPSLFMTDV*DKGGLP Trigger: TGGCAACCCTCCCTTGTCCAATACATCTGTCATAAA...CAAGCTAGGCCAGTGGCCAGCTCTGTGCAGTACAAGGCTGTGGTTTGGCTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	TTTCCCGAAACAACCACGGTCATGCGGGCTGCTGCACATTTGTCCATTTTCAAAACTGTCTGCCCTTTCTaGTGTTCAGAGTGTGCTGAC	+
Preference number: 5 (lower is better) Translates to: FPETTTVMRAAAHLSIFKTVCPF*CSECAD Trigger: GTCAGCACACTCTGAACACAAGAAAGGGCAGACAGT...TTTGAAAATGGACAAATGTGCAGCAGCCCGCATGACCGTGGTTGTTTCGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	TCTTGGCTACCATGCCTACCAAACATATGCACACTTCCAAGAACCTTCTTGGGTAGCAGCTGTGGTGCGTaGTCATTGATATCAATGAGG	+
Preference number: 5 (lower is better) Translates to: SWLPCLPNICTLPRTFLGSSCGA*SLISMR Trigger: CCTCATTGATATCAATGACAACGCACCACAGCTGCT...ACCCAAGAAGGTTCTTGGAAGTGTGCATATGTTTGGTAGGCATGGTAGCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS-3UTR CAA 90 bp	TGCCTCCAGGTAACTGATGGATTTGGTACCTCTCATCCCAGGCTTTTTAAGAAATCCATCACCGTGAGGTaGGCTACTACTGTCTCTATA	+
Preference number: 5 (lower is better) Translates to: CLQVTDGFGTSHPRLFKKSITVR*ATTVSI Trigger: TATAGAGACAGTAGTAGCCAACCTCACGGTGATGGA...TTTCTTAAAAAGCCTGGGATGAGAGGTACCAAATCCATCAGTTACCTGGAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	GAGGATCGCCACGATGGCGCCCGTGCCCAGGCCAGCTaGAGCCACTGCGCCGACCGTGGTACAGTCGCCGTT	+
Preference number: 6 (lower is better) Translates to: EDRHDGARAQAS*SHCADRGTVAV Trigger: AACGGCGACTGTACCACGGTCGGCGCAGTGGCTGCAGCTGGCCTGGGCACGGGCGCCATCGTGGCGATCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	CACGATGGCGCCCGTGCCCAGGCCAGCTGCAGCCACTaGGCCGACCGTGGTACAGTCGCCGTTCTCATCACA	+
Preference number: 6 (lower is better) Translates to: HDGARAQASCSH*ADRGTVAVLIT Trigger: TGTGATGAGAACGGCGACTGTACCACGGTCGGCGCAGTGGCTGCAGCTGGCCTGGGCACGGGCGCCATCGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 72 bp	CCGTGCCCAGGCCAGCTGCAGCCACTGCGCCGACCGTaGTACAGTCGCCGTTCTCATCACATGGGCACACCT	+
Preference number: 6 (lower is better) Translates to: PCPGQLQPLRRP*YSRRSHHMGTP Trigger: AGGTGTGCCCATGTGATGAGAACGGCGACTGTACCACGGTCGGCGCAGTGGCTGCAGCTGGCCTGGGCACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 72 bp	ACGTTACAGTCCCAGACCCATGTCCCGTGGAGTGCGTaGGGTCCCCAGGAAGCCTCACCTGGCTTGGAGCCC	+
Preference number: 6 (lower is better) Translates to: TLQSQTHVPWSA*GPQEASPGLEP Trigger: GGGCTCCAAGCCAGGTGAGGCTTCCTGGGGACCCCACGCACTCCACGGGACATGGGTCTGGGACTGTAACGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108911.2
CDS CCA 72 bp	GGAGTGCGTGGGGTCCCCAGGAAGCCTCACCTGGCTTaGAGCCCTCATCCACAGAGCCGTTGTAGACCTGGT	+
Preference number: 6 (lower is better) Translates to: GVRGVPRKPHLA*SPHPQSRCRPG Trigger: ACCAGGTCTACAACGGCTCTGTGGATGAGGGCTCCAAGCCAGGTGAGGCTTCCTGGGGACCCCACGCACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108911.2
CDS CCA 72 bp	CAGTGCTGTACGTTACAGTCCCAGACCCATGTCCCGTaGAGTGCGTGGGGTCCCCAGGAAGCCTCACCTGGC	+
Preference number: 6 (lower is better) Translates to: QCCTLQSQTHVP*SAWGPQEASPG Trigger: GCCAGGTGAGGCTTCCTGGGGACCCCACGCACTCCACGGGACATGGGTCTGGGACTGTAACGTACAGCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108911.2
CDS GCA 72 bp	CTGTACGTTACAGTCCCAGACCCATGTCCCGTGGAGTaGGTGGGGTCCCCAGGAAGCCTCACCTGGCTTGGA	+
Preference number: 6 (lower is better) Translates to: LYVTVPDPCPVE*VGSPGSLTWLG Trigger: TCCAAGCCAGGTGAGGCTTCCTGGGGACCCCACGCACTCCACGGGACATGGGTCTGGGACTGTAACGTACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108911.2
CDS CCA 72 bp	GAGATGGTTACCCCTGCTGTGGACTGGAAGGACATCTaGATCCCACTGGCCAGGGGCGCCTGGTTGGACACC	+
Preference number: 6 (lower is better) Translates to: EMVTPAVDWKDI*IPLARGAWLDT Trigger: GGTGTCCAACCAGGCGCCCCTGGCCAGTGGGATCCAGATGTCCTTCCAGTCCACAGCAGGGGTAACCATCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	GAACCGGTCAGGGTCCACTGCAGAAAAAGTGGTGAGTaGTGTCCCAGCGGGCACACCCTCTTCCAGGCGGAT	+
Preference number: 6 (lower is better) Translates to: EPVRVHCRKSGE*CPSGHTLFQAD Trigger: ATCCGCCTGGAAGAGGGTGTGCCCGCTGGGACAGCACTCACCACTTTTTCTGCAGTGGACCCTGACCGGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	CCTCACGGCTTGCTGCATGAACCGGTCAGGGTCCACTaGAGAAAAAGTGGTGAGTGCTGTCCCAGCGGGCAC	+
Preference number: 6 (lower is better) Translates to: PHGLLHEPVRVH*RKSGECCPSGH Trigger: GTGCCCGCTGGGACAGCACTCACCACTTTTTCTGCAGTGGACCCTGACCGGTTCATGCAGCAAGCCGTGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 72 bp	ACATCGGTGACAGAGATGGTTACCCCTGCTGTGGACTaGAAGGACATCTGGATCCCACTGGCCAGGGGCGCC	+
Preference number: 6 (lower is better) Translates to: TSVTEMVTPAVD*KDIWIPLARGA Trigger: GGCGCCCCTGGCCAGTGGGATCCAGATGTCCTTCCAGTCCACAGCAGGGGTAACCATCTCTGTCACCGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 90 bp	GACCCAGTCACGCTTCTGTCTCCTCAGCCCACCAGAGCTCTGATGTaGAGGCCATGGCAGCAGTGTGTCATTTGGCGGCTGAGAGGGGTC	+
Preference number: 6 (lower is better) Translates to: DPVTLLSPQPTRALM*RPWQQCVIWRLRGV Trigger: GACCCCTCTCAGCCGCCAAATGACACACTGCTGCCATGGCCTCAACATCAGAGCTCTGGTGGGCTGAGGAGACAGAAGCGTGACTGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS GCA 72 bp	CCTTCCATGTCAGTGGCCTGGACGATGACGGTGTACTaGTGGACTTTCTCTCTGTCCAGGCCTGCTGCCACG	+
Preference number: 6 (lower is better) Translates to: PSMSVAWTMTVY*WTFSLSRPAAT Trigger: CGTGGCAGCAGGCCTGGACAGAGAGAAAGTCCAGCAGTACACCGTCATCGTCCAGGCCACTGACATGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	CTGGCCGTTCATCCACCCGCCGCACACCAGGAGTTTTaGTCAGCACATGCTCCATGGCTTCTGGCTGTTGCA	+
Preference number: 6 (lower is better) Translates to: LAVHPPAAHQEF*SAHAPWLLAVA Trigger: TGCAACAGCCAGAAGCCATGGAGCATGTGCTGAGCAAAACTCCTGGTGTGCGGCGGGTGGATGAACGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 72 bp	TCTCCTCAGCCCACCAGAGCTCTGATGTTGAGGCCATaGCAGCAGTGTGTCATTTGGCGGCTGAGAGGGGTC	+
Preference number: 6 (lower is better) Translates to: SPQPTRALMLRP*QQCVIWRLRGV Trigger: GACCCCTCTCAGCCGCCAAATGACACACTGCTGCCATGGCCTCAACATCAGAGCTCTGGTGGGCTGAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CCA 72 bp	TCCATGTCAGTGGCCTGGACGATGACGGTGTACTGCTaGACTTTCTCTCTGTCCAGGCCTGCTGCCACGGTC	+
Preference number: 6 (lower is better) Translates to: SMSVAWTMTVYC*TFSLSRPAATV Trigger: GACCGTGGCAGCAGGCCTGGACAGAGAGAAAGTCCAGCAGTACACCGTCATCGTCCAGGCCACTGACATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 72 bp	AAGGACATCTGGATCCCACTGGCCAGGGGCGCCTGGTaGGACACCATTACGGTCAGCATGAAGGCACGGTTC	+
Preference number: 6 (lower is better) Translates to: KDIWIPLARGAW*DTITVSMKARF Trigger: GAACCGTGCCTTCATGCTGACCGTAATGGTGTCCAACCAGGCGCCCCTGGCCAGTGGGATCCAGATGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 72 bp	ACTGGCCGTTCATCCACCCGCCGCACACCAGGAGTTTaGCTCAGCACATGCTCCATGGCTTCTGGCTGTTGC	+
Preference number: 6 (lower is better) Translates to: TGRSSTRRTPGV*LSTCSMASGCC Trigger: GCAACAGCCAGAAGCCATGGAGCATGTGCTGAGCAAAACTCCTGGTGTGCGGCGGGTGGATGAACGGCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 90 bp	GCCCACCAGAGCTCTGATGTTGAGGCCATGGCAGCAGTGTGTCATTaGGCGGCTGAGAGGGGTCTAGGGCCACTGTCTGCCCTTTCTTGT	+
Preference number: 6 (lower is better) Translates to: AHQSSDVEAMAAVCH*AAERGLGPLSALSC Trigger: ACAAGAAAGGGCAGACAGTGGCCCTAGACCCCTCTCAGCCGCCAAATGACACACTGCTGCCATGGCCTCAACATCAGAGCTCTGGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CAA 90 bp	CTGTCCAGGCCTGCTGCCACGGTCACGATGTCCCCTGTTTCACTGTaGATGGTGAACATATTCTGGGATGGGCTCTGGGGTGTCTGGGTG	+
Preference number: 6 (lower is better) Translates to: LSRPAATVTMSPVSL*MVNIFWDGLWGVWV Trigger: CACCCAGACACCCCAGAGCCCATCCCAGAATATGTTCACCATCAACAGTGAAACAGGGGACATCGTGACCGTGGCAGCAGGCCTGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS TCA 72 bp	GGCCACTGTCTGCCCTTTCTTGTGTTCAGAGTGTGCTaGCGATGTCTGGGCTACCAGCAGCCGCACCATAGC	+
Preference number: 6 (lower is better) Translates to: GHCLPFLVFRVC*RCLGYQQPHHS Trigger: GCTATGGTGCGGCTGCTGGTAGCCCAGACATCGTCAGCACACTCTGAACACAAGAAAGGGCAGACAGTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS TCA 72 bp	CCCACTTATGATTCGGTAGACGGCGTTCCAGTTGGGTaGGTGGGGCTGGTCTCGGTCCATCACCGTGAGGTT	+
Preference number: 6 (lower is better) Translates to: PTYDSVDGVPVG*VGLVSVHHREV Trigger: AACCTCACGGTGATGGACCGAGACCAGCCCCACTCACCCAACTGGAACGCCGTCTACCGAATCATAAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS TCA 72 bp	CCAGGGGCGCCTGGTTGGACACCATTACGGTCAGCATaGAGGCACGGTTCAGCTCATAGTCCACTGCCTTCA	+
Preference number: 6 (lower is better) Translates to: PGAPGWTPLRSA*RHGSAHSPLPS Trigger: TGAAGGCAGTGGACTATGAGCTGAACCGTGCCTTCATGCTGACCGTAATGGTGTCCAACCAGGCGCCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	AGGGACTCTCGGTCCAGAATGGCGGCTGTGGTGATCTaGCCATTGGATGTGTTGATGTGCAGCCAGTTGGCG	+
Preference number: 6 (lower is better) Translates to: RDSRSRMAAVVI*PLDVLMCSQLA Trigger: CGCCAACTGGCTGCACATCAACACATCCAATGGGCAGATCACCACAGCCGCCATTCTGGACCGAGAGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 72 bp	TCCTCGCCACCGCCCTCTTCATCGTACTTCAGGATGTaGTCCCTCACGTCATCCTCAGGGTCGATGAGCAGC	+
Preference number: 6 (lower is better) Translates to: SSPPPSSSYFRM*SLTSSSGSMSS Trigger: GCTGCTCATCGACCCTGAGGATGACGTGAGGGACAACATCCTGAAGTACGATGAAGAGGGCGGTGGCGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 90 bp	GTGGCGAAGACTGTCCCATCCGCCCCGACTTTGAAGTCCAAGCTGTaGGTCTCATACTGCATACCTTTGGTGCCCACGCAGCTGCTGAAC	+
Preference number: 6 (lower is better) Translates to: VAKTVPSAPTLKSKL*VSYCIPLVPTQLLN Trigger: GTTCAGCAGCTGCGTGGGCACCAAAGGTATGCAGTATGAGACCAACAGCTTGGACTTCAAAGTCGGGGCGGATGGGACAGTCTTCGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CAA 90 bp	GTGCAGCCAGTTGGCGGGATCAGACAGTTTGGAGTACCTCACGGCTaGCTGCATGAACCGGTCAGGGTCCACTGCAGAAAAAGTGGTGAG	+
Preference number: 6 (lower is better) Translates to: VQPVGGIRQFGVPHG*LHEPVRVHCRKSGE Trigger: CTCACCACTTTTTCTGCAGTGGACCCTGACCGGTTCATGCAGCAAGCCGTGAGGTACTCCAAACTGTCTGATCCCGCCAACTGGCTGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	GACGGTGTACTGCTGGACTTTCTCTCTGTCCAGGCCTaGTGCCACGGTCACGATGTCCCCTGTTTCACTGTT	+
Preference number: 6 (lower is better) Translates to: DGVLLDFLSVQA*CHGHDVPCFTV Trigger: AACAGTGAAACAGGGGACATCGTGACCGTGGCAGCAGGCCTGGACAGAGAGAAAGTCCAGCAGTACACCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 72 bp	TGCCCTTTCTTGTGTTCAGAGTGTGCTGACGATGTCTaGGCTACCAGCAGCCGCACCATAGCAGCCCATTGC	+
Preference number: 6 (lower is better) Translates to: CPFLCSECADDV*ATSSRTIAAHC Trigger: GCAATGGGCTGCTATGGTGCGGCTGCTGGTAGCCCAGACATCGTCAGCACACTCTGAACACAAGAAAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CAA 72 bp	GGTGAGTGGGGCTGGTCTCGGTCCATCACCGTGAGGTaGGCTACTACTGTCTCTATACGGTTCTCAGGAACC	+
Preference number: 6 (lower is better) Translates to: GEWGWSRSITVR*ATTVSIRFSGT Trigger: GGTTCCTGAGAACCGTATAGAGACAGTAGTAGCCAACCTCACGGTGATGGACCGAGACCAGCCCCACTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 90 bp	TTCCAGTTGGGTGAGTGGGGCTGGTCTCGGTCCATCACCGTGAGGTaGGCTACTACTGTCTCTATACGGTTCTCAGGAACCTCTCCTGCA	+
Preference number: 6 (lower is better) Translates to: FQLGEWGWSRSITVR*ATTVSIRFSGTSPA Trigger: TGCAGGAGAGGTTCCTGAGAACCGTATAGAGACAGTAGTAGCCAACCTCACGGTGATGGACCGAGACCAGCCCCACTCACCCAACTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 90 bp	TCTCGGTCCAGAATGGCGGCTGTGGTGATCTGCCCATTGGATGTGTaGATGTGCAGCCAGTTGGCGGGATCAGACAGTTTGGAGTACCTC	+
Preference number: 6 (lower is better) Translates to: SRSRMAAVVICPLDV*MCSQLAGSDSLEYL Trigger: GAGGTACTCCAAACTGTCTGATCCCGCCAACTGGCTGCACATCAACACATCCAATGGGCAGATCACCACAGCCGCCATTCTGGACCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 90 bp	GCGCCGACCGTGGTACAGTCGCCGTTCTCATCACATGGGCACACCTaGACCTTTATGACAGATGTATTGGACAAGGGAGGGTTGCCAGAG	+
Preference number: 6 (lower is better) Translates to: APTVVQSPFSSHGHT*TFMTDVLDKGGLPE Trigger: CTCTGGCAACCCTCCCTTGTCCAATACATCTGTCATAAAGGTCAAGGTGTGCCCATGTGATGAGAACGGCGACTGTACCACGGTCGGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS TCA 72 bp	AGTTGGGTGAGTGGGGCTGGTCTCGGTCCATCACCGTaGGGTTGGCTACTACTGTCTCTATACGGTTCTCAG	+
Preference number: 6 (lower is better) Translates to: SWVSGAGLGPSP*GWLLLSLYGSQ Trigger: CTGAGAACCGTATAGAGACAGTAGTAGCCAACCTCACGGTGATGGACCGAGACCAGCCCCACTCACCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	GGTGTACTGCTGGACTTTCTCTCTGTCCAGGCCTGCTaGCACGGTCACGATGTCCCCTGTTTCACTGTTGAT	+
Preference number: 6 (lower is better) Translates to: GVLLDFLSVQAC*HGHDVPCFTVD Trigger: ATCAACAGTGAAACAGGGGACATCGTGACCGTGGCAGCAGGCCTGGACAGAGAGAAAGTCCAGCAGTACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	GCGGGATCAGACAGTTTGGAGTACCTCACGGCTTGCTaGATGAACCGGTCAGGGTCCACTGCAGAAAAAGTG	+
Preference number: 6 (lower is better) Translates to: AGSDSLEYLTAC*MNRSGSTAEKV Trigger: CACTTTTTCTGCAGTGGACCCTGACCGGTTCATGCAGCAAGCCGTGAGGTACTCCAAACTGTCTGATCCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 72 bp	CAGCAGCCAGGAAGGTGGCCTCATATACATTGTTCTTaGTGTAGAGGGACTCTCGGTCCAGAATGGCGGCTG	+
Preference number: 6 (lower is better) Translates to: QQPGRWPHIHCS*CRGTLGPEWRL Trigger: CAGCCGCCATTCTGGACCGAGAGTCCCTCTACACCAAGAACAATGTATATGAGGCCACCTTCCTGGCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 72 bp	ACCAGGAGTTTTGCTCAGCACATGCTCCATGGCTTCTaGCTGTTGCAGCTGGCTGAGGTCGTAGTCTTGGTC	+
Preference number: 6 (lower is better) Translates to: TRSFAQHMLHGF*LLQLAEVVVLV Trigger: GACCAAGACTACGACCTCAGCCAGCTGCAACAGCCAGAAGCCATGGAGCATGTGCTGAGCAAAACTCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 72 bp	ACTGTCCCATCCGCCCCGACTTTGAAGTCCAAGCTGTaGGTCTCATACTGCATACCTTTGGTGCCCACGCAG	+
Preference number: 6 (lower is better) Translates to: TVPSAPTLKSKL*VSYCIPLVPTQ Trigger: CTGCGTGGGCACCAAAGGTATGCAGTATGAGACCAACAGCTTGGACTTCAAAGTCGGGGCGGATGGGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CAA 72 bp	CCTGCTGCCACGGTCACGATGTCCCCTGTTTCACTGTaGATGGTGAACATATTCTGGGATGGGCTCTGGGGT	+
Preference number: 6 (lower is better) Translates to: PAATVTMSPVSL*MVNIFWDGLWG Trigger: ACCCCAGAGCCCATCCCAGAATATGTTCACCATCAACAGTGAAACAGGGGACATCGTGACCGTGGCAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 72 bp	GTTGGCGGGATCAGACAGTTTGGAGTACCTCACGGCTaGCTGCATGAACCGGTCAGGGTCCACTGCAGAAAA	+
Preference number: 6 (lower is better) Translates to: VGGIRQFGVPHG*LHEPVRVHCRK Trigger: TTTTCTGCAGTGGACCCTGACCGGTTCATGCAGCAAGCCGTGAGGTACTCCAAACTGTCTGATCCCGCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS TCA 72 bp	TCAGGATGTTGTCCCTCACGTCATCCTCAGGGTCGATaGGCAGCTGCTTTGTGTGCCTCTCCTTTTCTCTCC	+
Preference number: 6 (lower is better) Translates to: SGCCPSRHPQGR*AAALCASPFLS Trigger: GGAGAGAAAAGGAGAGGCACACAAAGCAGCTGCTCATCGACCCTGAGGATGACGTGAGGGACAACATCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	TTGGCGGGATCAGACAGTTTGGAGTACCTCACGGCTTaGTGCATGAACCGGTCAGGGTCCACTGCAGAAAAA	+
Preference number: 6 (lower is better) Translates to: LAGSDSLEYLTA*CMNRSGSTAEK Trigger: TTTTTCTGCAGTGGACCCTGACCGGTTCATGCAGCAAGCCGTGAGGTACTCCAAACTGTCTGATCCCGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	AGAGTCTGTGACGATGATGGGGACGTCATACACCCCTaGTTCCAGATACAGGATTCTCAGACTGAGCTGGGC	+
Preference number: 6 (lower is better) Translates to: RVCDDDGDVIHP*FQIQDSQTELG Trigger: GCCCAGCTCAGTCTGAGAATCCTGTATCTGGAAGCAGGGGTGTATGACGTCCCCATCATCGTCACAGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	TTGTCCCTCACGTCATCCTCAGGGTCGATGAGCAGCTaGTTTGTGTGCCTCTCCTTTTCTCTCCGCTTCATC	+
Preference number: 6 (lower is better) Translates to: LSLTSSSGSMSS*FVCLSFSLRFI Trigger: GATGAAGCGGAGAGAAAAGGAGAGGCACACAAAGCAGCTGCTCATCGACCCTGAGGATGACGTGAGGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 72 bp	TCCCTAGTGGCGAAGACTGTCCCATCCGCCCCGACTTaGAAGTCCAAGCTGTTGGTCTCATACTGCATACCT	+
Preference number: 6 (lower is better) Translates to: SLVAKTVPSAPT*KSKLLVSYCIP Trigger: AGGTATGCAGTATGAGACCAACAGCTTGGACTTCAAAGTCGGGGCGGATGGGACAGTCTTCGCCACTAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CAA 72 bp	AGAATGGCGGCTGTGGTGATCTGCCCATTGGATGTGTaGATGTGCAGCCAGTTGGCGGGATCAGACAGTTTG	+
Preference number: 6 (lower is better) Translates to: RMAAVVICPLDV*MCSQLAGSDSL Trigger: CAAACTGTCTGATCCCGCCAACTGGCTGCACATCAACACATCCAATGGGCAGATCACCACAGCCGCCATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 90 bp	ATCTTCAACTCCCTAGTGGCGAAGACTGTCCCATCCGCCCCGACTTaGAAGTCCAAGCTGTTGGTCTCATACTGCATACCTTTGGTGCCC	+
Preference number: 6 (lower is better) Translates to: IFNSLVAKTVPSAPT*KSKLLVSYCIPLVP Trigger: GGGCACCAAAGGTATGCAGTATGAGACCAACAGCTTGGACTTCAAAGTCGGGGCGGATGGGACAGTCTTCGCCACTAGGGAGTTGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CAA 72 bp	ATACCTTTGGTGCCCACGCAGCTGCTGAACTCGACTTaGAGTAGTTTCTCTCCTTCCAGGACATTCGGGGAG	+
Preference number: 6 (lower is better) Translates to: IPLVPTQLLNST*SSFSPSRTFGE Trigger: CTCCCCGAATGTCCTGGAAGGAGAGAAACTACTCAAAGTCGAGTTCAGCAGCTGCGTGGGCACCAAAGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CAA 72 bp	GGTGTCTGGGTGACAATTCTGTACCTCACCATGCCATaGGCTGTGGTGCTATCATCTGCATCGTTGGCTGTG	+
Preference number: 6 (lower is better) Translates to: GVWVTILYLTMP*AVVLSSASLAV Trigger: CACAGCCAACGATGCAGATGATAGCACCACAGCCAATGGCATGGTGAGGTACAGAATTGTCACCCAGACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 90 bp	TCATACTGCATACCTTTGGTGCCCACGCAGCTGCTGAACTCGACTTaGAGTAGTTTCTCTCCTTCCAGGACATTCGGGGAGATCAACGCA	+
Preference number: 6 (lower is better) Translates to: SYCIPLVPTQLLNST*SSFSPSRTFGEINA Trigger: TGCGTTGATCTCCCCGAATGTCCTGGAAGGAGAGAAACTACTCAAAGTCGAGTTCAGCAGCTGCGTGGGCACCAAAGGTATGCAGTATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS CAA 90 bp	GCCCCGACTTTGAAGTCCAAGCTGTTGGTCTCATACTGCATACCTTaGGTGCCCACGCAGCTGCTGAACTCGACTTTGAGTAGTTTCTCT	+
Preference number: 6 (lower is better) Translates to: APTLKSKLLVSYCIP*VPTQLLNSTLSSFS Trigger: AGAGAAACTACTCAAAGTCGAGTTCAGCAGCTGCGTGGGCACCAAAGGTATGCAGTATGAGACCAACAGCTTGGACTTCAAAGTCGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000314.13 ENSMUST00000108911.2
CDS TCA 72 bp	GGTTCTCAGGAACCTCTCCTGCAAATGTGCTTGTGGTaGATTCCGGAGGGTTGTCATTTACGTCTGTCACCG	+
Preference number: 6 (lower is better) Translates to: GSQEPLLQMCLW*IPEGCHLRLSP Trigger: CGGTGACAGACGTAAATGACAACCCTCCGGAATTCACCACAAGCACATTTGCAGGAGAGGTTCCTGAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 72 bp	GTGGTACAGTCGCCGTTCTCATCACATGGGCACACCTaGACCTTTATGACAGATGTATTGGACAAGGGAGGG	+
Preference number: 6 (lower is better) Translates to: VVQSPFSSHGHT*TFMTDVLDKGG Trigger: CCCTCCCTTGTCCAATACATCTGTCATAAAGGTCAAGGTGTGCCCATGTGATGAGAACGGCGACTGTACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CCA 72 bp	CCCTGTTTCACTGTTGATGGTGAACATATTCTGGGATaGGCTCTGGGGTGTCTGGGTGACAATTCTGTACCT	+
Preference number: 6 (lower is better) Translates to: PCFTVDGEHILG*ALGCLGDNSVP Trigger: AGGTACAGAATTGTCACCCAGACACCCCAGAGCCCATCCCAGAATATGTTCACCATCAACAGTGAAACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS CAA 72 bp	TCTCCTGCAAATGTGCTTGTGGTGAATTCCGGAGGGTaGTCATTTACGTCTGTCACCGTGATGATGGCAGTG	+
Preference number: 6 (lower is better) Translates to: SPANVLVVNSGG*SFTSVTVMMAV Trigger: CACTGCCATCATCACGGTGACAGACGTAAATGACAACCCTCCGGAATTCACCACAAGCACATTTGCAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13
CDS GCA 72 bp	TACTACTGTCTCTATACGGTTCTCAGGAACCTCTCCTaGAAATGTGCTTGTGGTGAATTCCGGAGGGTTGTC	+
Preference number: 6 (lower is better) Translates to: YYCLYTVLRNLS*KCACGEFRRVV Trigger: GACAACCCTCCGGAATTCACCACAAGCACATTTGCAGGAGAGGTTCCTGAGAACCGTATAGAGACAGTAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000314.13

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu