Pregenerated sensors for CDH26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039155Ensembl transcript IDs: ENSMUST00000042092.9, ENSMUST00000108912.9
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTaGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCC | + |
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Preference number: 1 (lower is better) Translates to: REWHHPQPRECRPPQ*TALPISFNPNKRNP Trigger: GGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| 3UTR CCA 90 bp | ACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCCACTaGCATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGT | + |
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Preference number: 1 (lower is better) Translates to: TALPISFNPNKRNPH*HARGTSPRCFPSDC Trigger: ACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCATGCCAGTGGGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGTGAACGCTGATGCTCATGTACACAGTCCATaGTCCCAGCCAGGGAATGGC | + |
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Preference number: 2 (lower is better) Translates to: SQSCSSEISKQRVVNADAHVHSP*SQPGNG Trigger: GCCATTCCCTGGCTGGGATCATGGACTGTGTACATG...AGCATCAGCGTTCACCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGAGAGTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCAAACCCCCACTGGCATaGCAGAGGTACATCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: KQRVVNADAQLAFSMYTVKPPLA*QRYISQ Trigger: CTGGGAGATGTACCTCTGGCATGCCAGTGGGGGTTT...GACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCACTCTCTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAAGAGAAACCCCCACTaGCATGCCAGAGGTACATCT | + |
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Preference number: 2 (lower is better) Translates to: VVNADAQLAFSMYTVHDPKRNPH*HARGTS Trigger: AGATGTACCTCTGGCATGCCAGTGGGGGTTTCTCTT...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCCACTGGCATGCCAGACCGCAGACTAGGAAGTaGCTAAGAATAAAGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: ALPISFNPNKRNPHWHARPQTRK*LRIKNK Trigger: TTTGTTCTTTATTCTTAGTCACTTCCTAGTCTGCGG...TCTGGCATGCCAGTGGGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| 3UTR CCA 72 bp | TCTCCATGTACACAGTCCATGATCCCAGCCAGGGAATaGCATCACCCACAGCCTAGGGAATGTCGCCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SPCTQSMIPARE*HHPQPRECRPP Trigger: TGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| 3UTR CCA 72 bp | CATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTaGACAGCTCTTCCCATCTCTTTTAACCCAAACAAG | + |
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Preference number: 3 (lower is better) Translates to: HHPQPRECRPPQ*TALPISFNPNK Trigger: CTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| 3UTR TCA 72 bp | AGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGTaGACGCTGATGCTCAGCTTGCTTTCTCCATGTACA | + |
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Preference number: 3 (lower is better) Translates to: SHVLLRSASREW*TLMLSLLSPCT Trigger: TGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCACTCTCTGCTTGCTGATCTCAGAAGAACATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGAAGTGCTGCACCAACTaGGGACAGGGCCCACCACAG | + |
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Preference number: 4 (lower is better) Translates to: PAREWHHPQPRECRPPQWKCCTN*GQGPPQ Trigger: CTGTGGTGGGCCCTGTCCCCAGTTGGTGCAGCACTT...CCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | GCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACACTTCCTTCCAGCAGCTaGAGGGGCTGCTGTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: AREWHHPQPRECRPPQWTLPSSS*RGCCLG Trigger: ACCCAGACAGCAGCCCCTGCAGCTGCTGGAAGGAAG...TGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGAGGGTGAAAGGCTGGTaGGTCATTGGTGTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PAREWHHPQPRECRPPQWRVKGW*VIGVQH Trigger: GTGCTGGACACCAATGACCCACCAGCCTTTCACCCT...CCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | CCAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGCGCTTCTCAGCATTGTaGGTTCAGCAGAGTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PAREWHHPQPRECRPPQWRFSAL*VQQSGL Trigger: AAGGCCACTCTGCTGAACTCACAATGCTGAGAAGCG...CCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGGTGGCCACTGTCACTTaGGATGAAGCCTCTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: PGNGITHSLGNVALHSGQVATVT*DEASEP Trigger: AGGCTCAGAGGCTTCATCCCAAGTGACAGTGGCCAC...CTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGAGCAGGGGCTGCTGTCTaGGTACCATACGATCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: QPGNGITHSLGNVALHSGAGAAV*VPYDPD Trigger: ATCTGGATCGTATGGTACCCAGACAGCAGCCCCTGC...TCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGATACTCTGGAGCTTCTaGCTCCATGCCTCCACCACT | + |
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Preference number: 4 (lower is better) Translates to: PAREWHHPQPRECRPPQWILWSF*LHASTT Trigger: AGTGGTGGAGGCATGGAGCCAGAAGCTCCAGAGTAT...CCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | CCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGGCAAAGGAGAGCAGCTaGCAGAACCATAAGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PGNGITHSLGNVALHSGQAKESS*QNHKCC Trigger: GCAGCACTTATGGTTCTGTCAGCTGCTCTCCTTTGC...CTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | CCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCACATTCAGAGCCACTaGGGCAGGAGCAGATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: PGNGITHSLGNVALHSGQHIQSH*GRSRFS Trigger: TGAGAATCTGCTCCTGCCGCAGTGGCTCTGAATGTG...CTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGTCAGCTATGAAGAGTaGCACCAAGTAATCCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: AREWHHPQPRECRPPQWTVSYEE*HQVIPG Trigger: CCCGGGGATTACTTGGTGCCACTCTTCATAGCTGAC...TGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | ACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAGCCAGGCTTCCTTCCAGCAGCTaGAGGGGCTGCTGTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: TLMLSLLSPCTQSMIPARLPSSS*RGCCLG Trigger: ACCCAGACAGCAGCCCCTGCAGCTGCTGGAAGGAAG...CCTGGCTGGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCAGGCTGGTGGGTCATTaGTGTCCAGCACCTGCACGC | + |
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Preference number: 4 (lower is better) Translates to: SLGNVALHSGQLFPSLLTRLVGH*CPAPAR Trigger: GCGTGCAGGTGCTGGACACCAATGACCCACCAGCCT...GGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAAAGTGCTGCACCAACTaGGGACAGGGCCCACCACAG | + |
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Preference number: 4 (lower is better) Translates to: HSLGNVALHSGQLFPSLLKCCTN*GQGPPQ Trigger: CTGTGGTGGGCCCTGTCCCCAGTTGGTGCAGCACTT...TAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAACAATCAGTGTCTGGTaGCCACTGTCACTTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: AREWHHPQPRECRPPQWTTISVW*PLSLGM Trigger: CATCCCAAGTGACAGTGGCCACCAGACACTGATTGT...TGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | GCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAACACCCTGTTCGACTTaGCCTTCAGAAATCCGAATC | + |
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Preference number: 4 (lower is better) Translates to: AREWHHPQPRECRPPQWTTPCST*PSEIRI Trigger: GATTCGGATTTCTGAAGGTCAAGTCGAACAGGGTGT...TGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | CCATGTACACAGTCCATGATCCCAGCCAGGGAATGGCATCACCCACAGCCTAGGCGCTTCTCAGCATTGTaGGTTCAGCAGAGTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PCTQSMIPAREWHHPQPRRFSAL*VQQSGL Trigger: AAGGCCACTCTGCTGAACTCACAATGCTGAGAAGCG...CCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGATCCTTCTCAGGAAACTaGGGTGCATGGTCATTCACA | + |
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Preference number: 4 (lower is better) Translates to: QPGNGITHSLGNVALHSGSFSGN*GAWSFT Trigger: TGTGAATGACCATGCACCCCAGTTTCCTGAGAAGGA...TCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCATGTACACAGTCCATGATCCCAGCCAGGGAATGGCATCACCCACAGCCTAGGATACTCTGGAGCTTCTaGCTCCATGCCTCCACCACT | + |
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Preference number: 4 (lower is better) Translates to: PCTQSMIPAREWHHPQPRILWSF*LHASTT Trigger: AGTGGTGGAGGCATGGAGCCAGAAGCTCCAGAGTAT...CCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAAGAACATCAATACTCTaGAGCTTCTGGCTCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: AREWHHPQPRECRPPQWTRTSIL*SFWLHA Trigger: GGCATGGAGCCAGAAGCTCCAGAGTATTGATGTTCT...TGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | AGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCGCAGTTCCAGGGTGGTaGGAACCCATCTTCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLGNVALHSGQLFPSLLTAVPGW*EPIFSW Trigger: CCAAGAGAAGATGGGTTCTCACCACCCTGGAACTGC...GGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | CCAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGTTGGAGCATTGTCGTTaGCATCAGATAGGAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PAREWHHPQPRECRPPQWLEHCR*HQIGKA Trigger: TGCTTTTCCTATCTGATGTCAACGACAATGCTCCAA...CCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | GCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAAAAAATAGGTTGACCTaGGGCTTGGCTCTCTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: AREWHHPQPRECRPPQWTKNRLT*GLALFH Trigger: GTGAAAGAGAGCCAAGCCGCAGGTCAACCTATTTTT...TGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAATACTTAACAACCCTTaGTTGGTCTCAGGGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: AREWHHPQPRECRPPQWTILNNP*LVSGSV Trigger: GACTGACCCTGAGACCAACCAAGGGTTGTTAAGTAT...TGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCCATCGCCTTCCTCAATaGCTGCAGCTGGCCCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: PPQWTALPISFNPNKRNPHRLPQ*LQLALR Trigger: ACGGAGGGCCAGCTGCAGCCATTGAGGAAGGCGATG...GGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCAGGCTGGTGGGTCATTaGTGTCCAGCACCTGCACGC | + |
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Preference number: 4 (lower is better) Translates to: ALHSGQLFPSLLTQTRETRLVGH*CPAPAR Trigger: GCGTGCAGGTGCTGGACACCAATGACCCACCAGCCT...GGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | ACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAGCCAGGAGGGTGAAAGGCTGGTaGGTCATTGGTGTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: TLMLSLLSPCTQSMIPARRVKGW*VIGVQH Trigger: GTGCTGGACACCAATGACCCACCAGCCTTTCACCCT...CCTGGCTGGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCTGAGGGTGAAAGGCTaGTGGGTCATTGGTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLGNVALHSGQLFPSLLTLRVKG*WVIGVQ Trigger: CTGGACACCAATGACCCACCAGCCTTTCACCCTCAG...GGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAGTGGCCACTGTCACTTaGGATGAAGCCTCTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: HSLGNVALHSGQLFPSLLVATVT*DEASEP Trigger: AGGCTCAGAGGCTTCATCCCAAGTGACAGTGGCCAC...TAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | ACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAGCCAGGTCTTCCACACTGACATaGATGGTGGCCGTGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: TLMLSLLSPCTQSMIPARSSTLT*MVAVDV Trigger: GACATCCACGGCCACCATTCATGTCAGTGTGGAAGA...CCTGGCTGGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | CCATGTACACAGTCCATGATCCCAGCCAGGGAATGGCATCACCCACAGCCTAGGCTCAGGAAACTGGGGTaGATGGTCATTCACATCTCT | + |
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Preference number: 4 (lower is better) Translates to: PCTQSMIPAREWHHPQPRLRKLG*MVIHIS Trigger: AGAGATGTGAATGACCATGCACCCCAGTTTCCTGAG...CCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | ACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAGCCAGGTTGGGGGAGAGGTCCTaGTCCAAGAAGGTTAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TLMLSLLSPCTQSMIPARLGERS*SKKVRE Trigger: CTCTCTAACCTTCTTGGAGCAGGACCTCTCCCCCAA...CCTGGCTGGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGTTTGGAGTGTTTTCTTaGTCCAAATCGACCGTTAAC | + |
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Preference number: 4 (lower is better) Translates to: PAREWHHPQPRECRPPQWFGVFS*SKSTVN Trigger: GTTAACGGTCGATTTGGACCAAGAAAACACTCCAAA...CCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCATGTACACAGTCCATGATCCCAGCCAGGGAATGGCATCACCCACAGCCTAGGGGTCTATTTGCTTCTTaGTGGTCACCACTCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: PCTQSMIPAREWHHPQPRGLFAS*WSPLLT Trigger: AGTCAGGAGTGGTGACCACCAAGAAGCAAATAGACC...CCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACGAGCAGATTCTCACGTaGACTGTCTGCTTCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: RECRPPQWTALPISFNPNEQILT*TVCFWA Trigger: CGCCCAGAAGCAGACAGTCCACGTGAGAATCTGCTC...GTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACGCAGGGGCTGCTGTCTaGGTACCATACGATCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: RECRPPQWTALPISFNPNAGAAV*VPYDPD Trigger: ATCTGGATCGTATGGTACCCAGACAGCAGCCCCTGC...GTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | CAGGAGTCTAAAGCAGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGGCAGTTCCAGGGTGGTaGGAACCCATCTTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QESKAASHVLLRSASREWAVPGW*EPIFSW Trigger: CCAAGAGAAGATGGGTTCTCACCACCCTGGAACTGC...CCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCTGCTTTAGACTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | AGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACCAGATAGACCTGGGCTaGAGGGACTTTGCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RECRPPQWTALPISFNPNQIDLG*RDFAFL Trigger: GAGGAAAGCAAAGTCCCTTCAGCCCAGGTCTATCTG...GTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | CCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGGAATTGTGTTCTCCATaGTGGTGTAAATGGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: PGNGITHSLGNVALHSGQELCSP*WCKWRI Trigger: GATTCTCCATTTACACCAGCATGGAGAACACAATTC...CTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | ACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAGCCAGGGTAGGGGTCCAGATCTaGATCCTCAGCTTCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLMLSLLSPCTQSMIPARVGVQI*ILSFYQ Trigger: CTGATAGAAGCTGAGGATGCAGATCTGGACCCCTAC...CCTGGCTGGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | GGCATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCGAGTGGCCTTCCCCCTaGTTTGTCCTCAGCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GMPEVHLPDVSQVTVTQTEWPSP*FVLSIQ Trigger: TTGGATGCTGAGGACAAAGCAGGGGGAAGGCCACTC...GGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCATGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | AAGCAGAGAGTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCGAGTGGCCTTCCCCCTaGTTTGTCCTCAGCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQRVVNADAQLAFSMYTVEWPSP*FVLSIQ Trigger: TTGGATGCTGAGGACAAAGCAGGGGGAAGGCCACTC...GACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCACTCTCTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACCGTGGATGTCAGGGATaGCTCTCCACAATCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RECRPPQWTALPISFNPNRGCQG*LSTITC Trigger: GCAAGTGATTGTGGAGAGCCATCCCTGACATCCACG...GTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCCTGAGGGTGAAAGGCTaGTGGGTCATTGGTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPQWTALPISFNPNKRNPLRVKG*WVIGVQ Trigger: CTGGACACCAATGACCCACCAGCCTTTCACCCTCAG...GGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | CACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTACGATCGACAGGGCGGTaGACATATATTTTTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGNVALHSGQLFPSLLRSTGR*TYIFPL Trigger: GAGTGGAAAAATATATGTTCACCGCCCTGTCGATCG...TAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | GCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCCACTGGCATGCCAGATCTTCCACACTGACATaGATGGTGGCCGTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALPISFNPNKRNPHWHARSSTLT*MVAVDV Trigger: GACATCCACGGCCACCATTCATGTCAGTGTGGAAGA...TCTGGCATGCCAGTGGGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | GGCATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCGCAAAGGAGAGCAGCTaGCAGAACCATAAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GMPEVHLPDVSQVTVTQTAKESS*QNHKCC Trigger: GCAGCACTTATGGTTCTGTCAGCTGCTCTCCTTTGC...GGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | AAGCAGAGAGTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCAGAAGGTTAGAGAGCTaGGGGTCTCAGCTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQRVVNADAQLAFSMYTVRRLES*GSQLLH Trigger: GTGAAGGAGCTGAGACCCTCAGCTCTCTAACCTTCT...GACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCACTCTCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | CCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCCACATTCAGAGCCACTaGGGCAGGAGCAGATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPQWTALPISFNPNKRNPHIQSH*GRSRFS Trigger: TGAGAATCTGCTCCTGCCGCAGTGGCTCTGAATGTG...GGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | CAGGAGTCTAAAGCAGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGTTGGGGGAGAGGTCCTaGTCCAAGAAGGTTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QESKAASHVLLRSASREWLGERS*SKKVRE Trigger: CTCTCTAACCTTCTTGGAGCAGGACCTCTCCCCCAA...CCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCTGCTTTAGACTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAGAACCCATCTTCTCTTaGATCGATGTAGAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSLGNVALHSGQLFPSLLEPIFS*IDVEAG Trigger: ACCAGCCTCTACATCGATCCAAGAGAAGATGGGTTC...TAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | ACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAGCCAGGGAACCCATCTTCTCTTaGATCGATGTAGAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLMLSLLSPCTQSMIPAREPIFS*IDVEAG Trigger: ACCAGCCTCTACATCGATCCAAGAGAAGATGGGTTC...CCTGGCTGGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGTCTAAAGCAGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGTTTAGGAAAGGGCCCTaGGTCTTCCTCCTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QESKAASHVLLRSASREWFRKGP*VFLLQF Trigger: GAACTGCAGGAGGAAGACCCAGGGCCCTTTCCTAAA...CCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCTGCTTTAGACTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGTGAACGCTGATGCTTTTAGGAAAGGGCCCTaGGTCTTCCTCCTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQSCSSEISKQRVVNADAFRKGP*VFLLQF Trigger: GAACTGCAGGAGGAAGACCCAGGGCCCTTTCCTAAA...AGCATCAGCGTTCACCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AAGGAGAGGTCCATGAATAGTGATCAATTTCCCAAATCATGCCCCTCATACACCCATCGCCTTCCTCAATaGCTGCAGCTGGCCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KERSMNSDQFPKSCPSYTHRLPQ*LQLALR Trigger: ACGGAGGGCCAGCTGCAGCCATTGAGGAAGGCGATG...GGTGTATGAGGGGCATGATTTGGGAAATTGATCACTATTCATGGACCTCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAGCTGTCAGCCCTGTCTaGGTCTGTAGCATTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GNVALHSGQLFPSLLTQTAVSPV*VCSIEV Trigger: TACTTCAATGCTACAGACCCAGACAGGGCTGACAGC...TGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCCACTGGCATGCCAGAGTCAGCTATGAAGAGTaGCACCAAGTAATCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPISFNPNKRNPHWHARVSYEE*HQVIPG Trigger: CCCGGGGATTACTTGGTGCCACTCTTCATAGCTGAC...TCTGGCATGCCAGTGGGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCCGATCGACAGGGCGGTaGACATATATTTTTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VVNADAQLAFSMYTVHDPRSTGR*TYIFPL Trigger: GAGTGGAAAAATATATGTTCACCGCCCTGTCGATCG...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | GGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAACACCCTGTTCGACTTaGCCTTCAGAAATCCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GNVALHSGQLFPSLLTQTTPCST*PSEIRI Trigger: GATTCGGATTTCTGAAGGTCAAGTCGAACAGGGTGT...TGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | CACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTATCTTCCACGTCTCCCTaGGCATTGTCCAAATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSLGNVALHSGQLFPSLLSSTSP*ALSKSK Trigger: TTTTGATTTGGACAATGCTCAGGGAGACGTGGAAGA...TAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | GGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACACCTGTCTGTCAGCTATaGAGAGTGGCACCAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GNVALHSGQLFPSLLTQTPVCQL*RVAPSN Trigger: ATTACTTGGTGCCACTCTTCATAGCTGACAGACAGG...TGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | GCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCGTAGGGGTCCAGATCTaGATCCTCAGCTTCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALHSGQLFPSLLTQTRETVGVQI*ILSFYQ Trigger: CTGATAGAAGCTGAGGATGCAGATCTGGACCCCTAC...GGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | AGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCGGGCTGAAGGGACTTTaGTTTCCTCGTTATACACAA | + |
|
Preference number: 4 (lower is better) Translates to: SLGNVALHSGQLFPSLLTGLKGL*FPRYTQ Trigger: TTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCC...GGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCCCACAACTTTCCCTGTaGATCGATCTACGGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVNADAQLAFSMYTVHDPPQLSL*IDLRHQ Trigger: TTGATGCCGTAGATCGATCCACAGGGAAAGTTGTGG...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCTCCTTCTCAGGAAACTaGGGTGCATGGTCATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VVNADAQLAFSMYTVHDPSFSGN*GAWSFT Trigger: TGTGAATGACCATGCACCCCAGTTTCCTGAGAAGGA...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCATGTACACAGTCCATGATCCCAGCCAGGGAATGGCATCACCCACAGCCTAGGTTTGGAGTGTTTTCTTaGTCCAAATCGACCGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PCTQSMIPAREWHHPQPRFGVFS*SKSTVN Trigger: GTTAACGGTCGATTTGGACCAAGAAAACACTCCAAA...CCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | ATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCACCCGTGGATGTCAGGGATaGCTCTCCACAATCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MPEVHLPDVSQVTVTQTTRGCQG*LSTITC Trigger: GCAAGTGATTGTGGAGAGCCATCCCTGACATCCACG...GGTGGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCGCTGTCAGCCCTGTCTaGGTCTGTAGCATTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALHSGQLFPSLLTQTRETAVSPV*VCSIEV Trigger: TACTTCAATGCTACAGACCCAGACAGGGCTGACAGC...GGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAGTTTGTATCTTATCTaGCTGTCAGCCCTGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVNADAQLAFSMYTVHDPSLYLI*LSALSG Trigger: CCCAGACAGGGCTGACAGCCAGATAAGATACAAACT...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACGGTCTATTTGCTTCTTaGTGGTCACCACTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RECRPPQWTALPISFNPNGLFAS*WSPLLT Trigger: AGTCAGGAGTGGTGACCACCAAGAAGCAAATAGACC...GTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGTGAACGCTGATGCTACAATCAGTGTCTGGTaGCCACTGTCACTTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQSCSSEISKQRVVNADATISVW*PLSLGM Trigger: CATCCCAAGTGACAGTGGCCACCAGACACTGATTGT...AGCATCAGCGTTCACCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CCATGTACACAGTCCATGATCCCAGCCAGGGAATGGCATCACCCACAGCCTAGGAGTTTTCACTCCTCTTaGCTCAAAGAAAGTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PCTQSMIPAREWHHPQPRSFHSS*LKESVT Trigger: TGTGACACTTTCTTTGAGCCAAGAGGAGTGAAAACT...CCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
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| CDS-3UTR CCA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAGAACATCAATACTCTaGAGCTTCTGGCTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVNADAQLAFSMYTVHDPRTSIL*SFWLHA Trigger: GGCATGGAGCCAGAAGCTCCAGAGTATTGATGTTCT...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR TCA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCTCTTCCACGTCTCCCTaGGCATTGTCCAAATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVNADAQLAFSMYTVHDPSSTSP*ALSKSK Trigger: TTTTGATTTGGACAATGCTCAGGGAGACGTGGAAGA...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR TCA 90 bp | GCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCTGTCTGTCAGCTATaGAGAGTGGCACCAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALHSGQLFPSLLTQTRETPVCQL*RVAPSN Trigger: ATTACTTGGTGCCACTCTTCATAGCTGACAGACAGG...GGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR GCA 90 bp | CAGGAGTCTAAAGCAGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGCTCAGGAAACTGGGGTaGATGGTCATTCACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QESKAASHVLLRSASREWLRKLG*MVIHIS Trigger: AGAGATGTGAATGACCATGCACCCCAGTTTCCTGAG...CCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCTGCTTTAGACTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACGGGCTGAAGGGACTTTaGTTTCCTCGTTATACACAA | + |
|
Preference number: 4 (lower is better) Translates to: RECRPPQWTALPISFNPNGLKGL*FPRYTQ Trigger: TTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCC...GTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CCA 90 bp | ACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAGCCAGGTTGTGTTCTCCATGCTaGTGTAAATGGAGAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLMLSLLSPCTQSMIPARLCSPC*CKWRIS Trigger: GGAGATTCTCCATTTACACCAGCATGGAGAACACAA...CCTGGCTGGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTATTGTGTTCTCCATGCTaGTGTAAATGGAGAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGNVALHSGQLFPSLLLCSPC*CKWRIS Trigger: GGAGATTCTCCATTTACACCAGCATGGAGAACACAA...TAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACTTAACAACCCTTGGTTaGTCTCAGGGTCAGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RECRPPQWTALPISFNPNLTTLG*SQGQSQ Trigger: TTGTGACTGACCCTGAGACCAACCAAGGGTTGTTAA...GTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGTGAACGCTGATGCTAGTTTGTATCTTATCTaGCTGTCAGCCCTGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQSCSSEISKQRVVNADASLYLI*LSALSG Trigger: CCCAGACAGGGCTGACAGCCAGATAAGATACAAACT...AGCATCAGCGTTCACCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AAGGAGAGGTCCATGAATAGTGATCAATTTCCCAAATCATGCCCCTCATACACCGAGCAGATTCTCACGTaGACTGTCTGCTTCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KERSMNSDQFPKSCPSYTEQILT*TVCFWA Trigger: CGCCCAGAAGCAGACAGTCCACGTGAGAATCTGCTC...GGTGTATGAGGGGCATGATTTGGGAAATTGATCACTATTCATGGACCTCTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GGCATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCAAAGTGTCACAACCCTaGGCTGAAGGGACTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GMPEVHLPDVSQVTVTQTKVSQP*AEGTLL Trigger: AAGCAAAGTCCCTTCAGCCCAGGGTTGTGACACTTT...GGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
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| CDS-3UTR CCA 90 bp | AAGCAGAGAGTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCCAGATAGACCGGGGTaGAAGACAGCAAAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQRVVNADAQLAFSMYTVPDRPG*KTAKFS Trigger: TGAAAACTTTGCTGTCTTCCACCCCGGTCTATCTGG...GACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCACTCTCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
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| CDS-3UTR TCA 90 bp | AGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCTGTTTGACATATTATTaGAGAGCTCCCCAACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLGNVALHSGQLFPSLLTCLTYY*RAPQPV Trigger: AACTGGTTGGGGAGCTCTTCAATAATATGTCAAACA...GGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCCCACACCAGGTCCTCTaGTTAAATATATCAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VVNADAQLAFSMYTVHDPPHQVL*LNISVT Trigger: TGTCACTGATATATTTAATCAGAGGACCTGGTGTGG...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GGCATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCCCATGCTGGTGTAAATaGAGAATCTCCATCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GMPEVHLPDVSQVTVTQTPCWCK*RISILD Trigger: GTCCAAGATGGAGATTCTCCATTTACACCAGCATGG...GGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | GGCATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCTTAACAACCCTTGGTTaGTCTCAGGGTCAGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GMPEVHLPDVSQVTVTQTLTTLG*SQGQSQ Trigger: TTGTGACTGACCCTGAGACCAACCAAGGGTTGTTAA...GGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGTGAACGCTGATGCTATACTTAACAACCCTTaGTTGGTCTCAGGGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQSCSSEISKQRVVNADAILNNP*LVSGSV Trigger: GACTGACCCTGAGACCAACCAAGGGTTGTTAAGTAT...AGCATCAGCGTTCACCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | ACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCAGCCAGGGGTCACCCAATTTTCTaGATCATGAACCAGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLMLSLLSPCTQSMIPARGHPIF*IMNQFV Trigger: TACAAACTGGTTCATGATCCAGAAAATTGGGTGACC...CCTGGCTGGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGTCTAAAGCAGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGCTATTTGCTTCTTGGTaGTCACCACTCCTGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QESKAASHVLLRSASREWLFASW*SPLLTS Trigger: AGAAGTCAGGAGTGGTGACCACCAAGAAGCAAATAG...CCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCTGCTTTAGACTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | AGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACTGTTTGACATATTATTaGAGAGCTCCCCAACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RECRPPQWTALPISFNPNCLTYY*RAPQPV Trigger: AACTGGTTGGGGAGCTCTTCAATAATATGTCAAACA...GTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR TCA 90 bp | CAGGAGTCTAAAGCAGCCAGTCATGTTCTTCTGAGATCAGCAAGCAGAGAGTGGTTGGAGCATTGTCGTTaGCATCAGATAGGAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QESKAASHVLLRSASREWLEHCR*HQIGKA Trigger: TGCTTTTCCTATCTGATGTCAACGACAATGCTCCAA...CCACTCTCTGCTTGCTGATCTCAGAAGAACATGACTGGCTGCTTTAGACTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR GCA 90 bp | ATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCACCAAAAATAGGTTGACCTaGGGCTTGGCTCTCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MPEVHLPDVSQVTVTQTTKNRLT*GLALFH Trigger: GTGAAAGAGAGCCAAGCCGCAGGTCAACCTATTTTT...GGTGGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | ATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCACCGGTCACCCAATTTTCTaGATCATGAACCAGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: MPEVHLPDVSQVTVTQTTGHPIF*IMNQFV Trigger: TACAAACTGGTTCATGATCCAGAAAATTGGGTGACC...GGTGGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CCA 90 bp | AAGGAGAGGTCCATGAATAGTGATCAATTTCCCAAATCATGCCCCTCATACACCCTATTTGCTTCTTGGTaGTCACCACTCCTGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KERSMNSDQFPKSCPSYTLFASW*SPLLTS Trigger: AGAAGTCAGGAGTGGTGACCACCAAGAAGCAAATAG...GGTGTATGAGGGGCATGATTTGGGAAATTGATCACTATTCATGGACCTCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | CCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGGAGCAGCCCAGCAACTaGGGGGAGAGGTCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGNGITHSLGNVALHSGQEQPSN*GERSCS Trigger: GGAGCAGGACCTCTCCCCCAAGTTGCTGGGCTGCTC...CTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | CCAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGGGCCTTCCCCCTGCTTaGTCCTCAGCATCCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PAREWHHPQPRECRPPQWGLPPA*SSASKS Trigger: AGACTTGGATGCTGAGGACAAAGCAGGGGGAAGGCC...CCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS TCA 90 bp | TCACGTGGACTGTCTGCTTCTGGGCGAGGCCCTGTCTGTCAGCTATaGAGAGTGGCACCAAGTAATCCCCGGGCGGGACGCTTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRGLSASGRGPVCQL*RVAPSNPRAGRFSA Trigger: TGCTGAGAAGCGTCCCGCCCGGGGATTACTTGGTGCCACTCTTCATAGCTGACAGACAGGGCCTCGCCCAGAAGCAGACAGTCCACGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 90 bp | AGGGGCTGGCTCCCAGCCGACTCACAGACCTCCAAGTGTCGGGAATaGGGCCGGAGGGTTGGAGCATTGTCGTTGACATCAGATAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RGWLPADSQTSKCRE*GRRVGALSLTSDRK Trigger: TTTCCTATCTGATGTCAACGACAATGCTCCAACCCTCCGGCCCCATTCCCGACACTTGGAGGTCTGTGAGTCGGCTGGGAGCCAGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 90 bp | GGCTCCTCACATTCAGAGCCACTGCGGCAGGAGCAGATTCTCACGTaGACTGTCTGCTTCTGGGCGAGGCCCTGTCTGTCAGCTATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSHSEPLRQEQILT*TVCFWARPCLSAMK Trigger: CTTCATAGCTGACAGACAGGGCCTCGCCCAGAAGCAGACAGTCCACGTGAGAATCTGCTCCTGCCGCAGTGGCTCTGAATGTGAGGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | CCATGTACACAGTCCATGATCCCAGCCAGGGAATGGCATCACCCACAGCCTAGGAAGGCTGGTGGGTCATaGGTGTCCAGCACCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: PCTQSMIPAREWHHPQPRKAGGS*VSSTCT Trigger: CGTGCAGGTGCTGGACACCAATGACCCACCAGCCTT...CCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS GCA 90 bp | ACCCATCTTCTCTTGGATCGATGTAGAGGCTGGTGGCTCTGTCCCTaGGGTAATGACAGCAGCAGCAGCAACCAGGCACAGCCTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: THLLLDRCRGWWLCP*GNDSSSSNQAQPLV Trigger: CACCAGAGGCTGTGCCTGGTTGCTGCTGCTGCTGTCATTACCGCAGGGACAGAGCCACCAGCCTCTACATCGATCCAAGAGAAGATGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 90 bp | TGGCTGTCAGCCCTGTCTGGGTCTGTAGCATTGAAGTATCCCAGCTaGATGGCGGGCCAGGCTCCATCCTCCTCACTGACAATGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WLSALSGSVALKYPS*MAGQAPSSSLTMKL Trigger: GAGCTTCATTGTCAGTGAGGAGGATGGAGCCTGGCCCGCCATCCAGCTGGGATACTTCAATGCTACAGACCCAGACAGGGCTGACAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | CCAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGAGAACCCATCTTCTCTaGGATCGATGTAGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAREWHHPQPRECRPPQWRTHLL*DRCRGW Trigger: CCAGCCTCTACATCGATCCAAGAGAAGATGGGTTCT...CCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 90 bp | AGGGTGGTGAGAACCCATCTTCTCTTGGATCGATGTAGAGGCTGGTaGCTCTGTCCCTGCGGTAATGACAGCAGCAGCAGCAACCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RVVRTHLLLDRCRGW*LCPCGNDSSSSNQA Trigger: TGCCTGGTTGCTGCTGCTGCTGTCATTACCGCAGGGACAGAGCCACCAGCCTCTACATCGATCCAAGAGAAGATGGGTTCTCACCACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 90 bp | TCCAGGGTGGTGAGAACCCATCTTCTCTTGGATCGATGTAGAGGCTaGTGGCTCTGTCCCTGCGGTAATGACAGCAGCAGCAGCAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRVVRTHLLLDRCRG*WLCPCGNDSSSSNQ Trigger: CTGGTTGCTGCTGCTGCTGTCATTACCGCAGGGACAGAGCCACCAGCCTCTACATCGATCCAAGAGAAGATGGGTTCTCACCACCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS TCA 90 bp | CCGTGCCAGTCAGCGGGGGAAGGCCGTTGTCAACTGCATGGACGATaGTTGTATAGAAACTGTCATTCACATGAGGGGACTCCCGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PCQSAGEGRCQLHGR*LYRNCHSHEGTPGL Trigger: TAGACCGGGAGTCCCCTCATGTGAATGACAGTTTCTATACAATCATCGTCCATGCAGTTGACAACGGCCTTCCCCCGCTGACTGGCACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | CCATGTACACAGTCCATGATCCCAGCCAGGGAATGGCATCACCCACAGCCTAGGCAACTGAAAAATAGGTaGACCTGCGGCTTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PCTQSMIPAREWHHPQPRQLKNR*TCGLAL Trigger: GAGAGCCAAGCCGCAGGTCAACCTATTTTTCAGTTG...CCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | CCAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGAAAGGACTTGAGAGTTaGGAGTGTTTTCTTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAREWHHPQPRECRPPQWKGLES*ECFLGP Trigger: TGGACCAAGAAAACACTCCAAACTCTCAAGTCCTTT...CCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | GCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGAGGCTATGGGCTACTaGAGATTCATAATCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AREWHHPQPRECRPPQWTEAMGY*RFIIQR Trigger: CCTTTGGATTATGAATCTCAAGTAGCCCATAGCCTC...TGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | CCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCAAGGCTGGTGGGTCATaGGTGTCCAGCACCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: PPQWTALPISFNPNKRNPKAGGS*VSSTCT Trigger: CGTGCAGGTGCTGGACACCAATGACCCACCAGCCTT...GGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | GCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGTTGGAGCATTGTCGTaGACATCAGATAGGAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AREWHHPQPRECRPPQWTVGALS*TSDRKS Trigger: GCTTTTCCTATCTGATGTCAACGACAATGCTCCAAC...TGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | CAGCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGAATCCCATATGTTGAATaGTGTTCTCCATGCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QPGNGITHSLGNVALHSGIPYVE*CSPCWC Trigger: ACACCAGCATGGAGAACACAATTCAACATATGGGAT...TCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | AAGCAGAGAGTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCGGCCTTCCCCCTGCTTaGTCCTCAGCATCCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KQRVVNADAQLAFSMYTVGLPPA*SSASKS Trigger: AGACTTGGATGCTGAGGACAAAGCAGGGGGAAGGCC...GACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCACTCTCTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 90 bp | GCTTTCCTCGTTATACACAATCAGTGTCTGGTGGCCACTGTCACTTaGGATGAAGCCTCTGAGCCTCTTGGGTCCAAATGTGCAGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AFLVIHNQCLVATVT*DEASEPLGSKCAGA Trigger: TGCTCCTGCACATTTGGACCCAAGAGGCTCAGAGGCTTCATCCCAAGTGACAGTGGCCACCAGACACTGATTGTGTATAACGAGGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS-3UTR CAA 90 bp | CACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAAGAACCCATCTTCTCTaGGATCGATGTAGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSLGNVALHSGQLFPSLLRTHLL*DRCRGW Trigger: CCAGCCTCTACATCGATCCAAGAGAAGATGGGTTCT...TAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGGGAATGGCATCACCCACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGAGGAAATAAAGGACTaGAGAGTTTGGAGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AREWHHPQPRECRPPQWTEEIKD*RVWSVF Trigger: GAAAACACTCCAAACTCTCAAGTCCTTTATTTCCTC...TGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTGGGTGATGCCATTCCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCGTGGGCATGTGGTTGTaGCTGTCTTCCACACTGACA | + |
|
Preference number: 5 (lower is better) Translates to: VVNADAQLAFSMYTVHDPVGMWL*LSSTLT Trigger: TGTCAGTGTGGAAGACAGCAACAACCACATGCCCAC...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | GGCATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCAAGCCTCTGAGCCTCTaGGGTCCAAATGTGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GMPEVHLPDVSQVTVTQTKPLSL*GPNVQE Trigger: CTCCTGCACATTTGGACCCAAGAGGCTCAGAGGCTT...GGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCAAGCCTCTGAGCCTCTaGGGTCCAAATGTGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPQWTALPISFNPNKRNPKPLSL*GPNVQE Trigger: CTCCTGCACATTTGGACCCAAGAGGCTCAGAGGCTT...GGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS TCA 90 bp | ATGAGGGGACTCCCGGTCTATTTGCTTCTTGGTGGTCACCACTCCTaGCTTCTCATCCACGGTCACCCAATTTTCTGGATCATGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: MRGLPVYLLLGGHHS*LLIHGHPIFWIMNQ Trigger: CTGGTTCATGATCCAGAAAATTGGGTGACCGTGGATGAGAAGTCAGGAGTGGTGACCACCAAGAAGCAAATAGACCGGGAGTCCCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS GCA 90 bp | GTCTGGGTACCATACGATCCAGATAGACCTGGGCTGAAGGGACTTTaGTTTCCTCGTTATACACAATCAGTGTCTGGTGGCCACTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VWVPYDPDRPGLKGL*FPRYTQSVSGGHCH Trigger: GTGACAGTGGCCACCAGACACTGATTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCCAGGTCTATCTGGATCGTATGGTACCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | AAGCAGAGAGTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCGTGGGCATGTGGTTGTaGCTGTCTTCCACACTGACA | + |
|
Preference number: 5 (lower is better) Translates to: KQRVVNADAQLAFSMYTVVGMWL*LSSTLT Trigger: TGTCAGTGTGGAAGACAGCAACAACCACATGCCCAC...GACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCACTCTCTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCCTTAACAACCCTTGGTaGGTCTCAGGGTCAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VVNADAQLAFSMYTVHDPLNNPW*VSGSVT Trigger: TGTGACTGACCCTGAGACCAACCAAGGGTTGTTAAG...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | GCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCGGTCTATTTGCTTCTaGGTGGTCACCACTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALHSGQLFPSLLTQTRETRSICF*VVTTPD Trigger: GTCAGGAGTGGTGACCACCAAGAAGCAAATAGACCG...GGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS GCA 90 bp | CTCTTGGCTCAAAGAAAGTGTCACAACCCTGGGCTGAAGGGACTTTaGTTTCCTCGTTATACACAATCAGTGTCTGGTGGCCACTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLAQRKCHNPGLKGL*FPRYTQSVSGGHCH Trigger: GTGACAGTGGCCACCAGACACTGATTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCCAGGGTTGTGACACTTTCTTTGAGCCAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
||
| CDS CCA 90 bp | AACTGTCATTCACATGAGGGGACTCCCGGTCTATTTGCTTCTTGGTaGTCACCACTCCTGACTTCTCATCCACGGTCACCCAATTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NCHSHEGTPGLFASW*SPLLTSHPRSPNFL Trigger: CAGAAAATTGGGTGACCGTGGATGAGAAGTCAGGAGTGGTGACCACCAAGAAGCAAATAGACCGGGAGTCCCCTCATGTGAATGACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | CCATGTACACAGTCCATGATCCCAGCCAGGGAATGGCATCACCCACAGCCTAGGTTGTTTGACATATTATaGAAGAGCTCCCCAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PCTQSMIPAREWHHPQPRLFDIL*KSSPTS Trigger: ACTGGTTGGGGAGCTCTTCAATAATATGTCAAACAA...CCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | CCATGTACACAGTCCATGATCCCAGCCAGGGAATGGCATCACCCACAGCCTAGGGAGGAAATAAAGGACTaGAGAGTTTGGAGTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PCTQSMIPAREWHHPQPREEIKD*RVWSVF Trigger: GAAAACACTCCAAACTCTCAAGTCCTTTATTTCCTC...CCTAGGCTGTGGGTGATGCCATTCCCTGGCTGGGATCATGGACTGTGTACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | GCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCTTAACAACCCTTGGTaGGTCTCAGGGTCAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ALHSGQLFPSLLTQTRETLNNPW*VSGSVT Trigger: TGTGACTGACCCTGAGACCAACCAAGGGTTGTTAAG...GGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | CACAGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAGAGGCTATGGGCTACTaGAGATTCATAATCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HSLGNVALHSGQLFPSLLEAMGY*RFIIQR Trigger: CCTTTGGATTATGAATCTCAAGTAGCCCATAGCCTC...TAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | ATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCACCCGGTCTATTTGCTTCTaGGTGGTCACCACTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: MPEVHLPDVSQVTVTQTTRSICF*VVTTPD Trigger: GTCAGGAGTGGTGACCACCAAGAAGCAAATAGACCG...GGTGGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 90 bp | AGAAACTGTCATTCACATGAGGGGACTCCCGGTCTATTTGCTTCTTaGTGGTCACCACTCCTGACTTCTCATCCACGGTCACCCAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RNCHSHEGTPGLFAS*WSPLLTSHPRSPNF Trigger: AAAATTGGGTGACCGTGGATGAGAAGTCAGGAGTGGTGACCACCAAGAAGCAAATAGACCGGGAGTCCCCTCATGTGAATGACAGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTAGGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCAAAGGACTTGAGAGTTaGGAGTGTTTTCTTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLGNVALHSGQLFPSLLTKGLES*ECFLGP Trigger: TGGACCAAGAAAACACTCCAAACTCTCAAGTCCTTT...GGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCCTAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | GCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCTGGAGAATCTCCATCTaGGACAGGGAGATACAACAC | + |
|
Preference number: 5 (lower is better) Translates to: ALHSGQLFPSLLTQTRETWRISI*DREIQH Trigger: GTGTTGTATCTCCCTGTCCAAGATGGAGATTCTCCA...GGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTGAACGCTGATGCTCAGCTTGCTTTCTCCATGTACACAGTCCATGATCCCTTGCCATCCCATATGTaGAATTGTGTTCTCCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVNADAQLAFSMYTVHDPLPSHM*NCVLHA Trigger: AGCATGGAGAACACAATTCAACATATGGGATGGCAA...GGGATCATGGACTGTGTACATGGAGAAAGCAAGCTGAGCATCAGCGTTCACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | ATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCACCAAATGGCCCTCCTCGTaGCCATCCCATATGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: MPEVHLPDVSQVTVTQTTKWPSS*PSHMLN Trigger: ATTCAACATATGGGATGGCAACGAGGAGGGCCATTT...GGTGGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | GGGAATGTCGCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAAGTTTTCACTCCTCTaGGCTCAAAGAAAGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GNVALHSGQLFPSLLTQTKFSLL*AQRKCH Trigger: GTGACACTTTCTTTGAGCCAAGAGGAGTGAAAACTT...TGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGCGACATTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
||
| CDS TCA 90 bp | AGTTTTCACTCCTCTTGGCTCAAAGAAAGTGTCACAACCCTGGGCTaGAGGGACTTTGCTTTCCTCGTTATACACAATCAGTGTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFHSSWLKESVTTLG*RDFAFLVIHNQCLV Trigger: CACCAGACACTGATTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCCAGGGTTGTGACACTTTCTTTGAGCCAAGAGGAGTGAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
||
| CDS GCA 90 bp | ATGGCCCTCCTCGTTGCCATCCCATATGTTGAATTGTGTTCTCCATaGTGGTGTAAATGGAGAATCTCCATCTTGGACAGGGAGATACAA | + |
|
Preference number: 5 (lower is better) Translates to: MALLVAIPYVELCSP*WCKWRISILDREIQ Trigger: TTGTATCTCCCTGTCCAAGATGGAGATTCTCCATTTACACCAGCATGGAGAACACAATTCAACATATGGGATGGCAACGAGGAGGGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCCCATCCCATATGTTGAATaGTGTTCTCCATGCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PPQWTALPISFNPNKRNPIPYVE*CSPCWC Trigger: ACACCAGCATGGAGAACACAATTCAACATATGGGAT...GGGGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | GCCCTCCACAGTGGACAGCTCTTCCCATCTCTTTTAACCCAAACAAGAGAAACCTTGCCATCCCATATGTaGAATTGTGTTCTCCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALHSGQLFPSLLTQTRETLPSHM*NCVLHA Trigger: AGCATGGAGAACACAATTCAACATATGGGATGGCAA...GGTTTCTCTTGTTTGGGTTAAAAGAGATGGGAAGAGCTGTCCACTGTGGAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | ATGCCAGAGGTACATCTCCCAGATGTTTCCCAAGTGACTGTAACACAAACCACCGTTGGAGCATTGTCGTaGACATCAGATAGGAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: MPEVHLPDVSQVTVTQTTVGALS*TSDRKS Trigger: GCTTTTCCTATCTGATGTCAACGACAATGCTCCAAC...GGTGGTTTGTGTTACAGTCACTTGGGAAACATCTGGGAGATGTACCTCTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGGTCCATGAATAGTGATCAATTTCCCAAATCATGCCCCTCATACACCAAATGGCCCTCCTCGTaGCCATCCCATATGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KERSMNSDQFPKSCPSYTKWPSS*PSHMLN Trigger: ATTCAACATATGGGATGGCAACGAGGAGGGCCATTT...GGTGTATGAGGGGCATGATTTGGGAAATTGATCACTATTCATGGACCTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGGTCCATGAATAGTGATCAATTTCCCAAATCATGCCCCTCATACACCTTGTTTGACATATTATaGAAGAGCTCCCCAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KERSMNSDQFPKSCPSYTLFDIL*KSSPTS Trigger: ACTGGTTGGGGAGCTCTTCAATAATATGTCAAACAA...GGTGTATGAGGGGCATGATTTGGGAAATTGATCACTATTCATGGACCTCTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS GCA 90 bp | GCTCTCTTTCACACTGATGTTAAATTCCTTCTCAGGAAACTGGGGTaGATGGTCATTCACATCTCTGATTCTAATGTTGAAAATCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALFHTDVKFLLRKLG*MVIHISDSNVENQG Trigger: TCCCTGATTTTCAACATTAGAATCAGAGATGTGAATGACCATGCACCCCAGTTTCCTGAGAAGGAATTTAACATCAGTGTGAAAGAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 90 bp | TCTTTCACACTGATGTTAAATTCCTTCTCAGGAAACTGGGGTGCATaGTCATTCACATCTCTGATTCTAATGTTGAAAATCAGGGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFTLMLNSFSGNWGA*SFTSLILMLKIRDS Trigger: TGAATCCCTGATTTTCAACATTAGAATCAGAGATGTGAATGACCATGCACCCCAGTTTCCTGAGAAGGAATTTAACATCAGTGTGAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS TCA 72 bp | CTGTCTGCTTCTGGGCGAGGCCCTGTCTGTCAGCTATaGAGAGTGGCACCAAGTAATCCCCGGGCGGGACGC | + |
|
Preference number: 6 (lower is better) Translates to: LSASGRGPVCQL*RVAPSNPRAGR Trigger: GCGTCCCGCCCGGGGATTACTTGGTGCCACTCTTCATAGCTGACAGACAGGGCCTCGCCCAGAAGCAGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | CATTGGTGTCCAGCACCTGCACGCTCACCATGGTGCTaGCCATCGCCTTCCTCAATGGCTGCAGCTGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HWCPAPARSPWC*PSPSSMAAAGP Trigger: AGGGCCAGCTGCAGCCATTGAGGAAGGCGATGGCCAGCACCATGGTGAGCGTGCAGGTGCTGGACACCAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | CACGCTCACCATGGTGCTGGCCATCGCCTTCCTCAATaGCTGCAGCTGGCCCTCCGTACAAACGAAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HAHHGAGHRLPQ*LQLALRTNEEL Trigger: CAGCTCTTCGTTTGTACGGAGGGCCAGCTGCAGCCATTGAGGAAGGCGATGGCCAGCACCATGGTGAGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | CTTCTGGGCGAGGCCCTGTCTGTCAGCTATGAAGAGTaGCACCAAGTAATCCCCGGGCGGGACGCTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLGEALSVSYEE*HQVIPGRDASQ Trigger: CTGAGAAGCGTCCCGCCCGGGGATTACTTGGTGCCACTCTTCATAGCTGACAGACAGGGCCTCGCCCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS TCA 72 bp | CCAAGTAATCCCCGGGCGGGACGCTTCTCAGCATTGTaGGTTCAGCAGAGTGGCCTTCCCCCTGCTTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSNPRAGRFSAL*VQQSGLPPALS Trigger: GGACAAAGCAGGGGGAAGGCCACTCTGCTGAACTCACAATGCTGAGAAGCGTCCCGCCCGGGGATTACTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS TCA 72 bp | TGGGGGAGAGGTCCTGCTCCAAGAAGGTTAGAGAGCTaGGGGTCTCAGCTCCTTCACACTCGCCCTCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: WGRGPAPRRLES*GSQLLHTRPPL Trigger: GAGAGGAGGGCGAGTGTGAAGGAGCTGAGACCCTCAGCTCTCTAACCTTCTTGGAGCAGGACCTCTCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS GCA 72 bp | CCACTGCGGCAGGAGCAGATTCTCACGTGGACTGTCTaGTTCTGGGCGAGGCCCTGTCTGTCAGCTATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLRQEQILTWTV*FWARPCLSAMK Trigger: CTTCATAGCTGACAGACAGGGCCTCGCCCAGAAGCAGACAGTCCACGTGAGAATCTGCTCCTGCCGCAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | GCCCTGTCTGGGTCTGTAGCATTGAAGTATCCCAGCTaGATGGCGGGCCAGGCTCCATCCTCCTCACTGACA | + |
|
Preference number: 6 (lower is better) Translates to: ALSGSVALKYPS*MAGQAPSSSLT Trigger: TGTCAGTGAGGAGGATGGAGCCTGGCCCGCCATCCAGCTGGGATACTTCAATGCTACAGACCCAGACAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | CTCCCAGCCGACTCACAGACCTCCAAGTGTCGGGAATaGGGCCGGAGGGTTGGAGCATTGTCGTTGACATCA | + |
|
Preference number: 6 (lower is better) Translates to: LPADSQTSKCRE*GRRVGALSLTS Trigger: TGATGTCAACGACAATGCTCCAACCCTCCGGCCCCATTCCCGACACTTGGAGGTCTGTGAGTCGGCTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | TCCAGATCTGCATCCTCAGCTTCTATCAGCAGGGGCTaGCTCCCAGCCGACTCACAGACCTCCAAGTGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSASSASISRG*LPADSQTSKCR Trigger: CCGACACTTGGAGGTCTGTGAGTCGGCTGGGAGCCAGCCCCTGCTGATAGAAGCTGAGGATGCAGATCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | CGGCAGGAGCAGATTCTCACGTGGACTGTCTGCTTCTaGGCGAGGCCCTGTCTGTCAGCTATGAAGAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RQEQILTWTVCF*ARPCLSAMKSG Trigger: GCCACTCTTCATAGCTGACAGACAGGGCCTCGCCCAGAAGCAGACAGTCCACGTGAGAATCTGCTCCTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | CATTCAGAGCCACTGCGGCAGGAGCAGATTCTCACGTaGACTGTCTGCTTCTGGGCGAGGCCCTGTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: HSEPLRQEQILT*TVCFWARPCLS Trigger: TGACAGACAGGGCCTCGCCCAGAAGCAGACAGTCCACGTGAGAATCTGCTCCTGCCGCAGTGGCTCTGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | CCACTCTTCCTTCCAGCAGCTGCAGGGGCTGCTGTCTaGGTACCATACGATCCAGATAGACCGGGGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLFLPAAAGAAV*VPYDPDRPGWK Trigger: CTTCCACCCCGGTCTATCTGGATCGTATGGTACCCAGACAGCAGCCCCTGCAGCTGCTGGAAGGAAGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
||
| CDS GCA 72 bp | CTCTTGGATCGATGTAGAGGCTGGTGGCTCTGTCCCTaGGGTAATGACAGCAGCAGCAGCAACCAGGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LLDRCRGWWLCP*GNDSSSSNQAQ Trigger: CTGTGCCTGGTTGCTGCTGCTGCTGTCATTACCGCAGGGACAGAGCCACCAGCCTCTACATCGATCCAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | GGCGGGACGCTTCTCAGCATTGTGAGTTCAGCAGAGTaGCCTTCCCCCTGCTTTGTCCTCAGCATCCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGTLLSIVSSAE*PSPCFVLSIQV Trigger: GACTTGGATGCTGAGGACAAAGCAGGGGGAAGGCCACTCTGCTGAACTCACAATGCTGAGAAGCGTCCCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CCA 72 bp | CCACTCTTCCTTCCAGCAGCTGCAGGGGCTGCTGTCTaGGTACCATACGATCCAGATAGACCTGGGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLFLPAAAGAAV*VPYDPDRPGLK Trigger: CTTCAGCCCAGGTCTATCTGGATCGTATGGTACCCAGACAGCAGCCCCTGCAGCTGCTGGAAGGAAGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108912.9 |
||
| CDS CAA 90 bp | GGGTCTTCCTCCTGCAGTTCCAGGGTGGTGAGAACCCATCTTCTCTaGGATCGATGTAGAGGCTGGTGGCTCTGTCCCTGCGGTAATGAC | + |
|
Preference number: 6 (lower is better) Translates to: GSSSCSSRVVRTHLL*DRCRGWWLCPCGND Trigger: GTCATTACCGCAGGGACAGAGCCACCAGCCTCTACATCGATCCAAGAGAAGATGGGTTCTCACCACCCTGGAACTGCAGGAGGAAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CAA 72 bp | TCCTGCAGTTCCAGGGTGGTGAGAACCCATCTTCTCTaGGATCGATGTAGAGGCTGGTGGCTCTGTCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCSSRVVRTHLL*DRCRGWWLCPC Trigger: GCAGGGACAGAGCCACCAGCCTCTACATCGATCCAAGAGAAGATGGGTTCTCACCACCCTGGAACTGCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CAA 72 bp | GAGGGAGTAGATTTTGAGCCCGAGCAGCCCAGCAACTaGGGGGAGAGGTCCTGCTCCAAGAAGGTTAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EGVDFEPEQPSN*GERSCSKKVRE Trigger: CTCTCTAACCTTCTTGGAGCAGGACCTCTCCCCCAAGTTGCTGGGCTGCTCGGGCTCAAAATCTACTCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
||
| CDS CAA 90 bp | ATTGCTTCAGAGGGAGTAGATTTTGAGCCCGAGCAGCCCAGCAACTaGGGGGAGAGGTCCTGCTCCAAGAAGGTTAGAGAGCTGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: IASEGVDFEPEQPSN*GERSCSKKVRELRV Trigger: GACCCTCAGCTCTCTAACCTTCTTGGAGCAGGACCTCTCCCCCAAGTTGCTGGGCTGCTCGGGCTCAAAATCTACTCCCTCTGAAGCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 72 bp | AGAACCCATCTTCTCTTGGATCGATGTAGAGGCTGGTaGCTCTGTCCCTGCGGTAATGACAGCAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RTHLLLDRCRGW*LCPCGNDSSSS Trigger: GCTGCTGCTGCTGTCATTACCGCAGGGACAGAGCCACCAGCCTCTACATCGATCCAAGAGAAGATGGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 72 bp | GTGAGAACCCATCTTCTCTTGGATCGATGTAGAGGCTaGTGGCTCTGTCCCTGCGGTAATGACAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VRTHLLLDRCRG*WLCPCGNDSSS Trigger: GCTGCTGCTGTCATTACCGCAGGGACAGAGCCACCAGCCTCTACATCGATCCAAGAGAAGATGGGTTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 72 bp | ATTGAAGAGCTCCCCAACCAGTTTAGGAAAGGGCCCTaGGTCTTCCTCCTGCAGTTCCAGGGTGGTGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: IEELPNQFRKGP*VFLLQFQGGEN Trigger: GTTCTCACCACCCTGGAACTGCAGGAGGAAGACCCAGGGCCCTTTCCTAAACTGGTTGGGGAGCTCTTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 72 bp | CATTCACATGAGGGGACTCCCGGTCTATTTGCTTCTTaGTGGTCACCACTCCTGACTTCTCATCCACGGTCA | + |
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Preference number: 6 (lower is better) Translates to: HSHEGTPGLFAS*WSPLLTSHPRS Trigger: TGACCGTGGATGAGAAGTCAGGAGTGGTGACCACCAAGAAGCAAATAGACCGGGAGTCCCCTCATGTGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 72 bp | TCCAAGTGTCGGGAATGGGGCCGGAGGGTTGGAGCATaGTCGTTGACATCAGATAGGAAAAGCATCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SKCREWGRRVGA*SLTSDRKSIRV Trigger: GACTCTGATGCTTTTCCTATCTGATGTCAACGACAATGCTCCAACCCTCCGGCCCCATTCCCGACACTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS TCA 72 bp | CTCCCGGTCTATTTGCTTCTTGGTGGTCACCACTCCTaGCTTCTCATCCACGGTCACCCAATTTTCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: LPVYLLLGGHHS*LLIHGHPIFWI Trigger: GATCCAGAAAATTGGGTGACCGTGGATGAGAAGTCAGGAGTGGTGACCACCAAGAAGCAAATAGACCGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 72 bp | GCTGTCTGGGTACCATACGATCCAGATAGACCGGGGTaGAAGACAGCAAAGTTTTCACTCCTCTTGGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: AVWVPYDPDRPG*KTAKFSLLLAQ Trigger: TTGAGCCAAGAGGAGTGAAAACTTTGCTGTCTTCCACCCCGGTCTATCTGGATCGTATGGTACCCAGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
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| CDS CAA 90 bp | CCTCTTGGCTCAAAGAAAGTGTCACAACCCTGGGCTGAAGGGACTTaGCTTTCCTCGTTATACACAATCAGTGTCTGGTGGCCACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PLGSKKVSQPWAEGT*LSSLYTISVWWPLS Trigger: TGACAGTGGCCACCAGACACTGATTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCCAGGGTTGTGACACTTTCTTTGAGCCAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
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| CDS TCA 72 bp | TCAGCGGGGGAAGGCCGTTGTCAACTGCATGGACGATaGTTGTATAGAAACTGTCATTCACATGAGGGGACT | + |
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Preference number: 6 (lower is better) Translates to: SAGEGRCQLHGR*LYRNCHSHEGT Trigger: AGTCCCCTCATGTGAATGACAGTTTCTATACAATCATCGTCCATGCAGTTGACAACGGCCTTCCCCCGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS GCA 72 bp | CCATACGATCCAGATAGACCTGGGCTGAAGGGACTTTaGTTTCCTCGTTATACACAATCAGTGTCTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: PYDPDRPGLKGL*FPRYTQSVSGG Trigger: GCCACCAGACACTGATTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCCAGGTCTATCTGGATCGTATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108912.9 |
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| CDS CCA 72 bp | AACCAGTTTGTATCTTATCTGGCTGTCAGCCCTGTCTaGGTCTGTAGCATTGAAGTATCCCAGCTGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: NQFVSYLAVSPV*VCSIEVSQLDG Trigger: GCCATCCAGCTGGGATACTTCAATGCTACAGACCCAGACAGGGCTGACAGCCAGATAAGATACAAACTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 72 bp | GTTATACACAATCAGTGTCTGGTGGCCACTGTCACTTaGGATGAAGCCTCTGAGCCTCTTGGGTCCAAATGT | + |
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Preference number: 6 (lower is better) Translates to: VIHNQCLVATVT*DEASEPLGSKC Trigger: ACATTTGGACCCAAGAGGCTCAGAGGCTTCATCCCAAGTGACAGTGGCCACCAGACACTGATTGTGTATAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS TCA 72 bp | TTTGTCCTCAGCATCCAAGTCTCTTCCACGTCTCCCTaGGCATTGTCCAAATCAAAAGTAAAGGGGTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: FVLSIQVSSTSP*ALSKSKVKGSA Trigger: CGCTGACCCCTTTACTTTTGATTTGGACAATGCTCAGGGAGACGTGGAAGAGACTTGGATGCTGAGGACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS TCA 72 bp | CTGTCTGGGTACCATACGATCCAGATAGACCTGGGCTaGAGGGACTTTGCTTTCCTCGTTATACACAATCAG | + |
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Preference number: 6 (lower is better) Translates to: LSGYHTIQIDLG*RDFAFLVIHNQ Trigger: CTGATTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCCAGGTCTATCTGGATCGTATGGTACCCAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108912.9 |
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| CDS GCA 72 bp | CAAAGAAAGTGTCACAACCCTGGGCTGAAGGGACTTTaGTTTCCTCGTTATACACAATCAGTGTCTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QRKCHNPGLKGL*FPRYTQSVSGG Trigger: GCCACCAGACACTGATTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCCAGGGTTGTGACACTTTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
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| CDS TCA 72 bp | GACTTCTCATCCACGGTCACCCAATTTTCTGGATCATaGACCAGTTTGTATCTTATCTGGCTGTCAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: DFSSTVTQFSGS*TSLYLIWLSAL Trigger: CAGGGCTGACAGCCAGATAAGATACAAACTGGTTCATGATCCAGAAAATTGGGTGACCGTGGATGAGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS TCA 72 bp | TCCTCTTGGCTCAAAGAAAGTGTCACAACCCTGGGCTaGAGGGACTTTGCTTTCCTCGTTATACACAATCAG | + |
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Preference number: 6 (lower is better) Translates to: SSWLKESVTTLG*RDFAFLVIHNQ Trigger: CTGATTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCCAGGGTTGTGACACTTTCTTTGAGCCAAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
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| CDS GCA 72 bp | ACAACTTTCCCTGTGGATCGATCTACGGCATCAAAGTaGACCATAAAAGACGGTGTCACTTCTCGATCGACA | + |
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Preference number: 6 (lower is better) Translates to: TTFPVDRSTASK*TIKDGVTSRST Trigger: TGTCGATCGAGAAGTGACACCGTCTTTTATGGTGCACTTTGATGCCGTAGATCGATCCACAGGGAAAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CCA 72 bp | TTCACTCCTCTTGGCTCAAAGAAAGTGTCACAACCCTaGGCTGAAGGGACTTTGCTTTCCTCGTTATACACA | + |
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Preference number: 6 (lower is better) Translates to: FTPLGSKKVSQP*AEGTLLSSLYT Trigger: TGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCCAGGGTTGTGACACTTTCTTTGAGCCAAGAGGAGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
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| CDS CAA 72 bp | TGTTCTCCATGCTGGTGTAAATGGAGAATCTCCATCTaGGACAGGGAGATACAACACACCCTGTTCGACTTG | + |
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Preference number: 6 (lower is better) Translates to: CSPCWCKWRISI*DREIQHTLFDL Trigger: CAAGTCGAACAGGGTGTGTTGTATCTCCCTGTCCAAGATGGAGATTCTCCATTTACACCAGCATGGAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 72 bp | TCAAAGAAAGTGTCACAACCCTGGGCTGAAGGGACTTaGCTTTCCTCGTTATACACAATCAGTGTCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SKKVSQPWAEGT*LSSLYTISVWW Trigger: CCACCAGACACTGATTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCCCAGGGTTGTGACACTTTCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042092.9 |
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| CDS CAA 90 bp | GTTGAATTGTGTTCTCCATGCTGGTGTAAATGGAGAATCTCCATCTaGGACAGGGAGATACAACACACCCTGTTCGACTTGACCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: VELCSPCWCKWRISI*DREIQHTLFDLTFR Trigger: TCTGAAGGTCAAGTCGAACAGGGTGTGTTGTATCTCCCTGTCCAAGATGGAGATTCTCCATTTACACCAGCATGGAGAACACAATTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS GCA 72 bp | CTCGTTGCCATCCCATATGTTGAATTGTGTTCTCCATaGTGGTGTAAATGGAGAATCTCCATCTTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: LVAIPYVELCSP*WCKWRISILDR Trigger: CCTGTCCAAGATGGAGATTCTCCATTTACACCAGCATGGAGAACACAATTCAACATATGGGATGGCAACGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 72 bp | AAAATGGCCCTCCTCGTTGCCATCCCATATGTTGAATaGTGTTCTCCATGCTGGTGTAAATGGAGAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: KMALLVAIPYVE*CSPCWCKWRIS Trigger: GGAGATTCTCCATTTACACCAGCATGGAGAACACAATTCAACATATGGGATGGCAACGAGGAGGGCCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 90 bp | CACAATATCAAAATGGCCCTCCTCGTTGCCATCCCATATGTTGAATaGTGTTCTCCATGCTGGTGTAAATGGAGAATCTCCATCTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: HNIKMALLVAIPYVE*CSPCWCKWRISILD Trigger: GTCCAAGATGGAGATTCTCCATTTACACCAGCATGGAGAACACAATTCAACATATGGGATGGCAACGAGGAGGGCCATTTTGATATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 90 bp | GGTCCTCTGATTAAATATATCAGTGACACATTGTTTGACATATTATaGAAGAGCTCCCCAACCAGTTTAGGAAAGGGCCCTGGGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GPLIKYISDTLFDIL*KSSPTSLGKGPGSS Trigger: GGAAGACCCAGGGCCCTTTCCTAAACTGGTTGGGGAGCTCTTCAATAATATGTCAAACAATGTGTCACTGATATATTTAATCAGAGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 90 bp | TCAGTCACAATATCAAAATGGCCCTCCTCGTTGCCATCCCATATGTaGAATTGTGTTCTCCATGCTGGTGTAAATGGAGAATCTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: SVTISKWPSSLPSHM*NCVLHAGVNGESPS Trigger: AGATGGAGATTCTCCATTTACACCAGCATGGAGAACACAATTCAACATATGGGATGGCAACGAGGAGGGCCATTTTGATATTGTGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 72 bp | TGGGGTGCATGGTCATTCACATCTCTGATTCTAATGTaGAAAATCAGGGATTCATCCACAACTTTCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: WGAWSFTSLILM*KIRDSSTTFPV Trigger: CACAGGGAAAGTTGTGGATGAATCCCTGATTTTCAACATTAGAATCAGAGATGTGAATGACCATGCACCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 72 bp | GCGTTTGAGAGACGAGGAAATAAAGGACTTGAGAGTTaGGAGTGTTTTCTTGGTCCAAATCGACCGTTAACA | + |
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Preference number: 6 (lower is better) Translates to: AFERRGNKGLES*ECFLGPNRPLT Trigger: TGTTAACGGTCGATTTGGACCAAGAAAACACTCCAAACTCTCAAGTCCTTTATTTCCTCGTCTCTCAAACGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 90 bp | TCAGTAATGGCGTTTGAGAGACGAGGAAATAAAGGACTTGAGAGTTaGGAGTGTTTTCTTGGTCCAAATCGACCGTTAACAACTGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: SVMAFERRGNKGLES*ECFLGPNRPLTTEK Trigger: TTTTTCAGTTGTTAACGGTCGATTTGGACCAAGAAAACACTCCAAACTCTCAAGTCCTTTATTTCCTCGTCTCTCAAACGCCATTACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 90 bp | AATTCGTCCACACCAGGTCCTCTGATTAAATATATCAGTGACACATaGTTTGACATATTATTGAAGAGCTCCCCAACCAGTTTAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: NSSTPGPLIKYISDT*FDILLKSSPTSLGK Trigger: CTTTCCTAAACTGGTTGGGGAGCTCTTCAATAATATGTCAAACAATGTGTCACTGATATATTTAATCAGAGGACCTGGTGTGGACGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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| CDS CAA 72 bp | ATTAAATATATCAGTGACACATTGTTTGACATATTATaGAAGAGCTCCCCAACCAGTTTAGGAAAGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: IKYISDTLFDIL*KSSPTSLGKGP Trigger: AGGGCCCTTTCCTAAACTGGTTGGGGAGCTCTTCAATAATATGTCAAACAATGTGTCACTGATATATTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042092.9 ENSMUST00000108912.9 |
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