Pregenerated sensors for CDH17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028217Ensembl transcript IDs: ENSMUST00000029871.12, ENSMUST00000108303.2
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCTCAGGACACCAGCCCAGGGAGGAAGTAACCTGTGTCACATGTaGGCAGAGCTCCTGGATGCCTGTGTCCGGCTGGTCCCAGTTACC | + |
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Preference number: 1 (lower is better) Translates to: LLRTPAQGGSNLCHM*AELLDACVRLVPVT Trigger: GGTAACTGGGACCAGCCGGACACAGGCATCCAGGAGCTCTGCCCACATGTGACACAGGTTACTTCCTCCCTGGGCTGGTGTCCTGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 90 bp | TCCGGAGTTCACACCCAAGGTCTGCTCAGGGCACCTCTGATCCTATaGTCCTGGGAGAGCCAGAGCCCTTGGGAGTGGAGCTTCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SGVHTQGLLRAPLIL*SWESQSPWEWSFLW Trigger: CCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGATCAGAGGTGCCCTGAGCAGACCTTGGGTGTGAACTCCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 90 bp | GTACTGGCTCCGGAGTTCACACCCAAGGTCTGCTCAGGGCACCTCTaGTCCTATGATCCTGGGAGAGCCAGAGCCCTTGGGAGTGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: VLAPEFTPKVCSGHL*SYDPGRARALGSGA Trigger: AGCTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGATCAGAGGTGCCCTGAGCAGACCTTGGGTGTGAACTCCGGAGCCAGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR CCA 90 bp | CAGCCCAGGGAGGAAGTAACCTGTGTCACATGTGGGCAGAGCTCCTaGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: QPREEVTCVTCGQSS*MPVSGWSQLPPMLG Trigger: CCCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCATCCAGGAGCTCTGCCCACATGTGACACAGGTTACTTCCTCCCTGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR GCA 90 bp | AGGATCCTGGGATCCTGGGATCTTGTGGTCCTGGGGGTGTTACAGTaGCTGGGAGTCAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAG | + |
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Preference number: 1 (lower is better) Translates to: RILGSWDLVVLGVLQ*LGVKLLGVVVLAPE Trigger: CTCCGGAGCCAGTACTACAACACCCAGAAGTTTGACTCCCAGGCACTGTAACACCCCCAGGACCACAAGATCCCAGGATCCCAGGATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 90 bp | GGGAGTGGAGCTTCCTCTGGGTGTTGTGAAACTGGCTGGGGAGTTTaGACCAAAATTCTGCTCAGGACACCAGCCCAGGGAGGAAGTAAC | + |
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Preference number: 1 (lower is better) Translates to: GSGASSGCCETGWGV*TKILLRTPAQGGSN Trigger: GTTACTTCCTCCCTGGGCTGGTGTCCTGAGCAGAATTTTGGTTCAAACTCCCCAGCCAGTTTCACAACACCCAGAGGAAGCTCCACTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR GCA 90 bp | CCTCTGGGTGTTGTGAAACTGGCTGGGGAGTTTGAACCAAAATTCTaGTCAGGACACCAGCCCAGGGAGGAAGTAACCTGTGTCACATGT | + |
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Preference number: 1 (lower is better) Translates to: PLGVVKLAGEFEPKF*SGHQPREEVTCVTC Trigger: ACATGTGACACAGGTTACTTCCTCCCTGGGCTGGTGTCCTGAGCAGAATTTTGGTTCAAACTCCCCAGCCAGTTTCACAACACCCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCACCTCTGATCCTATGATCCTGGGAGAGCCAGAGCCCTTGGGAGTGGAGGGAGCTTCCTCTGGGTaGTGTGGGACTGGCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: QGTSDPMILGEPEPLGVEGASSG*CGTGCR Trigger: TCTGCAGCCAGTCCCACAGCACCCAGAGGAAGCTCC...CTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGATCAGAGGTGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR CAA 90 bp | GCTCAGGGCACCTCTGATCCTATGATCCTGGGAGAGCCAGAGCCCTaGGGAGTGGAGCTTCCTCTGGGTGTTGTGAAACTGGCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: AQGTSDPMILGEPEP*GVELPLGVVKLAGE Trigger: CTCCCCAGCCAGTTTCACAACACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGATCAGAGGTGCCCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATCCTGGGATCCTGGGATCTTGTGGTCCTGGGGGTGTTACAGTGCCTGGGAGAGTGGAGCTTCCTCTaGGTGCTGTGGGACTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: RILGSWDLVVLGVLQCLGEWSFL*VLWDWL Trigger: CAGCCAGTCCCACAGCACCCAGAGGAAGCTCCACTC...TCCCAGGCACTGTAACACCCCCAGGACCACAAGATCCCAGGATCCCAGGATCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTACAGTGCCTGGGAGTCAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAGGAGAGCCAGAGCCCTTaGGAGTGGAGCTTCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: VLQCLGVKLLGVVVLAPEESQSP*EWSFLW Trigger: CCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCTC...CTCCGGAGCCAGTACTACAACACCCAGAAGTTTGACTCCCAGGCACTGTAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR CAA 90 bp | GATCCTAGTGTGATCAAGCTCCTAGGATCCTGGGATCCTGGGATCTaGTGGTCCTGGGGGTGTTACAGTGCCTGGGAGTCAAACTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: DPSVIKLLGSWDPGI*WSWGCYSAWESNFW Trigger: CCAGAAGTTTGACTCCCAGGCACTGTAACACCCCCAGGACCACAAGATCCCAGGATCCCAGGATCCTAGGAGCTTGATCACACTAGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTATGATCCTGGGAGAGCCAGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGTTGTCCTCTTCACCTCTaGTCCTATGATCCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: SYDPGRARALGSGASSGCCPLHL*SYDPGI Trigger: AATCCCAGGATCATAGGACCAGAGGTGAAGAGGACA...ACACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAGTTCACACCCAAGGTCAACCTGTGTCACATGTaGGCAGAGCTCCTGGATGCC | + |
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Preference number: 2 (lower is better) Translates to: GVKLLGVVVLAPEFTPKVNLCHM*AELLDA Trigger: GGCATCCAGGAGCTCTGCCCACATGTGACACAGGTT...GACCTTGGGTGTGAACTCCGGAGCCAGTACTACAACACCCAGAAGTTTGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAGTTCACACCCAAGGTCACTGGCTGGGGAGTTTaGACCAAAATTCTGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GVKLLGVVVLAPEFTPKVTGWGV*TKILLR Trigger: CCTGAGCAGAATTTTGGTTCAAACTCCCCAGCCAGT...GACCTTGGGTGTGAACTCCGGAGCCAGTACTACAACACCCAGAAGTTTGACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR-3UTR TCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAAAACAGCTGAGGCATTaGTATAGTGCTTGGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRKQLRH*YSAWCT Trigger: TGTGCACCAAGCACTATATCAATGCCTCAGCTGTTT...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| 3UTR-3UTR GCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGAAGTAGCATAAAATGTTaGAGGACAAGAAGGGCATGC | + |
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Preference number: 2 (lower is better) Translates to: SEATTQGVYSAPLPAQRGSSIKC*RTRRAC Trigger: GCATGCCCTTCTTGTCCTGCAACATTTTATGCTACT...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| 3UTR-3UTR CCA 90 bp | GGTGTTACAGTGCCTGGGAGTCAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAAGGGTGGGGCACTCCTaGTTTATTCCTGATTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: GVTVPGSQTSGCCSTGSGRVGHS*FIPDFS Trigger: ACTAAAATCAGGAATAAACCAGGAGTGCCCCACCCT...TCCGGAGCCAGTACTACAACACCCAGAAGTTTGACTCCCAGGCACTGTAACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGAAGGACAAGAAGGGCATaGCATCAAAGAAATTACAGT | + |
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Preference number: 2 (lower is better) Translates to: SEATTQGVYSAPLPAQRGRTRRA*HQRNYS Trigger: ACTGTAATTTCTTTGATGGCATGCCCTTCTTGTCCT...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTGCTTATTGTCTTATGCTTACCTCCTGCCATCTGATTATCTCTAGTGCTAGGTGTCAGGGAGGGTaGGGCACTCCTGGTTTATTC | + |
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Preference number: 2 (lower is better) Translates to: SVAYCLMLTSCHLIISSARCQGG*GTPGLF Trigger: GAATAAACCAGGAGTGCCCCACCCTCCCTGACACCT...AGCACTAGAGATAATCAGATGGCAGGAGGTAAGCATAAGACAATAAGCAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGATAATGCCAAGTAACCTTTGTTTCTGTTGCTTATTGTCTTATGCTTACAGTTACCTCCAATGTTaGGGTAGATGTTGTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VLIMPSNLCFCCLLSYAYSYLQC*GRCCVL Trigger: GAGGACACAACATCTACCCCAACATTGGAGGTAACT...GTAAGCATAAGACAATAAGCAACAGAAACAAAGGTTACTTGGCATTATCAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 72 bp | CCGGAGTTCACACCCAAGGTCTGCTCAGGGCACCTCTaGTCCTATGATCCTGGGAGAGCCAGAGCCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: PEFTPKVCSGHL*SYDPGRARALG Trigger: CCCAAGGGCTCTGGCTCTCCCAGGATCATAGGATCAGAGGTGCCCTGAGCAGACCTTGGGTGTGAACTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR CCA 72 bp | ACACCAGCCCAGGGAGGAAGTAACCTGTGTCACATGTaGGCAGAGCTCCTGGATGCCTGTGTCCGGCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: TPAQGGSNLCHM*AELLDACVRLV Trigger: GACCAGCCGGACACAGGCATCCAGGAGCTCTGCCCACATGTGACACAGGTTACTTCCTCCCTGGGCTGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR CCA 72 bp | GAGGAAGTAACCTGTGTCACATGTGGGCAGAGCTCCTaGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCA | + |
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Preference number: 3 (lower is better) Translates to: EEVTCVTCGQSS*MPVSGWSQLPP Trigger: TGGAGGTAACTGGGACCAGCCGGACACAGGCATCCAGGAGCTCTGCCCACATGTGACACAGGTTACTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 72 bp | TCTGGTCCTATGATCCTGGGATTGTTAGAGTGCCTGTaGGTGGAGCTTCCTCTGGGTGCTGTGGGACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: SGPMILGLLECL*VELPLGAVGLA Trigger: AGCCAGTCCCACAGCACCCAGAGGAAGCTCCACTCACAGGCACTCTAACAATCCCAGGATCATAGGACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR CCA 72 bp | TGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTaGGGTAGATGTTGTGTCCTCTTCACCTCTGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: CLCPAGPSYLQC*GRCCVLFTSGP Trigger: AGGACCAGAGGTGAAGAGGACACAACATCTACCCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR CCA 72 bp | ATCAAGCTCCTAGGATCCTGGGATCCTGGGATCTTGTaGTCCTGGGGGTGTTACAGTGCCTGGGAGTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: IKLLGSWDPGIL*SWGCYSAWESN Trigger: GTTTGACTCCCAGGCACTGTAACACCCCCAGGACCACAAGATCCCAGGATCCCAGGATCCTAGGAGCTTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 72 bp | GCTTCCTCTGGGTGTTGTGAAACTGGCTGGGGAGTTTaGACCAAAATTCTGCTCAGGACACCAGCCCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: ASSGCCETGWGV*TKILLRTPAQG Trigger: TCCCTGGGCTGGTGTCCTGAGCAGAATTTTGGTTCAAACTCCCCAGCCAGTTTCACAACACCCAGAGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR GCA 72 bp | GGATCCTGGGATCTTGTGGTCCTGGGGGTGTTACAGTaGCTGGGAGTCAAACTTCTGGGTGTTGTAGTACTG | + |
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Preference number: 3 (lower is better) Translates to: GSWDLVVLGVLQ*LGVKLLGVVVL Trigger: CAGTACTACAACACCCAGAAGTTTGACTCCCAGGCACTGTAACACCCCCAGGACCACAAGATCCCAGGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 72 bp | CAGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGTTGTaGAACTGGCTGGGGAGTTTGAACCAAAATTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: QSPWEWSFLWVL*NWLGSLNQNSA Trigger: AGCAGAATTTTGGTTCAAACTCCCCAGCCAGTTTCACAACACCCAGAGGAAGCTCCACTCCCAAGGGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR GCA 72 bp | AGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTaGCCAGAGGGGAAGGTTCAAGTTATGAAGCTAAGG | + |
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Preference number: 3 (lower is better) Translates to: SNNTGCVLSSSS*PEGKVQVMKLR Trigger: CCTTAGCTTCATAACTTGAACCTTCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| 3UTR GCA 72 bp | GTTGTGAAACTGGCTGGGGAGTTTGAACCAAAATTCTaGTCAGGACACCAGCCCAGGGAGGAAGTAACCTGT | + |
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Preference number: 3 (lower is better) Translates to: VVKLAGEFEPKF*SGHQPREEVTC Trigger: ACAGGTTACTTCCTCCCTGGGCTGGTGTCCTGAGCAGAATTTTGGTTCAAACTCCCCAGCCAGTTTCACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 72 bp | TTCAGCTGTCTCTGTGATTCTGAGATCCTGTTATCCTaGGATCCTAGGTTCGTCAGAGCTCCAGGGAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: FSCLCDSEILLS*DPRFVRAPGSQ Trigger: TTGACTCCCTGGAGCTCTGACGAACCTAGGATCTCAGGATAACAGGATCTCAGAATCACAGAGACAGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 72 bp | TGCTCTCATATATCTGACTGGATCCTGTCCTTCTTGTaGTCCTTGTTGTGTCAGAACTCCTCAGAGTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: CSHISDWILSFL*SLLCQNSSEFS Trigger: GCTGAACTCTGAGGAGTTCTGACACAACAAGGATCACAAGAAGGACAGGATCCAGTCAGATATATGAGAGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR GCA 72 bp | CTTACCTCCTGCCATCTGATTATCTCTAGTGCTATCTaGTCTCATATATCTGACTGGATCCTGTCCTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: LTSCHLIISSAI*SHISDWILSFL Trigger: CAAGAAGGACAGGATCCAGTCAGATATATGAGAGCAGATAGCACTAGAGATAATCAGATGGCAGGAGGTAAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 72 bp | GAAGTGATTTTAGATCTGAATCTTGCTTTTCTGGTGTaGTGGTGTAGACTTGCTATGGTGGGAGAATTAGGT | + |
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Preference number: 3 (lower is better) Translates to: EVILDLNLAFLV*WCRLAMVGELG Trigger: ACCTAATTCTCCCACCATAGCAAGTCTACACCATCACACCAGAAAAGCAAGATTCAGATCTAAAATCACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 72 bp | GTTCACATTTTGGATGAAATTAAACAGCTGAGGCATTaGTATAGTGCTTGGTGCACAGACTTGACCATTTCT | + |
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Preference number: 3 (lower is better) Translates to: VHILDEIKQLRH*YSAWCTDLTIS Trigger: AGAAATGGTCAAGTCTGTGCACCAAGCACTATATCAATGCCTCAGCTGTTTAATTTCATCCAAAATGTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| 3UTR-3UTR CAA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACATGGAACCTAGGAAATTaGGTGATAGATAACAGCTAC | + |
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Preference number: 3 (lower is better) Translates to: THFKFSVMLRDEGAQAETWNLGN*VIDNSY Trigger: GTAGCTGTTATCTATCACCAAATTTCCTAGGTTCCA...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| 3UTR TCA 72 bp | AACTTCAATATACAAATAAAACGTGTACAGCAGGTATaGAAGCATGTGGTAGTGAGTAAACCAGACAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: NFNIQIKRVQQV*KHVVVSKPDSS Trigger: TGAGCTGTCTGGTTTACTCACTACCACATGCTTTCATACCTGCTGTACACGTTTTATTTGTATATTGAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| 3UTR TCA 72 bp | TATGAGATTAAACAGCTGGGGACCAGATATAGCCCATaGTGCATAAACTCTACCAATTATAGTTCACATTTT | + |
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Preference number: 3 (lower is better) Translates to: YEIKQLGTRYSP*CINSTNYSSHF Trigger: AAAATGTGAACTATAATTGGTAGAGTTTATGCATCATGGGCTATATCTGGTCCCCAGCTGTTTAATCTCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| 3UTR CCA 72 bp | TCTTTAAGGGCTTCTAGTTGTTTACCTATGTTCTTCTaGATGTCTTTAAGGGAGTTATTTATGCCCTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: SLRASSCLPMFF*MSLRELFMPFY Trigger: ATAGAAGGGCATAAATAACTCCCTTAAAGACATCCAGAAGAACATAGGTAAACAACTAGAAGCCCTTAAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| 3UTR TCA 72 bp | TTTAAGGGAGTTATTTATGCCCTTCTATCACCAACATaGGAAGTGATTTTAGATCTGAATCTTGCTTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: FKGVIYALLSPT*EVILDLNLAFL Trigger: CAGAAAAGCAAGATTCAGATCTAAAATCACTTCTCATGTTGGTGATAGAAGGGCATAAATAACTCCCTTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| CDS-3UTR GCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGACCTTCCATGGGTGGCTaGCCCCCATCATTGATGCGG | + |
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Preference number: 4 (lower is better) Translates to: SEATTQGVYSAPLPAQRGPSMGG*PPSLMR Trigger: CCGCATCAATGATGGGGGGCAGCCACCCATGGAAGG...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| CDS-3UTR TCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGCTTCAGGGGACCGCTaGACTTCCCTTCTTCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRASGDR*TSLLRH Trigger: ATGGCGAAGAAGGGAAGTTCAGCGGTCCCCTGAAGC...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| CDS-3UTR GCA 90 bp | GATCCTATGATCCTGGGAGAGCCAGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTCCTGGGCGAGAGTTCTaGCTCACTGAGCCTTCATAT | + |
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Preference number: 4 (lower is better) Translates to: DPMILGEPEPLGVELPLGPGREF*LTEPSY Trigger: ATATGAAGGCTCAGTGAGGCAGAACTCTCGCCCAGG...ACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGCTCCTGGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTGGGACCCACCTACTTCAGTaGCCACCACTTGTACTCGAT | + |
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Preference number: 4 (lower is better) Translates to: AELLDACVRLVPVTSNVGTHLLQ*PPLVLD Trigger: ATCGAGTACAAGTGGTGGCCACTGAAGTAGGTGGGT...CCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCATCCAGGAGCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
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| CDS-3UTR CCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGCACTGAGGGGATaGCAGAAGAACAAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRGALRG*QKNKPV Trigger: CACAGGCTTGTTCTTCTGCCATCCCCTCAGTGCCCC...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| CDS-3UTR CCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGACTGCCATGCCCACAGTaGGTATCCCATCCTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRLPCPQ*VSHPVC Trigger: GCAGACAGGATGGGATACCCACTGTGGGCATGGCAG...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
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| 3UTR CAA 72 bp | GTGATCAAGCTCCTAGGATCCTGGGATCCTGGGATCTaGTGGTCCTGGGGGTGTTACAGTGCCTGGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIKLLGSWDPGI*WSWGCYSAWES Trigger: TGACTCCCAGGCACTGTAACACCCCCAGGACCACAAGATCCCAGGATCCCAGGATCCTAGGAGCTTGATCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| 3UTR CAA 72 bp | ACCTCTGATCCTATGATCCTGGGAGAGCCAGAGCCCTaGGGAGTGGAGCTTCCTCTGGGTGTTGTGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSDPMILGEPEP*GVELPLGVVKL Trigger: CAGTTTCACAACACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGATCAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCTCCTGGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTGGGCATATTGCCTTTCAGTaGATAACTCACAGTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AELLDACVRLVPVTSNVGHIAFQ*ITHSQA Trigger: GGCCTGACTGTGAGTTATTCACTGAAAGGCAATATG...CCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCATCCAGGAGCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | GGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTGGGGTAGATGTTGTTTCCTGGGATCCTTCTaGGGTAAGCGATATTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GCLCPAGPSYLQCWGRCCFLGSF*GKRYCP Trigger: GGGGCAATATCGCTTACCCCAGAAGGATCCCAGGAA...ACAACATCTACCCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGTTGTGAAACTGGCTGGGGAGTTTCGCTGACGTTTGCTTaGAATATTCGCTGGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RALGSGASSGCCETGWGVSLTFA*NIRWGN Trigger: GTTCCCCCAGCGAATATTCCAAGCAAACGTCAGCGA...AACTCCCCAGCCAGTTTCACAACACCCAGAGGAAGCTCCACTCCCAAGGGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGTCCTCTTCACCTCTGGTCCTATGATCCTGGGATTGTTAGAGTGCCTGTGGCTTCAGGGGACCGCTaGACTTCCCTTCTTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCPLHLWSYDPGIVRVPVASGDR*TSLLRH Trigger: ATGGCGAAGAAGGGAAGTTCAGCGGTCCCCTGAAGC...CACAGGCACTCTAACAATCCCAGGATCATAGGACCAGAGGTGAAGAGGACACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR GCA 90 bp | GATCCTGGGATCCTGGGATCTTGTGGTCCTGGGGGTGTTACAGTGCCTGGGAGTATGAGAATCCAAGGCTaGAAGCTGCAGATGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DPGILGSCGPGGVTVPGSMRIQG*KLQMMN Trigger: GTTCATCATCTGCAGCTTGCAGCCTTGGATTCTCAT...ACTCCCAGGCACTGTAACACCCCCAGGACCACAAGATCCCAGGATCCCAGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCCAGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGTTGTGAAACTGGCTGGAATCTCCACGGGTTCTaGTGCTTTCCAGATATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RARALGSGASSGCCETGWNLHGF*CFPDIL Trigger: GAGAATATCTGGAAAGCACCAGAACCCGTGGAGATT...CCAGCCAGTTTCACAACACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | TCCTATGATCCTGGGAGAGCCAGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGTCATCTGAGGGAACTTTaGGTGTTTGGTCTACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYDPGRARALGSGASSGCHLREL*VFGLQA Trigger: AGCTTGTAGACCAAACACCCAAAGTTCCCTCAGATG...ACACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGATCGCTGACGTTTGCTTaGAATATTCGCTGGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRSLTFA*NIRWGN Trigger: GTTCCCCCAGCGAATATTCCAAGCAAACGTCAGCGA...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGAACCCACCTACTTCAGTaGCCACCACTTGTACTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SEATTQGVYSAPLPAQRGTHLLQ*PPLVLD Trigger: ATCGAGTACAAGTGGTGGCCACTGAAGTAGGTGGGT...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | TTGTGTCCTCTTCACCTCTGGTCCTATGATCCTGGGATTGTTAGAGTGCCTGTGGGGGCACTGAGGGGATaGCAGAAGAACAAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCPLHLWSYDPGIVRVPVGALRG*QKNKPV Trigger: CACAGGCTTGTTCTTCTGCCATCCCCTCAGTGCCCC...CACAGGCACTCTAACAATCCCAGGATCATAGGACCAGAGGTGAAGAGGACACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGTTGTGAAACTGGCTGGGGAGTTAACTGGAATATGACTTaGCTCGGTTCTTGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RALGSGASSGCCETGWGVNWNMT*LGSWPS Trigger: TGAAGGCCAAGAACCGAGTCAAGTCATATTCCAGTT...AACTCCCCAGCCAGTTTCACAACACCCAGAGGAAGCTCCACTCCCAAGGGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR TCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGATGTCATTCACATCTGTaGGGACCAGGTGGAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRCHSHL*GPGGNL Trigger: CAGATTTCCACCTGGTCCTCACAGATGTGAATGACA...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | CTGGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTGGGGTAGATGTTTGTCATTCACATCTGTaGGGACCAGGTGGAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDACVRLVPVTSNVGVDVCHSHL*GPGGNL Trigger: CAGATTTCCACCTGGTCCTCACAGATGTGAATGACA...AACATCTACCCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGACTCCACGGGTTCTGGTaGTTTCCAGATATTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEATTQGVYSAPLPAQRGLHGFW*FPDILS Trigger: AGAGAGAATATCTGGAAAGCACCAGAACCCGTGGAG...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | CAGGGCACCTCTGATCCTATGATCCTGGGAGAGCCAGAGCCCTTGGGAGTGGAGCAGTGGATATGCAAGTaGTTTTCCATTCTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGTSDPMILGEPEPLGVEQWICK*FSILIL Trigger: AAGGATGAGAATGGAAAACCACTTGCATATCCACTG...CTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGATCAGAGGTGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCCAGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGTTGTGAAACTGGCTGGTCAGGATTTTCCGCTTaGAACACAATGCTGCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: RARALGSGASSGCCETGWSGFSA*NTMLLT Trigger: AGTTAGCAGCATTGTGTTCCAAGCGGAAAATCCTGA...CCAGCCAGTTTCACAACACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGATATGCCTTTCACCAGTaGCTCAGGATTTTCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SEATTQGVYSAPLPAQRGYAFHQ*LRIFRL Trigger: CAAGCGGAAAATCCTGAGCCACTGGTGAAAGGCATA...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | CTGGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTGGGGTAGATGTTTATGCCTTTCACCAGTaGCTCAGGATTTTCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LDACVRLVPVTSNVGVDVYAFHQ*LRIFRL Trigger: CAAGCGGAAAATCCTGAGCCACTGGTGAAAGGCATA...AACATCTACCCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR TCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGATGCAAAGAAAACATGTaGGTTCTTTTCCTCCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SEATTQGVYSAPLPAQRGCKENM*VLFLPV Trigger: GACCGGGAGGAAAAGAACTCACATGTTTTCTTTGCA...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGACATATTGCCTTTCAGTaGATAACTCACAGTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRHIAFQ*ITHSQA Trigger: GGCCTGACTGTGAGTTATTCACTGAAAGGCAATATG...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGAATGAGAATCCAAGGCTaGAAGCTGCAGATGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SEATTQGVYSAPLPAQRGMRIQG*KLQMMN Trigger: GTTCATCATCTGCAGCTTGCAGCCTTGGATTCTCAT...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR GCA 90 bp | CAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAGTTCACACCCAAGGTCTGCTCCTCCACGGGTTCTGGTaGTTTCCAGATATTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTSGCCSTGSGVHTQGLLLHGFW*FPDILS Trigger: AGAGAGAATATCTGGAAAGCACCAGAACCCGTGGAG...GAGCAGACCTTGGGTGTGAACTCCGGAGCCAGTACTACAACACCCAGAAGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | GGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTGGGGTAGATGTTGTCCTTCATATTTTGACTaGAGAAACGTGGGTCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLCPAGPSYLQCWGRCCPSYFD*RNVGRL Trigger: CAACCGACCCACGTTTCTCCAGTCAAAATATGAAGG...ACAACATCTACCCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGAAATCTCCACGGGTTCTaGTGCTTTCCAGATATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEATTQGVYSAPLPAQRGNLHGF*CFPDIL Trigger: GAGAATATCTGGAAAGCACCAGAACCCGTGGAGATT...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | GATCCTATGATCCTGGGAGAGCCAGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGGAACTTTGGGTGTTTaGTCTACAAGCTTGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPMILGEPEPLGVELPLGGTLGV*STSLYF Trigger: GAAATACAAGCTTGTAGACCAAACACCCAAAGTTCC...ACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGACATCTGAGGGAACTTTaGGTGTTTGGTCTACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRHLREL*VFGLQA Trigger: AGCTTGTAGACCAAACACCCAAAGTTCCCTCAGATG...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGACCTCATATTCACCAATaGGAAAAAGTCCATCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRPHIHQ*EKVHLR Trigger: CCTCAGATGGACTTTTTCTCATTGGTGAATATGAGG...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAATGCTGCTAACTGGTTaGGTTTCAAAATCAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRMLLTG*VSKSRG Trigger: GCCTCTTGATTTTGAAACTCAACCAGTTAGCAGCAT...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | GTGCCTGGGAGTCAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAGTTCACACCATGCTGCTAACTGGTTaGGTTTCAAAATCAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPGSQTSGCCSTGSGVHTMLLTG*VSKSRG Trigger: GCCTCTTGATTTTGAAACTCAACCAGTTAGCAGCAT...GGTGTGAACTCCGGAGCCAGTACTACAACACCCAGAAGTTTGACTCCCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR GCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGCCAGCCTCTCATATTaGCTTTCAGTGAATAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRASLSY*LSVNNS Trigger: TGAGTTATTCACTGAAAGGCAATATGAGAGGCTGGC...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | TGTTGGGGTAGATGTTGTGTCCTCTTCACCTCTGGTCCTATGATCCTGGGATTGTTGACTAAGGAATACTaGGCCCCTGGGTCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CWGRCCVLFTSGPMILGLLTKEY*APGSFH Trigger: GTGGAATGACCCAGGGGCCCAGTATTCCTTAGTCAA...CAATCCCAGGATCATAGGACCAGAGGTGAAGAGGACACAACATCTACCCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAGTTCACACCCAAGGTCTGCTCTTCAAATACAGTCACTaGAGACAGACATGTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSGCCSTGSGVHTQGLLFKYSH*RQTCRW Trigger: CCACCGACATGTCTGTCTCCAGTGACTGTATTTGAA...GAGCAGACCTTGGGTGTGAACTCCGGAGCCAGTACTACAACACCCAGAAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | GATCCTGGGATCCTGGGATCTTGTGGTCCTGGGGGTGTTACAGTGCCTGGGAGTAATGGTTCATTCTCCTaGACTTCAAATACAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: DPGILGSCGPGGVTVPGSNGSFS*TSNTVT Trigger: AGTGACTGTATTTGAAGTCCAGGAGAATGAACCATT...ACTCCCAGGCACTGTAACACCCCCAGGACCACAAGATCCCAGGATCCCAGGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGATCAGGATTTTCCGCTTaGAACACAATGCTGCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: SEATTQGVYSAPLPAQRGSGFSA*NTMLLT Trigger: AGTTAGCAGCATTGTGTTCCAAGCGGAAAATCCTGA...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAATACTTAAGTTGTACTaGGGACTGTCTTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRILKLY*GLSCFF Trigger: GAAGAAGCAAGACAGTCCTCAGTACAACTTAAGTAT...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGACTTTCCTCATGCGGATaGAGACAACTGCTAAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SEATTQGVYSAPLPAQRGLSSCG*RQLLKL Trigger: TAATTTTAGCAGTTGTCTTCATCCGCATGAGGAAAG...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGACAGTGGATATGCAAGTaGTTTTCCATTCTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRQWICK*FSILIL Trigger: AAGGATGAGAATGGAAAACCACTTGCATATCCACTG...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGAACTTTGGGTGTTTaGTCTACAAGCTTGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRGTLGV*STSLYF Trigger: GAAATACAAGCTTGTAGACCAAACACCCAAAGTTCC...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | CCAAAATTCTGCTCAGGACACCAGCCCAGGGAGGAAGTAACCTGTGTCACATGTCCTCATATTCACCAATaGGAAAAAGTCCATCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKFCSGHQPREEVTCVTCPHIHQ*EKVHLR Trigger: CCTCAGATGGACTTTTTCTCATTGGTGAATATGAGG...ACATGTGACACAGGTTACTTCCTCCCTGGGCTGGTGTCCTGAGCAGAATTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTCAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAGTTCACACCCAAGGTCATACTTAAGTTGTACTaGGGACTGTCTTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVKLLGVVVLAPEFTPKVILKLY*GLSCFF Trigger: GAAGAAGCAAGACAGTCCTCAGTACAACTTAAGTAT...GACCTTGGGTGTGAACTCCGGAGCCAGTACTACAACACCCAGAAGTTTGACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR GCA 90 bp | GGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTGGGGTAGATGTTGTAATTTCCAGTGGATATaGAAGTGGTTTTCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GCLCPAGPSYLQCWGRCCNFQWI*KWFSIL Trigger: GAGAATGGAAAACCACTTGCATATCCACTGGAAATT...ACAACATCTACCCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGACACATAAATTTCCAGTaGATATGCAAGTGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEATTQGVYSAPLPAQRGHINFQ*ICKWFS Trigger: GGAAAACCACTTGCATATCCACTGGAAATTTATGTG...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAAATGGTTCATTCTCCTaGACTTCAAATACAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRNGSFS*TSNTVT Trigger: AGTGACTGTATTTGAAGTCCAGGAGAATGAACCATT...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR GCA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGACTTCAGACAGAGTCTTaGTTCCATAATTTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRLQTES*FHNLMF Trigger: AAACATCAAATTATGGAAGCAAGACTCTGTCTGAAG...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR GCA 90 bp | GGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTGGGGTAGATGTTGTCTTCAGACAGAGTCTTaGTTCCATAATTTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GCLCPAGPSYLQCWGRCCLQTES*FHNLMF Trigger: AAACATCAAATTATGGAAGCAAGACTCTGTCTGAAG...ACAACATCTACCCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR GCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACACCCATCCTGTCTGCCTaGTGGCCGGAAACAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETPILSA*WPETAS Trigger: GGAAGCTGTTTCCGGCCAGCAGGCAGACAGGATGGG...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | ATTATACTGAACAGGTGTCAGGGAGGGTGGGGCACTCCTGGTTTATTCCTGATTGATGCTGTTACCCAATaGTTCATTCTCCTGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: IILNRCQGGWGTPGLFLIDAVTQ*FILLDF Trigger: GAAGTCCAGGAGAATGAACCATTGGGTAACAGCATC...AATCAGGAATAAACCAGGAGTGCCCCACCCTCCCTGACACCTGTTCAGTATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| 3UTR CAA 72 bp | ACCGCCATTAACAACATTAACAGCACAGAGAAGCTGTaGCCCATGTTAAAGAACAAGGCTCCCACTTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TAINNINSTEKL*PMLKNKAPTYP Trigger: GGGGTAAGTGGGAGCCTTGTTCTTTAACATGGGCAACAGCTTCTCTGTGCTGTTAATGTTGTTAATGGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR GCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACAGTATCCCATCCTGTCTaGCTGCTGGCCGGAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETVSHPV*LLAGNS Trigger: GCTGTTTCCGGCCAGCAGGCAGACAGGATGGGATAC...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | CCAAAATTCTGCTCAGGACACCAGCCCAGGGAGGAAGTAACCTGTGTCACATGTCACATAAATTTCCAGTaGATATGCAAGTGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKFCSGHQPREEVTCVTCHINFQ*ICKWFS Trigger: GGAAAACCACTTGCATATCCACTGGAAATTTATGTG...ACATGTGACACAGGTTACTTCCTCCCTGGGCTGGTGTCCTGAGCAGAATTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACAATCCTGTCTGCCTGCTaGCCGGAAACAGCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETILSAC*PETASF Trigger: GAAGGAAGCTGTTTCCGGCCAGCAGGCAGACAGGAT...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR GCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACACCTGGGCGAGAGTTCTaGCTCACTGAGCCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETPGREF*LTEPSY Trigger: ATATGAAGGCTCAGTGAGGCAGAACTCTCGCCCAGG...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR GCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACATCCTCAAAGCGTGTGTaGCTGGTGGAGAGTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETSSKRV*LVESLA Trigger: TGCTAGACTCTCCACCAGGCACACACGCTTTGAGGA...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACATTCCTGGGATCCTTCTaGGGTAAGCGATATTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETFLGSF*GKRYCP Trigger: GGGGCAATATCGCTTACCCCAGAAGGATCCCAGGAA...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACATCCACTATAGCTCCATaGGAATCCAAGGCTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETSTIAP*ESKAAS Trigger: GCTTGCAGCCTTGGATTCTCATGGAGCTATAGTGGA...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR GCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACAGTATACCAACTGCCATaGCCACAGTGGGTATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETVYQLP*PQWVSH Trigger: ATGGGATACCCACTGTGGGCATGGCAGTTGGTATAC...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACATTGACTAAGGAATACTaGGCCCCTGGGTCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETLTKEY*APGSFH Trigger: GTGGAATGACCCAGGGGCCCAGTATTCCTTAGTCAA...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTTAAGGGCTTCTAGTTGTTTACCTATGTTCTTCTGGATGTCTTTAAGGGAGAAAAAGTCCATCTaGGGGAACTTTGGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLRASSCLPMFFWMSLREKKSI*GNFGCL Trigger: CAAACACCCAAAGTTCCCTCAGATGGACTTTTTCTC...CCTTAAAGACATCCAGAAGAACATAGGTAAACAACTAGAAGCCCTTAAAGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR GCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACATGGGGTAAGCGATATTaGCCCTGTTTTGCTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETWGKRY*PCFAVD Trigger: ATCGACAGCAAAACAGGGGCAATATCGCTTACCCCA...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR GCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACACAGAAGTATACCAACTaGCATGCCCACAGTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETQKYTN*HAHSGY Trigger: ATACCCACTGTGGGCATGGCAGTTGGTATACTTCTG...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACACTCGAAAGTCACAGCTaGAGGGTTGGTCTTAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETLESHS*RVGLKL Trigger: CAGTTTAAGACCAACCCTCCAGCTGTGACTTTCGAG...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACAAACTGGAATATGACTTaGCTCGGTTCTTGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETNWNMT*LGSWPS Trigger: TGAAGGCCAAGAACCGAGTCAAGTCATATTCCAGTT...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACAGAGAAAAAGTCCATCTaGGGGAACTTTGGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETEKKSI*GNFGCL Trigger: CAAACACCCAAAGTTCCCTCAGATGGACTTTTTCTC...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | GTTCTGATAATGCCAAGTAACCTTTGTTTCTGTTGCTTATTGTCTTATGCTTACCTCGAAAGTCACAGCTaGAGGGTTGGTCTTAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLIMPSNLCFCCLLSYAYLESHS*RVGLKL Trigger: CAGTTTAAGACCAACCCTCCAGCTGTGACTTTCGAG...GTAAGCATAAGACAATAAGCAACAGAAACAAAGGTTACTTGGCATTATCAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACACCTTCATATTTTGACTaGAGAAACGTGGGTCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETPSYFD*RNVGRL Trigger: CAACCGACCCACGTTTCTCCAGTCAAAATATGAAGG...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACATTCAAATACAGTCACTaGAGACAGACATGTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETFKYSH*RQTCRW Trigger: CCACCGACATGTCTGTCTCCAGTGACTGTATTTGAA...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACAGATGCTGTTACCCAATaGTTCATTCTCCTGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETDAVTQ*FILLDF Trigger: GAAGTCCAGGAGAATGAACCATTGGGTAACAGCATC...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACACTTCCTTCCACACACTaGCAGAAAGTAACTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETLPSTH*QKVTGK Trigger: CTTACCAGTTACTTTCTGCCAGTGTGTGGAAGGAAG...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR TCA 90 bp | GTTCTGATAATGCCAAGTAACCTTTGTTTCTGTTGCTTATTGTCTTATGCTTACTGCAAAGAAAACATGTaGGTTCTTTTCCTCCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLIMPSNLCFCCLLSYAYCKENM*VLFLPV Trigger: GACCGGGAGGAAAAGAACTCACATGTTTTCTTTGCA...GTAAGCATAAGACAATAAGCAACAGAAACAAAGGTTACTTGGCATTATCAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| 3UTR CAA 72 bp | CTGATAATGCCAAGTAACCTTTGTTTCTGTTGCTTATaGTCTTATGCTTACCTCCTGCCATCTGATTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIMPSNLCFCCL*SYAYLLPSDYL Trigger: GAGATAATCAGATGGCAGGAGGTAAGCATAAGACAATAAGCAACAGAAACAAAGGTTACTTGGCATTATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGATAATGCCAAGTAACCTTTGTTTCTGTTGCTTATTGTCTTATGCTTACGCCAGCCTCTCATATTaGCTTTCAGTGAATAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLIMPSNLCFCCLLSYAYASLSY*LSVNNS Trigger: TGAGTTATTCACTGAAAGGCAATATGAGAGGCTGGC...GTAAGCATAAGACAATAAGCAACAGAAACAAAGGTTACTTGGCATTATCAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR GCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACAAATTTCCAGTGGATATaGAAGTGGTTTTCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETNFQWI*KWFSIL Trigger: GAGAATGGAAAACCACTTGCATATCCACTGGAAATT...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR GCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACATTATTCTCAGGGGACTaGGGATTTTCAACTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETLFSGD*GFSTLS Trigger: AGATAAAGTTGAAAATCCGCAGTCCCCTGAGAATAA...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CCA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACAATAACATCGTTGATTTaGGGAAGTTGGATGACAATT | + |
|
Preference number: 4 (lower is better) Translates to: THFKFSVMLRDEGAQAETITSLI*GSWMTI Trigger: AATTGTCATCCAACTTCCCCAAATCAACGATGTTAT...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS CCA 90 bp | CCATCCTGTCTGCCTGCTGGCCGGAAACAGCTTCCTTCCACACACTaGCAGAAAGTAACTGGTAAGAAGACAGTCCCTTCCATGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSCLPAGRKQLPSTH*QKVTGKKTVPSMGG Trigger: GCCACCCATGGAAGGGACTGTCTTCTTACCAGTTACTTTCTGCCAGTGTGTGGAAGGAAGCTGTTTCCGGCCAGCAGGCAGACAGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAAGGGCGAATGTAAACTaGGGCCTCCGAAGTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRRANVN*GLRSDC Trigger: GCAGTCACTTCGGAGGCCCAAGTTTACATTCGCCCT...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS TCA 90 bp | CTTCTTGGTCGATCGAGAATGGGAACGGCGACAGCTTCTCCTTGTTaGCTAAGGAATACTGGGCCCCTGGGTCATTCCACTGCACCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLGRSRMGTATASPC*LRNTGPLGHSTAPE Trigger: CTCAGGTGCAGTGGAATGACCCAGGGGCCCAGTATTCCTTAGTCAACAAGGAGAAGCTGTCGCCGTTCCCATTCTCGATCGACCAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS GCA 90 bp | GATGGGGACTGGACCGTCCACTATAGCTCCATGAGAATCCAAGGCTaGAAGCTGCAGATGATGAACCGCTCTTGTTTCTCTGTCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DGDWTVHYSSMRIQG*KLQMMNRSCFSVQG Trigger: GCCCTGGACAGAGAAACAAGAGCGGTTCATCATCTGCAGCTTGCAGCCTTGGATTCTCATGGAGCTATAGTGGACGGTCCAGTCCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS GCA 90 bp | CACGTTGCCCACTCTACTGCCCACAGCAGCATCCTCGCTGACGTTTaGTTGGAATATTCGCTGGGGGAACACAGGCACTTCATTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: HVAHSTAHSSILADV*LEYSLGEHRHFIHI Trigger: GATGTGAATGAAGTGCCTGTGTTCCCCCAGCGAATATTCCAAGCAAACGTCAGCGAGGATGCTGCTGTGGGCAGTAGAGTGGGCAACGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CCA 90 bp | CTGCCCACAGCAGCATCCTCGCTGACGTTTGCTTGGAATATTCGCTaGGGGAACACAGGCACTTCATTCACATCCGTCACAATCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPTAASSLTFAWNIR*GNTGTSFTSVTISS Trigger: CGAGCTGATTGTGACGGATGTGAATGAAGTGCCTGTGTTCCCCCAGCGAATATTCCAAGCAAACGTCAGCGAGGATGCTGCTGTGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CCA 90 bp | TTGCCCACTCTACTGCCCACAGCAGCATCCTCGCTGACGTTTGCTTaGAATATTCGCTGGGGGAACACAGGCACTTCATTCACATCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPTLLPTAASSLTFA*NIRWGNTGTSFTSV Trigger: GACGGATGTGAATGAAGTGCCTGTGTTCCCCCAGCGAATATTCCAAGCAAACGTCAGCGAGGATGCTGCTGTGGGCAGTAGAGTGGGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCCAGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGTTGTGAAACTGGCTGGCTGAGCCTTCATATTTaGACTGGAGAAACGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RARALGSGASSGCCETGWLSLHI*TGETWV Trigger: GACCCACGTTTCTCCAGTCAAAATATGAAGGCTCAG...CCAGCCAGTTTCACAACACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCCAGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGTTGTGAAACTGGCTGGTTCAGTGGCCACCACTaGTACTCGATACACACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RARALGSGASSGCCETGWFSGHH*YSIHTF Trigger: GAAAGTGTGTATCGAGTACAAGTGGTGGCCACTGAA...CCAGCCAGTTTCACAACACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | AGGATCCTGGGATCCTGGGATCTTGTGGTCCTGGGGGTGTTACAGTGCCTGGGAAAACTGGAATATGACTaGACTCGGTTCTTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RILGSWDLVVLGVLQCLGKLEYD*TRFLAF Trigger: GAAGGCCAAGAACCGAGTCAAGTCATATTCCAGTTT...TCCCAGGCACTGTAACACCCCCAGGACCACAAGATCCCAGGATCCCAGGATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | AACCTGTGTCACATGTGGGCAGAGCTCCTGGATGCCTGTGTCCGGCTGGTCCCATCTCCCTGTACAATCTaGTACAGGATTTTAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NLCHMWAELLDACVRLVPSPCTI*YRILEL Trigger: GAGCTCTAAAATCCTGTACAAGATTGTACAGGGAGA...TGGGACCAGCCGGACACAGGCATCCAGGAGCTCTGCCCACATGTGACACAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCTCCTGGATGCCTGTGTCCGGCTGGTCCCAGTTACCTCCAATGTTGGGCATAACATCGTTGATTaGGGGAAGTTGGATGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: AELLDACVRLVPVTSNVGHNIVD*GKLDDN Trigger: ATTGTCATCCAACTTCCCCAAATCAACGATGTTATG...CCCAACATTGGAGGTAACTGGGACCAGCCGGACACAGGCATCCAGGAGCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | AGGATCCTGGGATCCTGGGATCTTGTGGTCCTGGGGGTGTTACAGTGCCTGGGATCTCATCCTTGGCAGTaGCAAAGAAAACATGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RILGSWDLVVLGVLQCLGSHPWQ*QRKHVS Trigger: ACTCACATGTTTTCTTTGCAACTGCCAAGGATGAGA...TCCCAGGCACTGTAACACCCCCAGGACCACAAGATCCCAGGATCCCAGGATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | TCCTATGATCCTGGGAGAGCCAGAGCCCTTGGGAGTGGAGCTTCCTCTGGGTGTGGGAACTTTGGGTGTTaGGTCTACAAGCTTGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: SYDPGRARALGSGASSGCGNFGC*VYKLVF Trigger: AAATACAAGCTTGTAGACCAAACACCCAAAGTTCCC...ACACCCAGAGGAAGCTCCACTCCCAAGGGCTCTGGCTCTCCCAGGATCATAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGACTCAGGATTTTCCGCTaGGAACACAATGCTGCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SEATTQGVYSAPLPAQRGLRIFR*EHNAAN Trigger: GTTAGCAGCATTGTGTTCCAAGCGGAAAATCCTGAG...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGATTCAGTGGCCACCACTaGTACTCGATACACACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRFSGHH*YSIHTF Trigger: GAAAGTGTGTATCGAGTACAAGTGGTGGCCACTGAA...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGAGACTTGACTCGGTTCTaGGCCTTCAAAAATGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SEATTQGVYSAPLPAQRGDLTRF*AFKNGE Trigger: TTCTCCATTTTTGAAGGCCAAGAACCGAGTCAAGTC...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGATTGTCATTGATGTCCTaGACTTCTATGGTGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SEATTQGVYSAPLPAQRGLSLMS*TSMVMG Trigger: CCCCATCACCATAGAAGTCAAGGACATCAATGACAA...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGAGTACTGAGGACTGTCTaGCTTCTTCAAGGACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SEATTQGVYSAPLPAQRGVLRTV*LLQGLF Trigger: AAACAGTCCTTGAAGAAGCAAGACAGTCCTCAGTAC...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | TACCTCCAATGTTGGGGTAGATGTTGTGTCCTCTTCACCTCTGGTCCTATGATCAGGGCGAATGTAAACTaGGGCCTCCGAAGTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: YLQCWGRCCVLFTSGPMIRANVN*GLRSDC Trigger: GCAGTCACTTCGGAGGCCCAAGTTTACATTCGCCCT...GATCATAGGACCAGAGGTGAAGAGGACACAACATCTACCCCAACATTGGAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGATCTCATCCTTGGCAGTaGCAAAGAAAACATGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SEATTQGVYSAPLPAQRGSHPWQ*QRKHVS Trigger: ACTCACATGTTTTCTTTGCAACTGCCAAGGATGAGA...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGAGGGAACTTTGGGTGTTaGGTCTACAAGCTTGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: SEATTQGVYSAPLPAQRGGNFGC*VYKLVF Trigger: AAATACAAGCTTGTAGACCAAACACCCAAAGTTCCC...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGATCTCCCTGTACAATCTaGTACAGGATTTTAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRSPCTI*YRILEL Trigger: GAGCTCTAAAATCCTGTACAAGATTGTACAGGGAGA...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS CCA 90 bp | AGGATTTTAGAGCTCCCTGTAAAGGGCTCATCAGCATCTGTAGCTTaGATGATTAGGATGGTGGATCCGATGGCGGTGTCTTCAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RILELPVKGSSASVA*MIRMVDPMAVSSDR Trigger: TCTGTCTGAAGACACCGCCATCGGATCCACCATCCTAATCATCCAAGCTACAGATGCTGATGAGCCCTTTACAGGGAGCTCTAAAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGACATAACATCGTTGATTaGGGGAAGTTGGATGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRHNIVD*GKLDDN Trigger: ATTGTCATCCAACTTCCCCAAATCAACGATGTTATG...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGAAAGTACATAACATCGTaGATTTGGGGAAGTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SEATTQGVYSAPLPAQRGKYITS*IWGSWM Trigger: CATCCAACTTCCCCAAATCAACGATGTTATGTACTT...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGAGGGGAAATGCTGCTAACTGGTaGAGTTTCAAAATCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SEATTQGVYSAPLPAQRGNAANW*SFKIKR Trigger: CCTCTTGATTTTGAAACTCAACCAGTTAGCAGCATT...TCCCCTCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | CGTCCTCTGAAGCAACAACACAGGGTGTGTACTCAGCTCCTCTTCCTGCCCAGACTAGCATGTGTACCATaGATTTTTGAAACTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPLKQQHRVCTQLLFLPRLACVP*IFETSQ Trigger: CTGGGAAGTTTCAAAAATCAATGGTACACATGCTAG...TCTGGGCAGGAAGAGGAGCTGAGTACACACCCTGTGTTGTTGCTTCAGAGGACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | TGTTGGGGTAGATGTTGTGTCCTCTTCACCTCTGGTCCTATGATCCTGGGATTGTTGTCATTGATGTCCTaGACTTCTATGGTGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CWGRCCVLFTSGPMILGLLSLMS*TSMVMG Trigger: CCCCATCACCATAGAAGTCAAGGACATCAATGACAA...CAATCCCAGGATCATAGGACCAGAGGTGAAGAGGACACAACATCTACCCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTACAGTGCCTGGGAGTCAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAGTTTCCATTCTCATCCTaGGCAGTTGCAAAGAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: VLQCLGVKLLGVVVLAPEFPFSS*AVAKKT Trigger: TGTTTTCTTTGCAACTGCCAAGGATGAGAATGGAAA...CTCCGGAGCCAGTACTACAACACCCAGAAGTTTGACTCCCAGGCACTGTAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTACAGTGCCTGGGAGTCAAACTTCTGGGTGTTGTAGTACTGGCTCCGGAGAATGCTGCTAACTGGTaGAGTTTCAAAATCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLQCLGVKLLGVVVLAPENAANW*SFKIKR Trigger: CCTCTTGATTTTGAAACTCAACCAGTTAGCAGCATT...CTCCGGAGCCAGTACTACAACACCCAGAAGTTTGACTCCCAGGCACTGTAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS CCA 90 bp | TTCGTCCATATCATGGGCCTCAAAGATCCCGATGCTGTTACCCAATaGTTCATTCTCCTGGACTTCAAATACAGTCACTGGAGACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FVHIMGLKDPDAVTQ*FILLDFKYSHWRQT Trigger: TGTCTGTCTCCAGTGACTGTATTTGAAGTCCAGGAGAATGAACCATTGGGTAACAGCATCGGGATCTTTGAGGCCCATGATATGGACGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CCA 90 bp | GAAGGAGGCAAAAGAACTAGCATTGTACTCTATGCCTTTCACCAGTaGCTCAGGATTTTCCGCTTGGAACACAATGCTGCTAACTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EGGKRTSIVLYAFHQ*LRIFRLEHNAANWL Trigger: CAACCAGTTAGCAGCATTGTGTTCCAAGCGGAAAATCCTGAGCCACTGGTGAAAGGCATAGAGTACAATGCTAGTTCTTTTGCCTCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | ATTATACTGAACAGGTGTCAGGGAGGGTGGGGCACTCCTGGTTTATTCCTGATTGACTTGACTCGGTTCTaGGCCTTCAAAAATGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IILNRCQGGWGTPGLFLIDLTRF*AFKNGE Trigger: TTCTCCATTTTTGAAGGCCAAGAACCGAGTCAAGTC...AATCAGGAATAAACCAGGAGTGCCCCACCCTCCCTGACACCTGTTCAGTATAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS CCA 90 bp | GTTGTAGGAAGGATTCTTCACTGGATCCAATTCCTGGGATCCTTCTaGGGTAAGCGATATTGCCCCTGTTTTGCTGTCGATTTGAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VVGRILHWIQFLGSF*GKRYCPCFAVDLKV Trigger: TACTTTCAAATCGACAGCAAAACAGGGGCAATATCGCTTACCCCAGAAGGATCCCAGGAATTGGATCCAGTGAAGAATCCTTCCTACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | TACCTCCAATGTTGGGGTAGATGTTGTGTCCTCTTCACCTCTGGTCCTATGATCAAGTACATAACATCGTaGATTTGGGGAAGTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: YLQCWGRCCVLFTSGPMIKYITS*IWGSWM Trigger: CATCCAACTTCCCCAAATCAACGATGTTATGTACTT...GATCATAGGACCAGAGGTGAAGAGGACACAACATCTACCCCAACATTGGAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACACTCTGTCCAGGGCTCTaGTGTGATACAGAAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: THFKFSVMLRDEGAQAETLCPGL*CDTEVH Trigger: ATGGACTTCTGTATCACACAAGAGCCCTGGACAGAG...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTTGCTTATTGTCTTATGCTTACCTCCTGCCATCTGATTATCTCTAGTGCTGTACTGAGGACTGTCTaGCTTCTTCAAGGACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVAYCLMLTSCHLIISSAVLRTV*LLQGLF Trigger: AAACAGTCCTTGAAGAAGCAAGACAGTCCTCAGTAC...AGCACTAGAGATAATCAGATGGCAGGAGGTAAGCATAAGACAATAAGCAACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTTAAGGGCTTCTAGTTGTTTACCTATGTTCTTCTGGATGTCTTTAAGGCTCAGGATTTTCCGCTaGGAACACAATGCTGCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSLRASSCLPMFFWMSLRLRIFR*EHNAAN Trigger: GTTAGCAGCATTGTGTTCCAAGCGGAAAATCCTGAG...CCTTAAAGACATCCAGAAGAACATAGGTAAACAACTAGAAGCCCTTAAAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACACTGAGCCTTCATATTTaGACTGGAGAAACGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: THFKFSVMLRDEGAQAETLSLHI*TGETWV Trigger: GACCCACGTTTCTCCAGTCAAAATATGAAGGCTCAG...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS TCA 90 bp | GGATCCGATGGCGGTGTCTTCAGACAGAGTCTTGCTTCCATAATTTaGTGTTTCAAAGATGGGAATCTGATCATTGATATCAATAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSDGGVFRQSLASII*CFKDGNLIIDINNV Trigger: AACGTTATTGATATCAATGATCAGATTCCCATCTTTGAAACATCAAATTATGGAAGCAAGACTCTGTCTGAAGACACCGCCATCGGATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS-3UTR CAA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACAAAACTGGAATATGACTaGACTCGGTTCTTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: THFKFSVMLRDEGAQAETKLEYD*TRFLAF Trigger: GAAGGCCAAGAACCGAGTCAAGTCATATTCCAGTTT...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS-3UTR CAA 90 bp | ACACATTTTAAATTCAGTGTAATGCTAAGAGATGAAGGAGCACAGGCTGAAACATTTCCATTCTCATCCTaGGCAGTTGCAAAGAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: THFKFSVMLRDEGAQAETFPFSS*AVAKKT Trigger: TGTTTTCTTTGCAACTGCCAAGGATGAGAATGGAAA...TGTTTCAGCCTGTGCTCCTTCATCTCTTAGCATTACACTGAATTTAAAATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS TCA 72 bp | CGTTGCCCACTCTACTGCCCACAGCAGCATCCTCGCTaGCGTTTGCTTGGAATATTCGCTGGGGGAACACAG | + |
|
Preference number: 6 (lower is better) Translates to: RCPLYCPQQHPR*RLLGIFAGGTQ Trigger: CTGTGTTCCCCCAGCGAATATTCCAAGCAAACGTCAGCGAGGATGCTGCTGTGGGCAGTAGAGTGGGCAACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CCA 72 bp | TCAGTGAATAACTCACAGTCAGGCCTTCAGGATCCCTaGCAGTCACGTTGCCCACTCTACTGCCCACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SVNNSQSGLQDP*QSRCPLYCPQQ Trigger: CTGCTGTGGGCAGTAGAGTGGGCAACGTGACTGCCAGGGATCCTGAAGGCCTGACTGTGAGTTATTCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CAA 90 bp | GTTGCCCACTCTACTGCCCACAGCAGCATCCTCGCTGACGTTTGCTaGGAATATTCGCTGGGGGAACACAGGCACTTCATTCACATCCGT | + |
|
Preference number: 6 (lower is better) Translates to: VAHSTAHSSILADVC*EYSLGEHRHFIHIR Trigger: ACGGATGTGAATGAAGTGCCTGTGTTCCCCCAGCGAATATTCCAAGCAAACGTCAGCGAGGATGCTGCTGTGGGCAGTAGAGTGGGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS TCA 72 bp | CGATCGAGAATGGGAACGGCGACAGCTTCTCCTTGTTaGCTAAGGAATACTGGGCCCCTGGGTCATTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RSRMGTATASPC*LRNTGPLGHST Trigger: AGTGGAATGACCCAGGGGCCCAGTATTCCTTAGTCAACAAGGAGAAGCTGTCGCCGTTCCCATTCTCGATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CCA 72 bp | CTGCCTGCTGGCCGGAAACAGCTTCCTTCCACACACTaGCAGAAAGTAACTGGTAAGAAGACAGTCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPAGRKQLPSTH*QKVTGKKTVPS Trigger: GGAAGGGACTGTCTTCTTACCAGTTACTTTCTGCCAGTGTGTGGAAGGAAGCTGTTTCCGGCCAGCAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS CAA 72 bp | TCGATCGAGAATGGGAACGGCGACAGCTTCTCCTTGTaGACTAAGGAATACTGGGCCCCTGGGTCATTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SIENGNGDSFSL*TKEYWAPGSFH Trigger: GTGGAATGACCCAGGGGCCCAGTATTCCTTAGTCAACAAGGAGAAGCTGTCGCCGTTCCCATTCTCGATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CAA 72 bp | TGGTCGATCGAGAATGGGAACGGCGACAGCTTCTCCTaGTTGACTAAGGAATACTGGGCCCCTGGGTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: WSIENGNGDSFS*LTKEYWAPGSF Trigger: GAATGACCCAGGGGCCCAGTATTCCTTAGTCAACAAGGAGAAGCTGTCGCCGTTCCCATTCTCGATCGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CAA 90 bp | TTTCCTTCTTGGTCGATCGAGAATGGGAACGGCGACAGCTTCTCCTaGTTGACTAAGGAATACTGGGCCCCTGGGTCATTCCACTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: FPSWSIENGNGDSFS*LTKEYWAPGSFHCT Trigger: GGTGCAGTGGAATGACCCAGGGGCCCAGTATTCCTTAGTCAACAAGGAGAAGCTGTCGCCGTTCCCATTCTCGATCGACCAAGAAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CAA 90 bp | TGCCGTAGAACTCAGAGAGGACCCACCTACTTCAGTGGCCACCACTaGTACTCGATACACACTTTCTGTTTCCCTATCCAGCGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CRRTQRGPTYFSGHH*YSIHTFCFPIQRSS Trigger: GCTGCTCCGCTGGATAGGGAAACAGAAAGTGTGTATCGAGTACAAGTGGTGGCCACTGAAGTAGGTGGGTCCTCTCTGAGTTCTACGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CCA 72 bp | GAGCTCCCTGTAAAGGGCTCATCAGCATCTGTAGCTTaGATGATTAGGATGGTGGATCCGATGGCGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ELPVKGSSASVA*MIRMVDPMAVS Trigger: AGACACCGCCATCGGATCCACCATCCTAATCATCCAAGCTACAGATGCTGATGAGCCCTTTACAGGGAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CCA 72 bp | GCAGCATCCTCGCTGACGTTTGCTTGGAATATTCGCTaGGGGAACACAGGCACTTCATTCACATCCGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: AASSLTFAWNIR*GNTGTSFTSVT Trigger: TGTGACGGATGTGAATGAAGTGCCTGTGTTCCCCCAGCGAATATTCCAAGCAAACGTCAGCGAGGATGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS GCA 72 bp | ACCAATGACCAGAAATGTGGTCAGAAGTATACCAACTaGCATGCCCACAGTGGGTATCCCATCCTGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TNDQKCGQKYTN*HAHSGYPILSA Trigger: GGCAGACAGGATGGGATACCCACTGTGGGCATGGCAGTTGGTATACTTCTGACCACATTTCTGGTCATTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029871.12 |
||
| CDS CAA 72 bp | CCGGTCCAAGGCCTGAGTCACATAAATATTTCCTTCTaGGTCGATCGAGAATGGGAACGGCGACAGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PVQGLSHINISF*VDREWERRQLL Trigger: GAGAAGCTGTCGCCGTTCCCATTCTCGATCGACCAAGAAGGAAATATTTATGTGACTCAGGCCTTGGACCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CAA 90 bp | CTCCATGAGAATCCAAGGCTGCAAGCTGCAGATGATGAACCGCTCTaGTTTCTCTGTCCAGGGCTCTTGTGTGATACAGAAGTCCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LHENPRLQAADDEPL*FLCPGLLCDTEVHP Trigger: AGGATGGACTTCTGTATCACACAAGAGCCCTGGACAGAGAAACAAGAGCGGTTCATCATCTGCAGCTTGCAGCCTTGGATTCTCATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CAA 90 bp | CTTTTCCTCCCGGTCCAAGGCCTGAGTCACATAAATATTTCCTTCTaGGTCGATCGAGAATGGGAACGGCGACAGCTTCTCCTTGTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LFLPVQGLSHINISF*VDREWERRQLLLVD Trigger: GTCAACAAGGAGAAGCTGTCGCCGTTCCCATTCTCGATCGACCAAGAAGGAAATATTTATGTGACTCAGGCCTTGGACCGGGAGGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS GCA 72 bp | GTTGTCATTCACATCTGTGAGGACCAGGTGGAAATCTaGCGTAGAACTCAGAGAGGACCCACCTACTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VVIHICEDQVEI*RRTQRGPTYFS Trigger: ACTGAAGTAGGTGGGTCCTCTCTGAGTTCTACGGCAGATTTCCACCTGGTCCTCACAGATGTGAATGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CCA 72 bp | GTCATTGATGTCCTTGACTTCTATGGTGATGGGGACTaGACCGTCCACTATAGCTCCATGAGAATCCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VIDVLDFYGDGD*TVHYSSMRIQG Trigger: GCCTTGGATTCTCATGGAGCTATAGTGGACGGTCCAGTCCCCATCACCATAGAAGTCAAGGACATCAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CAA 72 bp | CCATTGGGAGTAGCCGGATCATCCAGATCTGTAGCATaGACATACATGAAAGGCTTTCCTGGGCGAGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLGVAGSSRSVA*TYMKGFPGREF Trigger: GAACTCTCGCCCAGGAAAGCCTTTCATGTATGTCAATGCTACAGATCTGGATGATCCGGCTACTCCCAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CAA 72 bp | ACTCAGAGAGGACCCACCTACTTCAGTGGCCACCACTaGTACTCGATACACACTTTCTGTTTCCCTATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TQRGPTYFSGHH*YSIHTFCFPIQ Trigger: CTGGATAGGGAAACAGAAAGTGTGTATCGAGTACAAGTGGTGGCCACTGAAGTAGGTGGGTCCTCTCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
||
| CDS CAA 90 bp | AGCTGGAGGGTTGGTCTTAAACTGGAATATGACTTGACTCGGTTCTaGGCCTTCAAAAATGGAGAATGTCATGGGCTTCAGGGGACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SWRVGLKLEYDLTRF*AFKNGECHGLQGTA Trigger: AGCGGTCCCCTGAAGCCCATGACATTCTCCATTTTTGAAGGCCAAGAACCGAGTCAAGTCATATTCCAGTTTAAGACCAACCCTCCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 90 bp | ACTGAGCCTTCATATTTTGACTGGAGAAACGTGGGTCGGTTGTCATaGATGTCCTTGACTTCTATGGTGATGGGGACTGGACCGTCCACT | + |
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Preference number: 6 (lower is better) Translates to: TEPSYFDWRNVGRLS*MSLTSMVMGTGPST Trigger: AGTGGACGGTCCAGTCCCCATCACCATAGAAGTCAAGGACATCAATGACAACCGACCCACGTTTCTCCAGTCAAAATATGAAGGCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS TCA 72 bp | CAAAAATGGAGAATGTCATGGGCTTCAGGGGACCGCTaGACTTCCCTTCTTCGCCATATCCACAGGTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: QKWRMSWASGDR*TSLLRHIHRSN Trigger: ATTTGACCTGTGGATATGGCGAAGAAGGGAAGTTCAGCGGTCCCCTGAAGCCCATGACATTCTCCATTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS TCA 72 bp | TCCATTCTCATCCTTGGCAGTTGCAAAGAAAACATGTaGGTTCTTTTCCTCCCGGTCCAAGGCCTGAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SILILGSCKENM*VLFLPVQGLSH Trigger: GTGACTCAGGCCTTGGACCGGGAGGAAAAGAACTCACATGTTTTCTTTGCAACTGCCAAGGATGAGAATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS TCA 72 bp | GTCGATTTTAAGCCAGCCTCTCATATTGCCTTTCAGTaGATAACTCACAGTCAGGCCTTCAGGATCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VDFKPASHIAFQ*ITHSQAFRIPG Trigger: GCCAGGGATCCTGAAGGCCTGACTGTGAGTTATTCACTGAAAGGCAATATGAGAGGCTGGCTTAAAATCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 72 bp | AATCCAAGGCTGCAAGCTGCAGATGATGAACCGCTCTaGTTTCTCTGTCCAGGGCTCTTGTGTGATACAGAA | + |
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Preference number: 6 (lower is better) Translates to: NPRLQAADDEPL*FLCPGLLCDTE Trigger: TTCTGTATCACACAAGAGCCCTGGACAGAGAAACAAGAGCGGTTCATCATCTGCAGCTTGCAGCCTTGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 90 bp | TCTGTGACAACTTCTAGTCTTCCCTCCGTGTCTCCCTGTACAATCTaGTACAGGATTTTAGAGCTCCCTGTAAAGGGCTCATCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SVTTSSLPSVSPCTI*YRILELPVKGSSAS Trigger: AGATGCTGATGAGCCCTTTACAGGGAGCTCTAAAATCCTGTACAAGATTGTACAGGGAGACACGGAGGGAAGACTAGAAGTTGTCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 72 bp | ACTTCTAGTCTTCCCTCCGTGTCTCCCTGTACAATCTaGTACAGGATTTTAGAGCTCCCTGTAAAGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TSSLPSVSPCTI*YRILELPVKGS Trigger: TGAGCCCTTTACAGGGAGCTCTAAAATCCTGTACAAGATTGTACAGGGAGACACGGAGGGAAGACTAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS GCA 72 bp | TTGACATACATGAAAGGCTTTCCTGGGCGAGAGTTCTaGCTCACTGAGCCTTCATATTTTGACTGGAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: LTYMKGFPGREF*LTEPSYFDWRN Trigger: GTTTCTCCAGTCAAAATATGAAGGCTCAGTGAGGCAGAACTCTCGCCCAGGAAAGCCTTTCATGTATGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 72 bp | TCATATTTTGACTGGAGAAACGTGGGTCGGTTGTCATaGATGTCCTTGACTTCTATGGTGATGGGGACTGGA | + |
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Preference number: 6 (lower is better) Translates to: SYFDWRNVGRLS*MSLTSMVMGTG Trigger: TCCAGTCCCCATCACCATAGAAGTCAAGGACATCAATGACAACCGACCCACGTTTCTCCAGTCAAAATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 72 bp | CTCTATGCCTTTCACCAGTGGCTCAGGATTTTCCGCTaGGAACACAATGCTGCTAACTGGTTGAGTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LYAFHQWLRIFR*EHNAANWLSFK Trigger: TTTGAAACTCAACCAGTTAGCAGCATTGTGTTCCAAGCGGAAAATCCTGAGCCACTGGTGAAAGGCATAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS TCA 72 bp | ACAGCTGGAGGGTTGGTCTTAAACTGGAATATGACTTaGCTCGGTTCTTGGCCTTCAAAAATGGAGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: TAGGLVLNWNMT*LGSWPSKMENV Trigger: GACATTCTCCATTTTTGAAGGCCAAGAACCGAGTCAAGTCATATTCCAGTTTAAGACCAACCCTCCAGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CCA 72 bp | AAAAGAACTAGCATTGTACTCTATGCCTTTCACCAGTaGCTCAGGATTTTCCGCTTGGAACACAATGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: KRTSIVLYAFHQ*LRIFRLEHNAA Trigger: AGCAGCATTGTGTTCCAAGCGGAAAATCCTGAGCCACTGGTGAAAGGCATAGAGTACAATGCTAGTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 72 bp | GTTGGTCTTAAACTGGAATATGACTTGACTCGGTTCTaGGCCTTCAAAAATGGAGAATGTCATGGGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: VGLKLEYDLTRF*AFKNGECHGLQ Trigger: CTGAAGCCCATGACATTCTCCATTTTTGAAGGCCAAGAACCGAGTCAAGTCATATTCCAGTTTAAGACCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 72 bp | AAATCAAGAGGCTTTTTGATCTTGACATATCCTGCATaGGTCGTGGGATCTGTGACAACTTCTAGTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: KSRGFLILTYPA*VVGSVTTSSLP Trigger: GGGAAGACTAGAAGTTGTCACAGATCCCACGACCAATGCAGGATATGTCAAGATCAAAAAGCCTCTTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 90 bp | TTGGGTGTTTGGTCTACAAGCTTGTATTTCAAAATACTGTTGATGTaGTTAGCTTCGTCCATATCATGGGCCTCAAAGATCCCGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGVWSTSLYFKILLM*LASSISWASKIPML Trigger: CAGCATCGGGATCTTTGAGGCCCATGATATGGACGAAGCTAACAACATCAACAGTATTTTGAAATACAAGCTTGTAGACCAAACACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 90 bp | GGAACTTTGGGTGTTTGGTCTACAAGCTTGTATTTCAAAATACTGTaGATGTTGTTAGCTTCGTCCATATCATGGGCCTCAAAGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: GTLGVWSTSLYFKIL*MLLASSISWASKIP Trigger: CGGGATCTTTGAGGCCCATGATATGGACGAAGCTAACAACATCAACAGTATTTTGAAATACAAGCTTGTAGACCAAACACCCAAAGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS TCA 72 bp | AAATCTACGTCAGACACCTCGATACTTAAGTTGTACTaGGGACTGTCTTGCTTCTTCAAGGACTGTTTACTT | + |
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Preference number: 6 (lower is better) Translates to: KSTSDTSILKLY*GLSCFFKDCLL Trigger: AAGTAAACAGTCCTTGAAGAAGCAAGACAGTCCTCAGTACAACTTAAGTATCGAGGTGTCTGACGTAGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS TCA 72 bp | GGCGGTGTCTTCAGACAGAGTCTTGCTTCCATAATTTaGTGTTTCAAAGATGGGAATCTGATCATTGATATC | + |
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Preference number: 6 (lower is better) Translates to: GGVFRQSLASII*CFKDGNLIIDI Trigger: GATATCAATGATCAGATTCCCATCTTTGAAACATCAAATTATGGAAGCAAGACTCTGTCTGAAGACACCGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS GCA 72 bp | ATCAGTCGAGTTTTCTCTAATCTCCACGGGTTCTGGTaGTTTCCAGATATTCTCTCTAATAGAAATATCTAC | + |
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Preference number: 6 (lower is better) Translates to: ISRVFSNLHGFW*FPDILSNRNIY Trigger: GTAGATATTTCTATTAGAGAGAATATCTGGAAAGCACCAGAACCCGTGGAGATTAGAGAAAACTCGACTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 90 bp | TTTCCCTCATATTCACCAATGAGAAAAAGTCCATCTGAGGGAACTTaGGGTGTTTGGTCTACAAGCTTGTATTTCAAAATACTGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: FPSYSPMRKSPSEGT*GVWSTSLYFKILLM Trigger: CATCAACAGTATTTTGAAATACAAGCTTGTAGACCAAACACCCAAAGTTCCCTCAGATGGACTTTTTCTCATTGGTGAATATGAGGGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CCA 72 bp | GACTTCAAATACAGTCACTGGAGACAGACATGTCGGTaGGTTGTCATTAATGTCAATAACTTTCACATAAAT | + |
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Preference number: 6 (lower is better) Translates to: DFKYSHWRQTCR*VVINVNNFHIN Trigger: ATTTATGTGAAAGTTATTGACATTAATGACAACCCACCGACATGTCTGTCTCCAGTGACTGTATTTGAAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 90 bp | TGTTTCAAAGATGGGAATCTGATCATTGATATCAATAACGTTGACTaGAATATAACAGAGAGTCTTGAAATCTACGTCAGACACCTCGAT | + |
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Preference number: 6 (lower is better) Translates to: CFKDGNLIIDINNVD*NITESLEIYVRHLD Trigger: ATCGAGGTGTCTGACGTAGATTTCAAGACTCTCTGTTATATTCAAGTCAACGTTATTGATATCAATGATCAGATTCCCATCTTTGAAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CCA 72 bp | AATAACTTTCACATAAATTTCCAGTGGATATGCAAGTaGTTTTCCATTCTCATCCTTGGCAGTTGCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: NNFHINFQWICK*FSILILGSCKE Trigger: TTCTTTGCAACTGCCAAGGATGAGAATGGAAAACCACTTGCATATCCACTGGAAATTTATGTGAAAGTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 72 bp | TATTCACCAATGAGAAAAAGTCCATCTGAGGGAACTTaGGGTGTTTGGTCTACAAGCTTGTATTTCAAAATA | + |
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Preference number: 6 (lower is better) Translates to: YSPMRKSPSEGT*GVWSTSLYFKI Trigger: TATTTTGAAATACAAGCTTGTAGACCAAACACCCAAAGTTCCCTCAGATGGACTTTTTCTCATTGGTGAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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| CDS CAA 72 bp | GATGGGAATCTGATCATTGATATCAATAACGTTGACTaGAATATAACAGAGAGTCTTGAAATCTACGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DGNLIIDINNVD*NITESLEIYVR Trigger: TCTGACGTAGATTTCAAGACTCTCTGTTATATTCAAGTCAACGTTATTGATATCAATGATCAGATTCCCATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029871.12 ENSMUST00000108303.2 |
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