Pregenerated sensors for CDH22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053166Ensembl transcript IDs: ENSMUST00000065438.13, ENSMUST00000138643.2
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGGCCCGCTGTCCACAACGAGGATGGGCAGGAGGAACACGTCCTaGTCTTGCCGGTTGAAGCCCACGTGCTGCGTGTGCACCGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: GGPLSTTRMGRRNTS*SCRLKPTCCVCTAA Trigger: AGCTGCGGTGCACACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGACGTGTTCCTCCTGCCCATCCTCGTTGTGGACAGCGGGCCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR CCA 90 bp | GGGCTGAGGGAGGCAGCCATGACAAAGGCGGTGGTGTTGCAGGACTaGATGGTACCGGAGCTGTCACAGCCGCAGATGCGGATGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: GLREAAMTKAVVLQD*MVPELSQPQMRMVR Trigger: CCTCACCATCCGCATCTGCGGCTGTGACAGCTCCGGTACCATCCAGTCCTGCAACACCACCGCCTTTGTCATGGCTGCCTCCCTCAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR GCA 90 bp | CCGCTGTCCACAACGAGGATGGGCAGGAGGAACACGTCCTGCTCTTaGCGGTTGAAGCCCACGTGCTGCGTGTGCACCGCAGCTGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: PLSTTRMGRRNTSCS*RLKPTCCVCTAAVL Trigger: TAACACAGCTGCGGTGCACACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGACGTGTTCCTCCTGCCCATCCTCGTTGTGGACAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR CCA 90 bp | TGTGCCAGCCAGCGGTTTCACGGTCCAGCCCCTTGCCAGTCACGATaGCACCAGTGTCCGCATCGATGTCAAAGATCTGCTCCAAATCCG | + |
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Preference number: 1 (lower is better) Translates to: CASQRFHGPAPCQSR*HQCPHRCQRSAPNP Trigger: CGGATTTGGAGCAGATCTTTGACATCGATGCGGACACTGGTGCCATCGTGACTGGCAAGGGGCTGGACCGTGAAACCGCTGGCTGGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR CCA 90 bp | CCAGCCCTTCCTTCATCTTTAATTGGATGCCAGAAAGCCTTGGGGTaGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATTGTC | + |
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Preference number: 1 (lower is better) Translates to: PALPSSLIGCQKALG*AWQQRPPLLSPPIV Trigger: GACAATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCAAGGCTTTCTGGCATCCAATTAAAGATGAAGGAAGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR CCA 90 bp | CTTCCTTCATCTTTAATTGGATGCCAGAAAGCCTTGGGGTGGGCATaGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATTGTCCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: LPSSLIGCQKALGWA*QQRPPLLSPPIVLS Trigger: GGAAAGGACAATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCAAGGCTTTCTGGCATCCAATTAAAGATGAAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR CCA 90 bp | ATCTTCAATGTCCAGCAGAGAGAAATGAGGGTTGCTAGGTGCTTCTaGTACCAGACGGAAATAGAAGCGGTGGCCGCCCTGGGGCTCGTC | + |
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Preference number: 1 (lower is better) Translates to: IFNVQQREMRVARCF*YQTEIEAVAALGLV Trigger: GACGAGCCCCAGGGCGGCCACCGCTTCTATTTCCGTCTGGTACCAGAAGCACCTAGCAACCCTCATTTCTCTCTGCTGGACATTGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR GCA 90 bp | TGTGTTATCTTCAATGTCCAGCAGAGAGAAATGAGGGTTGCTAGGTaGTTCTGGTACCAGACGGAAATAGAAGCGGTGGCCGCCCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: CVIFNVQQREMRVAR*FWYQTEIEAVAALG Trigger: CCCCAGGGCGGCCACCGCTTCTATTTCCGTCTGGTACCAGAAGCACCTAGCAACCCTCATTTCTCTCTGCTGGACATTGAAGATAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR TCA 90 bp | GTCGTTGTATTTGATCACATTGTCCCGCATGTCTTCATCCACGTCTaGGCTCAGATGGCTCTTGTGGTGCCGCCTGAGAGTGAGGATCAG | + |
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Preference number: 1 (lower is better) Translates to: VVVFDHIVPHVFIHV*AQMALVVPPESEDQ Trigger: CTGATCCTCACTCTCAGGCGGCACCACAAGAGCCATCTGAGCTCAGACGTGGATGAAGACATGCGGGACAATGTGATCAAATACAACGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR TCA 90 bp | TTGAACACCTACTCTGTGCCAGGCACCGCCCAACAACTTGACACATaGACCCTTTTGATCCTCTCAAATCTTCGAGGTAGGTGCTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: LNTYSVPGTAQQLDT*TLLILSNLRGRCCY Trigger: ATAACAGCACCTACCTCGAAGATTTGAGAGGATCAAAAGGGTTCATGTGTCAAGTTGTTGGGCGGTGCCTGGCACAGAGTAGGTGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR-3UTR GCA 90 bp | CCTGAACACCGAGAAGTCCGGCTCGGGGCTCGACGGCCCCCGAGGCAGCGAGTGCACGGTCCAGCCCCTTaGCAGTCACGATGGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: PEHREVRLGARRPPRQRVHGPAP*QSRWHQ Trigger: CTGGTGCCATCGTGACTGGCAAGGGGCTGGACCGTG...CACTCGCTGCCTCGGGGGCCGTCGAGCCCCGAGCCGGACTTCTCGGTGTTCAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCGCGTCCGCCAGCGCCACCTTGCGGCTGATGAAGTCCCTGAACACCGAGCCGTGCTGCTCAGGGTaGGTGGCCCGCTGTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: RSASASATLRLMKSLNTEPCCSG*VARCPQ Trigger: TTGTGGACAGCGGGCCACCCACCCTGAGCAGCACGG...CTCGGTGTTCAGGGACTTCATCAGCCGCAAGGTGGCGCTGGCGGACGCGGACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR CAA 90 bp | CCCGCTGTCCACAACGAGGATGGGCAGGAGGAACACGTCCTGCTCTaGCCGGTTGAAGCCCACGTGCTGCGTGTGCACCGCAGCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PAVHNEDGQEEHVLL*PVEAHVLRVHRSCV Trigger: AACACAGCTGCGGTGCACACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGACGTGTTCCTCCTGCCCATCCTCGTTGTGGACAGCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCGCGTCCGCCAGCGCCACCTTGCGGCTGATGAAGTCCCTGAACACCGAGCAAAGGCGGTGGTGTTaGAGGACTGGATGGTACCGG | + |
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Preference number: 2 (lower is better) Translates to: RSASASATLRLMKSLNTEQRRWC*RTGWYR Trigger: CCGGTACCATCCAGTCCTGCAACACCACCGCCTTTG...CTCGGTGTTCAGGGACTTCATCAGCCGCAAGGTGGCGCTGGCGGACGCGGACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTGAGCAAGTCACATCCACTTCTCTGGGGGAGCTTCCCCATCTGACACCTCAGAAAGCCTTGGGGTaGGCATGGCAGCAGCGCCCT | + |
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Preference number: 2 (lower is better) Translates to: VPEQVTSTSLGELPHLTPQKALG*AWQQRP Trigger: AGGGCGCTGCTGCCATGCCCACCCCAAGGCTTTCTG...AGGTGTCAGATGGGGAAGCTCCCCCAGAGAAGTGGATGTGACTTGCTCAGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCGCGTCCGCCAGCGCCACCTTGCGGCTGATGAAGTCCCTGAACACCGAGCAAGAACAACCAGGATaGGAACACAGACCAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: RSASASATLRLMKSLNTEQEQPG*EHRPRE Trigger: CTCTCTTGGTCTGTGTTCTCATCCTGGTTGTTCTTG...CTCGGTGTTCAGGGACTTCATCAGCCGCAAGGTGGCGCTGGCGGACGCGGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGAGAAATGACATGACGTGCCCAAGGCCAGACAGCCGGTCAGTGCCAGAGTCAGCACACAGTAGGTaGTTAGTAAATGACCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: AQRNDMTCPRPDSRSVPESAHSR*LVNDQP Trigger: GGGCTGGTCATTTACTAAGCACCTACTGTGTGCTGA...CTCTGGCACTGACCGGCTGTCTGGCCTTGGGCACGTCATGTCATTTCTCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR-3UTR GCA 90 bp | CCCACGTGCTGCGTGTGCACCGCAGCTGTGTTATCTTCAATGTCCAGCAGAGAGAGCACAGTAATGTTGTaGCAGCCAGCGGTTTCACGG | + |
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Preference number: 2 (lower is better) Translates to: PTCCVCTAAVLSSMSSRESTVML*QPAVSR Trigger: CCGTGAAACCGCTGGCTGGCACAACATTACTGTGCT...CTCTCTGCTGGACATTGAAGATAACACAGCTGCGGTGCACACGCAGCACGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CCA 90 bp | CGGTGGTGTTGCAGGACTGGATGGTACCGGAGCTGTCACAGCCGCAGATGCGGAGTTGCTAGGTGCTTCTaGTACCAGACGGAAATAGAA | + |
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Preference number: 2 (lower is better) Translates to: RWCCRTGWYRSCHSRRCGVARCF*YQTEIE Trigger: TTCTATTTCCGTCTGGTACCAGAAGCACCTAGCAAC...TCCGCATCTGCGGCTGTGACAGCTCCGGTACCATCCAGTCCTGCAACACCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CCA 90 bp | CACGTGCTGCGTGTGCACCGCAGCTGTGTTATCTTCAATGTCCAGCAGAGAGAAATGGTTTGGATGAGCTaGCCTGGCTTGGCGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: HVLRVHRSCVIFNVQQREMVWMS*PGLASS Trigger: TGAAGACGCCAAGCCAGGCCAGCTCATCCAAACCAT...TTCTCTCTGCTGGACATTGAAGATAACACAGCTGCGGTGCACACGCAGCACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTCAATGTCCAGCAGAGAGAAATGAGGGTTGCTAGGTGCTTCTGGTACCAGCCTTGCCAGTCACGATaGCACCAGTGTCCGCATCGA | + |
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Preference number: 2 (lower is better) Translates to: IFNVQQREMRVARCFWYQPCQSR*HQCPHR Trigger: TCGATGCGGACACTGGTGCCATCGTGACTGGCAAGG...CTGGTACCAGAAGCACCTAGCAACCCTCATTTCTCTCTGCTGGACATTGAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGAACACCGAGAAGTCCGGCTCGGGGCTCGACGGCCCCCGAGGCAGCGAGTGGCGAGCTCCGGGGGATaGTCGTTCACGTCCAGGATT | + |
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Preference number: 3 (lower is better) Translates to: PEHREVRLGARRPPRQRVASSGG*SFTSRI Trigger: AATCCTGGACGTGAACGACAATCCCCCGGAGCTCGC...CACTCGCTGCCTCGGGGGCCGTCGAGCCCCGAGCCGGACTTCTCGGTGTTCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGAACACCGAGAAGTCCGGCTCGGGGCTCGACGGCCCCCGAGGCAGCGAGTGATGAGCTGGCCTGGCTaGGCGTCTTCACACACAGCT | + |
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Preference number: 3 (lower is better) Translates to: PEHREVRLGARRPPRQRVMSWPG*ASSHTA Trigger: AGCTGTGTGTGAAGACGCCAAGCCAGGCCAGCTCAT...CACTCGCTGCCTCGGGGGCCGTCGAGCCCCGAGCCGGACTTCTCGGTGTTCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CAA 90 bp | GTGAGGGTGCCCGTGCTGCTCAGGGTGGGTGGCCCGCTGTCCACAACGAGGATGTCCTGCTCTTGCCGGTaGAAGCCCACGTGCTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: VRVPVLLRVGGPLSTTRMSCSCR*KPTCCV Trigger: CACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGA...CATCCTCGTTGTGGACAGCGGGCCACCCACCCTGAGCAGCACGGGCACCCTCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCTCGACGGCCCCCGAGGCAGCGAGTGGCGCTCAGAAGAGGAAGCAGCCTGCACAAAGGCGGTGGTGTaGCAGGACTGGATGGTACCG | + |
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Preference number: 3 (lower is better) Translates to: GLDGPRGSEWRSEEEAACTKAVV*QDWMVP Trigger: CGGTACCATCCAGTCCTGCAACACCACCGCCTTTGT...GCAGGCTGCTTCCTCTTCTGAGCGCCACTCGCTGCCTCGGGGGCCGTCGAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCCCAAGGCCAGACAGCCGGTCAGTGCCAGAGGCTCCACCACTTGCTGCCTGTGCTTTCCCCTCCCATaGTCCTTTCCCAGAGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: VPKARQPVSARGSTTCCLCFPLP*SFPRAG Trigger: CCCGGCTCTGGGAAAGGACAATGGGAGGGGAAAGCA...CAGGCAGCAAGTGGTGGAGCCTCTGGCACTGACCGGCTGTCTGGCCTTGGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR CCA 72 bp | CCCATTGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTaGTCCTGTCCAACCCCAGATCCGCACAGGCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: PIVLSQSRVPLP*SCPTPDPHRPG Trigger: ACCTGGCCTGTGCGGATCTGGGGTTGGACAGGACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR GCA 72 bp | CTGTCCACAACGAGGATGGGCAGGAGGAACACGTCCTaGTCTTGCCGGTTGAAGCCCACGTGCTGCGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: LSTTRMGRRNTS*SCRLKPTCCVC Trigger: GCACACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGACGTGTTCCTCCTGCCCATCCTCGTTGTGGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR CCA 72 bp | GAGGCAGCCATGACAAAGGCGGTGGTGTTGCAGGACTaGATGGTACCGGAGCTGTCACAGCCGCAGATGCGG | + |
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Preference number: 3 (lower is better) Translates to: EAAMTKAVVLQD*MVPELSQPQMR Trigger: CCGCATCTGCGGCTGTGACAGCTCCGGTACCATCCAGTCCTGCAACACCACCGCCTTTGTCATGGCTGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR GCA 72 bp | TGTTGTGCCAGCCAGCGGTTTCACGGTCCAGCCCCTTaGCAGTCACGATGGCACCAGTGTCCGCATCGATGT | + |
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Preference number: 3 (lower is better) Translates to: CCASQRFHGPAP*QSRWHQCPHRC Trigger: ACATCGATGCGGACACTGGTGCCATCGTGACTGGCAAGGGGCTGGACCGTGAAACCGCTGGCTGGCACAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR-3UTR CAA 90 bp | CCCACGTGCTGCGTGTGCACCGCAGCTGTGTTATCTTCAATGTCCAGCAGAGAGTCACGGTCCAGCCCCTaGCCAGTCACGATGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: PTCCVCTAAVLSSMSSRESRSSP*PVTMAP Trigger: TGGTGCCATCGTGACTGGCAAGGGGCTGGACCGTGA...CTCTCTGCTGGACATTGAAGATAACACAGCTGCGGTGCACACGCAGCACGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR GCA 72 bp | AGACAGCCGGTCAGTGCCAGAGGCTCCACCACTTGCTaGCTGGGTGTCCCTGAGCAAGTCACATCCACTTCT | + |
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Preference number: 3 (lower is better) Translates to: RQPVSARGSTTC*LGVPEQVTSTS Trigger: AGAAGTGGATGTGACTTGCTCAGGGACACCCAGGCAGCAAGTGGTGGAGCCTCTGGCACTGACCGGCTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR CCA 72 bp | CCCTGGGGCTCGTCTCTGTCCACCACACTGATGGTTTaGATGAGCTGGCCTGGCTTGGCGTCTTCACACACA | + |
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Preference number: 3 (lower is better) Translates to: PWGSSLSTTLMV*MSWPGLASSHT Trigger: TGTGTGTGAAGACGCCAAGCCAGGCCAGCTCATCCAAACCATCAGTGTGGTGGACAGAGACGAGCCCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR CCA 72 bp | CAGCGGTTTCACGGTCCAGCCCCTTGCCAGTCACGATaGCACCAGTGTCCGCATCGATGTCAAAGATCTGCT | + |
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Preference number: 3 (lower is better) Translates to: QRFHGPAPCQSR*HQCPHRCQRSA Trigger: AGCAGATCTTTGACATCGATGCGGACACTGGTGCCATCGTGACTGGCAAGGGGCTGGACCGTGAAACCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR CCA 72 bp | TCTTTAATTGGATGCCAGAAAGCCTTGGGGTGGGCATaGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATT | + |
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Preference number: 3 (lower is better) Translates to: SLIGCQKALGWA*QQRPPLLSPPI Trigger: AATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCAAGGCTTTCTGGCATCCAATTAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR CCA 72 bp | CCTTCATCTTTAATTGGATGCCAGAAAGCCTTGGGGTaGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCT | + |
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Preference number: 3 (lower is better) Translates to: PSSLIGCQKALG*AWQQRPPLLSP Trigger: AGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCAAGGCTTTCTGGCATCCAATTAAAGATGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR CCA 72 bp | GTCCAGCAGAGAGAAATGAGGGTTGCTAGGTGCTTCTaGTACCAGACGGAAATAGAAGCGGTGGCCGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VQQREMRVARCF*YQTEIEAVAAL Trigger: CAGGGCGGCCACCGCTTCTATTTCCGTCTGGTACCAGAAGCACCTAGCAACCCTCATTTCTCTCTGCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR CCA 72 bp | TTGTCCCGCATGTCTTCATCCACGTCTGAGCTCAGATaGCTCTTGTGGTGCCGCCTGAGAGTGAGGATCAGC | + |
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Preference number: 3 (lower is better) Translates to: LSRMSSSTSELR*LLWCRLRVRIS Trigger: GCTGATCCTCACTCTCAGGCGGCACCACAAGAGCCATCTGAGCTCAGACGTGGATGAAGACATGCGGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR TCA 72 bp | TTTGATCACATTGTCCCGCATGTCTTCATCCACGTCTaGGCTCAGATGGCTCTTGTGGTGCCGCCTGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: FDHIVPHVFIHV*AQMALVVPPES Trigger: ACTCTCAGGCGGCACCACAAGAGCCATCTGAGCTCAGACGTGGATGAAGACATGCGGGACAATGTGATCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR TCA 72 bp | TACTCTGTGCCAGGCACCGCCCAACAACTTGACACATaGACCCTTTTGATCCTCTCAAATCTTCGAGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: YSVPGTAQQLDT*TLLILSNLRGR Trigger: CCTACCTCGAAGATTTGAGAGGATCAAAAGGGTTCATGTGTCAAGTTGTTGGGCGGTGCCTGGCACAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR TCA 72 bp | GAACACCTACTCTGTGCCAGGCACCGCCCAACAACTTaGCACATGAACCCTTTTGATCCTCTCAAATCTTCG | + |
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Preference number: 3 (lower is better) Translates to: EHLLCARHRPTT*HMNPFDPLKSS Trigger: CGAAGATTTGAGAGGATCAAAAGGGTTCATGTGTCAAGTTGTTGGGCGGTGCCTGGCACAGAGTAGGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR TCA 72 bp | GCAGCTGTGTTATCTTCAATGTCCAGCAGAGAGAAATaGGGGTTGCTAGGTGCTTCTGGTACCAGACGGAAA | + |
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Preference number: 3 (lower is better) Translates to: AAVLSSMSSREK*GLLGASGTRRK Trigger: TTTCCGTCTGGTACCAGAAGCACCTAGCAACCCTCATTTCTCTCTGCTGGACATTGAAGATAACACAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR TCA 90 bp | GCCCGTGCTGCTCAGGGTGGGTGGCCCGCTGTCCACAACGAGGATGGGCAGGAGGACTGTAGTGGAACCTaGGAGGCCACCCAGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: ARAAQGGWPAVHNEDGQEDCSGT*EATQLA Trigger: GGCCAGCTGGGTGGCCTCTCAGGTTCCACTACAGTC...CTCCTGCCCATCCTCGTTGTGGACAGCGGGCCACCCACCCTGAGCAGCACGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR CCA 90 bp | CCTGAACACCGAGAAGTCCGGCTCGGGGCTCGACGGCCCCCGAGGCAGCGAGTGGGTCCAGGCGCTCCGTaGCATGGATGTCACCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PEHREVRLGARRPPRQRVGPGAP*HGCHLS Trigger: TGACAGGTGACATCCATGCCACGGAGCGCCTGGACC...CACTCGCTGCCTCGGGGGCCGTCGAGCCCCGAGCCGGACTTCTCGGTGTTCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR CCA 90 bp | GGGCTCGACGGCCCCCGAGGCAGCGAGTGGCGCTCAGAAGAGGAAGCAGCCTGCGGGTCCACTGTGAAGTaGTGCTCGCCGTCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: GLDGPRGSEWRSEEEAACGSTVK*CSPSST Trigger: TGTGCTGGACGGCGAGCACCACTTCACAGTGGACCC...GCAGGCTGCTTCCTCTTCTGAGCGCCACTCGCTGCCTCGGGGGCCGTCGAGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR CCA 90 bp | GTGCCCAAGGCCAGACAGCCGGTCAGTGCCAGAGGCTCCACCACTTGCTGCCTGAAGCGGTGGCCGCCCTaGGGCTCGTCTCTGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: VPKARQPVSARGSTTCCLKRWPP*GSSLST Trigger: GGTGGACAGAGACGAGCCCCAGGGCGGCCACCGCTT...CAGGCAGCAAGTGGTGGAGCCTCTGGCACTGACCGGCTGTCTGGCCTTGGGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | TCAGTGCCAGAGGCTCCACCACTTGCTGCCTGGGTGTCCCTGAGCAAGTCACATCGCTGTGCAGCGAGCTaGGCGAGGCGGCCGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SVPEAPPLAAWVSLSKSHRCAAS*ARRPAS Trigger: GCTCGCCGGCCGCCTCGCTCAGCTCGCTGCACAGCG...ATGTGACTTGCTCAGGGACACCCAGGCAGCAAGTGGTGGAGCCTCTGGCACTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | GGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCCCTCCCGTCGGGCTGCGCTGGCCACCCAGCTGGCCTaGCATGTCTGTGGCTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: GTCRGAGTLQIPSRRAALATQLA*HVCGLN Trigger: ATTCAAGCCACAGACATGGCAGGCCAGCTGGGTGGC...CAGCGCAGCCCGACGGGAGGGGATCTGCAGGGTCCCTGCTCCGCGACACGTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | AAGATACACCCCTGGGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCCCTCCCACCAGGGAGCCCACCTaGGCGTCCTCCTGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KIHPWERVAEQGPCRSPPTREPT*ASSCTS Trigger: GGAGGTGCAGGAGGACGCGCAGGTGGGCTCCCTGGT...GGGAGGGGATCTGCAGGGTCCCTGCTCCGCGACACGTTCCCAGGGGTGTATCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | CCCATTGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTGGTCCTGTCCAACCCCACCGGTCGAGCCGCTGTaGAGCGAGCTGAGCGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PIVLSQSRVPLPWSCPTPPVEPL*SELSEA Trigger: CGCCTCGCTCAGCTCGCTGCACAGCGGCTCGACCGG...TGGGGTTGGACAGGACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAATGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | GCCCGTGCTGCTCAGGGTGGGTGGCCCGCTGTCCACAACGAGGATGGGCAGGAGCCACAGCCGTACCGATaGGGGCTGACTCCTGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: ARAAQGGWPAVHNEDGQEPQPYR*GLTPVC Trigger: GCATACAGGAGTCAGCCCCCATCGGTACGGCTGTGG...CTCCTGCCCATCCTCGTTGTGGACAGCGGGCCACCCACCCTGAGCAGCACGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR TCA 90 bp | TGCCAGAAAGCCTTGGGGTGGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTGGACGTGCCTGTAGGTaGCAGCTCGGCCACACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQKALGWAWQQRPPLLSPGRACR*QLGHTA Trigger: GGCAGTGTGGCCGAGCTGTCACCTACAGGCACGTCC...AGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCAAGGCTTTCTGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | GCCTTGGGGTGGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATTGTCGACTGTAGTGGAACCTaGGAGGCCACCCAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALGWAWQQRPPLLSPPIVDCSGT*EATQLA Trigger: GGCCAGCTGGGTGGCCTCTCAGGTTCCACTACAGTC...GACAATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCAAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | GCCTTGGGGTGGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATTGTCCCTGCTCTTGCCGGTTaGAGCCCACGTGCTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALGWAWQQRPPLLSPPIVPALAG*SPRAAC Trigger: ACACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGG...GACAATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCAAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | GCCCGTGCTGCTCAGGGTGGGTGGCCCGCTGTCCACAACGAGGATGGGCAGGAGGCCACCCAGCTGGCCTaGCATGTCTGTGGCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ARAAQGGWPAVHNEDGQEATQLA*HVCGLN Trigger: ATTCAAGCCACAGACATGGCAGGCCAGCTGGGTGGC...CTCCTGCCCATCCTCGTTGTGGACAGCGGGCCACCCACCCTGAGCAGCACGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR CCA 90 bp | CCTGAACACCGAGAAGTCCGGCTCGGGGCTCGACGGCCCCCGAGGCAGCGAGTGTCCAGCACCACTGTGTaGACCTGCTGCGACTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PEHREVRLGARRPPRQRVSSTTV*TCCDSK Trigger: CTTTGAGTCGCAGCAGGTCCACACAGTGGTGCTGGA...CACTCGCTGCCTCGGGGGCCGTCGAGCCCCGAGCCGGACTTCTCGGTGTTCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR CAA 72 bp | GGAGGCACCGATAGGTCCGCGTCCGCCAGCGCCACCTaGCGGCTGATGAAGTCCCTGAACACCGAGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGTDRSASASAT*RLMKSLNTEKS Trigger: GGACTTCTCGGTGTTCAGGGACTTCATCAGCCGCAAGGTGGCGCTGGCGGACGCGGACCTATCGGTGCCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | GGGTTCCCCTACCGTGGTCCTGTCCAACCCCAGATCCGCACAGGCCAGGTTCCCTTGAAGCCCACGTGCTaGGTGTGCACCGCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFPYRGPVQPQIRTGQVPLKPTC*VCTAAV Trigger: CACAGCTGCGGTGCACACGCAGCACGTGGGCTTCAA...GGGAACCTGGCCTGTGCGGATCTGGGGTTGGACAGGACCACGGTAGGGGAACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR CAA 72 bp | CATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATaGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HGSSALLCFPLP*SFPRAGFPYRG Trigger: ACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | GCCTTGGGGTGGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATTGTCCGTACCGATGGGGGCTaGCTCCTGTATGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALGWAWQQRPPLLSPPIVRTDGG*LLYAEL Trigger: CAGTTCAGCATACAGGAGTCAGCCCCCATCGGTACG...GACAATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCAAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | TGCCAGAAAGCCTTGGGGTGGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTACAGCTCGGCCACACTaGCAATGTAGGGGCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CQKALGWAWQQRPPLLSPTARPH*QCRGRG Trigger: TCCACGGCCCCTACATTGGCAGTGTGGCCGAGCTGT...AGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCAAGGCTTTCTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | CTACCGTGGTCCTGTCCAACCCCAGATCCGCACAGGCCAGGTTCCCCTCCTTTTACCTGCGCGTCCTCCTaGACCTCCAGTAGGCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPWSCPTPDPHRPGSPPFTCASS*TSSRPE Trigger: CTCCGGCCTACTGGAGGTGCAGGAGGACGCGCAGGT...AAAAGGAGGGGAACCTGGCCTGTGCGGATCTGGGGTTGGACAGGACCACGGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | GTTGCAGGACTGGATGGTACCGGAGCTGTCACAGCCGCAGATGCGGATGGTGAGACCTGCGCGTCCTCCTaGACCTCCAGTAGGCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAGLDGTGAVTAADADGETCASS*TSSRPE Trigger: CTCCGGCCTACTGGAGGTGCAGGAGGACGCGCAGGT...CTCACCATCCGCATCTGCGGCTGTGACAGCTCCGGTACCATCCAGTCCTGCAAC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | GGGTTCCCCTACCGTGGTCCTGTCCAACCCCAGATCCGCACAGGCCAGGTTCCCCCCACGTGCTGCGTGTaGACCGCAGCTGTGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: GFPYRGPVQPQIRTGQVPPTCCV*TAAVLS Trigger: AGATAACACAGCTGCGGTGCACACGCAGCACGTGGG...GGGAACCTGGCCTGTGCGGATCTGGGGTTGGACAGGACCACGGTAGGGGAACCC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | GCCGCCCTGGGGCTCGTCTCTGTCCACCACACTGATGGTTTGGATGAGCTGGCCCGTCAATCAGGAAGATaGTCCCTGCACCCTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AALGLVSVHHTDGLDELARQSGR*SLHPRP Trigger: CGGGCGAGGGTGCAGGGACCATCTTCCTGATTGACG...GGCCAGCTCATCCAAACCATCAGTGTGGTGGACAGAGACGAGCCCCAGGGCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR CCA 90 bp | TCCCATTGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTGGTCCTGTCCAACCCCGAGAGGCCACCCAGCTaGCCTGCCATGTCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHCPFPEPGSPTVVLSNPERPPS*PAMSVA Trigger: AGCCACAGACATGGCAGGCCAGCTGGGTGGCCTCTC...GGGGTTGGACAGGACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAATGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | CGGTGGTGTTGCAGGACTGGATGGTACCGGAGCTGTCACAGCCGCAGATGCGGAGAGAGGCCACCCAGCTaGCCTGCCATGTCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RWCCRTGWYRSCHSRRCGERPPS*PAMSVA Trigger: AGCCACAGACATGGCAGGCCAGCTGGGTGGCCTCTC...TCCGCATCTGCGGCTGTGACAGCTCCGGTACCATCCAGTCCTGCAACACCACCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR CCA 90 bp | CGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCGCCCCGTGCTGCTCAGGGTaGGTGGCCCGCTGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RTGQVPLLFPDIGHHCRAPCCSG*VARCPQ Trigger: TTGTGGACAGCGGGCCACCCACCCTGAGCAGCACGG...GGCGCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | GCCGCCCTGGGGCTCGTCTCTGTCCACCACACTGATGGTTTGGATGAGCTGGCCCCGAGATGGTGTACTTaGTGGTCCCGTCCCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AALGLVSVHHTDGLDELAPRWCT*WSRPLR Trigger: ACGAAGGGGACGGGACCATCAAGTACACCATCTCGG...GGCCAGCTCATCCAAACCATCAGTGTGGTGGACAGAGACGAGCCCCAGGGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR TCA 90 bp | TGGGGTGGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATTGTCCTTTTCTTGGGGTCCACTGTaGAGTGGTGCTCGCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGGHGSSALLCFPLPLSFSWGPL*SGARRP Trigger: TGGACGGCGAGCACCACTTCACAGTGGACCCCAAGA...AAAGGACAATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | CGGTGGTGTTGCAGGACTGGATGGTACCGGAGCTGTCACAGCCGCAGATGCGGATCTTGGGGTCCACTGTaGAGTGGTGCTCGCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RWCCRTGWYRSCHSRRCGSWGPL*SGARRP Trigger: TGGACGGCGAGCACCACTTCACAGTGGACCCCAAGA...TCCGCATCTGCGGCTGTGACAGCTCCGGTACCATCCAGTCCTGCAACACCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | TCCCCTCCCATTGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTGGTCCTGTCCACAGGAAGATGGTCCCTaGACCCTCGCCCGAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPPIVLSQSRVPLPWSCPQEDGP*TLARDG Trigger: ACCATCTCGGGCGAGGGTGCAGGGACCATCTTCCTG...TGGACAGGACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAATGGGAGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | AACACGTCCTGCTCTTGCCGGTTGAAGCCCACGTGCTGCGTGTGCACCGCAGCTACGCGTCTCCTCCGCTaGCGCTCTCTTCTCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTSCSCRLKPTCCVCTAATRLLR*RSLLSG Trigger: ACCTGAGAGAAGAGAGCGGCAGCGGAGGAGACGCGT...AGCTGCGGTGCACACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGACGTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | CTACCGTGGTCCTGTCCAACCCCAGATCCGCACAGGCCAGGTTCCCCTCCTTTTCCTGGTCTCGGAATGTaGCTAGGTCGGCGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPWSCPTPDPHRPGSPPFPGLGM*LGRRSG Trigger: CCCGCTTCGCCGACCTAGGCACATTCCGAGACCAGG...AAAAGGAGGGGAACCTGGCCTGTGCGGATCTGGGGTTGGACAGGACCACGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | TCCTGCTCTTGCCGGTTGAAGCCCACGTGCTGCGTGTGCACCGCAGCTGTGTTAGGCCACGCGCACGATTaGCTGGTCTCGGAATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSCRLKPTCCVCTAAVLGHAHD*LVSECA Trigger: GGCACATTCCGAGACCAGGCAATCGTGCGCGTGGCC...TAACACAGCTGCGGTGCACACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | CGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCGCCAGAAAGGCGAAGTCCTaGTCCGAGCCGGTCGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTGQVPLLFPDIGHHCRARKAKS*SEPVEP Trigger: CGGCTCGACCGGCTCGGAGCAGGACTTCGCCTTTCT...GGCGCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | TTCCGCAAGATACACCCCTGGGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCCGTCAATCAGGAAGATaGTCCCTGCACCCTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FRKIHPWERVAEQGPCRSRQSGR*SLHPRP Trigger: CGGGCGAGGGTGCAGGGACCATCTTCCTGATTGACG...GGATCTGCAGGGTCCCTGCTCCGCGACACGTTCCCAGGGGTGTATCTTGCGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | AGGTCCGCGTCCGCCAGCGCCACCTTGCGGCTGATGAAGTCCCTGAACACCGAGTTGTGGGAAGCGGGGTaGGTTGTCGTTGACGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSASASATLRLMKSLNTELWEAG*VVVDVS Trigger: ACTGACGTCAACGACAACCCACCCCGCTTCCCACAA...CTCGGTGTTCAGGGACTTCATCAGCCGCAAGGTGGCGCTGGCGGACGCGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR CCA 90 bp | TCCCATTGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTGGTCCTGTCCAACCCCCCACAGCCGTACCGATaGGGGCTGACTCCTGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: SHCPFPEPGSPTVVLSNPPQPYR*GLTPVC Trigger: GCATACAGGAGTCAGCCCCCATCGGTACGGCTGTGG...GGGGTTGGACAGGACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAATGGGA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | GCCGCCCTGGGGCTCGTCTCTGTCCACCACACTGATGGTTTGGATGAGCTGGCCGCTTCTGCACCACTATaGTGGCTTCCTGAGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: AALGLVSVHHTDGLDELAASAPL*WLPECR Trigger: GCGACACTCAGGAAGCCATCATAGTGGTGCAGAAGC...GGCCAGCTCATCCAAACCATCAGTGTGGTGGACAGAGACGAGCCCCAGGGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | GAGGCAGCCATGACAAAGGCGGTGGTGTTGCAGGACTGGATGGTACCGGAGCTGACAGCTCGGCCACACTaGCAATGTAGGGGCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EAAMTKAVVLQDWMVPELTARPH*QCRGRG Trigger: TCCACGGCCCCTACATTGGCAGTGTGGCCGAGCTGT...CAGCTCCGGTACCATCCAGTCCTGCAACACCACCGCCTTTGTCATGGCTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | TCAGTGCCAGAGGCTCCACCACTTGCTGCCTGGGTGTCCCTGAGCAAGTCACATCGGTTGAAGCCCACGTaGTGCGTGTGCACCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVPEAPPLAAWVSLSKSHRLKPT*CVCTAA Trigger: AGCTGCGGTGCACACGCAGCACGTGGGCTTCAACCG...ATGTGACTTGCTCAGGGACACCCAGGCAGCAAGTGGTGGAGCCTCTGGCACTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | CTACCGTGGTCCTGTCCAACCCCAGATCCGCACAGGCCAGGTTCCCCTCCTTTTGGGTCCACTGTGAAGTaGTGCTCGCCGTCCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPWSCPTPDPHRPGSPPFGSTVK*CSPSST Trigger: TGTGCTGGACGGCGAGCACCACTTCACAGTGGACCC...AAAAGGAGGGGAACCTGGCCTGTGCGGATCTGGGGTTGGACAGGACCACGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| 3UTR CAA 72 bp | GCCCTGGGGCTCGTCTCTGTCCACCACACTGATGGTTaGGATGAGCTGGCCTGGCTTGGCGTCTTCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: ALGLVSVHHTDG*DELAWLGVFTH Trigger: GTGTGTGAAGACGCCAAGCCAGGCCAGCTCATCCAAACCATCAGTGTGGTGGACAGAGACGAGCCCCAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR TCA 90 bp | GGCAGCCATGACAAAGGCGGTGGTGTTGCAGGACTGGATGGTACCGGAGCTGTCCGTACCGATGGGGGCTaGCTCCTGTATGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GSHDKGGGVAGLDGTGAVRTDGG*LLYAEL Trigger: CAGTTCAGCATACAGGAGTCAGCCCCCATCGGTACG...GACAGCTCCGGTACCATCCAGTCCTGCAACACCACCGCCTTTGTCATGGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR TCA 90 bp | CGGTGGTGTTGCAGGACTGGATGGTACCGGAGCTGTCACAGCCGCAGATGCGGAACTATGATGGCTTCCTaGGTGTCGCTGTCCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RWCCRTGWYRSCHSRRCGTMMAS*VSLSVV Trigger: CACCACGGACAGCGACACTCAGGAAGCCATCATAGT...TCCGCATCTGCGGCTGTGACAGCTCCGGTACCATCCAGTCCTGCAACACCACCG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR TCA 90 bp | ATCACTGCCGCGCCCCTGAGTCTTCCGCAAGATACACCCCTGGGAACGTGTCGCGCTTCTGCACCACTATaGTGGCTTCCTGAGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ITAAPLSLPQDTPLGTCRASAPL*WLPECR Trigger: GCGACACTCAGGAAGCCATCATAGTGGTGCAGAAGC...GCGACACGTTCCCAGGGGTGTATCTTGCGGAAGACTCAGGGGCGCGGCAGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | CGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCGCCTCCACTGTGAAGTGGTaGTCGCCGTCCAGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RTGQVPLLFPDIGHHCRASTVKW*SPSSTL Trigger: CAGTGTGCTGGACGGCGAGCACCACTTCACAGTGGA...GGCGCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCTTGCCAGTCACGATGGCACCAGTGTCCGCATCGATGTCAAAGATCTCCTGGTCTCGGAATGTaGCTAGGTCGGCGAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PAPCQSRWHQCPHRCQRSPGLGM*LGRRSG Trigger: CCCGCTTCGCCGACCTAGGCACATTCCGAGACCAGG...AGATCTTTGACATCGATGCGGACACTGGTGCCATCGTGACTGGCAAGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | GTCCCTGAGCAAGTCACATCCACTTCTCTGGGGGAGCTTCCCCATCTGACACCTGGCCACGCGCACGATTaGCTGGTCTCGGAATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPEQVTSTSLGELPHLTPGHAHD*LVSECA Trigger: GGCACATTCCGAGACCAGGCAATCGTGCGCGTGGCC...AGGTGTCAGATGGGGAAGCTCCCCCAGAGAAGTGGATGTGACTTGCTCAGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGAGCAAGTCACATCCACTTCTCTGGGGGAGCTTCCCCATCTGACACCTCACGGTCCAGCCCCTTaGCAGTCACGATGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPEQVTSTSLGELPHLTPHGPAP*QSRWHQ Trigger: CTGGTGCCATCGTGACTGGCAAGGGGCTGGACCGTG...AGGTGTCAGATGGGGAAGCTCCCCCAGAGAAGTGGATGTGACTTGCTCAGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS-3UTR GCA 90 bp | CTACCGTGGTCCTGTCCAACCCCAGATCCGCACAGGCCAGGTTCCCCTCCTTTTCAAAGGCGGTGGTGTTaGAGGACTGGATGGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LPWSCPTPDPHRPGSPPFQRRWC*RTGWYR Trigger: CCGGTACCATCCAGTCCTGCAACACCACCGCCTTTG...AAAAGGAGGGGAACCTGGCCTGTGCGGATCTGGGGTTGGACAGGACCACGGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS-3UTR GCA 90 bp | TTCCGCAAGATACACCCCTGGGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCAGATGGCTCTTGTGGTaGCGCCTGAGAGTGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FRKIHPWERVAEQGPCRSRWLLW*RLRVRI Trigger: GATCCTCACTCTCAGGCGGCACCACAAGAGCCATCT...GGATCTGCAGGGTCCCTGCTCCGCGACACGTTCCCAGGGGTGTATCTTGCGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | TTCCGCAAGATACACCCCTGGGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCTCCAGCACCACTGTGTaGACCTGCTGCGACTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRKIHPWERVAEQGPCRSSSTTV*TCCDSK Trigger: CTTTGAGTCGCAGCAGGTCCACACAGTGGTGCTGGA...GGATCTGCAGGGTCCCTGCTCCGCGACACGTTCCCAGGGGTGTATCTTGCGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | CGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCGCCACGCGCACGATTGCCTaGTCTCGGAATGTGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTGQVPLLFPDIGHHCRATRTIA*SRNVPR Trigger: CCTAGGCACATTCCGAGACCAGGCAATCGTGCGCGT...GGCGCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | TTGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTGGTCCTGTCCAACCCCAGATCCTCAGATGGCTCTTGTaGTGCCGCCTGAGAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFPRAGFPYRGPVQPQILRWLL*CRLRVR Trigger: CCTCACTCTCAGGCGGCACCACAAGAGCCATCTGAG...GATCTGGGGTTGGACAGGACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | TCAGTGCCAGAGGCTCCACCACTTGCTGCCTGGGTGTCCCTGAGCAAGTCACATAGCTGGTTGTCCTCCTaGGCCCCAGGTGACAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVPEAPPLAAWVSLSKSHSWLSS*APGDKE Trigger: CTCTTTGTCACCTGGGGCTCAGGAGGACAACCAGCT...ATGTGACTTGCTCAGGGACACCCAGGCAGCAAGTGGTGGAGCCTCTGGCACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | TGGGGTGGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATTGTCCTTTAGCACAGTAATGTTGTaGCAGCCAGCGGTTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: WGGHGSSALLCFPLPLSFSTVML*QPAVSR Trigger: CCGTGAAACCGCTGGCTGGCACAACATTACTGTGCT...AAAGGACAATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | ATCCGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCGGTCCAGGCGCTCCGTaGCATGGATGTCACCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IRTGQVPLLFPDIGHHCRGPGAP*HGCHLS Trigger: TGACAGGTGACATCCATGCCACGGAGCGCCTGGACC...GCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | TTGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTGGTCCTGTCCAACCCCAGATCTTGTGGGAAGCGGGGTaGGTTGTCGTTGACGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSFPRAGFPYRGPVQPQILWEAG*VVVDVS Trigger: ACTGACGTCAACGACAACCCACCCCGCTTCCCACAA...GATCTGGGGTTGGACAGGACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | GCCCAGAGAAATGACATGACGTGCCCAAGGCCAGACAGCCGGTCAGTGCCAGAGTGTCCACAACGAGGATaGGCAGGAGGAACACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQRNDMTCPRPDSRSVPECPQRG*AGGTRP Trigger: AGGACGTGTTCCTCCTGCCCATCCTCGTTGTGGACA...CTCTGGCACTGACCGGCTGTCTGGCCTTGGGCACGTCATGTCATTTCTCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | CCCACGTGCTGCGTGTGCACCGCAGCTGTGTTATCTTCAATGTCCAGCAGAGAGAGCTGGTTGTCCTCCTaGGCCCCAGGTGACAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTCCVCTAAVLSSMSSRESWLSS*APGDKE Trigger: CTCTTTGTCACCTGGGGCTCAGGAGGACAACCAGCT...CTCTCTGCTGGACATTGAAGATAACACAGCTGCGGTGCACACGCAGCACGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR TCA 90 bp | ATCCGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCCCGAGATGGTGTACTTaGTGGTCCCGTCCCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: IRTGQVPLLFPDIGHHCRPRWCT*WSRPLR Trigger: ACGAAGGGGACGGGACCATCAAGTACACCATCTCGG...GCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | TCAGTGCCAGAGGCTCCACCACTTGCTGCCTGGGTGTCCCTGAGCAAGTCACATACTATGATGGCTTCCTaGGTGTCGCTGTCCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVPEAPPLAAWVSLSKSHTMMAS*VSLSVV Trigger: CACCACGGACAGCGACACTCAGGAAGCCATCATAGT...ATGTGACTTGCTCAGGGACACCCAGGCAGCAAGTGGTGGAGCCTCTGGCACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | CCCATTGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTGGTCCTGTCCAACCCCATCCAGCAGAGAGAAATaGGGGTTGCTAGGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PIVLSQSRVPLPWSCPTPSSREK*GLLGAS Trigger: AGAAGCACCTAGCAACCCTCATTTCTCTCTGCTGGA...TGGGGTTGGACAGGACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | ATCCGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCACGTCTGAGCTCAGATaGCTCTTGTGGTGCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRTGQVPLLFPDIGHHCRTSELR*LLWCRL Trigger: CAGGCGGCACCACAAGAGCCATCTGAGCTCAGACGT...GCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | TTCCGCAAGATACACCCCTGGGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCCAAGAACAACCAGGATaGGAACACAGACCAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRKIHPWERVAEQGPCRSQEQPG*EHRPRE Trigger: CTCTCTTGGTCTGTGTTCTCATCCTGGTTGTTCTTG...GGATCTGCAGGGTCCCTGCTCCGCGACACGTTCCCAGGGGTGTATCTTGCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | ACATTGGTCATCACTGCCGCGCCCCTGAGTCTTCCGCAAGATACACCCCTGGGAGTCTTCATCCACGTCTaGGCTCAGATGGCTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLVITAAPLSLPQDTPLGVFIHV*AQMALV Trigger: CACAAGAGCCATCTGAGCTCAGACGTGGATGAAGAC...TCCCAGGGGTGTATCTTGCGGAAGACTCAGGGGCGCGGCAGTGATGACCAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | CCCATTGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTGGTCCTGTCCAACCCCACCTCGTCGTTGTATTTaGTCACATTGTCCCGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PIVLSQSRVPLPWSCPTPPRRCI*SHCPAC Trigger: ACATGCGGGACAATGTGATCAAATACAACGACGAGG...TGGGGTTGGACAGGACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | CTTGCCAGTCACGATGGCACCAGTGTCCGCATCGATGTCAAAGATCTGCTCCAACAGGAAGATGGTCCCTaGACCCTCGCCCGAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LASHDGTSVRIDVKDLLQQEDGP*TLARDG Trigger: ACCATCTCGGGCGAGGGTGCAGGGACCATCTTCCTG...TTGGAGCAGATCTTTGACATCGATGCGGACACTGGTGCCATCGTGACTGGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | GATGGCACCAGTGTCCGCATCGATGTCAAAGATCTGCTCCAAATCCGAGTCCCGTCCACTGTGAAGTGGTaGTCGCCGTCCAGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: DGTSVRIDVKDLLQIRVPSTVKW*SPSSTL Trigger: CAGTGTGCTGGACGGCGAGCACCACTTCACAGTGGA...CGGGACTCGGATTTGGAGCAGATCTTTGACATCGATGCGGACACTGGTGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | ATCCGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCACTGTGTGGACCTGCTaGGACTCAAAGTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRTGQVPLLFPDIGHHCRTVWTC*DSKSRC Trigger: GCACCTGGACTTTGAGTCGCAGCAGGTCCACACAGT...GCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCTTGCCAGTCACGATGGCACCAGTGTCCGCATCGATGTCAAAGATCTACTGTGTGGACCTGCTaGGACTCAAAGTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAPCQSRWHQCPHRCQRSTVWTC*DSKSRC Trigger: GCACCTGGACTTTGAGTCGCAGCAGGTCCACACAGT...AGATCTTTGACATCGATGCGGACACTGGTGCCATCGTGACTGGCAAGGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| 3UTR CAA 72 bp | GCCCTTCCTTCATCTTTAATTGGATGCCAGAAAGCCTaGGGGTGGGCATGGCAGCAGCGCCCTCCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALPSSLIGCQKA*GWAWQQRPPLL Trigger: AAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCAAGGCTTTCTGGCATCCAATTAAAGATGAAGGAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | GAGCAAGTCACATCCACTTCTCTGGGGGAGCTTCCCCATCTGACACCTTCAAGAAACACGTCCTGCTCTTaGCGGTTGAAGCCCACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQVTSTSLGELPHLTPSRNTSCS*RLKPTC Trigger: GCACGTGGGCTTCAACCGGCAAGAGCAGGACGTGTT...TCTTGAAGGTGTCAGATGGGGAAGCTCCCCCAGAGAAGTGGATGTGACTTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | CTTGCCAGTCACGATGGCACCAGTGTCCGCATCGATGTCAAAGATCTGCTCCAAACGCGCACGATTGCCTaGTCTCGGAATGTGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LASHDGTSVRIDVKDLLQTRTIA*SRNVPR Trigger: CCTAGGCACATTCCGAGACCAGGCAATCGTGCGCGT...TTGGAGCAGATCTTTGACATCGATGCGGACACTGGTGCCATCGTGACTGGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR CCA 90 bp | ATCCGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCATGGTTTGGATGAGCTaGCCTGGCTTGGCGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IRTGQVPLLFPDIGHHCRMVWMS*PGLASS Trigger: TGAAGACGCCAAGCCAGGCCAGCTCATCCAAACCAT...GCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | AACACGTCCTGCTCTTGCCGGTTGAAGCCCACGTGCTGCGTGTGCACCGCAGCTTCCTGTATGCTGAACTaGTACATCTTTTGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NTSCSCRLKPTCCVCTAASCMLN*YIFCGK Trigger: CTTCCCACAAAAGATGTACCAGTTCAGCATACAGGA...AGCTGCGGTGCACACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGACGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGAGAAATGACATGACGTGCCCAAGGCCAGACAGCCGGTCAGTGCCAGAGGTTGCTAGGTGCTTCTaGTACCAGACGGAAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AQRNDMTCPRPDSRSVPEVARCF*YQTEIE Trigger: TTCTATTTCCGTCTGGTACCAGAAGCACCTAGCAAC...CTCTGGCACTGACCGGCTGTCTGGCCTTGGGCACGTCATGTCATTTCTCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | ACATTGGTCATCACTGCCGCGCCCCTGAGTCTTCCGCAAGATACACCCCTGGGACTGACTCCTGTATGCTaGACTGGTACATCTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLVITAAPLSLPQDTPLGLTPVC*TGTSFV Trigger: CACAAAAGATGTACCAGTTCAGCATACAGGAGTCAG...TCCCAGGGGTGTATCTTGCGGAAGACTCAGGGGCGCGGCAGTGATGACCAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | GAGCTTCCCCATCTGACACCTTCAAGACTCCACCTCATAGCTTTTCCAACAATGACGCGTCTCCTCCGCTaGCGCTCTCTTCTCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELPHLTPSRLHLIAFPTMTRLLR*RSLLSG Trigger: ACCTGAGAGAAGAGAGCGGCAGCGGAGGAGACGCGT...CATTGTTGGAAAAGCTATGAGGTGGAGTCTTGAAGGTGTCAGATGGGGAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR TCA 90 bp | CCCACGTGCTGCGTGTGCACCGCAGCTGTGTTATCTTCAATGTCCAGCAGAGAGCTGACTCCTGTATGCTaGACTGGTACATCTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTCCVCTAAVLSSMSSRELTPVC*TGTSFV Trigger: CACAAAAGATGTACCAGTTCAGCATACAGGAGTCAG...CTCTCTGCTGGACATTGAAGATAACACAGCTGCGGTGCACACGCAGCACGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR GCA 90 bp | GAGCTTCCCCATCTGACACCTTCAAGACTCCACCTCATAGCTTTTCCAACAATGAGGAGGAACACGTCCTaGTCTTGCCGGTTGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELPHLTPSRLHLIAFPTMRRNTS*SCRLKP Trigger: GGGCTTCAACCGGCAAGAGCAGGACGTGTTCCTCCT...CATTGTTGGAAAAGCTATGAGGTGGAGTCTTGAAGGTGTCAGATGGGGAAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | GAGCTTCCCCATCTGACACCTTCAAGACTCCACCTCATAGCTTTTCCAACAATGCCTTGCCAGTCACGATaGCACCAGTGTCCGCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ELPHLTPSRLHLIAFPTMPCQSR*HQCPHR Trigger: TCGATGCGGACACTGGTGCCATCGTGACTGGCAAGG...CATTGTTGGAAAAGCTATGAGGTGGAGTCTTGAAGGTGTCAGATGGGGAAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR GCA 90 bp | GCTTCCCCATCTGACACCTTCAAGACTCCACCTCATAGCTTTTCCAACAATGCATCAGAGGCCATCACCTaGATCACGGACGTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASPSDTFKTPPHSFSNNASEAIT*ITDVPV Trigger: TACAGGCACGTCCGTGATGCAGGTGATGGCCTCTGA...TGCATTGTTGGAAAAGCTATGAGGTGGAGTCTTGAAGGTGTCAGATGGGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | GAGCTTCCCCATCTGACACCTTCAAGACTCCACCTCATAGCTTTTCCAACAATGGTGGTGTTGCAGGACTaGATGGTACCGGAGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELPHLTPSRLHLIAFPTMVVLQD*MVPELS Trigger: TGACAGCTCCGGTACCATCCAGTCCTGCAACACCAC...CATTGTTGGAAAAGCTATGAGGTGGAGTCTTGAAGGTGTCAGATGGGGAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | GCTTCCCCATCTGACACCTTCAAGACTCCACCTCATAGCTTTTCCAACAATGCAGCCGTGGAGAAAGCGTaGTTCACTGTCGTTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASPSDTFKTPPHSFSNNAAVEKA*FTVVDV Trigger: GACATCAACGACAGTGAACCACGCTTTCTCCACGGC...TGCATTGTTGGAAAAGCTATGAGGTGGAGTCTTGAAGGTGTCAGATGGGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CCA 90 bp | GAGCAAGTCACATCCACTTCTCTGGGGGAGCTTCCCCATCTGACACCTTCAAGATCCTGTATGCTGAACTaGTACATCTTTTGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQVTSTSLGELPHLTPSRSCMLN*YIFCGK Trigger: CTTCCCACAAAAGATGTACCAGTTCAGCATACAGGA...TCTTGAAGGTGTCAGATGGGGAAGCTCCCCCAGAGAAGTGGATGTGACTTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS GCA 90 bp | GCGTCGGGGTCCCGCGCCGTCACCACGCCGACCAGGGAGCCCACCTaGGCGTCCTCCTGCACCTCCAGTAGGCCGGAGGGTGGCCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASGSRAVTTPTREPT*ASSCTSSRPEGGRN Trigger: GTTCCGGCCACCCTCCGGCCTACTGGAGGTGCAGGAGGACGCGCAGGTGGGCTCCCTGGTCGGCGTGGTGACGGCGCGGGACCCCGACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS GCA 90 bp | GCGCGGAGAAAGGCGAAGTCCTGCTCCGAGCCGGTCGAGCCGCTGTaGAGCGAGCTGAGCGAGGCGGCCGGCGAGCCCGCGCCCTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ARRKAKSCSEPVEPL*SELSEAAGEPAPSN Trigger: GTTCGAGGGCGCGGGCTCGCCGGCCGCCTCGCTCAGCTCGCTGCACAGCGGCTCGACCGGCTCGGAGCAGGACTTCGCCTTTCTCCGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS TCA 90 bp | AGGCGAAGTCCTGCTCCGAGCCGGTCGAGCCGCTGTGCAGCGAGCTaGGCGAGGCGGCCGGCGAGCCCGCGCCCTCGAACGCGTAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRSPAPSRSSRCAAS*ARRPASPRPRTRRS Trigger: AGACCTACGCGTTCGAGGGCGCGGGCTCGCCGGCCGCCTCGCTCAGCTCGCTGCACAGCGGCTCGACCGGCTCGGAGCAGGACTTCGCCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS GCA 90 bp | AGCGGTCGGAAGCGCGGGCCCCAGGCGCGGAGAAAGGCGAAGTCCTaGTCCGAGCCGGTCGAGCCGCTGTGCAGCGAGCTGAGCGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SGRKRGPQARRKAKS*SEPVEPLCSELSEA Trigger: CGCCTCGCTCAGCTCGCTGCACAGCGGCTCGACCGGCTCGGAGCAGGACTTCGCCTTTCTCCGCGCCTGGGGCCCGCGCTTCCGACCGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS TCA 90 bp | CTTCACTCGGCCTGCACCCAGCTGGTTGTCCTCCTGAGCCCCAGGTaGCAAAGAGGACGGGGCAGGTGTGCTTGCGGCCCACAGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LHSACTQLVVLLSPR*QRGRGRCACGPQVP Trigger: GGGCACCTGTGGGCCGCAAGCACACCTGCCCCGTCCTCTTTGTCACCTGGGGCTCAGGAGGACAACCAGCTGGGTGCAGGCCGAGTGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS TCA 90 bp | ACCCAACCGCGCTTCACTCGGCCTGCACCCAGCTGGTTGTCCTCCTaGGCCCCAGGTGACAAAGAGGACGGGGCAGGTGTGCTTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TQPRFTRPAPSWLSS*APGDKEDGAGVLAA Trigger: GGCCGCAAGCACACCTGCCCCGTCCTCTTTGTCACCTGGGGCTCAGGAGGACAACCAGCTGGGTGCAGGCCGAGTGAAGCGCGGTTGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS CCA 90 bp | CCGCATCGATGTCAAAGATCTGCTCCAAATCCGAGTCCCGATCAATaGCGTACCGGACGGGCCGGTTGGCGGCGTCGGGGTCCCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PHRCQRSAPNPSPDQ*RTGRAGWRRRGPAP Trigger: CGGCGCGGGACCCCGACGCCGCCAACCGGCCCGTCCGGTACGCCATTGATCGGGACTCGGATTTGGAGCAGATCTTTGACATCGATGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CAA 90 bp | GGGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCCCTCCCGTCGGGCTGCGCTACAAAGGCGGTGGTGTaGCAGGACTGGATGGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: GNVSRSRDPADPLPSGCATKAVV*QDWMVP Trigger: CGGTACCATCCAGTCCTGCAACACCACCGCCTTTGT...AGCGCAGCCCGACGGGAGGGGATCTGCAGGGTCCCTGCTCCGCGACACGTTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CAA 90 bp | GTGAGGGTGCCCGTGCTGCTCAGGGTGGGTGGCCCGCTGTCCACAACGAGGATGCGGGGGTCCACAAACTaGTTGAGGGCTTCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VRVPVLLRVGGPLSTTRMRGSTN*LRASST Trigger: GGTGCTGGAAGCCCTCAACAAGTTTGTGGACCCCCG...CATCCTCGTTGTGGACAGCGGGCCACCCACCCTGAGCAGCACGGGCACCCTCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
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| CDS-3UTR CAA 90 bp | GGGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCCCTCCCGTCGGGCTGCGCTCACCACACTGATGGTTaGGATGAGCTGGCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GNVSRSRDPADPLPSGCAHHTDG*DELAWL Trigger: AAGCCAGGCCAGCTCATCCAAACCATCAGTGTGGTG...AGCGCAGCCCGACGGGAGGGGATCTGCAGGGTCCCTGCTCCGCGACACGTTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS-3UTR CAA 90 bp | GGGTTCCCCTACCGTGGTCCTGTCCAACCCCAGATCCGCACAGGCCAGGTTCCCTCCTGCTCTTGCCGGTaGAAGCCCACGTGCTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFPYRGPVQPQIRTGQVPSCSCR*KPTCCV Trigger: CACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGA...GGGAACCTGGCCTGTGCGGATCTGGGGTTGGACAGGACCACGGTAGGGGAACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS GCA 90 bp | CCAGGTGACAAAGAGGACGGGGCAGGTGTGCTTGCGGCCCACAGGTaGCCCAGCAGCGGTAGCAGTAGCAGAAACAGCAGCACAGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGDKEDGAGVLAAHR*PSSGSSSRNSSTGD Trigger: GTCGCCTGTGCTGCTGTTTCTGCTACTGCTACCGCTGCTGGGGCACCTGTGGGCCGCAAGCACACCTGCCCCGTCCTCTTTGTCACCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS-3UTR CAA 90 bp | AAGATACACCCCTGGGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCCCTCCCCGGGGGTCCACAAACTaGTTGAGGGCTTCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: KIHPWERVAEQGPCRSPPRGSTN*LRASST Trigger: GGTGCTGGAAGCCCTCAACAAGTTTGTGGACCCCCG...GGGAGGGGATCTGCAGGGTCCCTGCTCCGCGACACGTTCCCAGGGGTGTATCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS-3UTR CAA 90 bp | TCCTGCTCTTGCCGGTTGAAGCCCACGTGCTGCGTGTGCACCGCAGCTGTGTTACGGCCACGCGCACGATaGCCTGGTCTCGGAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSCRLKPTCCVCTAAVLRPRAR*PGLGMC Trigger: GCACATTCCGAGACCAGGCAATCGTGCGCGTGGCCG...TAACACAGCTGCGGTGCACACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
||
| CDS-3UTR CAA 90 bp | AAGATACACCCCTGGGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCCCTCCCGAACACGTCCTGCTCTaGCCGGTTGAAGCCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: KIHPWERVAEQGPCRSPPEHVLL*PVEAHV Trigger: CACGTGGGCTTCAACCGGCAAGAGCAGGACGTGTTC...GGGAGGGGATCTGCAGGGTCCCTGCTCCGCGACACGTTCCCAGGGGTGTATCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CAA 90 bp | GATGGGCAGGAGGAACACGTCCTGCTCTTGCCGGTTGAAGCCCACGTGCTGCGTGGGAAGCGGGGTGGGTaGTCGTTGACGTCAGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: DGQEEHVLLLPVEAHVLRGKRGG*SLTSVT Trigger: GGTTACTGACGTCAACGACAACCCACCCCGCTTCCC...ACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGACGTGTTCCTCCTGCCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
||
| CDS TCA 90 bp | CTCTTCTCTCAGGTGATAAGTCATGTCCGTGTTCTCGCCCACATCTaGGTCCTCGGCCTTCACGCGGCCCACAGCCGTACCGATGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFSQVISHVRVLAHI*VLGLHAAHSRTDGG Trigger: GCCCCCATCGGTACGGCTGTGGGCCGCGTGAAGGCCGAGGACTCAGATGTGGGCGAGAACACGGACATGACTTATCACCTGAGAGAAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
||
| CDS-3UTR CAA 90 bp | TTCCGCAAGATACACCCCTGGGAACGTGTCGCGGAGCAGGGACCCTGCAGATCCCGGATCACACCTGTCTaGGGGTCCACTGTGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FRKIHPWERVAEQGPCRSRITPV*GSTVKW Trigger: CCACTTCACAGTGGACCCCAAGACAGGTGTGATCCG...GGATCTGCAGGGTCCCTGCTCCGCGACACGTTCCCAGGGGTGTATCTTGCGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS-3UTR CAA 90 bp | AGGTCCGCGTCCGCCAGCGCCACCTTGCGGCTGATGAAGTCCCTGAACACCGAGTGCCATGTCTGTGGCTaGAATAACCACCTCGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RSASASATLRLMKSLNTECHVCG*NNHLVA Trigger: CGCTACGAGGTGGTTATTCAAGCCACAGACATGGCA...CTCGGTGTTCAGGGACTTCATCAGCCGCAAGGTGGCGCTGGCGGACGCGGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAGAGAAATGACATGACGTGCCCAAGGCCAGACAGCCGGTCAGTGCCAGAGGCGAGCTCCGGGGGATaGTCGTTCACGTCCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: AQRNDMTCPRPDSRSVPEASSGG*SFTSRI Trigger: AATCCTGGACGTGAACGACAATCCCCCGGAGCTCGC...CTCTGGCACTGACCGGCTGTCTGGCCTTGGGCACGTCATGTCATTTCTCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CAA 90 bp | TGGGGTGGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATTGTCCTTTATGAGCTGGCCTGGCTaGGCGTCTTCACACACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WGGHGSSALLCFPLPLSFMSWPG*ASSHTA Trigger: AGCTGTGTGTGAAGACGCCAAGCCAGGCCAGCTCAT...AAAGGACAATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS-3UTR CAA 90 bp | ATCCGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCTCCGCCAGCGCCACCTaGCGGCTGATGAAGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IRTGQVPLLFPDIGHHCRSASAT*RLMKSL Trigger: CAGGGACTTCATCAGCCGCAAGGTGGCGCTGGCGGA...GCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS-3UTR CAA 90 bp | TCCTGCTCTTGCCGGTTGAAGCCCACGTGCTGCGTGTGCACCGCAGCTGTGTTACGGATCACACCTGTCTaGGGGTCCACTGTGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCSCRLKPTCCVCTAAVLRITPV*GSTVKW Trigger: CCACTTCACAGTGGACCCCAAGACAGGTGTGATCCG...TAACACAGCTGCGGTGCACACGCAGCACGTGGGCTTCAACCGGCAAGAGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCGCCCTGGGGCTCGTCTCTGTCCACCACACTGATGGTTTGGATGAGCTGGGGGTCCACAAACTTGTaGAGGGCTTCCAGCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: WPPWGSSLSTTLMVWMSWGSTNL*RASSTT Trigger: AGTGGTGCTGGAAGCCCTCAACAAGTTTGTGGACCC...CCAGCTCATCCAAACCATCAGTGTGGTGGACAGAGACGAGCCCCAGGGCGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138643.2 |
||
| CDS TCA 90 bp | CTCGGAATGTGCCTAGGTCGGCGAAGCGGGGGTCCACAAACTTGTTaGGGGCTTCCAGCACCACTGTGTGGACCTGCTGCGACTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGMCLGRRSGGPQTC*GLPAPLCGPAATQS Trigger: ACTTTGAGTCGCAGCAGGTCCACACAGTGGTGCTGGAAGCCCTCAACAAGTTTGTGGACCCCCGCTTCGCCGACCTAGGCACATTCCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS GCA 90 bp | TTGCCAGTCACGATGGCACCAGTGTCCGCATCGATGTCAAAGATCTaGTCCAAATCCGAGTCCCGATCAATGGCGTACCGGACGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPVTMAPVSASMSKI*SKSESRSMAYRTGR Trigger: CCGGCCCGTCCGGTACGCCATTGATCGGGACTCGGATTTGGAGCAGATCTTTGACATCGATGCGGACACTGGTGCCATCGTGACTGGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CAA 90 bp | TCCCATTGTCCTTTCCCAGAGCCGGGTTCCCCTACCGTGGTCCTGTCCAACCCCTGCCATGTCTGTGGCTaGAATAACCACCTCGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SHCPFPEPGSPTVVLSNPCHVCG*NNHLVA Trigger: CGCTACGAGGTGGTTATTCAAGCCACAGACATGGCA...GGGGTTGGACAGGACCACGGTAGGGGAACCCGGCTCTGGGAAAGGACAATGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS-3UTR CAA 90 bp | ATCCGCACAGGCCAGGTTCCCCTCCTTTTTCCTGACATTGGTCATCACTGCCGCGGGAAGCGGGGTGGGTaGTCGTTGACGTCAGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: IRTGQVPLLFPDIGHHCRGKRGG*SLTSVT Trigger: GGTTACTGACGTCAACGACAACCCACCCCGCTTCCC...GCGGCAGTGATGACCAATGTCAGGAAAAAGGAGGGGAACCTGGCCTGTGCGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CAA 90 bp | GCCCAGAGAAATGACATGACGTGCCCAAGGCCAGACAGCCGGTCAGTGCCAGAGGGGTCCACAAACTTGTaGAGGGCTTCCAGCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: AQRNDMTCPRPDSRSVPEGSTNL*RASSTT Trigger: AGTGGTGCTGGAAGCCCTCAACAAGTTTGTGGACCC...CTCTGGCACTGACCGGCTGTCTGGCCTTGGGCACGTCATGTCATTTCTCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS-3UTR CAA 90 bp | GAGCAAGTCACATCCACTTCTCTGGGGGAGCTTCCCCATCTGACACCTTCAAGACGGCCACGCGCACGATaGCCTGGTCTCGGAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EQVTSTSLGELPHLTPSRRPRAR*PGLGMC Trigger: GCACATTCCGAGACCAGGCAATCGTGCGCGTGGCCG...TCTTGAAGGTGTCAGATGGGGAAGCTCCCCCAGAGAAGTGGATGTGACTTGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS TCA 90 bp | CAATCAGGAAGATGGTCCCTGCACCCTCGCCCGAGATGGTGTACTTaGTGGTCCCGTCCCCTTCGTCAGAATCCGAGTGGATCTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSGRWSLHPRPRWCT*WSRPLRQNPSGSCP Trigger: TGGGCAAGATCCACTCGGATTCTGACGAAGGGGACGGGACCATCAAGTACACCATCTCGGGCGAGGGTGCAGGGACCATCTTCCTGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS TCA 90 bp | TGCGACTCAAAGTCCAGGTGCTTCTGCACCACTATGATGGCTTCCTaGGTGTCGCTGTCCGTGGTGACCTTGAACGCGTCTCCTCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CDSKSRCFCTTMMAS*VSLSVVTLNASPPL Trigger: CAGCGGAGGAGACGCGTTCAAGGTCACCACGGACAGCGACACTCAGGAAGCCATCATAGTGGTGCAGAAGCACCTGGACTTTGAGTCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS GCA 90 bp | GGCATGGATGTCACCTGTCAACTCGTCAATCAGGAAGATGGTCCCTaGACCCTCGCCCGAGATGGTGTACTTGATGGTCCCGTCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GMDVTCQLVNQEDGP*TLARDGVLDGPVPF Trigger: GAAGGGGACGGGACCATCAAGTACACCATCTCGGGCGAGGGTGCAGGGACCATCTTCCTGATTGACGAGTTGACAGGTGACATCCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS CCA 90 bp | CCCGGAGTGTGTAGAAGGTTTTCTGCTCCCGGTCCAGGCGCTCCGTaGCATGGATGTCACCTGTCAACTCGTCAATCAGGAAGATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGVCRRFSAPGPGAP*HGCHLSTRQSGRWS Trigger: GGACCATCTTCCTGATTGACGAGTTGACAGGTGACATCCATGCCACGGAGCGCCTGGACCGGGAGCAGAAAACCTTCTACACACTCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS-3UTR CAA 90 bp | TGGGGTGGGCATGGCAGCAGCGCCCTCCTCTGCTTTCCCCTCCCATTGTCCTTTCCCTCGTCGTTGTATTaGATCACATTGTCCCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: WGGHGSSALLCFPLPLSFPSSLY*ITLSRM Trigger: CATGCGGGACAATGTGATCAAATACAACGACGAGGG...AAAGGACAATGGGAGGGGAAAGCAGAGGAGGGCGCTGCTGCCATGCCCACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS GCA 90 bp | GGGTCCACAAACTTGTTGAGGGCTTCCAGCACCACTGTGTGGACCTaGTGCGACTCAAAGTCCAGGTGCTTCTGCACCACTATGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSTNLLRASSTTVWT*CDSKSRCFCTTMMA Trigger: AGCCATCATAGTGGTGCAGAAGCACCTGGACTTTGAGTCGCAGCAGGTCCACACAGTGGTGCTGGAAGCCCTCAACAAGTTTGTGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS-3UTR CAA 90 bp | GAGCAAGTCACATCCACTTCTCTGGGGGAGCTTCCCCATCTGACACCTTCAAGACGGGGTGGGTTGTCGTaGACGTCAGTAACCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: EQVTSTSLGELPHLTPSRRGGLS*TSVTTM Trigger: CATCGTGGTTACTGACGTCAACGACAACCCACCCCG...TCTTGAAGGTGTCAGATGGGGAAGCTCCCCCAGAGAAGTGGATGTGACTTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS GCA 90 bp | TCCACAAACTTGTTGAGGGCTTCCAGCACCACTGTGTGGACCTGCTaGGACTCAAAGTCCAGGTGCTTCTGCACCACTATGATGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: STNLLRASSTTVWTC*DSKSRCFCTTMMAS Trigger: GGAAGCCATCATAGTGGTGCAGAAGCACCTGGACTTTGAGTCGCAGCAGGTCCACACAGTGGTGCTGGAAGCCCTCAACAAGTTTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS-3UTR CAA 90 bp | GCTTCCCCATCTGACACCTTCAAGACTCCACCTCATAGCTTTTCCAACAATGCATCACGGTCCAGCCCCTaGCCAGTCACGATGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: ASPSDTFKTPPHSFSNNASRSSP*PVTMAP Trigger: TGGTGCCATCGTGACTGGCAAGGGGCTGGACCGTGA...TGCATTGTTGGAAAAGCTATGAGGTGGAGTCTTGAAGGTGTCAGATGGGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS TCA 72 bp | CCTGCTCCGAGCCGGTCGAGCCGCTGTGCAGCGAGCTaGGCGAGGCGGCCGGCGAGCCCGCGCCCTCGAACG | + |
|
Preference number: 6 (lower is better) Translates to: PAPSRSSRCAAS*ARRPASPRPRT Trigger: CGTTCGAGGGCGCGGGCTCGCCGGCCGCCTCGCTCAGCTCGCTGCACAGCGGCTCGACCGGCTCGGAGCAGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS GCA 72 bp | AAGGCGAAGTCCTGCTCCGAGCCGGTCGAGCCGCTGTaGAGCGAGCTGAGCGAGGCGGCCGGCGAGCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: KAKSCSEPVEPL*SELSEAAGEPA Trigger: CGCGGGCTCGCCGGCCGCCTCGCTCAGCTCGCTGCACAGCGGCTCGACCGGCTCGGAGCAGGACTTCGCCTT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS CCA 72 bp | CCGAGTCCCGATCAATGGCGTACCGGACGGGCCGGTTaGCGGCGTCGGGGTCCCGCGCCGTCACCACGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: PSPDQWRTGRAG*RRRGPAPSPRR Trigger: TCGGCGTGGTGACGGCGCGGGACCCCGACGCCGCCAACCGGCCCGTCCGGTACGCCATTGATCGGGACTCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS CAA 72 bp | TCCGAGTCCCGATCAATGGCGTACCGGACGGGCCGGTaGGCGGCGTCGGGGTCCCGCGCCGTCACCACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SESRSMAYRTGR*AASGSRAVTTP Trigger: CGGCGTGGTGACGGCGCGGGACCCCGACGCCGCCAACCGGCCCGTCCGGTACGCCATTGATCGGGACTCGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS GCA 72 bp | TCCCGCGCCGTCACCACGCCGACCAGGGAGCCCACCTaGGCGTCCTCCTGCACCTCCAGTAGGCCGGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRAVTTPTREPT*ASSCTSSRPEG Trigger: ACCCTCCGGCCTACTGGAGGTGCAGGAGGACGCGCAGGTGGGCTCCCTGGTCGGCGTGGTGACGGCGCGGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS GCA 72 bp | ACCACGCCGACCAGGGAGCCCACCTGCGCGTCCTCCTaGACCTCCAGTAGGCCGGAGGGTGGCCGGAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: TTPTREPTCASS*TSSRPEGGRNS Trigger: CGAGTTCCGGCCACCCTCCGGCCTACTGGAGGTGCAGGAGGACGCGCAGGTGGGCTCCCTGGTCGGCGTGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS GCA 72 bp | AAGCGCGGGCCCCAGGCGCGGAGAAAGGCGAAGTCCTaGTCCGAGCCGGTCGAGCCGCTGTGCAGCGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KRGPQARRKAKS*SEPVEPLCSEL Trigger: CAGCTCGCTGCACAGCGGCTCGACCGGCTCGGAGCAGGACTTCGCCTTTCTCCGCGCCTGGGGCCCGCGCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS TCA 72 bp | GCCTGCACCCAGCTGGTTGTCCTCCTGAGCCCCAGGTaGCAAAGAGGACGGGGCAGGTGTGCTTGCGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ACTQLVVLLSPR*QRGRGRCACGP Trigger: TGGGCCGCAAGCACACCTGCCCCGTCCTCTTTGTCACCTGGGGCTCAGGAGGACAACCAGCTGGGTGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS TCA 72 bp | CGCTTCACTCGGCCTGCACCCAGCTGGTTGTCCTCCTaGGCCCCAGGTGACAAAGAGGACGGGGCAGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RFTRPAPSWLSS*APGDKEDGAGV Trigger: CACACCTGCCCCGTCCTCTTTGTCACCTGGGGCTCAGGAGGACAACCAGCTGGGTGCAGGCCGAGTGAAGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS CCA 72 bp | TCATCCACATCGGTCACGGCCACGCGCACGATTGCCTaGTCTCGGAATGTGCCTAGGTCGGCGAAGCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSTSVTATRTIA*SRNVPRSAKRG Trigger: CCCCCGCTTCGCCGACCTAGGCACATTCCGAGACCAGGCAATCGTGCGCGTGGCCGTGACCGATGTGGATGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS GCA 72 bp | AAAGAGGACGGGGCAGGTGTGCTTGCGGCCCACAGGTaGCCCAGCAGCGGTAGCAGTAGCAGAAACAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KEDGAGVLAAHR*PSSGSSSRNSS Trigger: GCTGCTGTTTCTGCTACTGCTACCGCTGCTGGGGCACCTGTGGGCCGCAAGCACACCTGCCCCGTCCTCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS CAA 72 bp | GGGCTCCAGCAGACGGTTGGTGGCTCGATCCCTGGCTaGGGCCCGGAGTGTGTAGAAGGTTTTCTGCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GLQQTVGGSIPG*GPECVEGFLLP Trigger: CGGGAGCAGAAAACCTTCTACACACTCCGGGCCCAAGCCAGGGATCGAGCCACCAACCGTCTGCTGGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
||
| CDS CAA 72 bp | GGGGTTCATCCACATCGGTCACGGCCACGCGCACGATaGCCTGGTCTCGGAATGTGCCTAGGTCGGCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GVHPHRSRPRAR*PGLGMCLGRRS Trigger: GCTTCGCCGACCTAGGCACATTCCGAGACCAGGCAATCGTGCGCGTGGCCGTGACCGATGTGGATGAACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
||
| CDS TCA 72 bp | TGCCTAGGTCGGCGAAGCGGGGGTCCACAAACTTGTTaGGGGCTTCCAGCACCACTGTGTGGACCTGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: CLGRRSGGPQTC*GLPAPLCGPAA Trigger: CGCAGCAGGTCCACACAGTGGTGCTGGAAGCCCTCAACAAGTTTGTGGACCCCCGCTTCGCCGACCTAGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
||
| CDS GCA 72 bp | TCACGGCCACGCGCACGATTGCCTGGTCTCGGAATGTaGCTAGGTCGGCGAAGCGGGGGTCCACAAACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRPRARLPGLGM*LGRRSGGPQTC Trigger: ACAAGTTTGTGGACCCCCGCTTCGCCGACCTAGGCACATTCCGAGACCAGGCAATCGTGCGCGTGGCCGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
||
| CDS CCA 72 bp | TGTCAAAGATCTGCTCCAAATCCGAGTCCCGATCAATaGCGTACCGGACGGGCCGGTTGGCGGCGTCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CQRSAPNPSPDQ*RTGRAGWRRRG Trigger: ACCCCGACGCCGCCAACCGGCCCGTCCGGTACGCCATTGATCGGGACTCGGATTTGGAGCAGATCTTTGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
||
| CDS TCA 72 bp | CGGCTGTCCGGATCACACCTGTCTTGGGGTCCACTGTaGAGTGGTGCTCGCCGTCCAGCACACTGTACACCA | + |
|
Preference number: 6 (lower is better) Translates to: RLSGSHLSWGPL*SGARRPAHCTP Trigger: TGGTGTACAGTGTGCTGGACGGCGAGCACCACTTCACAGTGGACCCCAAGACAGGTGTGATCCGGACAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
||
| CDS CAA 90 bp | TGGTCTCGGAATGTGCCTAGGTCGGCGAAGCGGGGGTCCACAAACTaGTTGAGGGCTTCCAGCACCACTGTGTGGACCTGCTGCGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: WSRNVPRSAKRGSTN*LRASSTTVWTCCDS Trigger: TGAGTCGCAGCAGGTCCACACAGTGGTGCTGGAAGCCCTCAACAAGTTTGTGGACCCCCGCTTCGCCGACCTAGGCACATTCCGAGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
||
| CDS TCA 72 bp | AGATGGTCCCTGCACCCTCGCCCGAGATGGTGTACTTaGTGGTCCCGTCCCCTTCGTCAGAATCCGAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RWSLHPRPRWCT*WSRPLRQNPSG Trigger: TCCACTCGGATTCTGACGAAGGGGACGGGACCATCAAGTACACCATCTCGGGCGAGGGTGCAGGGACCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
||
| CDS TCA 72 bp | GACGTCAGTAACCACGATGGTGACTGTAGTGGAACCTaGGAGGCCACCCAGCTGGCCTGCCATGTCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: DVSNHDGDCSGT*EATQLACHVCG Trigger: GCCACAGACATGGCAGGCCAGCTGGGTGGCCTCTCAGGTTCCACTACAGTCACCATCGTGGTTACTGACGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS TCA 72 bp | GGCCTTCACGCGGCCCACAGCCGTACCGATGGGGGCTaGCTCCTGTATGCTGAACTGGTACATCTTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GLHAAHSRTDGG*LLYAELVHLLW Trigger: CCACAAAAGATGTACCAGTTCAGCATACAGGAGTCAGCCCCCATCGGTACGGCTGTGGGCCGCGTGAAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS CAA 90 bp | TCTCGGAATGTGCCTAGGTCGGCGAAGCGGGGGTCCACAAACTTGTaGAGGGCTTCCAGCACCACTGTGTGGACCTGCTGCGACTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SRNVPRSAKRGSTNL*RASSTTVWTCCDSK Trigger: CTTTGAGTCGCAGCAGGTCCACACAGTGGTGCTGGAAGCCCTCAACAAGTTTGTGGACCCCCGCTTCGCCGACCTAGGCACATTCCGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS GCA 72 bp | GTCACCTGTCAACTCGTCAATCAGGAAGATGGTCCCTaGACCCTCGCCCGAGATGGTGTACTTGATGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: VTCQLVNQEDGP*TLARDGVLDGP Trigger: GGGACCATCAAGTACACCATCTCGGGCGAGGGTGCAGGGACCATCTTCCTGATTGACGAGTTGACAGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS TCA 72 bp | AAGTCCAGGTGCTTCTGCACCACTATGATGGCTTCCTaGGTGTCGCTGTCCGTGGTGACCTTGAACGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: KSRCFCTTMMAS*VSLSVVTLNAS Trigger: AGACGCGTTCAAGGTCACCACGGACAGCGACACTCAGGAAGCCATCATAGTGGTGCAGAAGCACCTGGACTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS GCA 72 bp | ACGATGGCACCAGTGTCCGCATCGATGTCAAAGATCTaGTCCAAATCCGAGTCCCGATCAATGGCGTACCGG | + |
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Preference number: 6 (lower is better) Translates to: TMAPVSASMSKI*SKSESRSMAYR Trigger: CCGGTACGCCATTGATCGGGACTCGGATTTGGAGCAGATCTTTGACATCGATGCGGACACTGGTGCCATCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065438.13 |
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| CDS CCA 72 bp | AAGGTTTTCTGCTCCCGGTCCAGGCGCTCCGTGGCATaGATGTCACCTGTCAACTCGTCAATCAGGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: KVFCSRSRRSVA*MSPVNSSIRKM Trigger: CATCTTCCTGATTGACGAGTTGACAGGTGACATCCATGCCACGGAGCGCCTGGACCGGGAGCAGAAAACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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| CDS CCA 72 bp | TGTAGAAGGTTTTCTGCTCCCGGTCCAGGCGCTCCGTaGCATGGATGTCACCTGTCAACTCGTCAATCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CRRFSAPGPGAP*HGCHLSTRQSG Trigger: TCCTGATTGACGAGTTGACAGGTGACATCCATGCCACGGAGCGCCTGGACCGGGAGCAGAAAACCTTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065438.13 ENSMUST00000138643.2 |
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