Pregenerated sensors for CDH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024304Ensembl transcript IDs: ENSMUST00000025166.14, ENSMUST00000115850.2
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCCAGACAGTATTGGATCACTGATATTCCCTGGGAGCCCAAACTaGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGT | + |
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Preference number: 1 (lower is better) Translates to: FPDSIGSLIFPGSPN*FAAYAKASSKHGAS Trigger: ACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTTTGGGCTCCCAGGGAATATCAGTGATCCAATACTGTCTGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| 3UTR CCA 90 bp | CTGAGCTCGGTGTTTTCCAGACAGTATTGGATCACTGATATTCCCTaGGAGCCCAAACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: LSSVFSRQYWITDIP*EPKLVRSLRQSLQQ Trigger: TTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTTTGGGCTCCCAGGGAATATCAGTGATCCAATACTGTCTGGAAAACACCGAGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| 3UTR CCA 90 bp | CTTTTTATTCAGAACGCTGGGGTCAGAGGTGTATTGTTTGTATTCTaGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: LFIQNAGVRGVLFVF*YTTQTQSCFRSLSS Trigger: ACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAGCGTTCTGAATAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| 3UTR-3UTR TCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATTTGGGAATATCAGGTaGAACTGTTCATACTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: NWFAAYAKASSKHGASGLFGNIR*NCSYLS Trigger: GGACAAGTATGAACAGTTTCACCTGATATTCCCAAA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGTTTTTTGGGAATATCAGGTaGAACTGTTCATACTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: GQRCIVCILVHNTDAKLFFGNIR*NCSYLS Trigger: GGACAAGTATGAACAGTTTCACCTGATATTCCCAAA...AAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| 3UTR-3UTR CCA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTTTTTCCAGACAGTATTaGATCACTGATATTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: CILVHNTDAKLFQKSLQFFSRQY*ITDIPW Trigger: CCAGGGAATATCAGTGATCCAATACTGTCTGGAAAA...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| 3UTR-3UTR TCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGAAATTCAAGTGTAGCTaGGCTCGGTGTTTTCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: FQSEKGTKRHINPSASLLKFKCS*ARCFPD Trigger: GTCTGGAAAACACCGAGCTCAGCTACACTTGAATTT...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGTTTTCCAGACAGTATTaGATCACTGATATTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: FQSEKGTKRHINPSASLLFSRQY*ITDIPW Trigger: CCAGGGAATATCAGTGATCCAATACTGTCTGGAAAA...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| 3UTR CCA 72 bp | CAGAACGCTGGGGTCAGAGGTGTATTGTTTGTATTCTaGTACACAACACAGACGCAAAGCTGTTTCAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: QNAGVRGVLFVF*YTTQTQSCFRS Trigger: ACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAGCGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| 3UTR TCA 72 bp | CTTAACAAAAGCAAATGCATTGTAACAAAAGTGGGTTaGAGCGTATCACATTTAACTTTCTGCTCCCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LNKSKCIVTKVG*SVSHLTFCSRH Trigger: GTGGCGGGAGCAGAAAGTTAAATGTGATACGCTTCAACCCACTTTTGTTACAATGCATTTGCTTTTGTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| 3UTR-3UTR CAA 90 bp | TACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAAAAGCTTTTACTACAGCTCAACAGTaGAATCAAATGTCACTTTGT | + |
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Preference number: 3 (lower is better) Translates to: YTTQTQSCFRSLSSLKAFTTAQQ*NQMSLC Trigger: ACAAAGTGACATTTGATTCAACTGTTGAGCTGTAGT...AAAAGCTTTTAAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAGGTGTGCTGGGCGCCTaGGACAGGATCCTGTACCGC | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRGVLGA*DRILYR Trigger: GCGGTACAGGATCCTGTCCCAGGCGCCCAGCACACC...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR TCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGACGGGGTCCTGAGCAGTaGGCGTGGTCAGCATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRRGPEQ*AWSAWY Trigger: GTACCATGCTGACCACGCTCACTGCTCAGGACCCCG...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTAGGTGTGCTGGGCGCCTaGGACAGGATCCTGTACCGC | + |
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Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLGVLGA*DRILYR Trigger: GCGGTACAGGATCCTGTCCCAGGCGCCCAGCACACC...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATGGGTGAAGGTGTGCTaGGCGCCTGGGACAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRWVKVC*APGTGS Trigger: GGATCCTGTCCCAGGCGCCCAGCACACCTTCACCCA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR TCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACGGGGTCCTGAGCAGTaGGCGTGGTCAGCATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLRGPEQ*AWSAWY Trigger: GTACCATGCTGACCACGCTCACTGCTCAGGACCCCG...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTAATGCCCGTTGGAGGCTaGTCAGCTCCTGGCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLMPVGG*SAPGPV Trigger: CACTGGGCCAGGAGCTGACCAGCCTCCAACGGGCAT...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATGGGTGAAGGTGTGCTaGGCGCCTGGGACAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLWVKVC*APGTGS Trigger: GGATCCTGTCCCAGGCGCCCAGCACACCTTCACCCA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAAGGCTGGTCAGCTCCTaGCCCAGTGACGCTGTATCT | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRRLVSS*PSDAVS Trigger: AGATACAGCGTCACTGGGCCAGGAGCTGACCAGCCT...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACATACGGTGGCGCCGTaGGGTCGTTGTCAGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLHTVAP*GRCQQL Trigger: AAGCTGCTGACAACGACCCCACGGCGCCACCGTATG...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR TCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATTGCCTGCTCTGCAGTaGGAGGGAAGCTTCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRLPALQ*EGSFSQ Trigger: CTGTGAGAAGCTTCCCTCTCACTGCAGAGCAGGCAA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATCGATCCAGACCAGCTaGCACAGTGATGATGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRSIQTS*HSDDVP Trigger: GGGGACATCATCACTGTGGCAGCTGGTCTGGATCGA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGCCGTGGAGCCGCTaGCCTCGTAGTCAAAGACTA | + |
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Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLQPWSR*PRSQRL Trigger: TAGTCTTTGACTACGAGGGCAGCGGCTCCACGGCTG...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATCGGACTGGGTACTGTaGCTCAGCATGGATAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRSDWVL*LSMDRP Trigger: AGGCCTATCCATGCTGAGCCACAGTACCCAGTCCGA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAGCCCATCATTGCTGTTaGGGTCTGTCAGGATGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRAHHCC*GLSGWQ Trigger: TTGCCATCCTGACAGACCCCAACAGCAATGATGGGC...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAAGGCTCCACAGTATCTaGTTGCTGGAGCTGGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRRLHSI*LLELAQ Trigger: TTGAGCCAGCTCCAGCAACCAGATACTGTGGAGCCT...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATCGGACTGGGTACTGTaGCTCAGCATGGATAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLSDWVL*LSMDRP Trigger: AGGCCTATCCATGCTGAGCCACAGTACCCAGTCCGA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR TCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAATTCTGACAAGCTCTTaGGGAAAGGGTCCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRILTSS*GKGPLE Trigger: CTCCAGAGGACCCTTTCCTCAAGAGCTTGTCAGAAT...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR TCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTAGATCCAGAGGCTTTGTaGCTGACAGCTGTCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLDPEAL*LTAVLR Trigger: TCTCAGGACAGCTGTCAGTCACAAAGCCTCTGGATC...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR TCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGACCATTGGAGTCACACTaGCAAACTTTCACACGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRPLESH*QTFTRR Trigger: CCTGCGTGTGAAAGTTTGTCAGTGTGACTCCAATGG...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAATCAGGAACTTTGCCTaGTCTGCAGTGAGAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRIRNFA*SAVRGK Trigger: CTTCCCTCTCACTGCAGAGCAGGCAAAGTTCCTGAT...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAACCCAGTCTCTCTTCTaGCTTTGTAGAGCTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRTQSLF*LCRAPL Trigger: CAGTGGAGCTCTACAAAGGCAGAAGAGAGACTGGGT...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAGGCCATAAGTGGGATTaGCTTCCATGTCTGTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRGHKWD*LPCLWL Trigger: AAGCCACAGACATGGAAGGCAATCCCACTTATGGCC...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATCCACAGTATCTGGTTaGTGGAGCTGGCTCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRSTVSG*WSWLKS Trigger: TGACTTGAGCCAGCTCCAGCAACCAGATACTGTGGA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAGACCCATTCCAAACCTaGTGCAGAAACTCAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRDPFQT*CRNSGL Trigger: CAGACCTGAGTTTCTGCACCAGGTTTGGAATGGGTC...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGACTTTCACACGCAGGATaGAAATGTTGGACTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRLSHAG*KCWTWG Trigger: CCCCCAAGTCCAACATTTCCATCCTGCGTGTGAAAG...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTAAAAAGCTGCTTGGCTTaGCGCTCTTTATCCCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLKSCLA*RSLSRR Trigger: ACGGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTT...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR TCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACCACTTGATTGCCATTaGTGTCCACTGCATGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLPLDCH*CPLHVL Trigger: GAGCACATGCAGTGGACATCAATGGCAATCAAGTGG...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | CTGGGGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTCCCAGGGTGTGGGGCTaGGGATCGGACTGGGTACTG | + |
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Preference number: 4 (lower is better) Translates to: LGSEVYCLYSGTQHRRKAPRVWG*GSDWVL Trigger: CAGTACCCAGTCCGATCCGCAGCCCCACACCCTGGG...AGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| CDS-3UTR TCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATTGGTTTTACCACTGTaGCTAGCCCATCATTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRLVLPL*LAHHCC Trigger: ACAGCAATGATGGGCTAGTCACAGTGGTAAAACCAA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAAATCTGCTGGCTCGCTaGTTTCATACTGAACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRNLLAR*FHTELS Trigger: GGAAAGTTCAGTATGAAAGCAGCGAGCCAGCAGATT...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAATATATCAGGAACTTTaGCTGCTCTGCAGTGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRIYQEL*LLCSER Trigger: CCTCTCACTGCAGAGCAGGCAAAGTTCCTGATATAT...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGACCATTCCAAACCTGGTaGAGAAACTCAGGTCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRPFQTW*RNSGLL Trigger: TAACAGACCTGAGTTTCTGCACCAGGTTTGGAATGG...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR GCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAGGGTCAATTAAAAGCTaGTTGGCTTGGCGCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRGSIKS*LAWRSL Trigger: TAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGACCC...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATCCATTCAGGGCATTTaGATCATCCGCATCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLSIQGI*IIRING Trigger: GCCATTGATGCGGATGATCCAAATGCCCTGAATGGA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATTGAAAGGCCATAAGTaGGATTGCCTTCCATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRLKGHK*DCLPCL Trigger: CAGACATGGAAGGCAATCCCACTTATGGCCTTTCAA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACCGTGCAGTCTCCATTaGAGTCACACTGACAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLPCSLH*SHTDKL Trigger: AAGTTTGTCAGTGTGACTCCAATGGAGACTGCACGG...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR TCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATTGGTTTTACCACTGTaGCTAGCCCATCATTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLLVLPL*LAHHCC Trigger: ACAGCAATGATGGGCTAGTCACAGTGGTAAAACCAA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR TCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATCCATACCACAAACATaGGAACAAGGATCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLSIPQT*EQGSAG Trigger: TCCTGCTGATCCTTGTTCTCATGTTTGTGGTATGGA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATGGCACTTGGTTTTCTaGAGCAACAGTAAGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRWHLVF*SNSKDK Trigger: TTTGTCCTTACTGTTGCTGCAGAAAACCAAGTGCCA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATTCTTCAATTTCATGTaGTTCCTTCATAGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRFFNFM*FLHRLL Trigger: GAGGAGCCTATGAAGGAACCACATGAAATTGAAGAA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATTAGCTAATGGCACTTaGTTTTCTGCAGCAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRLANGT*FSAATV Trigger: TACTGTTGCTGCAGAAAACCAAGTGCCATTAGCTAA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTTGTAAACATGTTGGGTaGAGGTGTGCTGGGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSEVYCLYSGTQHRRKACKHVG*RCAGRL Trigger: CAGGCGCCCAGCACACCTTCACCCAACATGTTTACA...AGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATATCTGATATTCTGTTaGATATATCGATCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLYLIFC*IYRSGS Trigger: GGACCCCGATCGATATATGCAACAGAATATCAGATA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATGGGTTTCTTTGTCTTaGGCATATATCAGGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSQPTPKPPASTVLVDYRWVSLS*AYIRNF Trigger: AAAGTTCCTGATATATGCCCAAGACAAAGAAACCCA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACTATTTTCAGCCAGTTaGCAGGATCAGACAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLLFSAS*QDQTIL Trigger: CAAAATTGTCTGATCCTGCCAACTGGCTGAAAATAG...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGCTCCTGGCCCAGTaGCGCTGTATCTCAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQRCIVCILVHNTDAKLFQLLAQ*RCISGK Trigger: TTTCCCTGAGATACAGCGTCACTGGGCCAGGAGCTG...AAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR TCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATCCATGTCTGTGGCTTaGATTATTAACGTATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLSMSVA*IINVYC Trigger: ACAGTATACGTTAATAATTCAAGCCACAGACATGGA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGTTTTGTCCGCCAGTTTCTTaGAGCGGGGTCCCCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQRCIVCILVHNTDAKLFCPPVS*SGVPSH Trigger: ATGACTGGGGACCCCGCTTCAAGAAACTGGCGGACA...AAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | CTGGGGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGATGTCCACTGCATGTaGTCTCAAGTGAAACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSEVYCLYSGTQHRRKADVHCM*SQVKPG Trigger: GCCCGGTTTCACTTGAGAGCACATGCAGTGGACATC...AGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTAATTAACGTATACTGTTaGACTTTCTCTCGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NWFAAYAKASSKHGASGLINVYC*TFSRSR Trigger: TCTGGATCGAGAGAAAGTGCAACAGTATACGTTAAT...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGCCCAGGGTGTGGGGCTaGGGATCGGACTGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLPRVWG*GSDWVL Trigger: CAGTACCCAGTCCGATCCGCAGCCCCACACCCTGGG...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAGGCTGGTCAGCTCCTaGCCCAGTGACGCTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: CILVHNTDAKLFQKSLQFRLVSS*PSDAVS Trigger: AGATACAGCGTCACTGGGCCAGGAGCTGACCAGCCT...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | CTGGGGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGAACTTTGCCTGCTCTaGAGTGAGAGGGAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSEVYCLYSGTQHRRKAELCLL*SEREAS Trigger: AGAAGCTTCCCTCTCACTGCAGAGCAGGCAAAGTTC...AGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | CTGGGGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTACCCAGTCTCTCTTCTaGCTTTGTAGAGCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSEVYCLYSGTQHRRKATQSLF*LCRAPL Trigger: CAGTGGAGCTCTACAAAGGCAGAAGAGAGACTGGGT...AGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTTCGATCCAGACCAGCTaGCACAGTGATGATGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CILVHNTDAKLFQKSLQFSIQTS*HSDDVP Trigger: GGGGACATCATCACTGTGGCAGCTGGTCTGGATCGA...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGATGCCCGTTGGAGGCTaGTCAGCTCCTGGCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLMPVGG*SAPGPV Trigger: CACTGGGCCAGGAGCTGACCAGCCTCCAACGGGCAT...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR GCA 90 bp | TACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAAAAGCTTTTCAGCCGTGGAGCCGCTaGCCTCGTAGTCAAAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTQSCFRSLSSLKAFQPWSR*PRSQRL Trigger: TAGTCTTTGACTACGAGGGCAGCGGCTCCACGGCTG...AAAAGCTTTTAAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CCA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAAAAGCTGCTTGGCTTaGCGCTCTTTATCCCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CILVHNTDAKLFQKSLQFKSCLA*RSLSRR Trigger: ACGGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTT...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CCA 90 bp | GGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGTTTAGGCTCCACAGTATCTaGTTGCTGGAGCTGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GQRCIVCILVHNTDAKLFRLHSI*LLELAQ Trigger: TTGAGCCAGCTCCAGCAACCAGATACTGTGGAGCCT...AAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGCATACGGTGGCGCCGTaGGGTCGTTGTCAGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLHTVAP*GRCQQL Trigger: AAGCTGCTGACAACGACCCCACGGCGCCACCGTATG...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCCATTGGAGTCACACTaGCAAACTTTCACACGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQRCIVCILVHNTDAKLFPLESH*QTFTRR Trigger: CCTGCGTGTGAAAGTTTGTCAGTGTGACTCCAATGG...AAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR TCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGTGTCCGCCAGTTTCTTaGAGCGGGGTCCCCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLCPPVS*SGVPSH Trigger: ATGACTGGGGACCCCGCTTCAAGAAACTGGCGGACA...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR GCA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTATCAGGAACTTTGCCTaGTCTGCAGTGAGAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CILVHNTDAKLFQKSLQFIRNFA*SAVRGK Trigger: CTTCCCTCTCACTGCAGAGCAGGCAAAGTTCCTGAT...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CCA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTGACCCATTCCAAACCTaGTGCAGAAACTCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CILVHNTDAKLFQKSLQFDPFQT*CRNSGL Trigger: CAGACCTGAGTTTCTGCACCAGGTTTGGAATGGGTC...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR TCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGTTGCCTGCTCTGCAGTaGGAGGGAAGCTTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLLPALQ*EGSFSQ Trigger: CTGTGAGAAGCTTCCCTCTCACTGCAGAGCAGGCAA...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGTGTAAACATGTTGGGTaGAGGTGTGCTGGGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLCKHVG*RCAGRL Trigger: CAGGCGCCCAGCACACCTTCACCCAACATGTTTACA...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTTCCATTCAGGGCATTTaGATCATCCGCATCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CILVHNTDAKLFQKSLQFSIQGI*IIRING Trigger: GCCATTGATGCGGATGATCCAAATGCCCTGAATGGA...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGAGGGGCTGTCCTTCGTaGACATCCTTCGGTAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLRGCPS*TSFGKT Trigger: AGTCTTACCGAAGGATGTGCACGAAGGACAGCCCCT...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGGATGTCCACTGCATGTaGTCTCAAGTGAAACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLDVHCM*SQVKPG Trigger: GCCCGGTTTCACTTGAGAGCACATGCAGTGGACATC...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTTTCTTCAATTTCATGTaGTTCCTTCATAGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSEVYCLYSGTQHRRKAFFNFM*FLHRLL Trigger: GAGGAGCCTATGAAGGAACCACATGAAATTGAAGAA...AGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGGCCCATCATTGCTGTTaGGGTCTGTCAGGATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLAHHCC*GLSGWQ Trigger: TTGCCATCCTGACAGACCCCAACAGCAATGATGGGC...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGATTCTGACAAGCTCTTaGGGAAAGGGTCCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLILTSS*GKGPLE Trigger: CTCCAGAGGACCCTTTCCTCAAGAGCTTGTCAGAAT...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGCCACTTGATTGCCATTaGTGTCCACTGCATGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLPLDCH*CPLHVL Trigger: GAGCACATGCAGTGGACATCAATGGCAATCAAGTGG...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGGGCCATAAGTGGGATTaGCTTCCATGTCTGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLGHKWD*LPCLWL Trigger: AAGCCACAGACATGGAAGGCAATCCCACTTATGGCC...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | TACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAAAAGCTTTTTCCTCTGGAGTTTTCTaGCAAGTTGATTGGCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTQSCFRSLSSLKAFSSGVF*QVDWRD Trigger: ATCCCGCCAATCAACTTGCCAGAAAACTCCAGAGGA...AAAAGCTTTTAAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGCTTTCACACGCAGGATaGAAATGTTGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLLSHAG*KCWTWG Trigger: CCCCCAAGTCCAACATTTCCATCCTGCGTGTGAAAG...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | TACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAAAAGCTTTTCCGTGCAGTCTCCATTaGAGTCACACTGACAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTQSCFRSLSSLKAFPCSLH*SHTDKL Trigger: AAGTTTGTCAGTGTGACTCCAATGGAGACTGCACGG...AAAAGCTTTTAAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| 3UTR CAA 72 bp | TTTTTATTCAGAACGCTGGGGTCAGAGGTGTATTGTTaGTATTCTGGTACACAACACAGACGCAAAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLFRTLGSEVYC*YSGTQHRRKAV Trigger: AACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAGCGTTCTGAATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR TCA 90 bp | TACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAAAAGCTTTTTCCATACCACAAACATaGGAACAAGGATCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTQSCFRSLSSLKAFSIPQT*EQGSAG Trigger: TCCTGCTGATCCTTGTTCTCATGTTTGTGGTATGGA...AAAAGCTTTTAAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTCAGGAAATCCAGTCTTaGATAATGCAATTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CILVHNTDAKLFQKSLQFQEIQS*IMQFHQ Trigger: CTGGTGAAATTGCATTATGCAAGACTGGATTTCCTG...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | TACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAAAAGCTTTTATATATCAGGAACTTTaGCTGCTCTGCAGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTQSCFRSLSSLKAFIYQEL*LLCSER Trigger: CCTCTCACTGCAGAGCAGGCAAAGTTCCTGATATAT...AAAAGCTTTTAAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CCA 90 bp | GGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGTTTTTAGCTAATGGCACTTaGTTTTCTGCAGCAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GQRCIVCILVHNTDAKLFLANGT*FSAATV Trigger: TACTGTTGCTGCAGAAAACCAAGTGCCATTAGCTAA...AAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR TCA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTGAGGGGCGTTGTCATTaGTATCAAGTAAATAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: CILVHNTDAKLFQKSLQFEGRCH*YQVNRF Trigger: AAATCTATTTACTTGATATCAATGACAACGCCCCTC...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR GCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGAATCTGCTGGCTCGCTaGTTTCATACTGAACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLNLLAR*FHTELS Trigger: GGAAAGTTCAGTATGAAAGCAGCGAGCCAGCAGATT...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGCCATTCCAAACCTGGTaGAGAAACTCAGGTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLPFQTW*RNSGLL Trigger: TAACAGACCTGAGTTTCTGCACCAGGTTTGGAATGG...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGTTTTGGGTTTCTTTGTCTTaGGCATATATCAGGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQRCIVCILVHNTDAKLFWVSLS*AYIRNF Trigger: AAAGTTCCTGATATATGCCCAAGACAAAGAAACCCA...AAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGTTGAAAGGCCATAAGTaGGATTGCCTTCCATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLLKGHK*DCLPCL Trigger: CAGACATGGAAGGCAATCCCACTTATGGCCTTTCAA...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR GCA 90 bp | TACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAAAAGCTTTTTATCTGATATTCTGTTaGATATATCGATCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTQSCFRSLSSLKAFYLIFC*IYRSGS Trigger: GGACCCCGATCGATATATGCAACAGAATATCAGATA...AAAAGCTTTTAAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGCTATTTTCAGCCAGTTaGCAGGATCAGACAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLLFSAS*QDQTIL Trigger: CAAAATTGTCTGATCCTGCCAACTGGCTGAAAATAG...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGGAGGGGCGTTGTCATTaGTATCAAGTAAATAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FQSEKGTKRHINPSASLLEGRCH*YQVNRF Trigger: AAATCTATTTACTTGATATCAATGACAACGCCCCTC...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 90 bp | CCAGGGTGTGGGGCTGCGGATCGGACTGGGTACTGTGGCTCAGCATaGATAGGCCTCTCGTCTAGCCGTCTGATTCCCACGGGCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PGCGAADRTGYCGSA*IGLSSSRLIPTGLM Trigger: CATCAAGCCCGTGGGAATCAGACGGCTAGACGAGAGGCCTATCCATGCTGAGCCACAGTACCCAGTCCGATCCGCAGCCCCACACCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS GCA 90 bp | GATGATACACAGAAGGATAGCGATGATGGCGCCCGTGCCAAGCCCTaGACCCACGATCCTGTCCACGTCCGTGCAGTCTCCATTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DDTQKDSDDGARAKP*THDPVHVRAVSIGV Trigger: GACTCCAATGGAGACTGCACGGACGTGGACAGGATCGTGGGTGCAGGGCTTGGCACGGGCGCCATCATCGCTATCCTTCTGTGTATCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTAGCTCCTCAGTCAGGGTaGGCTCCCGGCTCAGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: NWFAAYAKASSKHGASGLAPQSG*APGSGL Trigger: TAAACCTGAGCCGGGAGCCAACCCTGACTGAGGAGC...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACCGCTACTGGAGGAGTaGAGGGAGCTCAAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NWFAAYAKASSKHGASGLPLLEE*RELKEP Trigger: TGGCTCCTTGAGCTCCCTCAACTCCTCCAGTAGCGG...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAATGTCCGCCAGTTTCTaGAAGCGGGGTCCCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSQPTPKPPASTVLVDYRMSASF*KRGPQS Trigger: TGACTGGGGACCCCGCTTCAAGAAACTGGCGGACAT...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS GCA 90 bp | CAGGATGGCAAACCTTCCTGTAGGGTCTCCACCACTGATTCTGTATaGCGCATTCCAGGCCGGCGTGTGGGGCTGATCTTTGTCCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QDGKPSCRVSTTDSV*RIPGRRVGLIFVRD Trigger: GTCACGGACAAAGATCAGCCCCACACGCCGGCCTGGAATGCGGCATACAGAATCAGTGGTGGAGACCCTACAGGAAGGTTTGCCATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGACATACGTCCCAGGCTTaGATCCCTCTGGAACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: GSQPTPKPPASTVLVDYRHTSQA*IPLEQT Trigger: GGTCTGTTCCAGAGGGATCAAAGCCTGGGACGTATG...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACTGATTCCCACGGGCTaGATGGCATCAGGCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: NWFAAYAKASSKHGASGLLIPTG*MASGST Trigger: TGTGGAGCCTGATGCCATCAAGCCCGTGGGAATCAG...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 90 bp | CCACCACTGATTCTGTATGCCGCATTCCAGGCCGGCGTGTGGGGCTaGTCTTTGTCCGTGACAGTTAGGTTGGCTACAATGACGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PPLILYAAFQAGVWG*SLSVTVRLATMTST Trigger: GGTGGACGTCATTGTAGCCAACCTAACTGTCACGGACAAAGATCAGCCCCACACGCCGGCCTGGAATGCGGCATACAGAATCAGTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 90 bp | CGCCTGGGACAGGATCCTGTACCGCAGCATTCCATTCAGGGCATTTaGATCATCCGCATCAATGGCAGTGACCGTCATCACATACGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLGQDPVPQHSIQGI*IIRINGSDRHHIRP Trigger: GGGACGTATGTGATGACGGTCACTGCCATTGATGCGGATGATCCAAATGCCCTGAATGGAATGCTGCGGTACAGGATCCTGTCCCAGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 90 bp | CCGTCTGATTCCCACGGGCTTGATGGCATCAGGCTCCACAGTATCTaGTTGCTGGAGCTGGCTCAAGTCATAGTCCTGGTCTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSDSHGLDGIRLHSI*LLELAQVIVLVFFS Trigger: GGAGAAGAAGACCAGGACTATGACTTGAGCCAGCTCCAGCAACCAGATACTGTGGAGCCTGATGCCATCAAGCCCGTGGGAATCAGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 90 bp | AGCTTTAAGGCCCTCATTAATGAAGTCCCCAATATCCCCAGGGTGTaGGGCTGCGGATCGGACTGGGTACTGTGGCTCAGCATGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFKALINEVPNIPRV*GCGSDWVLWLSMDR Trigger: CCTATCCATGCTGAGCCACAGTACCCAGTCCGATCCGCAGCCCCACACCCTGGGGATATTGGGGACTTCATTAATGAGGGCCTTAAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 90 bp | AGCTGTCCTGAGATGGGGTTGATAATGAAGATGCCCGTTGGAGGCTaGTCAGCTCCTGGCCCAGTGACGCTGTATCTCAGGGAAAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCPEMGLIMKMPVGG*SAPGPVTLYLRERF Trigger: AAACCTTTCCCTGAGATACAGCGTCACTGGGCCAGGAGCTGACCAGCCTCCAACGGGCATCTTCATTATCAACCCCATCTCAGGACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 90 bp | CAAGCCCTGCACCCACGATCCTGTCCACGTCCGTGCAGTCTCCATTaGAGTCACACTGACAAACTTTCACACGCAGGATGGAAATGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QALHPRSCPRPCSLH*SHTDKLSHAGWKCW Trigger: CCAACATTTCCATCCTGCGTGTGAAAGTTTGTCAGTGTGACTCCAATGGAGACTGCACGGACGTGGACAGGATCGTGGGTGCAGGGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAGTGGAGGCCTTCCTCTaGGCGAATGATTTTAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GSQPTPKPPASTVLVDYRVEAFL*ANDFRI Trigger: AATCCTAAAATCATTCGCCAAGAGGAAGGCCTCCAC...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATGTCCTGAGATGGGGTaGATAATGAAGATGCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: NWFAAYAKASSKHGASGLCPEMG*IMKMPV Trigger: AACGGGCATCTTCATTATCAACCCCATCTCAGGACA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATCAATTAAAAGCTGCTaGGCTTGGCGCTCTTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: GSQPTPKPPASTVLVDYRSIKSC*AWRSLS Trigger: GGATAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 90 bp | ATCCGCATCAATGGCAGTGACCGTCATCACATACGTCCCAGGCTTTaGTCCCTCTGGAACAGACCCATTCCAAACCTGGTGCAGAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IRINGSDRHHIRPRL*SLWNRPIPNLVQKL Trigger: GAGTTTCTGCACCAGGTTTGGAATGGGTCTGTTCCAGAGGGATCAAAGCCTGGGACGTATGTGATGACGGTCACTGCCATTGATGCGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 90 bp | GCAGCATTCCATTCAGGGCATTTGGATCATCCGCATCAATGGCAGTaGCCGTCATCACATACGTCCCAGGCTTTGATCCCTCTGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: AAFHSGHLDHPHQWQ*PSSHTSQALIPLEQ Trigger: CTGTTCCAGAGGGATCAAAGCCTGGGACGTATGTGATGACGGTCACTGCCATTGATGCGGATGATCCAAATGCCCTGAATGGAATGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 90 bp | AGTGATGATGTCCCCAGTCTCATTGTTGATTGTAAACATGTTGGGTaGAGGTGTGCTGGGCGCCTGGGACAGGATCCTGTACCGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SDDVPSLIVDCKHVG*RCAGRLGQDPVPQH Trigger: ATGCTGCGGTACAGGATCCTGTCCCAGGCGCCCAGCACACCTTCACCCAACATGTTTACAATCAACAATGAGACTGGGGACATCATCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATTTTCCTGGGTTTCTTaGTCTTGGGCATATATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSQPTPKPPASTVLVDYRFSWVS*SWAYIR Trigger: CCTGATATATGCCCAAGACAAAGAAACCCAGGAAAA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGAGTGATGTTAATTGAGTaGGGTTCTGGAGTTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GSQPTPKPPASTVLVDYRVMLIE*GSGVSQ Trigger: CTGTGAAACTCCAGAACCCAACTCAATTAACATCAC...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATCACCATTAAGCCGGTaGATGGTCCAGTTTCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GSQPTPKPPASTVLVDYRSPLSR*MVQFLL Trigger: TAAAAGAAACTGGACCATCAACCGGCTTAATGGTGA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTGGCGCCGTGGGGTCGTaGTCAGCAGCTTTAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CILVHNTDAKLFQKSLQFGAVGS*SAALRP Trigger: GGGCCTTAAAGCTGCTGACAACGACCCCACGGCGCC...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS TCA 90 bp | GAGGGAAGCTTCTCACAGCATACACCGTGCCGTCCTCGTCCACCTTaGAATCTGCTGGCTCGCTGCTTTCATACTGAACTTTCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGSFSQHTPCRPRPP*NLLARCFHTELSFF Trigger: GAAAAAGGAAAGTTCAGTATGAAAGCAGCGAGCCAGCAGATTTCAAGGTGGACGAGGACGGCACGGTGTATGCTGTGAGAAGCTTCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 90 bp | TTTCTTTGTCTTGGGCATATATCAGGAACTTTGCCTGCTCTGCAGTaGGAGGGAAGCTTCTCACAGCATACACCGTGCCGTCCTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLCLGHISGTLPALQ*EGSFSQHTPCRPRP Trigger: TGGACGAGGACGGCACGGTGTATGCTGTGAGAAGCTTCCCTCTCACTGCAGAGCAGGCAAAGTTCCTGATATATGCCCAAGACAAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 90 bp | GATGGGGTTGATAATGAAGATGCCCGTTGGAGGCTGGTCAGCTCCTaGCCCAGTGACGCTGTATCTCAGGGAAAGGTTTTTATCTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: DGVDNEDARWRLVSS*PSDAVSQGKVFISI Trigger: GATAGAGATAAAAACCTTTCCCTGAGATACAGCGTCACTGGGCCAGGAGCTGACCAGCCTCCAACGGGCATCTTCATTATCAACCCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTACAGATCAGGAAATCCAGTCTaGCATAATGCAATTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GSQPTPKPPASTVLVDYRSGNPV*HNAISP Trigger: TGGTGAAATTGCATTATGCAAGACTGGATTTCCTGA...TCTGTAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CAA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATCCCCAGTCTCATTGTaGATTGTAAACATGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NWFAAYAKASSKHGASGLSPVSL*IVNMLG Trigger: ACCCAACATGTTTACAATCAACAATGAGACTGGGGA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTAGTATCTGATATTCTGTaGCATATATCGATCGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NWFAAYAKASSKHGASGLVSDIL*HISIGV Trigger: GACCCCGATCGATATATGCAACAGAATATCAGATAC...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTCTGATTCCCACGGGCTaGATGGCATCAGGCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LGSEVYCLYSGTQHRRKALIPTG*MASGST Trigger: TGTGGAGCCTGATGCCATCAAGCCCGTGGGAATCAG...AGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS TCA 90 bp | AATTTTGTGTATCTGATATTCTGTTGCATATATCGATCGGGGTCCTaGGCAGTGAGCGTGGTCAGCATGGTACCTGCGTGGAGGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NFVYLIFCCIYRSGS*AVSVVSMVPAWRPS Trigger: GGAAGGCCTCCACGCAGGTACCATGCTGACCACGCTCACTGCTCAGGACCCCGATCGATATATGCAACAGAATATCAGATACACAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CAA 90 bp | AACTGGTTCGCAGCCTACGCCAAAGCCTCCAGCAAGCACGGTGCTAGTGGACTATCTATTTTCAGCCAGTaGGCAGGATCAGACAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: NWFAAYAKASSKHGASGLSIFSQ*AGSDNF Trigger: AAAATTGTCTGATCCTGCCAACTGGCTGAAAATAGA...TAGTCCACTAGCACCGTGCTTGCTGGAGGCTTTGGCGTAGGCTGCGAACCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 90 bp | CTCAGGTTTACAGCTACCTGCCACTTTTCCTGGGTTTCTTTGTCTTaGGCATATATCAGGAACTTTGCCTGCTCTGCAGTGAGAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRFTATCHFSWVSLS*AYIRNFACSAVRGK Trigger: CTTCCCTCTCACTGCAGAGCAGGCAAAGTTCCTGATATATGCCCAAGACAAAGAAACCCAGGAAAAGTGGCAGGTAGCTGTAAACCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 90 bp | GTGCTTGGCAAGTTGTCTAGGGAATACTATTTCTTCAATTTCATGTaGTTCCTTCATAGGCTCCTCAGTCAGGGTTGGCTCCCGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLGKLSREYYFFNFM*FLHRLLSQGWLPAQ Trigger: CTGAGCCGGGAGCCAACCCTGACTGAGGAGCCTATGAAGGAACCACATGAAATTGAAGAAATAGTATTCCCTAGACAACTTGCCAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGGGCGCCGTGGGGTCGTaGTCAGCAGCTTTAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FQSEKGTKRHINPSASLLGAVGS*SAALRP Trigger: GGGCCTTAAAGCTGCTGACAACGACCCCACGGCGCC...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS GCA 90 bp | CCTTCGGTAAGACTGCGCTGTAAACATCTTCAGGAAATCCAGTCTTaGATAATGCAATTTCACCAGAAGCCTCCACAGACGCCTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSVRLRCKHLQEIQS*IMQFHQKPPQTPEA Trigger: TGCTTCAGGCGTCTGTGGAGGCTTCTGGTGAAATTGCATTATGCAAGACTGGATTTCCTGAAGATGTTTACAGCGCAGTCTTACCGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CAA 90 bp | CTGGGGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGATTCTGACAAGCTCTaGAGGAAAGGGTCCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGSEVYCLYSGTQHRRKADSDKL*RKGSSG Trigger: TCCAGAGGACCCTTTCCTCAAGAGCTTGTCAGAATC...AGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CAA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTCATACGTCCCAGGCTTaGATCCCTCTGGAACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: CILVHNTDAKLFQKSLQFHTSQA*IPLEQT Trigger: GGTCTGTTCCAGAGGGATCAAAGCCTGGGACGTATG...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CAA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGCCGCTACTGGAGGAGTaGAGGGAGCTCAAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FQSEKGTKRHINPSASLLPLLEE*RELKEP Trigger: TGGCTCCTTGAGCTCCCTCAACTCCTCCAGTAGCGG...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 90 bp | GGACAAACATCCTATTCGTTTCAAAGTCAATTGGTTTTACCACTGTaGCTAGCCCATCATTGCTGTTGGGGTCTGTCAGGATGGCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: GQTSYSFQSQLVLPL*LAHHCCWGLSGWQT Trigger: GGTTTGCCATCCTGACAGACCCCAACAGCAATGATGGGCTAGTCACAGTGGTAAAACCAATTGACTTTGAAACGAATAGGATGTTTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGATGTCCGCCAGTTTCTaGAAGCGGGGTCCCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FQSEKGTKRHINPSASLLMSASF*KRGPQS Trigger: TGACTGGGGACCCCGCTTCAAGAAACTGGCGGACAT...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTATAGGCGGGATTCCATaGTCAGAAGCAAGGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CILVHNTDAKLFQKSLQFIGGIP*SEARKV Trigger: TACCTTCCTTGCTTCTGACAATGGAATCCCGCCTAT...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| CDS CCA 90 bp | TTATCTCTTACATCATCTTCTGGGTCAATTAAAAGCTGCTTGGCTTaGCGCTCTTTATCCCGCCGTTTCATCCATACCACAAACATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLTSSSGSIKSCLA*RSLSRRFIHTTNMR Trigger: TCTCATGTTTGTGGTATGGATGAAACGGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGACCCAGAAGATGATGTAAGAGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTTTTTCCTGGGTTTCTTaGTCTTGGGCATATATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CILVHNTDAKLFQKSLQFFSWVS*SWAYIR Trigger: CCTGATATATGCCCAAGACAAAGAAACCCAGGAAAA...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| CDS-3UTR CAA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGGATTCTGACAAGCTCTaGAGGAAAGGGTCCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FQSEKGTKRHINPSASLLDSDKL*RKGSSG Trigger: TCCAGAGGACCCTTTCCTCAAGAGCTTGTCAGAATC...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS-3UTR CAA 90 bp | TGTATTCTGGTACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTTCCCCAGTCTCATTGTaGATTGTAAACATGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CILVHNTDAKLFQKSLQFSPVSL*IVNMLG Trigger: ACCCAACATGTTTACAATCAACAATGAGACTGGGGA...AAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| CDS-3UTR CAA 90 bp | TACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAAAAGCTTTTGTGGAGGCCTTCCTCTaGGCGAATGATTTTAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: YTTQTQSCFRSLSSLKAFVEAFL*ANDFRI Trigger: AATCCTAAAATCATTCGCCAAGAGGAAGGCCTCCAC...AAAAGCTTTTAAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
||
| CDS-3UTR CAA 90 bp | GGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGTTTTCACCATTAAGCCGGTaGATGGTCCAGTTTCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GQRCIVCILVHNTDAKLFSPLSR*MVQFLL Trigger: TAAAAGAAACTGGACCATCAACCGGCTTAATGGTGA...AAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| CDS GCA 90 bp | TTCAATATATTATCTCTTACATCATCTTCTGGGTCAATTAAAAGCTaGTTGGCTTGGCGCTCTTTATCCCGCCGTTTCATCCATACCACA | + |
|
Preference number: 5 (lower is better) Translates to: FNILSLTSSSGSIKS*LAWRSLSRRFIHTT Trigger: TGTGGTATGGATGAAACGGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGACCCAGAAGATGATGTAAGAGATAATATATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CCA 90 bp | ATATATTATCTCTTACATCATCTTCTGGGTCAATTAAAAGCTGCTTaGCTTGGCGCTCTTTATCCCGCCGTTTCATCCATACCACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: IYYLLHHLLGQLKAA*LGALYPAVSSIPQT Trigger: TGTTTGTGGTATGGATGAAACGGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGACCCAGAAGATGATGTAAGAGATAATATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CAA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGTTGCTGAATTTCACATaGAGAAGGGGCTGTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FQSEKGTKRHINPSASLLLLNFT*RRGCPS Trigger: CGAAGGACAGCCCCTTCTCAATGTGAAATTCAGCAA...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| CDS-3UTR CAA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGTGTCCTGAGATGGGGTaGATAATGAAGATGCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: FQSEKGTKRHINPSASLLCPEMG*IMKMPV Trigger: AACGGGCATCTTCATTATCAACCCCATCTCAGGACA...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CAA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGATAGGCGGGATTCCATaGTCAGAAGCAAGGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FQSEKGTKRHINPSASLLIGGIP*SEARKV Trigger: TACCTTCCTTGCTTCTGACAATGGAATCCCGCCTAT...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CAA 90 bp | GGTCAGAGGTGTATTGTTTGTATTCTGGTACACAACACAGACGCAAAGCTGTTTTTCATGTCAATAACATaGATGACAATGTCAATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQRCIVCILVHNTDAKLFFMSIT*MTMSMG Trigger: CCCCATTGACATTGTCATCAATGTTATTGACATGAA...AAACAGCTTTGCGTCTGTGTTGTGTACCAGAATACAAACAATACACCTCTGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| CDS-3UTR CAA 90 bp | TACACAACACAGACGCAAAGCTGTTTCAGAAGTCTCTCCAGTTTAAAAGCTTTTGTATCTGATATTCTGTaGCATATATCGATCGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YTTQTQSCFRSLSSLKAFVSDIL*HISIGV Trigger: GACCCCGATCGATATATGCAACAGAATATCAGATAC...AAAAGCTTTTAAACTGGAGAGACTTCTGAAACAGCTTTGCGTCTGTGTTGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| CDS-3UTR CAA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGTCTATTTTCAGCCAGTaGGCAGGATCAGACAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: FQSEKGTKRHINPSASLLSIFSQ*AGSDNF Trigger: AAAATTGTCTGATCCTGCCAACTGGCTGAAAATAGA...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS-3UTR CAA 90 bp | TTCCAATCTGAAAAAGGTACAAAAAGGCACATAAATCCCAGTGCTTCTTTACTGTTCATGTCAATAACATaGATGACAATGTCAATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FQSEKGTKRHINPSASLLFMSIT*MTMSMG Trigger: CCCCATTGACATTGTCATCAATGTTATTGACATGAA...CAGTAAAGAAGCACTGGGATTTATGTGCCTTTTTGTACCTTTTTCAGATTGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS GCA 72 bp | CAGAAGGATAGCGATGATGGCGCCCGTGCCAAGCCCTaGACCCACGATCCTGTCCACGTCCGTGCAGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QKDSDDGARAKP*THDPVHVRAVS Trigger: GGAGACTGCACGGACGTGGACAGGATCGTGGGTGCAGGGCTTGGCACGGGCGCCATCATCGCTATCCTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CCA 72 bp | CCCAATATCCCCAGGGTGTGGGGCTGCGGATCGGACTaGGTACTGTGGCTCAGCATGGATAGGCCTCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PNIPRVWGCGSD*VLWLSMDRPLV Trigger: GACGAGAGGCCTATCCATGCTGAGCCACAGTACCCAGTCCGATCCGCAGCCCCACACCCTGGGGATATTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CCA 72 bp | GCCCTCATTAATGAAGTCCCCAATATCCCCAGGGTGTaGGGCTGCGGATCGGACTGGGTACTGTGGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALINEVPNIPRV*GCGSDWVLWLS Trigger: GCTGAGCCACAGTACCCAGTCCGATCCGCAGCCCCACACCCTGGGGATATTGGGGACTTCATTAATGAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CAA 90 bp | TCAGCATGGATAGGCCTCTCGTCTAGCCGTCTGATTCCCACGGGCTaGATGGCATCAGGCTCCACAGTATCTGGTTGCTGGAGCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SAWIGLSSSRLIPTG*MASGSTVSGCWSWL Trigger: GAGCCAGCTCCAGCAACCAGATACTGTGGAGCCTGATGCCATCAAGCCCGTGGGAATCAGACGGCTAGACGAGAGGCCTATCCATGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS GCA 72 bp | GGGGTCCTGAGCAGTGAGCGTGGTCAGCATGGTACCTaGGTGGAGGCCTTCCTCTTGGCGAATGATTTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVLSSERGQHGT*VEAFLLANDFR Trigger: CCTAAAATCATTCGCCAAGAGGAAGGCCTCCACGCAGGTACCATGCTGACCACGCTCACTGCTCAGGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CCA 72 bp | GAGATGGGGTTGATAATGAAGATGCCCGTTGGAGGCTaGTCAGCTCCTGGCCCAGTGACGCTGTATCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EMGLIMKMPVGG*SAPGPVTLYLR Trigger: CCTGAGATACAGCGTCACTGGGCCAGGAGCTGACCAGCCTCCAACGGGCATCTTCATTATCAACCCCATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CCA 72 bp | TCCCACGGGCTTGATGGCATCAGGCTCCACAGTATCTaGTTGCTGGAGCTGGCTCAAGTCATAGTCCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SHGLDGIRLHSI*LLELAQVIVLV Trigger: GACCAGGACTATGACTTGAGCCAGCTCCAGCAACCAGATACTGTGGAGCCTGATGCCATCAAGCCCGTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CCA 72 bp | CACCCACGATCCTGTCCACGTCCGTGCAGTCTCCATTaGAGTCACACTGACAAACTTTCACACGCAGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: HPRSCPRPCSLH*SHTDKLSHAGW Trigger: CCATCCTGCGTGTGAAAGTTTGTCAGTGTGACTCCAATGGAGACTGCACGGACGTGGACAGGATCGTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CAA 90 bp | GCCACAGTGATGATGTCCCCAGTCTCATTGTTGATTGTAAACATGTaGGGTGAAGGTGTGCTGGGCGCCTGGGACAGGATCCTGTACCGC | + |
|
Preference number: 6 (lower is better) Translates to: ATVMMSPVSLLIVNM*GEGVLGAWDRILYR Trigger: GCGGTACAGGATCCTGTCCCAGGCGCCCAGCACACCTTCACCCAACATGTTTACAATCAACAATGAGACTGGGGACATCATCACTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CAA 90 bp | TCTGATTCCCACGGGCTTGATGGCATCAGGCTCCACAGTATCTGGTaGCTGGAGCTGGCTCAAGTCATAGTCCTGGTCTTCTTCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SDSHGLDGIRLHSIW*LELAQVIVLVFFSS Trigger: GGAGGAGAAGAAGACCAGGACTATGACTTGAGCCAGCTCCAGCAACCAGATACTGTGGAGCCTGATGCCATCAAGCCCGTGGGAATCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 72 bp | TATTCTGTTGCATATATCGATCGGGGTCCTGAGCAGTaGGCGTGGTCAGCATGGTACCTGCGTGGAGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YSVAYIDRGPEQ*AWSAWYLRGGL Trigger: AAGGCCTCCACGCAGGTACCATGCTGACCACGCTCACTGCTCAGGACCCCGATCGATATATGCAACAGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 72 bp | TTCATGTGGTTCCTTCATAGGCTCCTCAGTCAGGGTTaGCTCCCGGCTCAGGTTTACAGCTACCTGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: FMWFLHRLLSQG*LPAQVYSYLPL Trigger: AAGTGGCAGGTAGCTGTAAACCTGAGCCGGGAGCCAACCCTGACTGAGGAGCCTATGAAGGAACCACATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 72 bp | CTTGGGCATATATCAGGAACTTTGCCTGCTCTGCAGTaGGAGGGAAGCTTCTCACAGCATACACCGTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LGHISGTLPALQ*EGSFSQHTPCR Trigger: ACGGCACGGTGTATGCTGTGAGAAGCTTCCCTCTCACTGCAGAGCAGGCAAAGTTCCTGATATATGCCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 72 bp | AGATGCCCGTTGGAGGCTGGTCAGCTCCTGGCCCAGTaGCGCTGTATCTCAGGGAAAGGTTTTTATCTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: RCPLEAGQLLAQ*RCISGKGFYLY Trigger: ATAGAGATAAAAACCTTTCCCTGAGATACAGCGTCACTGGGCCAGGAGCTGACCAGCCTCCAACGGGCATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 72 bp | AATGGCAGTGACCGTCATCACATACGTCCCAGGCTTTaGTCCCTCTGGAACAGACCCATTCCAAACCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: NGSDRHHIRPRL*SLWNRPIPNLV Trigger: CACCAGGTTTGGAATGGGTCTGTTCCAGAGGGATCAAAGCCTGGGACGTATGTGATGACGGTCACTGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 72 bp | GTCCCCAGTCTCATTGTTGATTGTAAACATGTTGGGTaGAGGTGTGCTGGGCGCCTGGGACAGGATCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VPSLIVDCKHVG*RCAGRLGQDPV Trigger: TACAGGATCCTGTCCCAGGCGCCCAGCACACCTTCACCCAACATGTTTACAATCAACAATGAGACTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CCA 72 bp | GATAATGAAGATGCCCGTTGGAGGCTGGTCAGCTCCTaGCCCAGTGACGCTGTATCTCAGGGAAAGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DNEDARWRLVSS*PSDAVSQGKVF Trigger: AAAAACCTTTCCCTGAGATACAGCGTCACTGGGCCAGGAGCTGACCAGCCTCCAACGGGCATCTTCATTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS CAA 72 bp | AGAGGCTTTGTGACTGACAGCTGTCCTGAGATGGGGTaGATAATGAAGATGCCCGTTGGAGGCTGGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGFVTDSCPEMG*IMKMPVGGWSA Trigger: AGCTGACCAGCCTCCAACGGGCATCTTCATTATCAACCCCATCTCAGGACAGCTGTCAGTCACAAAGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
||
| CDS TCA 72 bp | TTCTCACAGCATACACCGTGCCGTCCTCGTCCACCTTaGAATCTGCTGGCTCGCTGCTTTCATACTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: FSQHTPCRPRPP*NLLARCFHTEL Trigger: AAGTTCAGTATGAAAGCAGCGAGCCAGCAGATTTCAAGGTGGACGAGGACGGCACGGTGTATGCTGTGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS TCA 72 bp | CATTCAGGGCATTTGGATCATCCGCATCAATGGCAGTaGCCGTCATCACATACGTCCCAGGCTTTGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: HSGHLDHPHQWQ*PSSHTSQALIP Trigger: AGGGATCAAAGCCTGGGACGTATGTGATGACGGTCACTGCCATTGATGCGGATGATCCAAATGCCCTGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS TCA 72 bp | TATCTGATATTCTGTTGCATATATCGATCGGGGTCCTaGGCAGTGAGCGTGGTCAGCATGGTACCTGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: YLIFCCIYRSGS*AVSVVSMVPAW Trigger: CCACGCAGGTACCATGCTGACCACGCTCACTGCTCAGGACCCCGATCGATATATGCAACAGAATATCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CAA 90 bp | TCCCGGCTCAGGTTTACAGCTACCTGCCACTTTTCCTGGGTTTCTTaGTCTTGGGCATATATCAGGAACTTTGCCTGCTCTGCAGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SRLRFTATCHFSWVS*SWAYIRNFACSAVR Trigger: TCTCACTGCAGAGCAGGCAAAGTTCCTGATATATGCCCAAGACAAAGAAACCCAGGAAAAGTGGCAGGTAGCTGTAAACCTGAGCCGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS GCA 72 bp | GTTCTCCACTTGATTGCCATTGATGTCCACTGCATGTaGTCTCAAGTGAAACCGGGCTATCAGCTCTCGATC | + |
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Preference number: 6 (lower is better) Translates to: VLHLIAIDVHCM*SQVKPGYQLSI Trigger: GATCGAGAGCTGATAGCCCGGTTTCACTTGAGAGCACATGCAGTGGACATCAATGGCAATCAAGTGGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CAA 90 bp | GCTCAGGTTTACAGCTACCTGCCACTTTTCCTGGGTTTCTTTGTCTaGGGCATATATCAGGAACTTTGCCTGCTCTGCAGTGAGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: AQVYSYLPLFLGFFV*GIYQELCLLCSERE Trigger: TTCCCTCTCACTGCAGAGCAGGCAAAGTTCCTGATATATGCCCAAGACAAAGAAACCCAGGAAAAGTGGCAGGTAGCTGTAAACCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS GCA 72 bp | CGTATACTGTTGCACTTTCTCTCGATCCAGACCAGCTaGCACAGTGATGATGTCCCCAGTCTCATTGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: RILLHFLSIQTS*HSDDVPSLIVD Trigger: ATCAACAATGAGACTGGGGACATCATCACTGTGGCAGCTGGTCTGGATCGAGAGAAAGTGCAACAGTATACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CCA 72 bp | ACATCATCTTCTGGGTCAATTAAAAGCTGCTTGGCTTaGCGCTCTTTATCCCGCCGTTTCATCCATACCACA | + |
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Preference number: 6 (lower is better) Translates to: TSSSGSIKSCLA*RSLSRRFIHTT Trigger: TGTGGTATGGATGAAACGGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGACCCAGAAGATGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CAA 72 bp | TACAGCTACCTGCCACTTTTCCTGGGTTTCTTTGTCTaGGGCATATATCAGGAACTTTGCCTGCTCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: YSYLPLFLGFFV*GIYQELCLLCS Trigger: ACTGCAGAGCAGGCAAAGTTCCTGATATATGCCCAAGACAAAGAAACCCAGGAAAAGTGGCAGGTAGCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CAA 72 bp | AAGTCAATTGGTTTTACCACTGTGACTAGCCCATCATaGCTGTTGGGGTCTGTCAGGATGGCAAACCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: KSIGFTTVTSPS*LLGSVRMANLP Trigger: AGGAAGGTTTGCCATCCTGACAGACCCCAACAGCAATGATGGGCTAGTCACAGTGGTAAAACCAATTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CAA 90 bp | GGGATGACCCAGTCTCTCTTCTGCCTTTGTAGAGCTCCACTGTGCTaGGCAAGTTGTCTAGGGAATACTATTTCTTCAATTTCATGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GMTQSLFCLCRAPLC*ASCLGNTISSISCG Trigger: ACCACATGAAATTGAAGAAATAGTATTCCCTAGACAACTTGCCAAGCACAGTGGAGCTCTACAAAGGCAGAAGAGAGACTGGGTCATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS GCA 72 bp | AGACTGCGCTGTAAACATCTTCAGGAAATCCAGTCTTaGATAATGCAATTTCACCAGAAGCCTCCACAGACG | + |
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Preference number: 6 (lower is better) Translates to: RLRCKHLQEIQS*IMQFHQKPPQT Trigger: CGTCTGTGGAGGCTTCTGGTGAAATTGCATTATGCAAGACTGGATTTCCTGAAGATGTTTACAGCGCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025166.14 |
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| CDS CCA 72 bp | CTCTTACATCATCTTCTGGGTCAATTAAAAGCTGCTTaGCTTGGCGCTCTTTATCCCGCCGTTTCATCCATA | + |
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Preference number: 6 (lower is better) Translates to: LLHHLLGQLKAA*LGALYPAVSSI Trigger: TATGGATGAAACGGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGACCCAGAAGATGATGTAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CAA 72 bp | TCTCTTACATCATCTTCTGGGTCAATTAAAAGCTGCTaGGCTTGGCGCTCTTTATCCCGCCGTTTCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: SLTSSSGSIKSC*AWRSLSRRFIH Trigger: ATGGATGAAACGGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGACCCAGAAGATGATGTAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS TCA 72 bp | TCCTATTCGTTTCAAAGTCAATTGGTTTTACCACTGTaGCTAGCCCATCATTGCTGTTGGGGTCTGTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SYSFQSQLVLPL*LAHHCCWGLSG Trigger: TCCTGACAGACCCCAACAGCAATGATGGGCTAGTCACAGTGGTAAAACCAATTGACTTTGAAACGAATAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS GCA 72 bp | TTATCTCTTACATCATCTTCTGGGTCAATTAAAAGCTaGTTGGCTTGGCGCTCTTTATCCCGCCGTTTCATC | + |
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Preference number: 6 (lower is better) Translates to: LSLTSSSGSIKS*LAWRSLSRRFI Trigger: GATGAAACGGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGACCCAGAAGATGATGTAAGAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CCA 72 bp | AAGTTGTCTAGGGAATACTATTTCTTCAATTTCATGTaGTTCCTTCATAGGCTCCTCAGTCAGGGTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: KLSREYYFFNFM*FLHRLLSQGWL Trigger: GAGCCAACCCTGACTGAGGAGCCTATGAAGGAACCACATGAAATTGAAGAAATAGTATTCCCTAGACAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CAA 72 bp | CAGTCTCTCTTCTGCCTTTGTAGAGCTCCACTGTGCTaGGCAAGTTGTCTAGGGAATACTATTTCTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: QSLFCLCRAPLC*ASCLGNTISSI Trigger: AATTGAAGAAATAGTATTCCCTAGACAACTTGCCAAGCACAGTGGAGCTCTACAAAGGCAGAAGAGAGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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| CDS CAA 90 bp | AATATATTATCTCTTACATCATCTTCTGGGTCAATTAAAAGCTGCTaGGCTTGGCGCTCTTTATCCCGCCGTTTCATCCATACCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: NILSLTSSSGSIKSC*AWRSLSRRFIHTTN Trigger: GTTTGTGGTATGGATGAAACGGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGACCCAGAAGATGATGTAAGAGATAATATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025166.14 ENSMUST00000115850.2 |
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