Pregenerated sensors for CDH20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050840Ensembl transcript IDs: ENSMUST00000062528.9
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGTCCAGCACAATATTGCTCCTGGGGTGGCCGCGCCTCGGGCATaGGAAGCAGCCTTTGAGAACGTCTGGATTTGGGTGCCCCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: TVQHNIAPGVAAPRA*EAAFENVWIWVPLC Trigger: GCAAAGGGGCACCCAAATCCAGACGTTCTCAAAGGCTGCTTCTCATGCCCGAGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR CCA 90 bp | CACTCACTCCCATCCTCACTGTCCAGCACAATATTGCTCCTGGGGTaGCCGCGCCTCGGGCATGAGAAGCAGCCTTTGAGAACGTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: HSLPSSLSSTILLLG*PRLGHEKQPLRTSG Trigger: TCCAGACGTTCTCAAAGGCTGCTTCTCATGCCCGAGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGTTTCTGCAGATCTaGCGATGCAGAAAAACTAGAGTAGGACTTGCTCCCTGCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCWFLQI*RCRKTRVGLAPCLH Trigger: GTGGAGGCAGGGAGCAAGTCCTACTCTAGTTTTTCTGCATCGTCAGATCTGCAGAAACCAACACACACACACACACACACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR GCA 90 bp | TTGCATCTGATCTCCACATTTGGCACTCAGAAGAGACATCTACAGTaGACGAGGCAGCTTTTCTGCTTTCCTTCTGGCTTTTACGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: LHLISTFGTQKRHLQ*TRQLFCFPSGFYEG Trigger: GCCTTCGTAAAAGCCAGAAGGAAAGCAGAAAAGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAATGTGGAGATCAGATGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR CCA 90 bp | ATACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTaGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: ILLIWLSFVASDLHI*HSEETSTVHEAAFL Trigger: CAGAAAAGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR CAA 90 bp | CTCTGCTGGGTCCACTCACTCCCATCCTCACTGTCCAGCACAATATaGCTCCTGGGGTGGCCGCGCCTCGGGCATGAGAAGCAGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LCWVHSLPSSLSSTI*LLGWPRLGHEKQPL Trigger: CAAAGGCTGCTTCTCATGCCCGAGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAGTGGACCCAGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR-3UTR CCA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCGCCTTTGAGAACGTCTaGATTTGGGTGCCCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: WISYNANSLFSSYMRAHVAFENV*IWVPLC Trigger: GCAAAGGGGCACCCAAATCCAGACGTTCTCAAAGGC...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR-3UTR GCA 90 bp | TACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAGGTAGGACTTGCTCCCTaGCTCCACTCCCGCCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: YFLFGFLLLHLISTFGTQVGLAP*LHSRPH Trigger: GTGAGGGCGGGAGTGGAGGCAGGGAGCAAGTCCTAC...CTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCACATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTTTTCTGGTGTGTGTTGGTTTCTaGAGATCTGACGATGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LHIWHSEETSTVHEAAFLVCVGF*RSDDAE Trigger: TTCTGCATCGTCAGATCTGCAGAAACCAACACACAC...CAGAAAAGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAATGTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR-3UTR CCA 90 bp | ATACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAGAGAACGTCTGGATTTaGGTGCCCCTTTGCCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: ILLIWLSFVASDLHIWHSENVWI*VPLCLR Trigger: CCGGAGGCAAAGGGGCACCCAAATCCAGACGTTCTC...TGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR-3UTR GCA 90 bp | TACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAGGGTAATTGGAGATTCTaGCCTCTTCTCCTGGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: YFLFGFLLLHLISTFGTQGNWRF*PLLLGF Trigger: GAAACCCAGGAGAAGAGGGCAGAATCTCCAATTACC...CTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR CAA 90 bp | CTAACCCATGCTTTTATCAGATACTTCTTATTTGGCTTTCTTTTGTaGCATCTGATCTCCACATTTGGCACTCAGAAGAGACATCTACAG | + |
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Preference number: 2 (lower is better) Translates to: LTHAFIRYFLFGFLL*HLISTFGTQKRHLQ Trigger: CTGTAGATGTCTCTTCTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTATCTGATAAAAGCATGGGTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR TCA 72 bp | TGGGGTGGCCGCGCCTCGGGCATGAGAAGCAGCCTTTaGGAACGTCTGGATTTGGGTGCCCCTTTGCCTCCG | + |
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Preference number: 3 (lower is better) Translates to: WGGRASGMRSSL*ERLDLGAPLPP Trigger: CGGAGGCAAAGGGGCACCCAAATCCAGACGTTCTCAAAGGCTGCTTCTCATGCCCGAGGCGCGGCCACCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR GCA 72 bp | TCCACTCACTCCCATCCTCACTGTCCAGCACAATATTaGTCCTGGGGTGGCCGCGCCTCGGGCATGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: STHSHPHCPAQY*SWGGRASGMRS Trigger: GCTTCTCATGCCCGAGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR CCA 72 bp | CACTCCCATCCTCACTGTCCAGCACAATATTGCTCCTaGGGTGGCCGCGCCTCGGGCATGAGAAGCAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: HSHPHCPAQYCS*GGRASGMRSSL Trigger: AAGGCTGCTTCTCATGCCCGAGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR TCA 72 bp | CACAATATTGCTCCTGGGGTGGCCGCGCCTCGGGCATaGGAAGCAGCCTTTGAGAACGTCTGGATTTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: HNIAPGVAAPRA*EAAFENVWIWV Trigger: CACCCAAATCCAGACGTTCTCAAAGGCTGCTTCTCATGCCCGAGGCGCGGCCACCCCAGGAGCAATATTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR GCA 72 bp | CCGCACACTAACGTGTTGATGCTGGATCAGCTACAATaGGAACTCTCTGTTCAGCTCTTACATGAGAGCACA | + |
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Preference number: 3 (lower is better) Translates to: PHTNVLMLDQLQ*ELSVQLLHEST Trigger: TGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCAGCATCAACACGTTAGTGTGCGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR TCA 72 bp | TGTGTGTGTGTGTGTGTGTGTTGGTTTCTGCAGATCTaGCGATGCAGAAAAACTAGAGTAGGACTTGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCWFLQI*RCRKTRVGLAP Trigger: GGGAGCAAGTCCTACTCTAGTTTTTCTGCATCGTCAGATCTGCAGAAACCAACACACACACACACACACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR CCA 72 bp | ATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTaGCACTCAGAAGAGACATCTACAGTGCACGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: IWLSFVASDLHI*HSEETSTVHEA Trigger: TGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | CTCACTCCCATCCTCACTGTCCAGCACAATATTGCTCCTGGGGTGGCCGCGCCTGCTGGCCCTGGAGAATaGTGTACACTACCCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LTPILTVQHNIAPGVAAPAGPGE*CTLPGH Trigger: GTGCCCGGGTAGTGTACAGCATTCTCCAGGGCCAGC...AGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | CTCACTCCCATCCTCACTGTCCAGCACAATATTGCTCCTGGGGTGGCCGCGCCTCGGCCTCGTAGAGCTTaGCCAGCACGTAGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LTPILTVQHNIAPGVAAPRPRRA*PARSCG Trigger: TCCACAGCTACGTGCTGGCCAAGCTCTACGAGGCCG...AGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| 3UTR CAA 72 bp | GTCCACTCACTCCCATCCTCACTGTCCAGCACAATATaGCTCCTGGGGTGGCCGCGCCTCGGGCATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VHSLPSSLSSTI*LLGWPRLGHEK Trigger: CTTCTCATGCCCGAGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAGTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | CTCACTCCCATCCTCACTGTCCAGCACAATATTGCTCCTGGGGTGGCCGCGCCTGGGGTCCCCAGTCCGTaGGGAAATCAAAGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LTPILTVQHNIAPGVAAPGVPSP*GNQSSA Trigger: AGCAGAGCTTTGATTTCCTCACGGACTGGGGACCCC...AGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | CTCACTCCCATCCTCACTGTCCAGCACAATATTGCTCCTGGGGTGGCCGCGCCTATCTTCCCGGGTCGCTaGCTCTGTCAATGGAGTACC | + |
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Preference number: 4 (lower is better) Translates to: LTPILTVQHNIAPGVAAPIFPGR*LCQWST Trigger: GGTACTCCATTGACAGAGGCAGCGACCCGGGAAGAT...AGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | ATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTTTTCTGCTTTCCTCGGGGAGCATGTCCTaGCGCGTCTTGGGGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: IWHSEETSTVHEAAFLLSSGSMS*RVLGAA Trigger: CGCCGCCCCCAAGACGCGCCAGGACATGCTCCCCGA...GGAAAGCAGAAAAGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | CTCACTCCCATCCTCACTGTCCAGCACAATATTGCTCCTGGGGTGGCCGCGCCTTCTCTAGGTGAGGATTaGATCCTTCCACCTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LTPILTVQHNIAPGVAAPSLGED*ILPPSG Trigger: CCCTGAAGGTGGAAGGATCCAATCCTCACCTAGAGA...AGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | TGGCCGCGCCTCGGGCATGAGAAGCAGCCTTTGAGAACGTCTGGATTTGGGTGCTCTCATCGTCGTCGATaGTGTAGGGTTGTTTGCGAT | + |
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Preference number: 4 (lower is better) Translates to: WPRLGHEKQPLRTSGFGCSHRRR*CRVVCD Trigger: ATCGCAAACAACCCTACATCATCGACGACGATGAGA...GCACCCAAATCCAGACGTTCTCAAAGGCTGCTTCTCATGCCCGAGGCGCGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | CTCACTCCCATCCTCACTGTCCAGCACAATATTGCTCCTGGGGTGGCCGCGCCTGCCCTTAGAGTATATTaGGCTCTTTCTTCTCGGTCG | + |
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Preference number: 4 (lower is better) Translates to: LTPILTVQHNIAPGVAAPALRVY*ALSSRS Trigger: CGACCGAGAAGAAAGAGCCCAATATACTCTAAGGGC...AGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | AATTTTTCAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGACTGCAGGGAGCTaGGCGAGCCGGCCACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: NFSVVCVCVCVCVCVCVCLTAGS*ASRPQS Trigger: GCTCTGTGGCCGGCTCGCTCAGCTCCCTGCAGTCAG...ACACACACACACACACACACACACACACACACACACACACACCACTGAAAAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCGGCCGCTGTCTGCGATaGGGATGGGCAGGTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: WISYNANSLFSSYMRAHVGRCLR*GWAGRR Trigger: TCTTCTACCTGCCCATCCTCATCGCAGACAGCGGCC...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | GGATTGACTTTACACAGATTAGGAAAGCCCTCTAACCCATGCTTTTATCAGATAGCGTGCCGGTGCTGCTaGGGACGGGCTGGCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GLTLHRLGKPSNPCFYQIACRCC*GRAGRC Trigger: ACAGCGGCCAGCCCGTCCTCAGCAGCACCGGCACGC...TATCTGATAAAAGCATGGGTTAGAGGGCTTTCCTAATCTGTGTAAAGTCAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | AATTTTTCAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCGAGGTGGCTGACTaGAGGGAGCTGAGCGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: NFSVVCVCVCVCVCVCVCSEVAD*RELSEP Trigger: CGGCTCGCTCAGCTCCCTGCAGTCAGCCACCTCGGA...ACACACACACACACACACACACACACACACACACACACACACCACTGAAAAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCCGCCCCGTAGAGTTCTaGCAGTTTTCGGAAGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: WISYNANSLFSSYMRAHVRPVEF*QFSEAG Trigger: CCCCGCTTCCGAAAACTGGCAGAACTCTACGGGGCG...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | TGGCCGCGCCTCGGGCATGAGAAGCAGCCTTTGAGAACGTCTGGATTTGGGTGCGTTGTTGGTTACGTCTaGGTCCTTAGCAGAAATGAT | + |
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Preference number: 4 (lower is better) Translates to: WPRLGHEKQPLRTSGFGCVVGYV*VLSRND Trigger: ATCATTTCTGCTAAGGACCCAGACGTAACCAACAAC...GCACCCAAATCCAGACGTTCTCAAAGGCTGCTTCTCATGCCCGAGGCGCGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | AGACATCTACAGTGCACGAGGCAGCTTTTCTGCTTTCCTTCTGGCTTTTACGAACGCGCGGGTTCCACATaGCTGCGATGTCGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RHLQCTRQLFCFPSGFYERAGST*LRCRRP Trigger: AGGCCTTCGACATCGCAGCCATGTGGAACCCGCGCG...TTCGTAAAAGCCAGAAGGAAAGCAGAAAAGCTGCCTCGTGCACTGTAGATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | CTGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTAGAGAACAGTGGCTGTaGGGTCCATCAGCGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LDQLQCELSVQLLHESTRREQWL*GPSAPR Trigger: TCTGGGCGCTGATGGACCTCACAGCCACTGTTCTCT...ACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | CCTCCCCAACCATTCCCCATGCAAGGCCGGGAAAGTCTAAACCTTGTCTCAAAAACAGCACTCACTGTCTaGATCAGCTGTCCGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPQPFPMQGRESLNLVSKTALTV*ISCPAL Trigger: CAAAGCCGGACAGCTGATCCAGACAGTGAGTGCTGT...TTTTGAGACAAGGTTTAGACTTTCCCGGCCTTGCATGGGGAATGGTTGGGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCGAGCAGATAGGCCTCTaGGCTGCAGGACATGACGTG | + |
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Preference number: 4 (lower is better) Translates to: WISYNANSLFSSYMRAHVEQIGL*AAGHDV Trigger: CACGTCATGTCCTGCAGCCCAGAGGCCTATCTGCTC...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCCCGACTCAAGCTGACTaGGAGCAGATAGGCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: WISYNANSLFSSYMRAHVPTQAD*EQIGLW Trigger: CCAGAGGCCTATCTGCTCCCAGTCAGCTTGAGTCGG...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | CTGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTTCTCGGTCGAGCCTCTaGATGGCATGGATGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LDQLQCELSVQLLHESTRSRSSL*MAWMSP Trigger: TGGAGACATCCATGCCATTCAGAGGCTCGACCGAGA...ACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | CTCCACATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTTTTCTGAAACCCAGCTCCTCTTaGTTCGCTGATGTGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: LHIWHSEETSTVHEAAFLKPSSS*FADVTA Trigger: CGCAGTCACATCAGCGAAGCAAGAGGAGCTGGGTTT...CAGAAAAGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAATGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCCTTCATCCAGGTCCTTaGCAAACACTCTGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: WISYNANSLFSSYMRAHVLHPGP*QTLCPQ Trigger: CTGTGGGCAGAGTGTTTGCCAAGGACCTGGATGAAG...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | CCTCCCCAACCATTCCCCATGCAAGGCCGGGAAAGTCTAAACCTTGTCTCAAAAGAATCTGGGAAACTCTaGAGCGTTGTCATTCACATC | + |
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Preference number: 4 (lower is better) Translates to: PPQPFPMQGRESLNLVSKESGKL*SVVIHI Trigger: GATGTGAATGACAACGCTCCAGAGTTTCCCAGATTC...TTTTGAGACAAGGTTTAGACTTTCCCGGCCTTGCATGGGGAATGGTTGGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCGCCTGCTCCTTCTCCTaGAAGGATGTATTTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: WISYNANSLFSSYMRAHVACSFS*KDVFDG Trigger: TCCATCAAATACATCCTTTCAGGAGAAGGAGCAGGC...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | TACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAGCTGGGCTGCAGGACATaGCGTGGCCATCGTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: YFLFGFLLLHLISTFGTQLGCRT*RGHRHC Trigger: GCAATGACGATGGCCACGTCATGTCCTGCAGCCCAG...CTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | AATTTTTCAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGTGGCCATCGTCATTaGAGCTGCACACTTGAATGG | + |
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Preference number: 4 (lower is better) Translates to: NFSVVCVCVCVCVCVCVCRGHRH*SCTLEW Trigger: CCATTCAAGTGTGCAGCTGCAATGACGATGGCCACG...ACACACACACACACACACACACACACACACACACACACACACCACTGAAAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCAAATATGGCTGGCCCTaGAGAATGCTGTACACTACC | + |
|
Preference number: 4 (lower is better) Translates to: WISYNANSLFSSYMRAHVKYGWP*RMLYTT Trigger: GGTAGTGTACAGCATTCTCCAGGGCCAGCCATATTT...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCGCAACACTTCCCACTTaGGAGGGATTGTTCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WISYNANSLFSSYMRAHVATLPT*EGLFIS Trigger: GGAAATGAACAATCCCTCCCAAGTGGGAAGTGTTGC...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | AATTTTTCAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCCTGTCTAGGGCTTaGGCCCTTAGAGTATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFSVVCVCVCVCVCVCVCLLSRA*ALRVYW Trigger: CCAATATACTCTAAGGGCTCAAGCCCTAGACAGGAG...ACACACACACACACACACACACACACACACACACACACACACCACTGAAAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | ATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTTTTCTGCTTTCCTTTGATAATGAACTCTaGTTCTGGCTCCATTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IWHSEETSTVHEAAFLLSFDNEL*FWLHWP Trigger: CGGCCAATGGAGCCAGAATCAGAGTTCATTATCAAA...GGAAAGCAGAAAAGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | CCTCCCCAACCATTCCCCATGCAAGGCCGGGAAAGTCTAAACCTTGTCTCAAAAGCTTCTTCACAGTTATaGTGCCAACTTGGAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPQPFPMQGRESLNLVSKASSQL*CQLGSF Trigger: AAAACTTCCAAGTTGGCATCATAACTGTGAAGAAGC...TTTTGAGACAAGGTTTAGACTTTCCCGGCCTTGCATGGGGAATGGTTGGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCAGAAGTACAAGGATGTaGCAAGTCCAAGCCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: WISYNANSLFSSYMRAHVRSTRM*QVQANS Trigger: AGAGTTGGCTTGGACTTGGCACATCCTTGTACTTCT...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | TACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAGTTGCAGCTGCACACTTaGATGGTAAGCGTGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YFLFGFLLLHLISTFGTQLQLHT*MVSVPV Trigger: CACCGGCACGCTTACCATTCAAGTGTGCAGCTGCAA...CTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | AGACATCTACAGTGCACGAGGCAGCTTTTCTGCTTTCCTTCTGGCTTTTACGAATGTTGTGTCCTGAAATaGGCCAAGGTTCAGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: RHLQCTRQLFCFPSGFYECCVLK*AKVQKT Trigger: CGTTTTCTGAACCTTGGCCCATTTCAGGACACAACA...TTCGTAAAAGCCAGAAGGAAAGCAGAAAAGCTGCCTCGTGCACTGTAGATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | GGATTGACTTTACACAGATTAGGAAAGCCCTCTAACCCATGCTTTTATCAGATAGCCTCATGGACAGGATaGGCAGCACCAACACTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLTLHRLGKPSNPCFYQIASWTG*AAPTLR Trigger: TCTTAGTGTTGGTGCTGCTCATCCTGTCCATGAGGC...TATCTGATAAAAGCATGGGTTAGAGGGCTTTCCTAATCTGTGTAAAGTCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | GGATTGACTTTACACAGATTAGGAAAGCCCTCTAACCCATGCTTTTATCAGATACTTCTGGCATTGGAGTaGTGGAGAGAACAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLTLHRLGKPSNPCFYQILLALE*WREQWL Trigger: CAGCCACTGTTCTCTCCAGCACTCCAATGCCAGAAG...TATCTGATAAAAGCATGGGTTAGAGGGCTTTCCTAATCTGTGTAAAGTCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | CTGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCATCTCCATCCACAATaGTATACTTCATCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDQLQCELSVQLLHESTRHLHPQ*YTSSLH Trigger: ATGCAGAGATGAAGTATACCATTGTGGATGGAGATG...ACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | CCTCCCCAACCATTCCCCATGCAAGGCCGGGAAAGTCTAAACCTTGTCTCAAAAGTTATGATGCCAACTTaGAAGTTTTGGTCTGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: PPQPFPMQGRESLNLVSKVMMPT*KFWSVL Trigger: TAATACAGACCAAAACTTCCAAGTTGGCATCATAAC...TTTTGAGACAAGGTTTAGACTTTCCCGGCCTTGCATGGGGAATGGTTGGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | AGACATCTACAGTGCACGAGGCAGCTTTTCTGCTTTCCTTCTGGCTTTTACGAAAAGCTTCATAGAATCTaGGAAACTCTGGAGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RHLQCTRQLFCFPSGFYEKLHRI*ETLERC Trigger: ACAACGCTCCAGAGTTTCCCAGATTCTATGAAGCTT...TTCGTAAAAGCCAGAAGGAAAGCAGAAAAGCTGCCTCGTGCACTGTAGATGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | GGATTGACTTTACACAGATTAGGAAAGCCCTCTAACCCATGCTTTTATCAGATAAAACGCATCTCTAGGTaGGGATTGGATCCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GLTLHRLGKPSNPCFYQIKRISR*GLDPST Trigger: GGTGGAAGGATCCAATCCTCACCTAGAGATGCGTTT...TATCTGATAAAAGCATGGGTTAGAGGGCTTTCCTAATCTGTGTAAAGTCAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | TACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAGCCACATCCTCCACACTaGTGTGCACTGTTGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFLFGFLLLHLISTFGTQPHPPH*CALLLC Trigger: ACACAACAACAGTGCACATCAGTGTGGAGGATGTGG...CTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | CTGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTAATATCAAAAGCATCTaGACCATCTCCATCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LDQLQCELSVQLLHESTRNIKSI*TISIHN Trigger: ATTGTGGATGGAGATGGTGCAGATGCTTTTGATATT...ACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | AATTTTTCAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTATACTTCATCTCTaGATTGATTCCTTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NFSVVCVCVCVCVCVCVCGILHL*IDSFIQ Trigger: CTGGATGAAGGAATCAATGCAGAGATGAAGTATACC...ACACACACACACACACACACACACACACACACACACACACACCACTGAAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR TCA 90 bp | ATACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAACTGTTGTTGTGTCCTaGAATGGGCCAAGGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILLIWLSFVASDLHIWHSTVVVS*NGPRFR Trigger: TCTGAACCTTGGCCCATTTCAGGACACAACAACAGT...TGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR GCA 90 bp | TACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAGTCCAAGCCAACTCTTTaGATTGCTCATTCTACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: YFLFGFLLLHLISTFGTQSKPTL*IAHSTR Trigger: ACGGGTAGAATGAGCAATGCAAAGAGTTGGCTTGGA...CTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CCA 90 bp | TACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAGCTTCATAGTACTCCTTaGCTTCTCTGTCCATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YFLFGFLLLHLISTFGTQLHSTP*LLCPCS Trigger: TGAACATGGACAGAGAAGCCAAGGAGTACTATGAAG...CTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CCA 90 bp | AGCGGGACAGGCTCTCGATCTCGGGGAGCATGTCCTGGCGCGTCTTaGGGGCGGCGCCTGCCTGCGCCTCGCGCGGGTTCCACATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGTGSRSRGACPGAS*GRRLPAPRAGSTWL Trigger: CAGCCATGTGGAACCCGCGCGAGGCGCAGGCAGGCGCCGCCCCCAAGACGCGCCAGGACATGCTCCCCGAGATCGAGAGCCTGTCCCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS GCA 90 bp | CTCGATCTCGGGGAGCATGTCCTGGCGCGTCTTGGGGGCGGCGCCTaGCTGCGCCTCGCGCGGGTTCCACATGGCTGCGATGTCGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LDLGEHVLARLGGGA*LRLARVPHGCDVEG Trigger: GCCTTCGACATCGCAGCCATGTGGAACCCGCGCGAGGCGCAGGCAGGCGCCGCCCCCAAGACGCGCCAGGACATGCTCCCCGAGATCGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 90 bp | CGGCCTCGTAGAGCTTGGCCAGCACGTAGCTGTGGACCGTGCTGCTaGCCGCGCAGGTCTGAGGCACGTAGCGGGACAGGCTCTCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: RPRRAWPARSCGPCC*PRRSEARSGTGSRS Trigger: AGATCGAGAGCCTGTCCCGCTACGTGCCTCAGACCTGCGCGGTCAGCAGCACGGTCCACAGCTACGTGCTGGCCAAGCTCTACGAGGCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 90 bp | GGGCTGCAGGACATGACGTGGCCATCGTCATTGCAGCTGCACACTTaGATGGTAAGCGTGCCGGTGCTGCTGAGGACGGGCTGGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLQDMTWPSSLQLHT*MVSVPVLLRTGWPL Trigger: CAGCGGCCAGCCCGTCCTCAGCAGCACCGGCACGCTTACCATTCAAGTGTGCAGCTGCAATGACGATGGCCACGTCATGTCCTGCAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS GCA 90 bp | TCCGTGAGGAAATCAAAGCTCTGCTCTGAGTCCGAGGTGGCTGACTaGAGGGAGCTGAGCGAGCCGGCCACAGAGCCGTCCCCTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVRKSKLCSESEVAD*RELSEPATEPSPSN Trigger: GTTTGAAGGGGACGGCTCTGTGGCCGGCTCGCTCAGCTCCCTGCAGTCAGCCACCTCGGACTCAGAGCAGAGCTTTGATTTCCTCACGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CCA 90 bp | GATGAGGGCACCCCGACTCAAGCTGACTGGGAGCAGATAGGCCTCTaGGCTGCAGGACATGACGTGGCCATCGTCATTGCAGCTGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: DEGTPTQADWEQIGL*AAGHDVAIVIAAAH Trigger: GTGTGCAGCTGCAATGACGATGGCCACGTCATGTCCTGCAGCCCAGAGGCCTATCTGCTCCCAGTCAGCTTGAGTCGGGGTGCCCTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | CTCACTCCCATCCTCACTGTCCAGCACAATATTGCTCCTGGGGTGGCCGCGCCTGTATGGTTGTTCCAATaGTCACATCCTCTGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LTPILTVQHNIAPGVAAPVWLFQ*SHPLAP Trigger: AGGTGCCAGAGGATGTGACAATTGGAACAACCATAC...AGGCGCGGCCACCCCAGGAGCAATATTGTGCTGGACAGTGAGGATGGGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 90 bp | TCTGATTCTGGCTCCATTGGCCGGCCTGTTCTCCTGTCTAGGGCTTaGGCCCTTAGAGTATATTGGGCTCTTTCTTCTCGGTCGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSGSIGRPVLLSRA*ALRVYWALSSRSSL Trigger: GAGGCTCGACCGAGAAGAAAGAGCCCAATATACTCTAAGGGCTCAAGCCCTAGACAGGAGAACAGGCCGGCCAATGGAGCCAGAATCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CCA 90 bp | TGTCGGAAGCCGGACCTCCGGGTCAGAATCCGAGCAGTATTATCTTaGTTGTCCCTGACAGTGAAGTTGGGGTTGTTAGCAGCCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CRKPDLRVRIRAVLS*LSLTVKLGLLAASG Trigger: TCCTGAGGCTGCTAACAACCCCAACTTCACTGTCAGGGACAACCAAGATAATACTGCTCGGATTCTGACCCGGAGGTCCGGCTTCCGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 90 bp | CTAATTCAACTTCTGGCATTGGAGTGCTGGAGAGAACAGTGGCTGTaGGGTCCATCAGCGCCCAGAAGTACAAGGATGTGCCAAGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LIQLLALECWREQWL*GPSAPRSTRMCQVQ Trigger: TTGGACTTGGCACATCCTTGTACTTCTGGGCGCTGATGGACCTCACAGCCACTGTTCTCTCCAGCACTCCAATGCCAGAAGTTGAATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCTCTGAGAGAGTGATGTaGACTGTTGTGGTCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WISYNANSLFSSYMRAHVSERVM*TVVVPA Trigger: GGCTGGGACCACAACAGTCAACATCACTCTCTCAGA...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | CTGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTGTCCAAGCCAACTCTTaGCATTGCTCATTCTACCCG | + |
|
Preference number: 5 (lower is better) Translates to: LDQLQCELSVQLLHESTRVQANS*HCSFYP Trigger: CGGGTAGAATGAGCAATGCAAAGAGTTGGCTTGGAC...ACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | ATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTTTTCTGCTTTCCCGGGGTGGGTTATCATaGACATCTGAGAGAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: IWHSEETSTVHEAAFLLSRGGLS*TSERVM Trigger: CATCACTCTCTCAGATGTCAATGATAACCCACCCCG...GGAAAGCAGAAAAGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | TCTGATCTCCACATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTAGCAACACTTCCCACTaGGGAGGGATTGTTCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDLHIWHSEETSTVHEAASNTSH*GGIVHF Trigger: GAAATGAACAATCCCTCCCAAGTGGGAAGTGTTGCT...AGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAATGTGGAGATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | CTCCACATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTTTTCTGATTGTGAGGGTCATCTaGATCCACAGCACTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHIWHSEETSTVHEAAFLIVRVI*IHSTHC Trigger: ACAGTGAGTGCTGTGGATCAAGATGACCCTCACAAT...CAGAAAAGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAATGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | TGGATCAGCTACAATGCGAACTCTCTGTTCAGCTCTTACATGAGAGCACACGTCGTCGATGATGTAGGGTaGTTTGCGATGTCGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WISYNANSLFSSYMRAHVVDDVG*FAMSPH Trigger: ATGAGGCGACATCGCAAACAACCCTACATCATCGAC...GACGTGTGCTCTCATGTAAGAGCTGAACAGAGAGTTCGCATTGTAGCTGATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | TCTGATCTCCACATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTTACCTGATTGAGTTGTaGGTTACGTCTGGGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SDLHIWHSEETSTVHEAAYLIEL*VTSGSL Trigger: TAAGGACCCAGACGTAACCAACAACTCAATCAGGTA...AGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAATGTGGAGATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | AATTTTTCAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTCCATCCAGGAACTaGGGCTCGTTGTCATTGATA | + |
|
Preference number: 5 (lower is better) Translates to: NFSVVCVCVCVCVCVCVCGPSRN*GSLSLI Trigger: TATCAATGACAACGAGCCCAAGTTCCTGGATGGACC...ACACACACACACACACACACACACACACACACACACACACACCACTGAAAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | AATTTTTCAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTACCTGATTGAGTaGTTGGTTACGTCTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NFSVVCVCVCVCVCVCVCEYLIE*LVTSGS Trigger: GGACCCAGACGTAACCAACAACTCAATCAGGTACTC...ACACACACACACACACACACACACACACACACACACACACACCACTGAAAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | ATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTTTTCTGCTTTCCGCAGTATTATCTTGGTaGTCCCTGACAGTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IWHSEETSTVHEAAFLLSAVLSW*SLTVKL Trigger: CAACTTCACTGTCAGGGACAACCAAGATAATACTGC...GGAAAGCAGAAAAGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTTTTCTGCTTTCCATCAGCTGTCCGGCTTaGGCATTTTCACAGATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IWHSEETSTVHEAAFLLSISCPA*AFSQIK Trigger: TTTTATCTGTGAAAATGCCAAAGCCGGACAGCTGAT...GGAAAGCAGAAAAGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
||
| CDS-3UTR CAA 90 bp | CTACAGTATGTAAACATCCCTTGGATTGACTTTACACAGATTAGGAAAGCCCTCTCCCTGACAGTGAAGTaGGGGTTGTTAGCAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQYVNIPWIDFTQIRKALSLTVK*GLLAAS Trigger: TGAGGCTGCTAACAACCCCAACTTCACTGTCAGGGA...GAGGGCTTTCCTAATCTGTGTAAAGTCAATCCAAGGGATGTTTACATACTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
||
| CDS-3UTR CAA 90 bp | TCTGATCTCCACATTTGGCACTCAGAAGAGACATCTACAGTGCACGAGGCAGCTAGTTATGATGCCAACTaGGAAGTTTTGGTCTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SDLHIWHSEETSTVHEAASYDAN*EVLVCI Trigger: AATACAGACCAAAACTTCCAAGTTGGCATCATAACT...AGCTGCCTCGTGCACTGTAGATGTCTCTTCTGAGTGCCAAATGTGGAGATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
||
| CDS-3UTR CAA 90 bp | TACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAGATTGCAGCTGCACACTaGAATGGTAAGCGTGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: YFLFGFLLLHLISTFGTQIAAAH*NGKRAG Trigger: ACCGGCACGCTTACCATTCAAGTGTGCAGCTGCAAT...CTGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
||
| CDS GCA 90 bp | ACTTGGGAGGGATTGTTCATTTCCATAGCAAGGACAGTTATATTATaGCAGGAGAACTCTTCTCTGTCTAGTGGTCTTGCAGTCATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TWEGLFISIARTVIL*QENSSLSSGLAVIR Trigger: TCTAATGACTGCAAGACCACTAGACAGAGAAGAGTTCTCCTGGCATAATATAACTGTCCTTGCTATGGAAATGAACAATCCCTCCCAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
||
| CDS-3UTR CAA 90 bp | CTACAGTATGTAAACATCCCTTGGATTGACTTTACACAGATTAGGAAAGCCCTCTACTTCATCTCTGCATaGATTCCTTCATCCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LQYVNIPWIDFTQIRKALYFISA*IPSSRS Trigger: GGACCTGGATGAAGGAATCAATGCAGAGATGAAGTA...GAGGGCTTTCCTAATCTGTGTAAAGTCAATCCAAGGGATGTTTACATACTGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | ATACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCACCCACTTGGGAGGGATaGTTCATTTCCATAGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: ILLIWLSFVASDLHIWHSPTWEG*FISIAR Trigger: CCTTGCTATGGAAATGAACAATCCCTCCCAAGTGGG...TGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | ATACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCAAGCCAACTCTTTGCATaGCTCATTCTACCCGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: ILLIWLSFVASDLHIWHSSQLFA*LILPVV Trigger: GACTACGGGTAGAATGAGCAATGCAAAGAGTTGGCT...TGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | GGATTGACTTTACACAGATTAGGAAAGCCCTCTAACCCATGCTTTTATCAGATACCTGAAAGGATGTATTaGATGGATCCATCTCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GLTLHRLGKPSNPCFYQIPERMY*MDPSPL Trigger: CAGAGGAGATGGATCCATCAAATACATCCTTTCAGG...TATCTGATAAAAGCATGGGTTAGAGGGCTTTCCTAATCTGTGTAAAGTCAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | AATTTTTCAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGATTACACCTGTTTaGGAGTCCACAGAAAAATAT | + |
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Preference number: 5 (lower is better) Translates to: NFSVVCVCVCVCVCVCVCLITPV*ESTEKY Trigger: ATATTTTTCTGTGGACTCCAAAACAGGTGTAATCAG...ACACACACACACACACACACACACACACACACACACACACACCACTGAAAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | GGATTGACTTTACACAGATTAGGAAAGCCCTCTAACCCATGCTTTTATCAGATAACTGTAGTAGAAATGTaGGCCATTGTGAGGGTCATC | + |
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Preference number: 5 (lower is better) Translates to: GLTLHRLGKPSNPCFYQITVVEM*AIVRVI Trigger: GATGACCCTCACAATGGCCAACATTTCTACTACAGT...TATCTGATAAAAGCATGGGTTAGAGGGCTTTCCTAATCTGTGTAAAGTCAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | CTACAGTATGTAAACATCCCTTGGATTGACTTTACACAGATTAGGAAAGCCCTCTCCCATATCTTTGGCTaGGATAATCACTTCATAGTA | + |
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Preference number: 5 (lower is better) Translates to: LQYVNIPWIDFTQIRKALSHIFG*DNHFIV Trigger: TACTATGAAGTGATTATCCAAGCCAAAGATATGGGA...GAGGGCTTTCCTAATCTGTGTAAAGTCAATCCAAGGGATGTTTACATACTGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS-3UTR CAA 90 bp | ATACTTCTTATTTGGCTTTCTTTTGTTGCATCTGATCTCCACATTTGGCACTCATTCACATCGAGGACTTaGATTGTGACAGCAACACTT | + |
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Preference number: 5 (lower is better) Translates to: ILLIWLSFVASDLHIWHSFTSRT*IVTATL Trigger: AAGTGTTGCTGTCACAATCAAAGTCCTCGATGTGAA...TGAGTGCCAAATGTGGAGATCAGATGCAACAAAAGAAAGCCAAATAAGAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CCA 72 bp | GGCTCTCGATCTCGGGGAGCATGTCCTGGCGCGTCTTaGGGGCGGCGCCTGCCTGCGCCTCGCGCGGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GSRSRGACPGAS*GRRLPAPRAGS Trigger: GGAACCCGCGCGAGGCGCAGGCAGGCGCCGCCCCCAAGACGCGCCAGGACATGCTCCCCGAGATCGAGAGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS GCA 72 bp | GGGGAGCATGTCCTGGCGCGTCTTGGGGGCGGCGCCTaGCTGCGCCTCGCGCGGGTTCCACATGGCTGCGAT | + |
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Preference number: 6 (lower is better) Translates to: GEHVLARLGGGA*LRLARVPHGCD Trigger: ATCGCAGCCATGTGGAACCCGCGCGAGGCGCAGGCAGGCGCCGCCCCCAAGACGCGCCAGGACATGCTCCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 72 bp | AGGCTCTCGATCTCGGGGAGCATGTCCTGGCGCGTCTaGGGGGCGGCGCCTGCCTGCGCCTCGCGCGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: RLSISGSMSWRV*GAAPACASRGF Trigger: GAACCCGCGCGAGGCGCAGGCAGGCGCCGCCCCCAAGACGCGCCAGGACATGCTCCCCGAGATCGAGAGCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS GCA 72 bp | AGCATGTCCTGGCGCGTCTTGGGGGCGGCGCCTGCCTaGGCCTCGCGCGGGTTCCACATGGCTGCGATGTCG | + |
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Preference number: 6 (lower is better) Translates to: SMSWRVLGAAPA*ASRGFHMAAMS Trigger: CGACATCGCAGCCATGTGGAACCCGCGCGAGGCGCAGGCAGGCGCCGCCCCCAAGACGCGCCAGGACATGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 72 bp | AGAGCTTGGCCAGCACGTAGCTGTGGACCGTGCTGCTaGCCGCGCAGGTCTGAGGCACGTAGCGGGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: RAWPARSCGPCC*PRRSEARSGTG Trigger: GCCTGTCCCGCTACGTGCCTCAGACCTGCGCGGTCAGCAGCACGGTCCACAGCTACGTGCTGGCCAAGCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 90 bp | TGGGCTGCAGGACATGACGTGGCCATCGTCATTGCAGCTGCACACTaGAATGGTAAGCGTGCCGGTGCTGCTGAGGACGGGCTGGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: WAAGHDVAIVIAAAH*NGKRAGAAEDGLAA Trigger: AGCGGCCAGCCCGTCCTCAGCAGCACCGGCACGCTTACCATTCAAGTGTGCAGCTGCAATGACGATGGCCACGTCATGTCCTGCAGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 72 bp | GACATGACGTGGCCATCGTCATTGCAGCTGCACACTTaGATGGTAAGCGTGCCGGTGCTGCTGAGGACGGGC | + |
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Preference number: 6 (lower is better) Translates to: DMTWPSSLQLHT*MVSVPVLLRTG Trigger: GCCCGTCCTCAGCAGCACCGGCACGCTTACCATTCAAGTGTGCAGCTGCAATGACGATGGCCACGTCATGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CCA 72 bp | ACCCCGACTCAAGCTGACTGGGAGCAGATAGGCCTCTaGGCTGCAGGACATGACGTGGCCATCGTCATTGCA | + |
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Preference number: 6 (lower is better) Translates to: TPTQADWEQIGL*AAGHDVAIVIA Trigger: TGCAATGACGATGGCCACGTCATGTCCTGCAGCCCAGAGGCCTATCTGCTCCCAGTCAGCTTGAGTCGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 72 bp | GGACATGACGTGGCCATCGTCATTGCAGCTGCACACTaGAATGGTAAGCGTGCCGGTGCTGCTGAGGACGGG | + |
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Preference number: 6 (lower is better) Translates to: GHDVAIVIAAAH*NGKRAGAAEDG Trigger: CCCGTCCTCAGCAGCACCGGCACGCTTACCATTCAAGTGTGCAGCTGCAATGACGATGGCCACGTCATGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 90 bp | CGGAAGCCGGACCTCCGGGTCAGAATCCGAGCAGTATTATCTTGGTaGTCCCTGACAGTGAAGTTGGGGTTGTTAGCAGCCTCAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RKPDLRVRIRAVLSW*SLTVKLGLLAASGA Trigger: GGCTCCTGAGGCTGCTAACAACCCCAACTTCACTGTCAGGGACAACCAAGATAATACTGCTCGGATTCTGACCCGGAGGTCCGGCTTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 90 bp | CTGTCGGAAGCCGGACCTCCGGGTCAGAATCCGAGCAGTATTATCTaGGTTGTCCCTGACAGTGAAGTTGGGGTTGTTAGCAGCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSEAGPPGQNPSSII*VVPDSEVGVVSSLR Trigger: CCTGAGGCTGCTAACAACCCCAACTTCACTGTCAGGGACAACCAAGATAATACTGCTCGGATTCTGACCCGGAGGTCCGGCTTCCGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 72 bp | CTTCTGGCATTGGAGTGCTGGAGAGAACAGTGGCTGTaGGGTCCATCAGCGCCCAGAAGTACAAGGATGTGC | + |
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Preference number: 6 (lower is better) Translates to: LLALECWREQWL*GPSAPRSTRMC Trigger: GCACATCCTTGTACTTCTGGGCGCTGATGGACCTCACAGCCACTGTTCTCTCCAGCACTCCAATGCCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 72 bp | GGCTCCATTGGCCGGCCTGTTCTCCTGTCTAGGGCTTaGGCCCTTAGAGTATATTGGGCTCTTTCTTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: GSIGRPVLLSRA*ALRVYWALSSR Trigger: CCGAGAAGAAAGAGCCCAATATACTCTAAGGGCTCAAGCCCTAGACAGGAGAACAGGCCGGCCAATGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 72 bp | GCCGGACCTCCGGGTCAGAATCCGAGCAGTATTATCTaGGTTGTCCCTGACAGTGAAGTTGGGGTTGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: AGPPGQNPSSII*VVPDSEVGVVS Trigger: GCTAACAACCCCAACTTCACTGTCAGGGACAACCAAGATAATACTGCTCGGATTCTGACCCGGAGGTCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CCA 72 bp | CCGGACCTCCGGGTCAGAATCCGAGCAGTATTATCTTaGTTGTCCCTGACAGTGAAGTTGGGGTTGTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: PDLRVRIRAVLS*LSLTVKLGLLA Trigger: TGCTAACAACCCCAACTTCACTGTCAGGGACAACCAAGATAATACTGCTCGGATTCTGACCCGGAGGTCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 72 bp | GACCTCCGGGTCAGAATCCGAGCAGTATTATCTTGGTaGTCCCTGACAGTGAAGTTGGGGTTGTTAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: DLRVRIRAVLSW*SLTVKLGLLAA Trigger: GGCTGCTAACAACCCCAACTTCACTGTCAGGGACAACCAAGATAATACTGCTCGGATTCTGACCCGGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 90 bp | CACAATGTTCTCGTGGATGTTCTCATCGTCGTCGATGATGTAGGGTaGTTTGCGATGTCGCCTCATGGACAGGATGAGCAGCACCAACAC | + |
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Preference number: 6 (lower is better) Translates to: HNVLVDVLIVVDDVG*FAMSPHGQDEQHQH Trigger: GTGTTGGTGCTGCTCATCCTGTCCATGAGGCGACATCGCAAACAACCCTACATCATCGACGACGATGAGAACATCCACGAGAACATTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 72 bp | TGTAGGGTTGTTTGCGATGTCGCCTCATGGACAGGATaGGCAGCACCAACACTAAGAGGACAAAGATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CRVVCDVASWTG*AAPTLRGQRCR Trigger: CCTGCATCTTTGTCCTCTTAGTGTTGGTGCTGCTCATCCTGTCCATGAGGCGACATCGCAAACAACCCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 72 bp | GCACAATGTTCTCGTGGATGTTCTCATCGTCGTCGATaGTGTAGGGTTGTTTGCGATGTCGCCTCATGGACA | + |
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Preference number: 6 (lower is better) Translates to: AQCSRGCSHRRR*CRVVCDVASWT Trigger: TGTCCATGAGGCGACATCGCAAACAACCCTACATCATCGACGACGATGAGAACATCCACGAGAACATTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CCA 72 bp | GGCCAAGGTTCAGAAAACGCATCTCTAGGTGAGGATTaGATCCTTCCACCTTCAGGGTGTAGCTTTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: GQGSENASLGED*ILPPSGCSFSC Trigger: GCAAGAAAAGCTACACCCTGAAGGTGGAAGGATCCAATCCTCACCTAGAGATGCGTTTTCTGAACCTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 72 bp | AGAGTATATTGGGCTCTTTCTTCTCGGTCGAGCCTCTaGATGGCATGGATGTCTCCAGTGGTGTCATCAATG | + |
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Preference number: 6 (lower is better) Translates to: RVYWALSSRSSL*MAWMSPVVSSM Trigger: CATTGATGACACCACTGGAGACATCCATGCCATTCAGAGGCTCGACCGAGAAGAAAGAGCCCAATATACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS TCA 72 bp | ACATCCTCCACACTGATGTGCACTGTTGTTGTGTCCTaGAATGGGCCAAGGTTCAGAAAACGCATCTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: TSSTLMCTVVVS*NGPRFRKRISR Trigger: CCTAGAGATGCGTTTTCTGAACCTTGGCCCATTTCAGGACACAACAACAGTGCACATCAGTGTGGAGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 72 bp | TCGCTGCCTCTGTCAATGGAGTACCTGATTGAGTTGTaGGTTACGTCTGGGTCCTTAGCAGAAATGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: SLPLSMEYLIEL*VTSGSLAEMIC Trigger: ACAGATCATTTCTGCTAAGGACCCAGACGTAACCAACAACTCAATCAGGTACTCCATTGACAGAGGCAGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CCA 72 bp | TCGAGGACTTTGATTGTGACAGCAACACTTCCCACTTaGGAGGGATTGTTCATTTCCATAGCAAGGACAGTT | + |
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Preference number: 6 (lower is better) Translates to: SRTLIVTATLPT*EGLFISIARTV Trigger: AACTGTCCTTGCTATGGAAATGAACAATCCCTCCCAAGTGGGAAGTGTTGCTGTCACAATCAAAGTCCTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 72 bp | CCATCTCCATCCACAATGGTATACTTCATCTCTGCATaGATTCCTTCATCCAGGTCCTTGGCAAACACTCTG | + |
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Preference number: 6 (lower is better) Translates to: PSPSTMVYFISA*IPSSRSLANTL Trigger: CAGAGTGTTTGCCAAGGACCTGGATGAAGGAATCAATGCAGAGATGAAGTATACCATTGTGGATGGAGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 90 bp | ACAATGGTATACTTCATCTCTGCATTGATTCCTTCATCCAGGTCCTaGGCAAACACTCTGCCCACAGTAGAGCTAATTGGAGCAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: TMVYFISALIPSSRS*ANTLPTVELIGADS Trigger: AGAATCTGCTCCAATTAGCTCTACTGTGGGCAGAGTGTTTGCCAAGGACCTGGATGAAGGAATCAATGCAGAGATGAAGTATACCATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS GCA 72 bp | GGATTGTTCATTTCCATAGCAAGGACAGTTATATTATaGCAGGAGAACTCTTCTCTGTCTAGTGGTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: GLFISIARTVIL*QENSSLSSGLA Trigger: TGCAAGACCACTAGACAGAGAAGAGTTCTCCTGGCATAATATAACTGTCCTTGCTATGGAAATGAACAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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| CDS CAA 72 bp | GGGCTTCTTCACAGTTATGATGCCAACTTGGAAGTTTaGGTCTGTATTAATATCAAAAGCATCTGCACCATC | + |
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Preference number: 6 (lower is better) Translates to: GLLHSYDANLEV*VCINIKSICTI Trigger: GATGGTGCAGATGCTTTTGATATTAATACAGACCAAAACTTCCAAGTTGGCATCATAACTGTGAAGAAGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062528.9 |
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