Pregenerated sensors for CDH24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059674Ensembl transcript IDs: ENSMUST00000067784.8, ENSMUST00000227124.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTCAGTCCACCAGACTCCTCTGTAGTCAGTCCTGGCCACTGACCTaGAGCAGAGCATCTCCTGCAGTAGGGTGGGGCAGCAGTGGCCGG | + |
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Preference number: 1 (lower is better) Translates to: LQSTRLLCSQSWPLT*SRASPAVGWGSSGR Trigger: CCGGCCACTGCTGCCCCACCCTACTGCAGGAGATGCTCTGCTCCAGGTCAGTGGCCAGGACTGACTACAGAGGAGTCTGGTGGACTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| 3UTR CCA 90 bp | TTGGGAGAGTGGCTTCAGTCCACCAGACTCCTCTGTAGTCAGTCCTaGCCACTGACCTGGAGCAGAGCATCTCCTGCAGTAGGGTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: LGEWLQSTRLLCSQS*PLTWSRASPAVGWG Trigger: GCCCCACCCTACTGCAGGAGATGCTCTGCTCCAGGTCAGTGGCCAGGACTGACTACAGAGGAGTCTGGTGGACTGAAGCCACTCTCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| 3UTR TCA 90 bp | CCTAGGAGGTGGGCTGGCTCCCTCCTTCCTTCTACTAGAAGCCGATaGAGCCAGGATGAGGCCATGAGTGATGGATGGAACCATGCGGGC | + |
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Preference number: 1 (lower is better) Translates to: PRRWAGSLLPSTRSR*SQDEAMSDGWNHAG Trigger: GCCCGCATGGTTCCATCCATCACTCATGGCCTCATCCTGGCTTCATCGGCTTCTAGTAGAAGGAAGGAGGGAGCCAGCCCACCTCCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGTCCTGGCCACTGACCTGGAGCAGAGCATCTCCTGCAGTAGGGTGGGGCTGGGCTGCCGCCGCCTaGCTGGACCCTGTGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: SQSWPLTWSRASPAVGWGWAAAA*LDPVGL Trigger: GAGCCCCACAGGGTCCAGGCAGGCGGCGGCAGCCCA...GCCCCACCCTACTGCAGGAGATGCTCTGCTCCAGGTCAGTGGCCAGGACTGACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGGGATCCCTGGAGAAACACACAGACCAAGGAGTGGGAGGTAAGAGGGAGGCTGCCGCCGCCTGCCTaGACCCTGTGGGGCTCACTC | + |
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Preference number: 2 (lower is better) Translates to: DRDPWRNTQTKEWEVRGRLPPPA*TLWGSL Trigger: GAGTGAGCCCCACAGGGTCCAGGCAGGCGGCGGCAG...CCTCCCTCTTACCTCCCACTCCTTGGTCTGTGTGTTTCTCCAGGGATCCCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| 3UTR-3UTR GCA 90 bp | GAATTACGAGACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCATTGGGCCCCTGGGCTaGCGCCGCCTGCCTGGACCC | + |
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Preference number: 2 (lower is better) Translates to: ELRDKNSHRVTVRTEVGGIGPLG*RRLPGP Trigger: GGGTCCAGGCAGGCGGCGGCAGCCCAGGGGCCCAAT...GCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTCTCGTAATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| 3UTR-3UTR CCA 90 bp | GACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCAGTTATAAAGTCATATTGGGCCCCTaGGCTGCCGCCGCCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: DKNSHRVTVRTEVGGSYKVILGP*AAAACL Trigger: CAGGCAGGCGGCGGCAGCCCAGGGGCCCAATATGAC...TTTATAACTGCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| 3UTR CCA 72 bp | GGGTCATATTGGGCCCCTGGGCTGCCGCCGCCTGCCTaGACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: GSYWAPGLPPPA*TLWGSLRGPVC Trigger: GCACACGGGCCCTCTGAGTGAGCCCCACAGGGTCCAGGCAGGCGGCGGCAGCCCAGGGGCCCAATATGACCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| 3UTR GCA 72 bp | AGGAGGGTCATATTGGGCCCCTGGGCTGCCGCCGCCTaGCTGGACCCTGTGGGGCTCACTCAGAGGGCCCGT | + |
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Preference number: 3 (lower is better) Translates to: RRVILGPWAAAA*LDPVGLTQRAR Trigger: ACGGGCCCTCTGAGTGAGCCCCACAGGGTCCAGGCAGGCGGCGGCAGCCCAGGGGCCCAATATGACCCTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| 3UTR CCA 72 bp | GAGACGGCCGTGGGGCTGAAGCTCTTCCCTAGGAGGTaGGCTGGCTCCCTCCTTCCTTCTACTAGAAGCCGA | + |
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Preference number: 3 (lower is better) Translates to: ETAVGLKLFPRR*AGSLLPSTRSR Trigger: TCGGCTTCTAGTAGAAGGAAGGAGGGAGCCAGCCCACCTCCTAGGGAAGAGCTTCAGCCCCACGGCCGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| 3UTR CCA 72 bp | ACCAGACTCCTCTGTAGTCAGTCCTGGCCACTGACCTaGAGCAGAGCATCTCCTGCAGTAGGGTGGGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: TRLLCSQSWPLT*SRASPAVGWGS Trigger: GCTGCCCCACCCTACTGCAGGAGATGCTCTGCTCCAGGTCAGTGGCCAGGACTGACTACAGAGGAGTCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | TGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCAGCGGCAGGTCACCGTGGCAGTGCTaGTCAGGGCTGGCTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: WGSLRGPVCATPPQRSGRSPWQC*SGLAAP Trigger: GGGGGCAGCCAGCCCTGAGCAGCACTGCCACGGTGA...CCTGCCGCTGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCAGGACCCGAGTGTCCCCTaGACCCTGCCCAGGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: DPVGLTQRARVRYPTAAQDPSVP*TLPRLG Trigger: TCCCAGCCTGGGCAGGGTCCAGGGGACACTCGGGTC...CTGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | TGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCAGCGGCAGGCGGTCAGCAGGTACTTaGTGCGGCCCTCACCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: WGSLRGPVCATPPQRSGRRSAGT*CGPHPG Trigger: ACCGGGGTGAGGGCCGCACCAAGTACCTGCTGACCG...CCTGCCGCTGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR TCA 90 bp | GAGGGGGAAAGGAGGGTCATATTGGGCCCCTGGGCTGCCGCCGCCTGCCTGGACGGTAGGTGGCCTGGGTaGAGGCAGGCGGCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EGERRVILGPWAAAACLDGRWPG*RQAALE Trigger: CTCCAGAGCCGCCTGCCTTCACCCAGGCCACCTACC...GTCCAGGCAGGCGGCGGCAGCCCAGGGGCCCAATATGACCCTCCTTTCCCCCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR TCA 90 bp | GACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCAGCCGGTGGGCGATAGCTaGGCCTCAGGCCAGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: DPVGLTQRARVRYPTAAQPVGDS*ASGQQD Trigger: ATCCTGCTGGCCTGAGGCTCAGCTATCGCCCACCGG...CTGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | CCGCCGCCTGCCTGGACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCACAGCTCTGCCAGAGTaGGGAAGAGTGGACCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PPPAWTLWGSLRGPVCATTALPE*GRVDPS Trigger: ACTGGGGTCCACTCTTCCGCACTCTGGCAGAGCTGT...GGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTCCAGGCAGGCGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | GGACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCAGGCCCCATACAGCTCTaGCAGAGTGCGGAAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GPCGAHSEGPCALPHRSAGPIQL*QSAEEW Trigger: CCACTCTTCCGCACTCTGGCAGAGCTGTATGGGGCC...TGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | CCGCCGCCTGCCTGGACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCGCACGGTCCACAGCTTaGGCCAGCAGCACATATTGT | + |
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Preference number: 4 (lower is better) Translates to: PPPAWTLWGSLRGPVCATARSTA*ASSTYC Trigger: ACAATATGTGCTGCTGGCCCAAGCTGTGGACCGTGC...GGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTCCAGGCAGGCGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | CCGCCGCCTGCCTGGACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCTCTCCCGGTCCATGTTaGGGATGGCTGTACGAACCA | + |
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Preference number: 4 (lower is better) Translates to: PPPAWTLWGSLRGPVCATSPGPC*GWLYEP Trigger: TGGTTCGTACAGCCATCCCCAACATGGACCGGGAGA...GGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTCCAGGCAGGCGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR TCA 90 bp | GCTGACAGCTGGGCAGAGACGGCCGTGGGGCTGAAGCTCTTCCCTAGGAGGTGGCCGAGGCCACATCCTTaGAGGGACCTCGCCGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: ADSWAETAVGLKLFPRRWPRPHP*RDLAAD Trigger: ATCTGCGGCGAGGTCCCTTCAAGGATGTGGCCTCGG...CCACCTCCTAGGGAAGAGCTTCAGCCCCACGGCCGTCTCTGCCCAGCTGTCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | CCGCCGCCTGCCTGGACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCACTGTTTCCATAGCTaGGATCGTCGGCATCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PPPAWTLWGSLRGPVCATHCFHS*DRRHRE Trigger: CTCACGATGCCGACGATCCCAGCTATGGAAACAGTG...GGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTCCAGGCAGGCGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | TGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCAGCGGCAGGACCAAGAACTCCTCTTaGGTCTCCCGGTCCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: WGSLRGPVCATPPQRSGRTKNSS*VSRSML Trigger: CAACATGGACCGGGAGACCCAAGAGGAGTTCTTGGT...CCTGCCGCTGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | GGACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCACTTGTTTTCAGGTACTaGCAGGTGGTAGGTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GPCGAHSEGPCALPHRSALVFRY*QVVGGL Trigger: CAGGCCACCTACCACCTGGCAGTACCTGAAAACAAG...TGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR TCA 90 bp | GACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCAGGATGCTGAAGACCTCTaGTCCTTCCCCATTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: DPVGLTQRARVRYPTAAQDAEDL*SFPIQD Trigger: ATCCTGAATGGGGAAGGATCAGAGGTCTTCAGCATC...CTGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR TCA 90 bp | GAGACGGCCGTGGGGCTGAAGCTCTTCCCTAGGAGGTGGGCTGGCTCCCTCCTTGGTTCTGCAAGGCTGTaGTGTCGAAGGCCTCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: ETAVGLKLFPRRWAGSLLGSARL*CRRPPC Trigger: ACACGGAGGCCTTCGACATCACAGCCTTGCAGAACC...AAGGAGGGAGCCAGCCCACCTCCTAGGGAAGAGCTTCAGCCCCACGGCCGTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | TGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCAGCGGCAGGCGGTCAACATCTGAGTaGAGCTTGCCAATAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: WGSLRGPVCATPPQRSGRRSTSE*SLPIRT Trigger: TGTCCTTATTGGCAAGCTGCACTCAGATGTTGACCG...CCTGCCGCTGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | AGTCAGTCCTGGCCACTGACCTGGAGCAGAGCATCTCCTGCAGTAGGGTGGGGCCTCAGGCCAGCAGGATaGCATGGAGCCATCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SQSWPLTWSRASPAVGWGLRPAG*HGAIRP Trigger: CGGCCTGATGGCTCCATGGCATCCTGCTGGCCTGAG...GCCCCACCCTACTGCAGGAGATGCTCTGCTCCAGGTCAGTGGCCAGGACTGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | AGTCAGTCCTGGCCACTGACCTGGAGCAGAGCATCTCCTGCAGTAGGGTGGGGCACATCTCAGGCACGGTaGCATGGTAGGGCCCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SQSWPLTWSRASPAVGWGTSQAR*HGRARG Trigger: CCCTCGGGCCCTACCATGCCACCGTGCCTGAGATGT...GCCCCACCCTACTGCAGGAGATGCTCTGCTCCAGGTCAGTGGCCAGGACTGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | AGTCAGTCCTGGCCACTGACCTGGAGCAGAGCATCTCCTGCAGTAGGGTGGGGCAGCCCGTCCTGGCCCTaGGAGTCTGTGCTGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: SQSWPLTWSRASPAVGWGSPSWP*ESVLML Trigger: CAGCATCAGCACAGACTCCCAGGGCCAGGACGGGCT...GCCCCACCCTACTGCAGGAGATGCTCTGCTCCAGGTCAGTGGCCAGGACTGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | GATGAGGCCATGAGTGATGGATGGAACCATGCGGGCAGGTCTGTAAGGAAGAGACTGCCAGGCGCCCCATaGAGCCCCAGCCACCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: DEAMSDGWNHAGRSVRKRLPGAP*SPSHPA Trigger: GGCTGGGTGGCTGGGGCTGCATGGGGCGCCTGGCAG...TCTCTTCCTTACAGACCTGCCCGCATGGTTCCATCCATCACTCATGGCCTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | GACAGGGATCCCTGGAGAAACACACAGACCAAGGAGTGGGAGGTAAGAGGGAGGGTGTCCCCTGGACCCTaGCCAGGCTGGGACTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DRDPWRNTQTKEWEVRGRVSPGP*PGWDWS Trigger: GCTCCAGTCCCAGCCTGGGCAGGGTCCAGGGGACAC...CCTCCCTCTTACCTCCCACTCCTTGGTCTGTGTGTTTCTCCAGGGATCCCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | TGTAGTCAGTCCTGGCCACTGACCTGGAGCAGAGCATCTCCTGCAGTAGGGTGGCAGTCACCGTGGCAGTaGTGCTCAGGGCTGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CSQSWPLTWSRASPAVGWQSPWQ*CSGLAA Trigger: GGCAGCCAGCCCTGAGCAGCACTGCCACGGTGACTG...CCACCCTACTGCAGGAGATGCTCTGCTCCAGGTCAGTGGCCAGGACTGACTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GCTGACAGCTGGGCAGAGACGGCCGTGGGGCTGAAGCTCTTCCCTAGGAGGTGGTCGCCGCAGATAGGCTaGGTCGATGAGTGTGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: ADSWAETAVGLKLFPRRWSPQIG*VDECVG Trigger: ACCAACACACTCATCGACCCAGCCTATCTGCGGCGA...CCACCTCCTAGGGAAGAGCTTCAGCCCCACGGCCGTCTCTGCCCAGCTGTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GACAGGGATCCCTGGAGAAACACACAGACCAAGGAGTGGGAGGTAAGAGGGAGGGCCAGCAGGATGCCATaGAGCCATCAGGCCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DRDPWRNTQTKEWEVRGRASRMP*SHQAGS Trigger: GCTGCCGGCCTGATGGCTCCATGGCATCCTGCTGGC...CCTCCCTCTTACCTCCCACTCCTTGGTCTGTGTGTTTCTCCAGGGATCCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GATGAGGCCATGAGTGATGGATGGAACCATGCGGGCAGGTCTGTAAGGAAGAGACATACGGGGGCACGCTaGGGTCCTCGTCCGCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: DEAMSDGWNHAGRSVRKRHTGAR*GPRPPR Trigger: GCGAGGCGGACGAGGACCCCAGCGTGCCCCCGTATG...TCTCTTCCTTACAGACCTGCCCGCATGGTTCCATCCATCACTCATGGCCTCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR TCA 90 bp | GACAGGGATCCCTGGAGAAACACACAGACCAAGGAGTGGGAGGTAAGAGGGAGGGGAGGATGGAGTATCTaGTGGGGCTGGCGGGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: DRDPWRNTQTKEWEVRGRGGWSI*WGWRGS Trigger: ACTCCCCCGCCAGCCCCATCAGATACTCCATCCTCC...CCTCCCTCTTACCTCCCACTCCTTGGTCTGTGTGTTTCTCCAGGGATCCCTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GGACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCACATGGATATTGCCTGTaGCCTCATCAATCACAAACA | + |
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Preference number: 4 (lower is better) Translates to: GPCGAHSEGPCALPHRSAHGYCL*PHQSQT Trigger: TGTTTGTGATTGATGAGGCCACAGGCAATATCCATG...TGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GAGACGGCCGTGGGGCTGAAGCTCTTCCCTAGGAGGTGGGCTGGCTCCCTCCTTAGGCTCTTGGTCACATaGATATTGCCTGTGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ETAVGLKLFPRRWAGSLLRLLVT*ILPVAS Trigger: TGAGGCCACAGGCAATATCCATGTGACCAAGAGCCT...AAGGAGGGAGCCAGCCCACCTCCTAGGGAAGAGCTTCAGCCCCACGGCCGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GAGACGGCCGTGGGGCTGAAGCTCTTCCCTAGGAGGTGGGCTGGCTCCCTCCTTCGTCTTCGGGCTCAATaGAGAAGCAACGTTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: ETAVGLKLFPRRWAGSLLRLRAQ*RSNVLD Trigger: ATCCAGAACGTTGCTTCTCCATTGAGCCCGAAGACG...AAGGAGGGAGCCAGCCCACCTCCTAGGGAAGAGCTTCAGCCCCACGGCCGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GATGAGGCCATGAGTGATGGATGGAACCATGCGGGCAGGTCTGTAAGGAAGAGACCTAGGTCTGGGTCCTaGGCCTTAAGCCGGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: DEAMSDGWNHAGRSVRKRPRSGS*ALSRPT Trigger: GGTGGGCCGGCTTAAGGCCCAGGACCCAGACCTAGG...TCTCTTCCTTACAGACCTGCCCGCATGGTTCCATCCATCACTCATGGCCTCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | AGAGTCACAGACAGGGATCCCTGGAGAAACACACAGACCAAGGAGTGGGAGGTACACAAACACAGTGCCTaGCCCCTCCCCGGTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RVTDRDPWRNTQTKEWEVHKHSA*PLPGQQ Trigger: CTGCTGACCGGGGAGGGGGCAGGCACTGTGTTTGTG...TACCTCCCACTCCTTGGTCTGTGTGTTTCTCCAGGGATCCCTGTCTGTGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | GATGAGGCCATGAGTGATGGATGGAACCATGCGGGCAGGTCTGTAAGGAAGAGATCAGCAGGTACTTGGTaGGGCCCTCACCCCGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: DEAMSDGWNHAGRSVRKRSAGTW*GPHPGQ Trigger: TTGACCGGGGTGAGGGCCGCACCAAGTACCTGCTGA...TCTCTTCCTTACAGACCTGCCCGCATGGTTCCATCCATCACTCATGGCCTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | GAGGCCATGAGTGATGGATGGAACCATGCGGGCAGGTCTGTAAGGAAGAGAGAGAGAATGGTGAGGTTGTaGCAGACACGAGCCTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: EAMSDGWNHAGRSVRKRERMVRL*QTRASR Trigger: CCGCGAGGCTCGTGTCTGGCACAACCTCACCATTCT...CTCTCTCTTCCTTACAGACCTGCCCGCATGGTTCCATCCATCACTCATGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GAATTACGAGACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCGTAAGGAGCCCGTCCTaGCCCTGGGAGTCTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ELRDKNSHRVTVRTEVGGVRSPS*PWESVL Trigger: CAGCACAGACTCCCAGGGCCAGGACGGGCTCCTTAC...GCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTCTCGTAATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | AGAGTCACAGACAGGGATCCCTGGAGAAACACACAGACCAAGGAGTGGGAGGTAGAAGGCAGGCGGCTCTaGAGCATCCTGCACAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: RVTDRDPWRNTQTKEWEVEGRRL*SILHSH Trigger: GTGACTGTGCAGGATGCTCCAGAGCCGCCTGCCTTC...TACCTCCCACTCCTTGGTCTGTGTGTTTCTCCAGGGATCCCTGTCTGTGACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | AGAGTCACAGACAGGGATCCCTGGAGAAACACACAGACCAAGGAGTGGGAGGTACATCCAGGGTCTGGATaGCCACTTGCACGCGGGATG | + |
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Preference number: 4 (lower is better) Translates to: RVTDRDPWRNTQTKEWEVHPGSG*PLARGM Trigger: CATCCCGCGTGCAAGTGGCCATCCAGACCCTGGATG...TACCTCCCACTCCTTGGTCTGTGTGTTTCTCCAGGGATCCCTGTCTGTGACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GATGAGGCCATGAGTGATGGATGGAACCATGCGGGCAGGTCTGTAAGGAAGAGACACTCACAGTCACCGTaGCAGTGCTGCTCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DEAMSDGWNHAGRSVRKRHSQSP*QCCSGL Trigger: CAGCCCTGAGCAGCACTGCCACGGTGACTGTGAGTG...TCTCTTCCTTACAGACCTGCCCGCATGGTTCCATCCATCACTCATGGCCTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR TCA 90 bp | GCTGACAGCTGGGCAGAGACGGCCGTGGGGCTGAAGCTCTTCCCTAGGAGGTGGCAGAATATTCCTCAATaGCAAAGAACTGGTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ADSWAETAVGLKLFPRRWQNIPQ*QRTGSR Trigger: TCTGGAACCAGTTCTTTGTCATTGAGGAATATTCTG...CCACCTCCTAGGGAAGAGCTTCAGCCCCACGGCCGTCTCTGCCCAGCTGTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | AGTCAGTCCTGGCCACTGACCTGGAGCAGAGCATCTCCTGCAGTAGGGTGGGGCAGACTTGGCTACTGTTaGCAACTTCATCTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQSWPLTWSRASPAVGWGRLGYC*QLHLCP Trigger: TGGACAGAGATGAAGTTGGCAACAGTAGCCAAGTCT...GCCCCACCCTACTGCAGGAGATGCTCTGCTCCAGGTCAGTGGCCAGGACTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GATGAGGCCATGAGTGATGGATGGAACCATGCGGGCAGGTCTGTAAGGAAGAGAGATGATGAACTCCGATaGGGGTTCCAGGGGCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: DEAMSDGWNHAGRSVRKRDDELR*GFQGPV Trigger: AACCGGCCCCTGGAACCCCCATCGGAGTTCATCATC...TCTCTTCCTTACAGACCTGCCCGCATGGTTCCATCCATCACTCATGGCCTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GAATTACGAGACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCCAGAGTGCGGAAGAGTaGACCCCAGTCGTCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: ELRDKNSHRVTVRTEVGGQSAEE*TPVVQW Trigger: CCACTGGACGACTGGGGTCCACTCTTCCGCACTCTG...GCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTCTCGTAATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | GATGAGGCCATGAGTGATGGATGGAACCATGCGGGCAGGTCTGTAAGGAAGAGAGTCTGGATGGCCACTTaGACGCGGGATGATTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: DEAMSDGWNHAGRSVRKRVWMAT*TRDDCA Trigger: TGCACAATCATCCCGCGTGCAAGTGGCCATCCAGAC...TCTCTTCCTTACAGACCTGCCCGCATGGTTCCATCCATCACTCATGGCCTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | GACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCAGTTATAAAAAGGCTTCCTGCTTCTaGCGCCTCAGGGCCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: DKNSHRVTVRTEVGGSYKKASCF*RLRATK Trigger: CTTCGTGGCCCTGAGGCGGCAGAAGCAGGAAGCCTT...TTTATAACTGCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GAGGCCATGAGTGATGGATGGAACCATGCGGGCAGGTCTGTAAGGAAGAGAGAGATGACCTTAATCAACTaGCCAGGGGCTGCAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EAMSDGWNHAGRSVRKREMTLIN*PGAAES Trigger: TGACTCTGCAGCCCCTGGCCAGTTGATTAAGGTCAT...CTCTCTCTTCCTTACAGACCTGCCCGCATGGTTCCATCCATCACTCATGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | AATCCCTTTCCCTTCTGGGGCCTGAGAAGCACACAAGACAATGCCCAGAGCTGGCCGTGTACACAAGTTTaGCACTGTTTCCATAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NPFPFWGLRSTQDNAQSWPCTQV*HCFHSW Trigger: CCAGCTATGGAAACAGTGCCAAACTTGTGTACACGG...CCAGCTCTGGGCATTGTCTTGTGTGCTTCTCAGGCCCCAGAAGGGAAAGGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | GACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCAGTTATAAAGCTCCATCCGGGTTCTaGAAGGCTGTGATGTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: DKNSHRVTVRTEVGGSYKAPSGF*KAVMSK Trigger: CTTCGACATCACAGCCTTGCAGAACCCGGATGGAGC...TTTATAACTGCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCAGTTATAAAGGTCCATGTTGGGGATaGCTGTACGAACCACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: DKNSHRVTVRTEVGGSYKGPCWG*LYEPLQ Trigger: CTGGAGTGGTTCGTACAGCCATCCCCAACATGGACC...TTTATAACTGCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCAGTTATAAACGTTCTGGATCCGAGTaGGGGAGGATGGAGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DKNSHRVTVRTEVGGSYKRSGSE*GRMEYL Trigger: CAGATACTCCATCCTCCCCCACTCGGATCCAGAACG...TTTATAACTGCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CCA 90 bp | GACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCAGTTATAAAGGAGAAGCAACGTTCTaGATCCGAGTGGGGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: DKNSHRVTVRTEVGGSYKGEATF*IRVGED Trigger: ATCCTCCCCCACTCGGATCCAGAACGTTGCTTCTCC...TTTATAACTGCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR TCA 90 bp | GACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCAGTTATAAACCCATATCCTTGGCTTaGATCACCACCAAGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: DKNSHRVTVRTEVGGSYKPISLA*ITTKNS Trigger: GGAGTTCTTGGTGGTGATTCAAGCCAAGGATATGGG...TTTATAACTGCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR TCA 90 bp | AACAAACAAACAAACCACAACAGACAAACCCAAAAAGCCAGTCACAGGGACTCAGATAGGCTGGGTCGATaGGTGTGTTGGTGGCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: NKQTNHNRQTQKASHRDSDRLGR*VCWWLL Trigger: TAGAAGCCACCAACACACTCATCGACCCAGCCTATC...TGAGTCCCTGTGACTGGCTTTTTGGGTTTGTCTGTTGTGGTTTGTTTGTTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR GCA 90 bp | AACAAACAAACAAACCACAACAGACAAACCCAAAAAGCCAGTCACAGGGACTCATGGTCACATGGATATTaGCTGTGGCCTCATCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: NKQTNHNRQTQKASHRDSWSHGY*LWPHQS Trigger: TGATTGATGAGGCCACAGGCAATATCCATGTGACCA...TGAGTCCCTGTGACTGGCTTTTTGGGTTTGTCTGTTGTGGTTTGTTTGTTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 90 bp | GCGCAGCCGCAACGCCAGCAACTGCACCACATCGGCGGGGCCGGGTaGCCTGGGCTGGCGTGGCGCTCGGGTCCGCGGCAGCACGTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: AQPQRQQLHHIGGAG*PGLAWRSGPRQHVA Trigger: CGCGACGTGCTGCCGCGGACCCGAGCGCCACGCCAGCCCAGGCCACCCGGCCCCGCCGATGTGGTGCAGTTGCTGGCGTTGCGGCTGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 90 bp | AACGCCAGCAACTGCACCACATCGGCGGGGCCGGGTGGCCTGGGCTaGCGTGGCGCTCGGGTCCGCGGCAGCACGTCGCGGCGTACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: NASNCTTSAGPGGLG*RGARVRGSTSRRTG Trigger: GCCGGTACGCCGCGACGTGCTGCCGCGGACCCGAGCGCCACGCCAGCCCAGGCCACCCGGCCCCGCCGATGTGGTGCAGTTGCTGGCGTT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 90 bp | CGCTCGGGTCCGCGGCAGCACGTCGCGGCGTACCGGCGGGCCGGCTaGTGGAGGAGCGGCTCCATCCGGGTTCTGCAAGGCTGTGATGTC | + |
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Preference number: 5 (lower is better) Translates to: RSGPRQHVAAYRRAG*WRSGSIRVLQGCDV Trigger: GACATCACAGCCTTGCAGAACCCGGATGGAGCCGCTCCTCCAGCAGCCGGCCCGCCGGTACGCCGCGACGTGCTGCCGCGGACCCGAGCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 90 bp | TCGGGTCCGCGGCAGCACGTCGCGGCGTACCGGCGGGCCGGCTGCTaGAGGAGCGGCTCCATCCGGGTTCTGCAAGGCTGTGATGTCGAA | + |
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Preference number: 5 (lower is better) Translates to: SGPRQHVAAYRRAGC*RSGSIRVLQGCDVE Trigger: TTCGACATCACAGCCTTGCAGAACCCGGATGGAGCCGCTCCTCCAGCAGCCGGCCCGCCGGTACGCCGCGACGTGCTGCCGCGGACCCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CAA 90 bp | GAGGGGGAAAGGAGGGTCATATTGGGCCCCTGGGCTGCCGCCGCCTGCCTGGACCCGGTCAGCAGGTACTaGGTGCGGCCCTCACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EGERRVILGPWAAAACLDPVSRY*VRPSPR Trigger: CCGGGGTGAGGGCCGCACCAAGTACCTGCTGACCGG...GTCCAGGCAGGCGGCGGCAGCCCAGGGGCCCAATATGACCCTCCTTTCCCCCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CAA 90 bp | TGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCCCACCGCAGCGCAGCGGCAGGGTCTCCCGGTCCATGTaGGGGATGGCTGTACGAACC | + |
|
Preference number: 5 (lower is better) Translates to: WGSLRGPVCATPPQRSGRVSRSM*GMAVRT Trigger: GGTTCGTACAGCCATCCCCAACATGGACCGGGAGAC...CCTGCCGCTGCGCTGCGGTGGGGTAGCGCACACGGGCCCTCTGAGTGAGCCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 90 bp | CCATGGAGCCATCAGGCCGGCAGCGACACACACTCACAGTCACCGTaGCAGTGCTGCTCAGGGCTGGCTGCCCCCAATCCCAGAGTTCGA | + |
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Preference number: 5 (lower is better) Translates to: PWSHQAGSDTHSQSP*QCCSGLAAPNPRVR Trigger: TCGAACTCTGGGATTGGGGGCAGCCAGCCCTGAGCAGCACTGCCACGGTGACTGTGAGTGTGTGTCGCTGCCGGCCTGATGGCTCCATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067784.8 ENSMUST00000227124.2 |
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| CDS-3UTR CAA 90 bp | CCGCCGCCTGCCTGGACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCATCGTGAGCAGTCACTaGGATTACAGACGTCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: PPPAWTLWGSLRGPVCATIVSSH*DYRRPN Trigger: GTTGGGACGTCTGTAATCCAAGTGACTGCTCACGAT...GGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTCCAGGCAGGCGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CAA 90 bp | CCGCCGCCTGCCTGGACCCTGTGGGGCTCACTCAGAGGGCCCGTGTGCGCTACCACCTTGAAGGGAGACTaGGCTACTGTTGCCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: PPPAWTLWGSLRGPVCATTLKGD*ATVANF Trigger: GAAGTTGGCAACAGTAGCCAAGTCTCCCTTCAAGGT...GGTAGCGCACACGGGCCCTCTGAGTGAGCCCCACAGGGTCCAGGCAGGCGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 90 bp | TCGCGGACGTCCTCCTCCTCCAGTACCATCAAGGCTTCCTGCTTCTaGCGCCTCAGGGCCACGAAGAGAACCACCAGGGCAAGAAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SRTSSSSSTIKASCF*RLRATKRTTRARRV Trigger: CACCCTTCTTGCCCTGGTGGTTCTCTTCGTGGCCCTGAGGCGGCAGAAGCAGGAAGCCTTGATGGTACTGGAGGAGGAGGACGTCCGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 90 bp | TCCGATGGGGGTTCCAGGGGCCGGTTAGAGGCACGGTCCACAGCTTaGGCCAGCAGCACATATTGTGCCTTCTCTTCCCGATCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SDGGSRGRLEARSTA*ASSTYCAFSSRSRL Trigger: GAGCCTGGATCGGGAAGAGAAGGCACAATATGTGCTGCTGGCCCAAGCTGTGGACCGTGCCTCTAACCGGCCCCTGGAACCCCCATCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CAA 90 bp | GAGACGGCCGTGGGGCTGAAGCTCTTCCCTAGGAGGTGGGCTGGCTCCCTCCTTCACCAAGAACTCCTCTaGGGTCTCCCGGTCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: ETAVGLKLFPRRWAGSLLHQELL*GLPVHV Trigger: AACATGGACCGGGAGACCCAAGAGGAGTTCTTGGTG...AAGGAGGGAGCCAGCCCACCTCCTAGGGAAGAGCTTCAGCCCCACGGCCGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS TCA 90 bp | CGCGGGATGATTGTGCAGAGCTATCCAACTCTGTGGCCAGAATGGTaGGGTTGTGCCAGACACGAGCCTCGCGGTCCAGGCGCACTGCTG | + |
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Preference number: 5 (lower is better) Translates to: RGMIVQSYPTLWPEW*GCARHEPRGPGALL Trigger: CAGCAGTGCGCCTGGACCGCGAGGCTCGTGTCTGGCACAACCTCACCATTCTGGCCACAGAGTTGGATAGCTCTGCACAATCATCCCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 90 bp | AGGATGCTGTATGCCACGAGAGCATTATCCCCTAGGTCTGGGTCCTaGGCCTTAAGCCGGCCCACCAGGGTTCCAGGTCCAGCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RMLYATRALSPRSGS*ALSRPTRVPGPAVS Trigger: GGAGACAGCTGGACCTGGAACCCTGGTGGGCCGGCTTAAGGCCCAGGACCCAGACCTAGGGGATAATGCTCTCGTGGCATACAGCATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 90 bp | AATGGTGAGGTTGTGCCAGACACGAGCCTCGCGGTCCAGGCGCACTaGTGTACGGATAGTGCCGTCTTCGGGCTCAATGGAGAAGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: NGEVVPDTSLAVQAH*CTDSAVFGLNGEAT Trigger: CGTTGCTTCTCCATTGAGCCCGAAGACGGCACTATCCGTACAGCAGTGCGCCTGGACCGCGAGGCTCGTGTCTGGCACAACCTCACCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 90 bp | ATGTTCTCGCGGACGTCCTCCTCCTCCAGTACCATCAAGGCTTCCTaGTTCTGCCGCCTCAGGGCCACGAAGAGAACCACCAGGGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MFSRTSSSSSTIKAS*FCRLRATKRTTRAR Trigger: TCTTGCCCTGGTGGTTCTCTTCGTGGCCCTGAGGCGGCAGAAGCAGGAAGCCTTGATGGTACTGGAGGAGGAGGACGTCCGCGAGAACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 90 bp | TGGTCACATGGATATTGCCTGTGGCCTCATCAATCACAAACACAGTaGCTGCCCCCTCCCCGGTCAGCAGGTACTTGGTGCGGCCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: WSHGYCLWPHQSQTQ*LPPPRSAGTWCGPH Trigger: GTGAGGGCCGCACCAAGTACCTGCTGACCGGGGAGGGGGCAGGCACTGTGTTTGTGATTGATGAGGCCACAGGCAATATCCATGTGACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 90 bp | TGTACGGATAGTGCCGTCTTCGGGCTCAATGGAGAAGCAACGTTCTaGATCCGAGTGGGGGAGGATGGAGTATCTGATGGGGCTGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTDSAVFGLNGEATF*IRVGEDGVSDGAGG Trigger: CCCGCCAGCCCCATCAGATACTCCATCCTCCCCCACTCGGATCCAGAACGTTGCTTCTCCATTGAGCCCGAAGACGGCACTATCCGTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 90 bp | GATTGTGCAGAGCTATCCAACTCTGTGGCCAGAATGGTGAGGTTGTaGCAGACACGAGCCTCGCGGTCCAGGCGCACTGCTGTACGGATA | + |
|
Preference number: 5 (lower is better) Translates to: DCAELSNSVARMVRL*QTRASRSRRTAVRI Trigger: TATCCGTACAGCAGTGCGCCTGGACCGCGAGGCTCGTGTCTGGCACAACCTCACCATTCTGGCCACAGAGTTGGATAGCTCTGCACAATC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 90 bp | CCGGTTAGAGGCACGGTCCACAGCTTGGGCCAGCAGCACATATTGTaGCTTCTCTTCCCGATCCAGGCTCTTGGTCACATGGATATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVRGTVHSLGQQHIL*LLFPIQALGHMDIA Trigger: GGCAATATCCATGTGACCAAGAGCCTGGATCGGGAAGAGAAGGCACAATATGTGCTGCTGGCCCAAGCTGTGGACCGTGCCTCTAACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 90 bp | CTTGAATCACCACCAAGAACTCCTCTTGGGTCTCCCGGTCCATGTTaGGGATGGCTGTACGAACCACTCCAGTCTGGGGGTCCACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LESPPRTPLGSPGPC*GWLYEPLQSGGPQR Trigger: TCTCTGTGGACCCCCAGACTGGAGTGGTTCGTACAGCCATCCCCAACATGGACCGGGAGACCCAAGAGGAGTTCTTGGTGGTGATTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 90 bp | TCGTACCGAGGCCACATCCTTGAAGGGACCTCGCCGCAGATAGGCTaGGTCGATGAGTGTGTTGGTGGCTTCTACACGGAAGGTGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SYRGHILEGTSPQIG*VDECVGGFYTEGVR Trigger: TCTTACACCTTCCGTGTAGAAGCCACCAACACACTCATCGACCCAGCCTATCTGCGGCGAGGTCCCTTCAAGGATGTGGCCTCGGTACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CAA 90 bp | TGTAGTCAGTCCTGGCCACTGACCTGGAGCAGAGCATCTCCTGCAGTAGGGTGGACATCTGAGTGCAGCTaGCCAATAAGGACAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSQSWPLTWSRASPAVGWTSECS*PIRTGS Trigger: AGAGCCTGTCCTTATTGGCAAGCTGCACTCAGATGT...CCACCCTACTGCAGGAGATGCTCTGCTCCAGGTCAGTGGCCAGGACTGACTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CAA 90 bp | AGAGTCACAGACAGGGATCCCTGGAGAAACACACAGACCAAGGAGTGGGAGGTATCCCGGACTGTAAAGTaGGCATCAGGGCCCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RVTDRDPWRNTQTKEWEVSRTVK*ASGPTG Trigger: TCCTGTGGGCCCTGATGCCAACTTTACAGTCCGGGA...TACCTCCCACTCCTTGGTCTGTGTGTTTCTCCAGGGATCCCTGTCTGTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS TCA 90 bp | CGGTTGTCCCGGACTGTAAAGTTGGCATCAGGGCCCACAGGACCTTaGAGGGAGACTTGGCTACTGTTGCCAACTTCATCTCTGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLSRTVKLASGPTGP*RETWLLLPTSSLSR Trigger: TCTGGACAGAGATGAAGTTGGCAACAGTAGCCAAGTCTCCCTTCAAGGTCCTGTGGGCCCTGATGCCAACTTTACAGTCCGGGACAACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067784.8 ENSMUST00000227124.2 |
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| CDS-3UTR CAA 90 bp | GACAAAAACAGCCACAGAGTCACAGTGAGAACAGAGGTCGGGGGCAGTTATAAAGGCACGGTCCACAGCTaGGGCCAGCAGCACATATTG | + |
|
Preference number: 5 (lower is better) Translates to: DKNSHRVTVRTEVGGSYKGTVHS*GQQHIL Trigger: CAATATGTGCTGCTGGCCCAAGCTGTGGACCGTGCC...TTTATAACTGCCCCCGACCTCTGTTCTCACTGTGACTCTGTGGCTGTTTTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CAA 90 bp | AATCCCTTTCCCTTCTGGGGCCTGAGAAGCACACAAGACAATGCCCAGAGCTGGTTGGTCACATGGATATaGCCTGTGGCCTCATCAATC | + |
|
Preference number: 5 (lower is better) Translates to: NPFPFWGLRSTQDNAQSWLVTWI*PVASSI Trigger: GATTGATGAGGCCACAGGCAATATCCATGTGACCAA...CCAGCTCTGGGCATTGTCTTGTGTGCTTCTCAGGCCCCAGAAGGGAAAGGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS-3UTR CAA 90 bp | AACAAACAAACAAACCACAACAGACAAACCCAAAAAGCCAGTCACAGGGACTCAAGGGTTCCAGGGGCCTaGTTTTCAGGTACTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NKQTNHNRQTQKASHRDSRVPGA*FSGTAR Trigger: CCTGGCAGTACCTGAAAACAAGGCCCCTGGAACCCT...TGAGTCCCTGTGACTGGCTTTTTGGGTTTGTCTGTTGTGGTTTGTTTGTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | AACTGCACCACATCGGCGGGGCCGGGTGGCCTGGGCTaGCGTGGCGCTCGGGTCCGCGGCAGCACGTCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: NCTTSAGPGGLG*RGARVRGSTSR Trigger: CCGCGACGTGCTGCCGCGGACCCGAGCGCCACGCCAGCCCAGGCCACCCGGCCCCGCCGATGTGGTGCAGTT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | CCAGCAACTGCACCACATCGGCGGGGCCGGGTGGCCTaGGCTGGCGTGGCGCTCGGGTCCGCGGCAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: PATAPHRRGRVA*AGVALGSAAAR Trigger: ACGTGCTGCCGCGGACCCGAGCGCCACGCCAGCCCAGGCCACCCGGCCCCGCCGATGTGGTGCAGTTGCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | CAACGCCAGCAACTGCACCACATCGGCGGGGCCGGGTaGCCTGGGCTGGCGTGGCGCTCGGGTCCGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QRQQLHHIGGAG*PGLAWRSGPRQ Trigger: CTGCCGCGGACCCGAGCGCCACGCCAGCCCAGGCCACCCGGCCCCGCCGATGTGGTGCAGTTGCTGGCGTTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | CGGCAGCACGTCGCGGCGTACCGGCGGGCCGGCTGCTaGAGGAGCGGCTCCATCCGGGTTCTGCAAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RQHVAAYRRAGC*RSGSIRVLQGC Trigger: ACAGCCTTGCAGAACCCGGATGGAGCCGCTCCTCCAGCAGCCGGCCCGCCGGTACGCCGCGACGTGCTGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 72 bp | CCGCAGCAGTGTAGGACCCGAGTGTCCCCTGGACCCTaGCCAGGCTGGGACTGGAGCTGCCAGGCGCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: PQQCRTRVSPGP*PGWDWSCQAPH Trigger: ATGGGGCGCCTGGCAGCTCCAGTCCCAGCCTGGGCAGGGTCCAGGGGACACTCGGGTCCTACACTGCTGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | AGCCGTACACCTGCACCGAGTCATACGGGGGCACGCTaGGGTCCTCGTCCGCCTCGCGCAGCCGCAACGCCA | + |
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Preference number: 6 (lower is better) Translates to: SRTPAPSHTGAR*GPRPPRAAATP Trigger: TGGCGTTGCGGCTGCGCGAGGCGGACGAGGACCCCAGCGTGCCCCCGTATGACTCGGTGCAGGTGTACGGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | CATCAGGCCGGCAGCGACACACACTCACAGTCACCGTaGCAGTGCTGCTCAGGGCTGGCTGCCCCCAATCCC | + |
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Preference number: 6 (lower is better) Translates to: HQAGSDTHSQSP*QCCSGLAAPNP Trigger: GGGATTGGGGGCAGCCAGCCCTGAGCAGCACTGCCACGGTGACTGTGAGTGTGTGTCGCTGCCGGCCTGATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067784.8 ENSMUST00000227124.2 |
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| CDS GCA 72 bp | GCCGGCAGCGACACACACTCACAGTCACCGTGGCAGTaGTGCTCAGGGCTGGCTGCCCCCAATCCCAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: AGSDTHSQSPWQ*CSGLAAPNPRV Trigger: AACTCTGGGATTGGGGGCAGCCAGCCCTGAGCAGCACTGCCACGGTGACTGTGAGTGTGTGTCGCTGCCGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067784.8 ENSMUST00000227124.2 |
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| CDS TCA 72 bp | AGCAGGGCTCCAGTGCTGAGACCGGTGGGCGATAGCTaGGCCTCAGGCCAGCAGGATGCCATGGAGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: SRAPVLRPVGDS*ASGQQDAMEPS Trigger: TGATGGCTCCATGGCATCCTGCTGGCCTGAGGCTCAGCTATCGCCCACCGGTCTCAGCACTGGAGCCCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067784.8 ENSMUST00000227124.2 |
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| CDS CCA 72 bp | TGGGCGATAGCTGAGCCTCAGGCCAGCAGGATGCCATaGAGCCATCAGGCCGGCAGCGACACACACTCACAG | + |
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Preference number: 6 (lower is better) Translates to: WAIAEPQASRMP*SHQAGSDTHSQ Trigger: CTGTGAGTGTGTGTCGCTGCCGGCCTGATGGCTCCATGGCATCCTGCTGGCCTGAGGCTCAGCTATCGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067784.8 ENSMUST00000227124.2 |
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| CDS CAA 90 bp | CTCCGATGGGGGTTCCAGGGGCCGGTTAGAGGCACGGTCCACAGCTaGGGCCAGCAGCACATATTGTGCCTTCTCTTCCCGATCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LRWGFQGPVRGTVHS*GQQHILCLLFPIQA Trigger: AGCCTGGATCGGGAAGAGAAGGCACAATATGTGCTGCTGGCCCAAGCTGTGGACCGTGCCTCTAACCGGCCCCTGGAACCCCCATCGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 72 bp | GTTGTGCCAGACACGAGCCTCGCGGTCCAGGCGCACTaGTGTACGGATAGTGCCGTCTTCGGGCTCAATGGA | + |
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Preference number: 6 (lower is better) Translates to: VVPDTSLAVQAH*CTDSAVFGLNG Trigger: TCCATTGAGCCCGAAGACGGCACTATCCGTACAGCAGTGCGCCTGGACCGCGAGGCTCGTGTCTGGCACAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 72 bp | ATTGCCTGTGGCCTCATCAATCACAAACACAGTGCCTaGCCCCTCCCCGGTCAGCAGGTACTTGGTGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: IACGLINHKHSA*PLPGQQVLGAA Trigger: GGCCGCACCAAGTACCTGCTGACCGGGGAGGGGGCAGGCACTGTGTTTGTGATTGATGAGGCCACAGGCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 72 bp | TCCTCCTCCTCCAGTACCATCAAGGCTTCCTGCTTCTaGCGCCTCAGGGCCACGAAGAGAACCACCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSSSSTIKASCF*RLRATKRTTRA Trigger: TGCCCTGGTGGTTCTCTTCGTGGCCCTGAGGCGGCAGAAGCAGGAAGCCTTGATGGTACTGGAGGAGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | TATGCCACGAGAGCATTATCCCCTAGGTCTGGGTCCTaGGCCTTAAGCCGGCCCACCAGGGTTCCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: YATRALSPRSGS*ALSRPTRVPGP Trigger: TGGACCTGGAACCCTGGTGGGCCGGCTTAAGGCCCAGGACCCAGACCTAGGGGATAATGCTCTCGTGGCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | TCGGGCTCAATGGAGAAGCAACGTTCTGGATCCGAGTaGGGGAGGATGGAGTATCTGATGGGGCTGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: SGSMEKQRSGSE*GRMEYLMGLAG Trigger: CCCCGCCAGCCCCATCAGATACTCCATCCTCCCCCACTCGGATCCAGAACGTTGCTTCTCCATTGAGCCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CAA 72 bp | GCAGAGCTATCCAACTCTGTGGCCAGAATGGTGAGGTaGTGCCAGACACGAGCCTCGCGGTCCAGGCGCACT | + |
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Preference number: 6 (lower is better) Translates to: AELSNSVARMVR*CQTRASRSRRT Trigger: AGTGCGCCTGGACCGCGAGGCTCGTGTCTGGCACAACCTCACCATTCTGGCCACAGAGTTGGATAGCTCTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | CCACCAAGAACTCCTCTTGGGTCTCCCGGTCCATGTTaGGGATGGCTGTACGAACCACTCCAGTCTGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PPRTPLGSPGPC*GWLYEPLQSGG Trigger: ACCCCCAGACTGGAGTGGTTCGTACAGCCATCCCCAACATGGACCGGGAGACCCAAGAGGAGTTCTTGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CAA 72 bp | ACCACCAAGAACTCCTCTTGGGTCTCCCGGTCCATGTaGGGGATGGCTGTACGAACCACTCCAGTCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: TTKNSSWVSRSM*GMAVRTTPVWG Trigger: CCCCCAGACTGGAGTGGTTCGTACAGCCATCCCCAACATGGACCGGGAGACCCAAGAGGAGTTCTTGGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CAA 90 bp | GATGATTGTGCAGAGCTATCCAACTCTGTGGCCAGAATGGTGAGGTaGTGCCAGACACGAGCCTCGCGGTCCAGGCGCACTGCTGTACGG | + |
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Preference number: 6 (lower is better) Translates to: DDCAELSNSVARMVR*CQTRASRSRRTAVR Trigger: CCGTACAGCAGTGCGCCTGGACCGCGAGGCTCGTGTCTGGCACAACCTCACCATTCTGGCCACAGAGTTGGATAGCTCTGCACAATCATC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS TCA 72 bp | ATTGTGCAGAGCTATCCAACTCTGTGGCCAGAATGGTaGGGTTGTGCCAGACACGAGCCTCGCGGTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: IVQSYPTLWPEW*GCARHEPRGPG Trigger: GCCTGGACCGCGAGGCTCGTGTCTGGCACAACCTCACCATTCTGGCCACAGAGTTGGATAGCTCTGCACAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | GGCCACATCCTTGAAGGGACCTCGCCGCAGATAGGCTaGGTCGATGAGTGTGTTGGTGGCTTCTACACGGAA | + |
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Preference number: 6 (lower is better) Translates to: GHILEGTSPQIG*VDECVGGFYTE Trigger: TTCCGTGTAGAAGCCACCAACACACTCATCGACCCAGCCTATCTGCGGCGAGGTCCCTTCAAGGATGTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067784.8 ENSMUST00000227124.2 |
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| CDS CAA 90 bp | GGGCCGGTTAGAGGCACGGTCCACAGCTTGGGCCAGCAGCACATATaGTGCCTTCTCTTCCCGATCCAGGCTCTTGGTCACATGGATATT | + |
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Preference number: 6 (lower is better) Translates to: GPVRGTVHSLGQQHI*CLLFPIQALGHMDI Trigger: AATATCCATGTGACCAAGAGCCTGGATCGGGAAGAGAAGGCACAATATGTGCTGCTGGCCCAAGCTGTGGACCGTGCCTCTAACCGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CCA 72 bp | AGTGCCGTCTTCGGGCTCAATGGAGAAGCAACGTTCTaGATCCGAGTGGGGGAGGATGGAGTATCTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: SAVFGLNGEATF*IRVGEDGVSDG Trigger: CCCATCAGATACTCCATCCTCCCCCACTCGGATCCAGAACGTTGCTTCTCCATTGAGCCCGAAGACGGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 72 bp | GCATTGTCATTTTCATCCAGGGTCTGGATGGCCACTTaGACGCGGGATGATTGTGCAGAGCTGATGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ALSFSSRVWMAT*TRDDCAELMGL Trigger: CAGCCCCATCAGCTCTGCACAATCATCCCGCGTGCAAGTGGCCATCCAGACCCTGGATGAAAATGACAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227124.2 |
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| CDS CAA 72 bp | GTTGGCATCAGGGCCCACAGGACCTTGAAGGGAGACTaGGCTACTGTTGCCAACTTCATCTCTGTCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: VGIRAHRTLKGD*ATVANFISVQS Trigger: GCTCTGGACAGAGATGAAGTTGGCAACAGTAGCCAAGTCTCCCTTCAAGGTCCTGTGGGCCCTGATGCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067784.8 ENSMUST00000227124.2 |
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| CDS CAA 90 bp | TCGGTTGTCCCGGACTGTAAAGTTGGCATCAGGGCCCACAGGACCTaGAAGGGAGACTTGGCTACTGTTGCCAACTTCATCTCTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SVVPDCKVGIRAHRT*KGDLATVANFISVQ Trigger: CTGGACAGAGATGAAGTTGGCAACAGTAGCCAAGTCTCCCTTCAAGGTCCTGTGGGCCCTGATGCCAACTTTACAGTCCGGGACAACCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067784.8 ENSMUST00000227124.2 |
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| CDS TCA 72 bp | CGGACTGTAAAGTTGGCATCAGGGCCCACAGGACCTTaGAGGGAGACTTGGCTACTGTTGCCAACTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: RTVKLASGPTGP*RETWLLLPTSS Trigger: AGATGAAGTTGGCAACAGTAGCCAAGTCTCCCTTCAAGGTCCTGTGGGCCCTGATGCCAACTTTACAGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067784.8 ENSMUST00000227124.2 |
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| CDS CAA 72 bp | TCCATAGCTGGGATCGTCGGCATCGTGAGCAGTCACTaGGATTACAGACGTCCCAACATTGGACATCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SIAGIVGIVSSH*DYRRPNIGHLR Trigger: CCTGAGATGTCCAATGTTGGGACGTCTGTAATCCAAGTGACTGCTCACGATGCCGACGATCCCAGCTATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS GCA 72 bp | GCATTGTCATTTTCATCCAGGGTCTGGATGGCCACTTaGACGCGGGATGATTGTGCAGAGCTATCCAACTCT | + |
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Preference number: 6 (lower is better) Translates to: ALSFSSRVWMAT*TRDDCAELSNS Trigger: AGAGTTGGATAGCTCTGCACAATCATCCCGCGTGCAAGTGGCCATCCAGACCCTGGATGAAAATGACAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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| CDS CAA 72 bp | AGCACATATTGTGCCTTCTCTTCCCGATCCAGGCTCTaGGTCACATGGATATTGCCTGTGGCCTCATCAATC | + |
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Preference number: 6 (lower is better) Translates to: STYCAFSSRSRL*VTWILPVASSI Trigger: GATTGATGAGGCCACAGGCAATATCCATGTGACCAAGAGCCTGGATCGGGAAGAGAAGGCACAATATGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067784.8 |
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