RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDH16 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031881

Ensembl transcript IDs: ENSMUST00000163783.4, ENSMUST00000211849.2, ENSMUST00000211889.2, ENSMUST00000211903.2, ENSMUST00000212045.2, ENSMUST00000212318.2, ENSMUST00000212324.2, ENSMUST00000212420.2, ENSMUST00000212447.2, ENSMUST00000212662.2, ENSMUST00000212748.2, ENSMUST00000212882.2, ENSMUST00000213033.2

Found 442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTaGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCACACCGC +
Preference number: 1 (lower is better)
Translates to: CILGTGSFLSEFRGS*GQPPSWGCLDHSHR
Trigger: GCGGTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000212045.2
3UTR GCA 90 bp ATGGCCTGGGAGAATTGGGGTACCTGGTCATTCTCATCTTTCACATaGACAGTCACAAGCTGTGGACCCCACAAGATACGTCCATCCTCA +
Preference number: 1 (lower is better)
Translates to: MAWENWGTWSFSSFT*TVTSCGPHKIRPSS
Trigger: TGAGGATGGACGTATCTTGTGGGGTCCACAGCTTGTGACTGTGCATGTGAAAGATGAGAATGACCAGGTACCCCAATTCTCCCAGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
3UTR-3UTR GCA 90 bp AGAATGTGGAAGCGAAGGTCGGAGTTAGCTGTGCCTGGTGCATCCCCATCAGAAGGACCCCAGGCCTGGTaGCCTGGCTCAGCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: RMWKRRSELAVPGASPSEGPQAW*PGSAEL
Trigger: GAGCTCAGCTGAGCCAGGGCACCAGGCCTGGGGTCC...TTCTGATGGGGATGCACCAGGCACAGCTAACTCCGACCTTCGCTTCCACATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
3UTR-3UTR GCA 90 bp CCCCTAGGTGAGGGTCCAGCTGGAACATGTCTGGTAAAGGCTGAGGTGGGGACTGTTAGCTGTGCCTGGTaGATCCCCATCAGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: PLGEGPAGTCLVKAEVGTVSCAW*IPIRSL
Trigger: GAGGCTTCTGATGGGGATGCACCAGGCACAGCTAAC...AGTCCCCACCTCAGCCTTTACCAGACATGTTCCAGCTGGACCCTCACCTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
3UTR-3UTR CCA 90 bp TTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGAGTTCAGAGGGAGCTaGGGCCAACCTCCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LVPSASWVLGPFSVSSEGEFRGS*GQPPSW
Trigger: CCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTC...TCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
3UTR CAA 90 bp GCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTaGGAATCCAATAGCTGGGTGACCTCGTGCACGGCTCCGAACAGC +
Preference number: 2 (lower is better)
Translates to: AVMKQGKGPDSRQLI*ESNSWVTSCTAPNS
Trigger: GCTGTTCGGAGCCGTGCACGAGGTCACCCAGCTATTGGATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212318.2
ENSMUST00000212882.2
3UTR-3UTR TCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTAGGCTTCTGAGGCAGTaGCAGTGGGATAGTCCTAGG +
Preference number: 2 (lower is better)
Translates to: SARSYEAGEGARFPPINLRLLRQ*QWDSPR
Trigger: CCTAGGACTATCCCACTGTCACTGCCTCAGAAGCCT...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
3UTR-3UTR TCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGATGGAGACCAGGCTTCTaGGGCAGTGACAGTGGGATA +
Preference number: 2 (lower is better)
Translates to: ARSYEAGEGARFPPINLGWRPGF*GSDSGI
Trigger: TATCCCACTGTCACTGCCTCAGAAGCCTGGTCTCCA...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212318.2
ENSMUST00000212882.2
3UTR-3UTR GCA 90 bp CCATCAGAAGCCTCAAGGAAGAGGAAGGGGACCCCAGGCCTGGTGCCCTGGCTCTTCTCATCTTTCACATaGACAGTCACAAGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: PSEASRKRKGTPGLVPWLFSSFT*TVTSCG
Trigger: TCCACAGCTTGTGACTGTGCATGTGAAAGATGAGAA...GAGCCAGGGCACCAGGCCTGGGGTCCCCTTCCTCTTCCTTGAGGCTTCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
3UTR-3UTR CCA 90 bp CTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCGGCCAACCTCCCAGCTaGGGCTGCTTGGATCATTCA +
Preference number: 2 (lower is better)
Translates to: LCLGPQCILGTGSFLSEFGQPPS*GCLDHS
Trigger: TGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCC...GAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000212045.2
3UTR-3UTR TCA 90 bp GAGGGTCCAGCTGGAACATGTCTGGTAAAGGCTGAGGTGGGGACTGGCTCAGAACCTCAGACTCCAAGGTaGCCTGTAGTTGGTATTCTG +
Preference number: 2 (lower is better)
Translates to: EGPAGTCLVKAEVGTGSEPQTPR*PVVGIL
Trigger: CAGAATACCAACTACAGGTCACCTTGGAGTCTGAGG...TTCTGAGCCAGTCCCCACCTCAGCCTTTACCAGACATGTTCCAGCTGGACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
3UTR-3UTR CCA 90 bp GAGGGTCCAGCTGGAACATGTCTGGTAAAGGCTGAGGTGGGGACTGGCTCAGAAATGGCCTGGGAGAATTaGGGTACCTGGTCATTCTCA +
Preference number: 2 (lower is better)
Translates to: EGPAGTCLVKAEVGTGSEMAWEN*GTWSFS
Trigger: TGAGAATGACCAGGTACCCCAATTCTCCCAGGCCAT...TTCTGAGCCAGTCCCCACCTCAGCCTTTACCAGACATGTTCCAGCTGGACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
3UTR-3UTR CCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGGGCCAACCTCCCAGCTaGGGCTGCTTGGATCATTCA +
Preference number: 2 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALGQPPS*GCLDHS
Trigger: TGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCC...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000211849.2
ENSMUST00000211889.2
3UTR-3UTR TCA 90 bp TTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTTGGGTCCTTTCTCAGTaGGTTCAGAGGGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LDKELPFGVFPWSSHKVGWVLSQ*VQRELG
Trigger: CCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCA...ACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
3UTR-3UTR CCA 90 bp TTAGCTGTGCCTGGTGCATCCCCATCAGAAGCCTCAAGGAAGAGGAAGGGGACCGAGAATTGGGGTACCTaGTCATTCTCATCTTTCACA +
Preference number: 2 (lower is better)
Translates to: LAVPGASPSEASRKRKGTENWGT*SFSSFT
Trigger: TGTGAAAGATGAGAATGACCAGGTACCCCAATTCTC...GGTCCCCTTCCTCTTCCTTGAGGCTTCTGATGGGGATGCACCAGGCACAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
3UTR-3UTR CCA 90 bp AAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGTCCCCAGTGCATCTTaGGTACTGGGTCCTTTCTCA +
Preference number: 2 (lower is better)
Translates to: KELPFGVFPWSSHKVGAQVPSAS*VLGPFS
Trigger: TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGAC...CTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
3UTR-3UTR CCA 90 bp TCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATGTCCCCAGTGCATCTTaGGTACTGGGTCCTTTCTCA +
Preference number: 2 (lower is better)
Translates to: SLSLYWTKSCHLECSHGHVPSAS*VLGPFS
Trigger: TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGAC...ATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000213033.2
3UTR TCA 72 bp AGCGGCAGATTCCAGCAGTGGGCGTGGCAGAACGATTaGGCGGGAAGCTCCACCCCTGAGCAAGCAGGTTTC +
Preference number: 3 (lower is better)
Translates to: SGRFQQWAWQND*AGSSTPEQAGF
Trigger: GAAACCTGCTTGCTCAGGGGTGGAGCTTCCCGCTCAATCGTTCTGCCACGCCCACTGCTGGAATCTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212318.2
ENSMUST00000212882.2
3UTR TCA 72 bp TCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTaGGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTG +
Preference number: 3 (lower is better)
Translates to: SPVHLGYWVLSQ*VQRELGPTSQL
Trigger: CAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
3UTR CCA 72 bp GGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTaGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCAT +
Preference number: 3 (lower is better)
Translates to: GTGSFLSEFRGS*GQPPSWGCLDH
Trigger: ATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
3UTR TCA 72 bp CACCAGTCGACTCTGGAGACCAGGCTTCTGAGGCAGTaGCAGTGGGATAGTCCTAGGGATGTGGAGACAGGC +
Preference number: 3 (lower is better)
Translates to: HQSTLETRLLRQ*QWDSPRDVETG
Trigger: GCCTGTCTCCACATCCCTAGGACTATCCCACTGTCACTGCCTCAGAAGCCTGGTCTCCAGAGTCGACTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
3UTR TCA 72 bp GGGGACTACACCAGTCGACTCTGGAGACCAGGCTTCTaGGGCAGTGACAGTGGGATAGTCCTAGGGATGTGG +
Preference number: 3 (lower is better)
Translates to: GDYTSRLWRPGF*GSDSGIVLGMW
Trigger: CCACATCCCTAGGACTATCCCACTGTCACTGCCTCAGAAGCCTGGTCTCCAGAGTCGACTGGTGTAGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
3UTR-3UTR CAA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGCCCAGCTGGGGCTGCTaGGATCATTCACACCGCTGC +
Preference number: 3 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQPSWGC*DHSHRC
Trigger: GCAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGG...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000212045.2
3UTR-3UTR CAA 90 bp AAGCGAAGGTCGGAGTTAGCTGTGCCTGGTGCATCCCCATCAGAAGCCTCAAGGGATGGCCTGGGAGAATaGGGGTACCTGGTCATTCTC +
Preference number: 3 (lower is better)
Translates to: KRRSELAVPGASPSEASRDGLGE*GYLVIL
Trigger: GAGAATGACCAGGTACCCCAATTCTCCCAGGCCATC...CCTTGAGGCTTCTGATGGGGATGCACCAGGCACAGCTAACTCCGACCTTCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
3UTR-3UTR CAA 90 bp AAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGGTCCCCAGTGCATCTaGGGTACTGGGTCCTTTCTC +
Preference number: 3 (lower is better)
Translates to: KELPFGVFPWSSHKVGAQGPQCI*GTGSFL
Trigger: GAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC...CTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
3UTR-3UTR CAA 90 bp TCTAGCTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCCCCAGTGCATCTaGGGTACTGGGTCCTTTCTC +
Preference number: 3 (lower is better)
Translates to: SSSLSLYWTKSCHLECSHGPQCI*GTGSFL
Trigger: GAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC...ATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
3UTR-3UTR CAA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGGGCTTTTACTCTGTCTaGGTCCCCAGTGCATCTTGG +
Preference number: 3 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALGFYSV*VPSASW
Trigger: CCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
3UTR-3UTR CAA 90 bp TCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATGGCTTTTACTCTGTCTaGGTCCCCAGTGCATCTTGG +
Preference number: 3 (lower is better)
Translates to: SLSLYWTKSCHLECSHGHGFYSV*VPSASW
Trigger: CCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC...ATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000213033.2
3UTR GCA 72 bp GAGAATTGGGGTACCTGGTCATTCTCATCTTTCACATaGACAGTCACAAGCTGTGGACCCCACAAGATACGT +
Preference number: 3 (lower is better)
Translates to: ENWGTWSFSSFT*TVTSCGPHKIR
Trigger: ACGTATCTTGTGGGGTCCACAGCTTGTGACTGTGCATGTGAAAGATGAGAATGACCAGGTACCCCAATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
3UTR CCA 72 bp TTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATaGTCATCCCATAAAGTAGGTGCTCAGGCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: LLDKELPFGVFP*SSHKVGAQALG
Trigger: CCCCAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000213033.2
3UTR CCA 72 bp CTTTACAGGGTCCAGTCTAGCTCTCTGAGCCTTTATTaGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGT +
Preference number: 3 (lower is better)
Translates to: LYRVQSSSLSLY*TKSCHLECSHG
Trigger: ACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCTAGACTGGACCCTGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211903.2
3UTR GCA 72 bp CAGTCTAGCTCTCTGAGCCTTTATTGGACAAAGAGCTaGCATTTGGAGTGTTCCCATGGTCATCCCATAAAG +
Preference number: 3 (lower is better)
Translates to: QSSSLSLYWTKS*HLECSHGHPIK
Trigger: CTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCTAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp TTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGAGGGGACCCCAGGCCTaGTGCCCTGGCTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FLSEFRGSWGQPPSWGCLRGPQA*CPGSAE
Trigger: CTCAGCTGAGCCAGGGCACCAGGCCTGGGGTCCCCT...CAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp GTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGACCCCAGGCCTGGTaGCCTGGCTCAGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VLGPFSVSSEGAGANLPAGPQAW*PGSAEL
Trigger: GAGCTCAGCTGAGCCAGGGCACCAGGCCTGGGGTCC...AGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp CTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGCTATCGCTGCCAGGGTaGCCAAGAGGACACCCACCG +
Preference number: 4 (lower is better)
Translates to: LGPFSVSSEGAGANLPAGLSLPG*PRGHPP
Trigger: CGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAG...CCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp CCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTGCACCCTGCAGGGACTaGGCTGTGTGTACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PFSVSSEGAGANLPAGAAAPCRD*AVCTSP
Trigger: TGGGGAGGTACACACAGCCCAGTCCCTGCAGGGTGC...AGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp TCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCAGGCGTGGGAATCGTTaGGAGGCTGGAGGCGCCAAT +
Preference number: 4 (lower is better)
Translates to: SFLSEFRGSWGQPPSWGCRRGNR*EAGGAN
Trigger: ATTGGCGCCTCCAGCCTCTCAACGATTCCCACGCCT...GCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp AGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATAGGCGCCAATCCCGCTaGACAGTGGGATTGGGACCG +
Preference number: 4 (lower is better)
Translates to: SEFRGSWGQPPSWGCLDHRRQSR*TVGLGP
Trigger: CGGTCCCAATCCCACTGTGCAGCGGGATTGGCGCCT...ATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp GCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACAGGGGACCCCAGGCCTaGTGCCCTGGCTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ASWVLGPFSVSSEGAGANRGPQA*CPGSAE
Trigger: CTCAGCTGAGCCAGGGCACCAGGCCTGGGGTCCCCT...GTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCAGGGGACCCCAGGCCTaGTGCCCTGGCTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIRGPQA*CPGSAE
Trigger: CTCAGCTGAGCCAGGGCACCAGGCCTGGGGTCCCCT...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp CCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTATGTGTCTCCAGGCTaGGCACCCTGCAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: PFSVSSEGAGANLPAGAAYVSPG*APCRDW
Trigger: CCAGTCCCTGCAGGGTGCCCAGCCTGGAGACACATA...AGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCACACCGCTGCCCCGCTGACAGTTTCGTaGGCATTCCCTTCATGCGAC +
Preference number: 4 (lower is better)
Translates to: GAGANLPAGAAWIIHTAAPLTVS*AFPSCD
Trigger: GTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGG...GGCAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000211889.2
ENSMUST00000212045.2
CDS-3UTR TCA 90 bp CCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTCCTCACATGTGCTGCTaGGGCCACTCTCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: PFSVSSEGAGANLPAGAAPHMCC*GHSLIL
Trigger: CAGGATCAGAGAGTGGCCTCAGCAGCACATGTGAGG...AGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp TTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGCAGCATCAGTGGCCATaGGTGTTGCCACCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FLSEFRGSWGQPPSWGCLQHQWP*VLPPEP
Trigger: GGGCTCTGGTGGCAACACTCATGGCCACTGATGCTG...CAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp TCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTCTCCTGGTCCAACTTaGGGGGAGCAACCACCCTCT +
Preference number: 4 (lower is better)
Translates to: SFLSEFRGSWGQPPSWGCSPGPT*GEQPPS
Trigger: AGAGGGTGGTTGCTCCCCTCAAGTTGGACCAGGAGA...GCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp GTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTAGGCGTGGGAATCGTTaGGAGGCTGGAGGCGCCAAT +
Preference number: 4 (lower is better)
Translates to: VSSEGAGANLPAGAAWIIRRGNR*EAGGAN
Trigger: ATTGGCGCCTCCAGCCTCTCAACGATTCCCACGCCT...AATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212045.2
CDS-3UTR TCA 90 bp TTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGACGCTGTCTGCTGGCTaGTCCAGGTCCTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FLSEFRGSWGQPPSWGCLTLSAG*SRSFLA
Trigger: GGCAAGGAAGGACCTGGATCAGCCAGCAGACAGCGT...CAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp GGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCACACCGCTGCCCTCTACCCAATGCAATaGCAAGGTGAGGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: GAGANLPAGAAWIIHTAALYPMQ*QGEVGV
Trigger: CACGCCTACCTCACCTTGGCATTGCATTGGGTAGAG...GGCAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp AGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCACACCGCTGTGGGCATTCCCTTCATaGGACCCACCTTGCGCATAC +
Preference number: 4 (lower is better)
Translates to: RELGPTSQLGLLGSFTPLWAFPS*DPPCAY
Trigger: GTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCA...CAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000211889.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp CCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTATCCAGGTCCTTCCTTaGCAGGGCCAGGTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: PFSVSSEGAGANLPAGAAIQVLP*QGQVRE
Trigger: TTCACGCACCTGGCCCTGGCAAGGAAGGACCTGGAT...AGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp CTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGTGGTGGCCTGAAGGCTaGTCACCCATGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: LGPFSVSSEGAGANLPAGWWPEG*SPMSLT
Trigger: GGTCAAGGACATGGGTGACCAGCCTTCAGGCCACCA...CCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGCACATCGAAGGGTCCTaGAGGCTGGCTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLSEFRGSWGQPPSWGCLHIEGS*RLALQL
Trigger: CAGCTGGAGAGCCAGCCTCCAGGACCCTTCGATGTG...CAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTCCGGAGTCTGAGCTaGACATGGTCGGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SFLSEFRGSWGQPPSWGCFRSLS*TWSESG
Trigger: GCCAGACTCCGACCATGTCCAGCTCAGACTCCGGAA...GCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGAATCGTTGAGAGGCTaGAGGCGCCAATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: FLSEFRGSWGQPPSWGCLESLRG*RRQSRC
Trigger: GCAGCGGGATTGGCGCCTCCAGCCTCTCAACGATTC...CAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp AGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCACACCGCTGCCGCTGACAGTTTCGTaGGCATTCCCTTCATGCGAC +
Preference number: 4 (lower is better)
Translates to: RELGPTSQLGLLGSFTPLPLTVS*AFPSCD
Trigger: GTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGG...CAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000211889.2
ENSMUST00000212045.2
CDS-3UTR TCA 90 bp AGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATAGATTCTCTGCCAGGTaGACAGGCTCTAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SEFRGSWGQPPSWGCLDHRFSAR*TGSRGA
Trigger: GGCACCCCTAGAGCCTGTTCACCTGGCAGAGAATCT...ATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp CCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTGTTAGCTGTGCCTGGTaGATCCCCATCAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PFSVSSEGAGANLPAGAAVSCAW*IPIRSL
Trigger: GAGGCTTCTGATGGGGATGCACCAGGCACAGCTAAC...AGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp TCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCAGTGGCCATGAGTGTTaGCACCAGAGCCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SFLSEFRGSWGQPPSWGCSGHEC*HQSPRF
Trigger: AAACCTGGGGCTCTGGTGGCAACACTCATGGCCACT...GCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp CTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATTGGGCATTCCCTTCATaGGACCCACCTTGCGCATAC +
Preference number: 4 (lower is better)
Translates to: LSEFRGSWGQPPSWGCLDWAFPS*DPPCAY
Trigger: GTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCA...ATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp TCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCTATCGCTGCCAGGGTaGCCAAGAGGACACCCACCG +
Preference number: 4 (lower is better)
Translates to: SWVLGPFSVSSEGAGANLLSLPG*PRGHPP
Trigger: CGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAG...GAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp GGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCCTATCGCTGCCAGGGTaGCCAAGAGGACACCCACCG +
Preference number: 4 (lower is better)
Translates to: GPQCILGTGSFLSEFRGSLSLPG*PRGHPP
Trigger: CGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAG...GCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp TTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGATCCAGGTCCTTCCTTaGCAGGGCCAGGTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: FLSEFRGSWGQPPSWGCLIQVLP*QGQVRE
Trigger: TTCACGCACCTGGCCCTGGCAAGGAAGGACCTGGAT...CAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp GTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCAGAGGCACGCTGTCTaGTGGCTGATCCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: VSSEGAGANLPAGAAWIIQRHAV*WLIQVL
Trigger: AAGGACCTGGATCAGCCAGCAGACAGCGTGCCTCTG...AATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp GGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCCAGGAGGGAGCCAGCTaGGGTGCTGACTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: GPQCILGTGSFLSEFRGSQEGAS*GADWDA
Trigger: AGCATCCCAGTCAGCACCCCAGCTGGCTCCCTCCTG...GCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp GTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGCCAGAGCCCCTAGGTaGGGGTCCAGCTGGAACATG +
Preference number: 4 (lower is better)
Translates to: VPSASWVLGPFSVSSEGAARAPR*GSSWNM
Trigger: CATGTTCCAGCTGGACCCTCACCTAGGGGCTCTGGC...AGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp CTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATAATGTGGGAATTGGGTaGCCCAGGGGCATCCAAATC +
Preference number: 4 (lower is better)
Translates to: LSEFRGSWGQPPSWGCLDNVGIG*PRGIQI
Trigger: GATTTGGATGCCCCTGGGTCACCCAATTCCCACATT...ATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp TCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGGACCCCAGGCCTGGTaGCCTGGCTCAGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SVLVPSASWVLGPFSVSSGPQAW*PGSAEL
Trigger: GAGCTCAGCTGAGCCAGGGCACCAGGCCTGGGGTCC...TGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp CTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGGCGCCAATCCCGCTaGACAGTGGGATTGGGACCG +
Preference number: 4 (lower is better)
Translates to: LGPQCILGTGSFLSEFRGRRQSR*TVGLGP
Trigger: CGGTCCCAATCCCACTGTGCAGCGGGATTGGCGCCT...CCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp CTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGCTCTACCCAATGCAATaGCAAGGTGAGGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: LGPFSVSSEGAGANLPAGLYPMQ*QGEVGV
Trigger: CACGCCTACCTCACCTTGGCATTGCATTGGGTAGAG...CCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp CTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATTCATGCGACCCACCTTaGGCATACATTGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSEFRGSWGQPPSWGCLDSCDPP*AYIGLP
Trigger: TGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGA...ATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTCTATCGCTGCCAGGGTaGCCAAGAGGACACCCACCG +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLLSLPG*PRGHPP
Trigger: CGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAG...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp CCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTCACAGTCACAAGCTGTaGACCCCACAAGATACGTCC +
Preference number: 4 (lower is better)
Translates to: PFSVSSEGAGANLPAGAAHSHKL*TPQDTS
Trigger: GGACGTATCTTGTGGGGTCCACAGCTTGTGACTGTG...AGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCCACATCGAAGGGTCCTaGAGGCTGGCTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIHIEGS*RLALQL
Trigger: CAGCTGGAGAGCCAGCCTCCAGGACCCTTCGATGTG...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACTGCAGGGCCTGGGCCTaGGCCCACCAGTTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: ASWVLGPFSVSSEGAGANCRAWA*AHQFFY
Trigger: ATAGAAGAACTGGTGGGCCCAGGCCCAGGCCCTGCA...GTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGACAGGAGGGAGCCAGCTaGGGTGCTGACTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGQEGAS*GADWDA
Trigger: AGCATCCCAGTCAGCACCCCAGCTGGCTCCCTCCTG...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAGCACCCTGCAGGGACTaGGCTGTGTGTACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGAPCRD*AVCTSP
Trigger: TGGGGAGGTACACACAGCCCAGTCCCTGCAGGGTGC...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp TCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCTATGTGTCTCCAGGCTaGGCACCCTGCAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: SWVLGPFSVSSEGAGANLYVSPG*APCRDW
Trigger: CCAGTCCCTGCAGGGTGCCCAGCCTGGAGACACATA...GAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGTATGTGTCTCCAGGCTaGGCACCCTGCAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILYVSPG*APCRDW
Trigger: CCAGTCCCTGCAGGGTGCCCAGCCTGGAGACACATA...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCGAATCGTTGAGAGGCTaGAGGCGCCAATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIESLRG*RRQSRC
Trigger: GCAGCGGGATTGGCGCCTCCAGCCTCTCAACGATTC...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp CCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTACCTTGCGCATACATTaGCCTTCCACGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: PFSVSSEGAGANLPAGAATLRIH*PSTLQR
Trigger: TCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGT...AGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp TCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCACCTTGCGCATACATTaGCCTTCCACGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SFLSEFRGSWGQPPSWGCTLRIH*PSTLQR
Trigger: TCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGT...GCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR TCA 90 bp TCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCCCTCAGACTCCAAGGTaGCCTGTAGTTGGTATTCTG +
Preference number: 4 (lower is better)
Translates to: SFLSEFRGSWGQPPSWGCPQTPR*PVVGIL
Trigger: CAGAATACCAACTACAGGTCACCTTGGAGTCTGAGG...GCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp CAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCAATAGCCTGGTGGCCTaGAGGCTGGTCACCCATGTC +
Preference number: 4 (lower is better)
Translates to: QCILGTGSFLSEFRGSWGNSLVA*RLVTHV
Trigger: GACATGGGTGACCAGCCTTCAGGCCACCAGGCTATT...GCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCAGATTCTCTGCCAGGTaGACAGGCTCTAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIRFSAR*TGSRGA
Trigger: GGCACCCCTAGAGCCTGTTCACCTGGCAGAGAATCT...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp AGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCCCTCACATGTGCTGCTaGGGCCACTCTCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: SASWVLGPFSVSSEGAGAPHMCC*GHSLIL
Trigger: CAGGATCAGAGAGTGGCCTCAGCAGCACATGTGAGG...GGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCCCTCACATGTGCTGCTaGGGCCACTCTCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIPHMCC*GHSLIL
Trigger: CAGGATCAGAGAGTGGCCTCAGCAGCACATGTGAGG...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCAGCATCAGTGGCCATaGGTGTTGCCACCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: CSARSYEAGEGARFPPINQHQWP*VLPPEP
Trigger: GGGCTCTGGTGGCAACACTCATGGCCACTGATGCTG...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTAGCCAGCTGGGGTGCTaGCTGGGATGCTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLSQLGC*LGCWSH
Trigger: ATGAGACCAGCATCCCAGTCAGCACCCCAGCTGGCT...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp GTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTTCTGCTCATGGGGTCTaGGGGCTGGATGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VPSASWVLGPFSVSSEGASAHGV*GLDGQQ
Trigger: CTGCTGACCATCCAGCCCTCAGACCCCATGAGCAGA...AGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGATCTGCTCATGGGGTCTaGGGGCTGGATGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGSAHGV*GLDGQQ
Trigger: CTGCTGACCATCCAGCCCTCAGACCCCATGAGCAGA...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATAGGCGTGGGAATCGTTaGGAGGCTGGAGGCGCCAAT +
Preference number: 4 (lower is better)
Translates to: CSARSYEAGEGARFPPINRRGNR*EAGGAN
Trigger: ATTGGCGCCTCCAGCCTCTCAACGATTCCCACGCCT...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp GGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCACGCTGTCTGCTGGCTaGTCCAGGTCCTTCCTATCG +
Preference number: 4 (lower is better)
Translates to: GPQCILGTGSFLSEFRGSTLSAG*SRSFLS
Trigger: CGATAGGAAGGACCTGGATCAGCCAGCAGACAGCGT...GCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211889.2
CDS-3UTR GCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGTCCATCACCACCACCTaGAACTCCAGGGGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILSITTT*NSRGSA
Trigger: CGCAGAACCCCTGGAGTTGCAGGTGGTGGTGATGGA...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp CGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATCAGGCGCCAATCCCGCTaGACAGTGGGATTGGGACCG +
Preference number: 4 (lower is better)
Translates to: RSYEAGEGARFPPINLGIRRQSR*TVGLGP
Trigger: CGGTCCCAATCCCACTGTGCAGCGGGATTGGCGCCT...GATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp TTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCACACTCATGCGACCCACCTTaGGCATACATTGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FRGSWGQPPSWGCLDHSHSCDPP*AYIGLP
Trigger: TGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGA...GTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000211889.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp TTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGACTATCGCTGCCAGGGTaGCCAAGAGGACACCCACCG +
Preference number: 4 (lower is better)
Translates to: LVPSASWVLGPFSVSSEGLSLPG*PRGHPP
Trigger: CGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAG...TCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp AGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATCTTGCCAGGGCCAGGTaGGTGAACACAAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: SEFRGSWGQPPSWGCLDHLARAR*VNTRMR
Trigger: TCTCATTCTTGTGTTCACGCACCTGGCCCTGGCAAG...ATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTGGTGGCCTGAAGGCTaGTCACCCATGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIWWPEG*SPMSLT
Trigger: GGTCAAGGACATGGGTGACCAGCCTTCAGGCCACCA...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCGTTGCAATAGCCTGGTaGCCTGAAGGCTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIVAIAW*PEGWSP
Trigger: GGGTGACCAGCCTTCAGGCCACCAGGCTATTGCAAC...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGATGCAGGGCCTGGGCCTaGGCCCACCAGTTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGCRAWA*AHQFFY
Trigger: ATAGAAGAACTGGTGGGCCCAGGCCCAGGCCCTGCA...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp TTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGACAGGAGGGAGCCAGCTaGGGTGCTGACTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: LVPSASWVLGPFSVSSEGQEGAS*GADWDA
Trigger: AGCATCCCAGTCAGCACCCCAGCTGGCTCCCTCCTG...TCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATGGGGTCTGAGGGCTaGATGGTCAGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGMGSEG*MVSRRE
Trigger: CTCCCTCCTGCTGACCATCCAGCCCTCAGACCCCAT...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp AGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCTACAGAGGTGTCGGCTaGGCCCAGCAGACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SASWVLGPFSVSSEGAGAYRGVG*AQQTES
Trigger: TGACTCTGTCTGCTGGGCCCAGCCGACACCTCTGTA...GGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp AGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCACACCGCTGCACATATGGGTATCATaGTGGACAACCACAGGTACC +
Preference number: 4 (lower is better)
Translates to: RELGPTSQLGLLGSFTPLHIWVS*WTTTGT
Trigger: GGTACCTGTGGTTGTCCACCATGATACCCATATGTG...CAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp AGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATACCTTGCGCATACATTaGCCTTCCACGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SEFRGSWGQPPSWGCLDHTLRIH*PSTLQR
Trigger: TCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGT...ATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp CAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCAGGCACGCTGTCTGCTaGCTGATCCAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QCILGTGSFLSEFRGSWGRHAVC*LIQVLP
Trigger: AGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCT...GCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR TCA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATAATAGCCTGGTGGCCTaGAGGCTGGTCACCCATGTC +
Preference number: 4 (lower is better)
Translates to: CSARSYEAGEGARFPPINNSLVA*RLVTHV
Trigger: GACATGGGTGACCAGCCTTCAGGCCACCAGGCTATT...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp CCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTGTGGGTACACAACTTTaGGATTCTCTGCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: PFSVSSEGAGANLPAGAAVGTQL*DSLPGE
Trigger: TTCACCTGGCAGAGAATCTCAAAGTTGTGTACCCAC...AGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp CAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCTCAACAGCCAGCACCTaGAGCAGGATACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QCILGTGSFLSEFRGSWGSTAST*SRILWP
Trigger: TGGCCAGAGTATCCTGCTTCAGGTGCTGGCTGTTGA...GCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTTCTCCTGGTCCAACTTaGGGGGAGCAACCACCCTCT +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLSPGPT*GEQPPS
Trigger: AGAGGGTGGTTGCTCCCCTCAAGTTGGACCAGGAGA...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp GGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGCCAGCTGGGGTGCTaGCTGGGATGCTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GLLLCLGPQCILGTGSFLSQLGC*LGCWSH
Trigger: ATGAGACCAGCATCCCAGTCAGCACCCCAGCTGGCT...GAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCACAGAGCCAGCCCTCTaGGTCATTGACCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLITEPAL*VIDQGE
Trigger: TTCTCCCTGGTCAATGACTCAGAGGGCTGGCTCTGT...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp TTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAACGCTGTCTGCTGGCTaGTCCAGGTCCTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LVPSASWVLGPFSVSSEGTLSAG*SRSFLA
Trigger: GGCAAGGAAGGACCTGGATCAGCCAGCAGACAGCGT...TCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGAGTGGCCATGAGTGTTaGCACCAGAGCCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILSGHEC*HQSPRF
Trigger: AAACCTGGGGCTCTGGTGGCAACACTCATGGCCACT...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAAGGCGCCAATCCCGCTaGACAGTGGGATTGGGACCG +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSRRQSR*TVGLGP
Trigger: CGGTCCCAATCCCACTGTGCAGCGGGATTGGCGCCT...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCACTATCGCTGCCAGGGTaGCCAAGAGGACACCCACCG +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSLSLPG*PRGHPP
Trigger: CGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAG...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp GTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTCAGAGGCACGCTGTCTaGTGGCTGATCCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: VPSASWVLGPFSVSSEGAQRHAV*WLIQVL
Trigger: AAGGACCTGGATCAGCCAGCAGACAGCGTGCCTCTG...AGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp CCCCTAGGTGAGGGTCCAGCTGGAACATGTCTGGTAAAGGCTGAGGTGGGGACTCCTGATAGGACAATGTaGCCTTCATCTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLGEGPAGTCLVKAEVGTPDRTM*PSSLPR
Trigger: CCTGGGGAGAGATGAAGGCCACATTGTCCTATCAGG...AGTCCCCACCTCAGCCTTTACCAGACATGTTCCAGCTGGACCCTCACCTAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
CDS-3UTR CCA 90 bp TTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGACTGGCTCAGAATGTaGAAGCGAAGGTCGGAGTTA +
Preference number: 4 (lower is better)
Translates to: FLSEFRGSWGQPPSWGCLDWLRM*KRRSEL
Trigger: TAACTCCGACCTTCGCTTCCACATTCTGAGCCAGTC...CAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGTTGCAATAGCCTGGTaGCCTGAAGGCTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: VPSASWVLGPFSVSSEGAVAIAW*PEGWSP
Trigger: GGGTGACCAGCCTTCAGGCCACCAGGCTATTGCAAC...AGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTACAGTTGCAATAGCCTaGTGGCCTGAAGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VLGPFSVSSEGAGANLPATVAIA*WPEGWS
Trigger: TGACCAGCCTTCAGGCCACCAGGCTATTGCAACTGT...AGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCGGCTATTTCAGTTCCTaGGGGGCTGAGCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: QCILGTGSFLSEFRGSWGGYFSS*GAELRD
Trigger: ATCCCTGAGCTCAGCCCCCCAGGAACTGAAATAGCC...GCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGGCTATTTCAGTTCCTaGGGGGCTGAGCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILGYFSS*GAELRD
Trigger: ATCCCTGAGCTCAGCCCCCCAGGAACTGAAATAGCC...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCATACTCTGGCCAGCATaGAGTGGGGCAGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIILWPA*SGAVPS
Trigger: ACTGGGAACTGCCCCACTCCATGCTGGCCAGAGTAT...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp CTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGTTCCGGAGTCTGAGCTaGACATGGTCGGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LGPQCILGTGSFLSEFRGFRSLS*TWSESG
Trigger: GCCAGACTCCGACCATGTCCAGCTCAGACTCCGGAA...CCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGATTCCGGAGTCTGAGCTaGACATGGTCGGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGFRSLS*TWSESG
Trigger: GCCAGACTCCGACCATGTCCAGCTCAGACTCCGGAA...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCTGCAGGGCCTGGGCCTaGGCCCACCAGTTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: GLLLCLGPQCILGTGSFLCRAWA*AHQFFY
Trigger: ATAGAAGAACTGGTGGGCCCAGGCCCAGGCCCTGCA...GAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGCAGGAGGGAGCCAGCTaGGGTGCTGACTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQQEGAS*GADWDA
Trigger: AGCATCCCAGTCAGCACCCCAGCTGGCTCCCTCCTG...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp GGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCATGGGGTCTGAGGGCTaGATGGTCAGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLLLCLGPQCILGTGSFLMGSEG*MVSRRE
Trigger: CTCCCTCCTGCTGACCATCCAGCCCTCAGACCCCAT...GAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATTACAGAGGTGTCGGCTaGGCCCAGCAGACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: CSARSYEAGEGARFPPINYRGVG*AQQTES
Trigger: TGACTCTGTCTGCTGGGCCCAGCCGACACCTCTGTA...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp GGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAATAGCCTGGTGGCCTaGAGGCTGGTCACCCATGTC +
Preference number: 4 (lower is better)
Translates to: GLLLCLGPQCILGTGSFLNSLVA*RLVTHV
Trigger: GACATGGGTGACCAGCCTTCAGGCCACCAGGCTATT...GAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGCAGCATCAGTGGCCATaGGTGTTGCCACCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQQHQWP*VLPPEP
Trigger: GGGCTCTGGTGGCAACACTCATGGCCACTGATGCTG...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
CDS-3UTR TCA 90 bp AGGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGCATCAGTGGCCATaGGTGTTGCCACCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RAFTLSWSPVHLGYWVLSQHQWP*VLPPEP
Trigger: GGGCTCTGGTGGCAACACTCATGGCCACTGATGCTG...AGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
CDS-3UTR TCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGAGCCAGCTGGGGTGCTaGCTGGGATGCTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQSQLGC*LGCWSH
Trigger: ATGAGACCAGCATCCCAGTCAGCACCCCAGCTGGCT...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp GAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTAGCCAGCTGGGGTGCTaGCTGGGATGCTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: ELPFGVFPWSSHKVGAQASQLGC*LGCWSH
Trigger: ATGAGACCAGCATCCCAGTCAGCACCCCAGCTGGCT...AGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp TTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGAGCCAGCTGGGGTGCTaGCTGGGATGCTGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: LLCLGPQCILGTGSFLSESQLGC*LGCWSH
Trigger: ATGAGACCAGCATCCCAGTCAGCACCCCAGCTGGCT...CTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp GAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTCTGCTCATGGGGTCTaGGGGCTGGATGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ELPFGVFPWSSHKVGAQASAHGV*GLDGQQ
Trigger: CTGCTGACCATCCAGCCCTCAGACCCCATGAGCAGA...AGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCATCTGCTCATGGGGTCTaGGGGCTGGATGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSSAHGV*GLDGQQ
Trigger: CTGCTGACCATCCAGCCCTCAGACCCCATGAGCAGA...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp CTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGACACACAATCACTTTaGCCTGGAGTTGCCACATAT +
Preference number: 4 (lower is better)
Translates to: LGPFSVSSEGAGANLPAGDTQSL*PGVATY
Trigger: ATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTC...CCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR TCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGACGCTGTCTGCTGGCTaGTCCAGGTCCTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQTLSAG*SRSFLA
Trigger: GGCAAGGAAGGACCTGGATCAGCCAGCAGACAGCGT...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATGTTAGCTGTGCCTGGTaGATCCCCATCAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: CSARSYEAGEGARFPPINVSCAW*IPIRSL
Trigger: GAGGCTTCTGATGGGGATGCACCAGGCACAGCTAAC...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTTCTCCTCCACTCCAGTaGACCTGGGCAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLSPPLQ*TWAMLC
Trigger: ACACAGCATTGCCCAGGTGCACTGGAGTGGAGGAGA...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp TCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCTCTACCCAATGCAATaGCAAGGTGAGGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: SWVLGPFSVSSEGAGANLLYPMQ*QGEVGV
Trigger: CACGCCTACCTCACCTTGGCATTGCATTGGGTAGAG...GAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCCTCTACCCAATGCAATaGCAAGGTGAGGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLILYPMQ*QGEVGV
Trigger: CACGCCTACCTCACCTTGGCATTGCATTGGGTAGAG...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGTCATGCGACCCACCTTaGGCATACATTGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILSCDPP*AYIGLP
Trigger: TGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGA...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp GGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCCTTGCCAGGGCCAGGTaGGTGAACACAAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: GPQCILGTGSFLSEFRGSLARAR*VNTRMR
Trigger: TCTCATTCTTGTGTTCACGCACCTGGCCCTGGCAAG...GCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp CTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCCAGAGGCACGCTGTCTaGTGGCTGATCCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LCLGPQCILGTGSFLSEFQRHAV*WLIQVL
Trigger: AAGGACCTGGATCAGCCAGCAGACAGCGTGCCTCTG...GAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp CGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATCTGTGTGCAGGCTTTCTaGAGGCTGGGCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RSYEAGEGARFPPINLGICVQAF*RLGLSG
Trigger: ACCACTGAGGCCCAGCCTGCAGAAAGCCTGCACACA...GATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGACAGTTGCAATAGCCTaGTGGCCTGAAGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILTVAIA*WPEGWS
Trigger: TGACCAGCCTTCAGGCCACCAGGCTATTGCAACTGT...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCAGGGATGTTGACTGTTaGGTCATGTGGGGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GPQCILGTGSFLSEFRGSRDVDC*VMWGAD
Trigger: GTCTGCTCCCCACATGACCCAACAGTCAACATCCCT...GCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTGCAGGGCCTGGGCCTaGGCCCACCAGTTCTTCTAT +
Preference number: 4 (lower is better)
Translates to: LLCLGPQCILGTGSFLSECRAWA*AHQFFY
Trigger: ATAGAAGAACTGGTGGGCCCAGGCCCAGGCCCTGCA...CTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGCAGGAGGGAGCCAGCTaGGGTGCTGACTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALQEGAS*GADWDA
Trigger: AGCATCCCAGTCAGCACCCCAGCTGGCTCCCTCCTG...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGATGGGGTCTGAGGGCTaGATGGTCAGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQMGSEG*MVSRRE
Trigger: CTCCCTCCTGCTGACCATCCAGCCCTCAGACCCCAT...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAATGGGGTCTGAGGGCTaGATGGTCAGCAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSMGSEG*MVSRRE
Trigger: CTCCCTCCTGCTGACCATCCAGCCCTCAGACCCCAT...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp GCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACGGCTTATCTGTGTCTTaGGCCTCCACAAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: ASWVLGPFSVSSEGAGANGLSVS*ASTSTV
Trigger: CACAGTGCTTGTGGAGGCCCAAGACACAGATAAGCC...GTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGGCTTATCTGTGTCTTaGGCCTCCACAAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILGLSVS*ASTSTV
Trigger: CACAGTGCTTGTGGAGGCCCAAGACACAGATAAGCC...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp CAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCAGACAGAGTCAATGCTaGGACAGGAGAGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QCILGTGSFLSEFRGSWGRQSQC*DRRGLQ
Trigger: CTGAAGGCCTCTCCTGTCCCAGCATTGACTCTGTCT...GCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCAGACAGAGTCAATGCTaGGACAGGAGAGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIRQSQC*DRRGLQ
Trigger: CTGAAGGCCTCTCCTGTCCCAGCATTGACTCTGTCT...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp TCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAATCGTTGAGAGGCTaGAGGCGCCAATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SVLVPSASWVLGPFSVSSESLRG*RRQSRC
Trigger: GCAGCGGGATTGGCGCCTCCAGCCTCTCAACGATTC...TGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp TTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCACACCACATATGGGTATCATaGTGGACAACCACAGGTACC +
Preference number: 4 (lower is better)
Translates to: FRGSWGQPPSWGCLDHSHHIWVS*WTTTGT
Trigger: GGTACCTGTGGTTGTCCACCATGATACCCATATGTG...GTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp AGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCACACCGCTGACAATCACTTTGACCTaGAGTTGCCACATATGGGTA +
Preference number: 4 (lower is better)
Translates to: RELGPTSQLGLLGSFTPLTITLT*SCHIWV
Trigger: TACCCATATGTGGCAACTCCAGGTCAAAGTGATTGT...CAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTCCGCTGACAGTTTCGTaGGCATTCCCTTCATGCGAC +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLPLTVS*AFPSCD
Trigger: GTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGG...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCGGCCAACCTCCCAGCTaGGGCTGCTTGGATCATTCA +
Preference number: 4 (lower is better)
Translates to: GLLLCLGPQCILGTGSFLGQPPS*GCLDHS
Trigger: TGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCC...GAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp AGGGCATGGTCTAGGCTGGTGCTTCCACTGGGACTAAGAGCCAGAGCCCCTAGGAGGGGTAGTGGTAGCTaGTGGGAGAAAACAGACAAA +
Preference number: 4 (lower is better)
Translates to: RAWSRLVLPLGLRARAPRRGSGS*WEKTDK
Trigger: TTTGTCTGTTTTCTCCCACCAGCTACCACTACCCCT...CCTAGGGGCTCTGGCTCTTAGTCCCAGTGGAAGCACCAGCCTAGACCATGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
CDS-3UTR TCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGAGATTCTCTGCCAGGTaGACAGGCTCTAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQRFSAR*TGSRGA
Trigger: GGCACCCCTAGAGCCTGTTCACCTGGCAGAGAATCT...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATAATGTGGGAATTGGGTaGCCCAGGGGCATCCAAATC +
Preference number: 4 (lower is better)
Translates to: CSARSYEAGEGARFPPINNVGIG*PRGIQI
Trigger: GATTTGGATGCCCCTGGGTCACCCAATTCCCACATT...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp CGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATCTCAACAGCCAGCACCTaGAGCAGGATACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSYEAGEGARFPPINLGISTAST*SRILWP
Trigger: TGGCCAGAGTATCCTGCTTCAGGTGCTGGCTGTTGA...GATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTCTCCTGGTCCAACTTaGGGGGAGCAACCACCCTCT +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQSPGPT*GEQPPS
Trigger: AGAGGGTGGTTGCTCCCCTCAAGTTGGACCAGGAGA...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGTCTGCTCATGGGGTCTaGGGGCTGGATGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALSAHGV*GLDGQQ
Trigger: CTGCTGACCATCCAGCCCTCAGACCCCATGAGCAGA...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp CTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGGGGTAGTGGTAGCTTaGGTATGTAAAAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LGPFSVSSEGAGANLPAGGVVVA*VCKKGN
Trigger: ATTTCCCTTTTTACATACTCAAGCTACCACTACCCC...CCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp CTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATTTCTCATCTTTCACATaGACAGTCACAAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LSEFRGSWGQPPSWGCLDFSSFT*TVTSCG
Trigger: TCCACAGCTTGTGACTGTGCATGTGAAAGATGAGAA...ATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp TTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGTTAGCTGTGCCTGGTaGATCCCCATCAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LVPSASWVLGPFSVSSEGVSCAW*IPIRSL
Trigger: GAGGCTTCTGATGGGGATGCACCAGGCACAGCTAAC...TCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp TTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGATCTCCTCCACTCCAGTaGACCTGGGCAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LVPSASWVLGPFSVSSEGSPPLQ*TWAMLC
Trigger: ACACAGCATTGCCCAGGTGCACTGGAGTGGAGGAGA...TCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp AGGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTTCCATCACCACCACCTaGAACTCCAGGGGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: RAFTLSWSPVHLGYWVLSSITTT*NSRGSA
Trigger: CGCAGAACCCCTGGAGTTGCAGGTGGTGGTGATGGA...AGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp GTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTTTCCCAGTGTTACACTaGCTGAGGTCGGATCTAACT +
Preference number: 4 (lower is better)
Translates to: VLGPFSVSSEGAGANLPAFPVLH*LRSDLT
Trigger: AGTTAGATCCGACCTCAGGCAGTGTAACACTGGGAA...AGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp CGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATCTGGGCATTCCCTTCATaGGACCCACCTTGCGCATAC +
Preference number: 4 (lower is better)
Translates to: RSYEAGEGARFPPINLGIWAFPS*DPPCAY
Trigger: GTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCA...GATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp CTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGCTTGCCAGGGCCAGGTaGGTGAACACAAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: LGPQCILGTGSFLSEFRGLARAR*VNTRMR
Trigger: TCTCATTCTTGTGTTCACGCACCTGGCCCTGGCAAG...CCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp TTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGATCCAGGTCCTTCCTTaGCAGGGCCAGGTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: LLCLGPQCILGTGSFLSEIQVLP*QGQVRE
Trigger: TTCACGCACCTGGCCCTGGCAAGGAAGGACCTGGAT...CTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCACAGAGGCACGCTGTCTaGTGGCTGATCCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSQRHAV*WLIQVL
Trigger: AAGGACCTGGATCAGCCAGCAGACAGCGTGCCTCTG...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAGTTTCTGAGTCCATCTaGAGTCTCTCCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGVSESI*SLSSRP
Trigger: TGGCCTGGAGGAGAGACTGCAGATGGACTCAGAAAC...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS-3UTR GCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGTGTGCAGGCTTTCTaGAGGCTGGGCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQCVQAF*RLGLSG
Trigger: ACCACTGAGGCCCAGCCTGCAGAAAGCCTGCACACA...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTCCTGATAGGACAATGTaGCCTTCATCTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLPDRTM*PSSLPR
Trigger: CCTGGGGAGAGATGAAGGCCACATTGTCCTATCAGG...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCGACTGGCTCAGAATGTaGAAGCGAAGGTCGGAGTTA +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIDWLRM*KRRSEL
Trigger: TAACTCCGACCTTCGCTTCCACATTCTGAGCCAGTC...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp CTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTCACATCGAAGGGTCCTaGAGGCTGGCTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLLCLGPQCILGTGSFLSHIEGS*RLALQL
Trigger: CAGCTGGAGAGCCAGCCTCCAGGACCCTTCGATGTG...ACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGACTGTTGGGTCATGTaGGGAGCAGACAGGTGCATT +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLDCWVM*GADRCI
Trigger: AATGCACCTGTCTGCTCCCCACATGACCCAACAGTC...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATAGGGATGTTGACTGTTaGGTCATGTGGGGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: CSARSYEAGEGARFPPINRDVDC*VMWGAD
Trigger: GTCTGCTCCCCACATGACCCAACAGTCAACATCCCT...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp TTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCCGGAGTCTGAGCTaGACATGGTCGGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLCLGPQCILGTGSFLSEFRSLS*TWSESG
Trigger: GCCAGACTCCGACCATGTCCAGCTCAGACTCCGGAA...CTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCAGCACCCTGCAGGGACTaGGCTGTGTGTACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSEPLLDKELPFGVFPWSAPCRD*AVCTSP
Trigger: TGGGGAGGTACACACAGCCCAGTCCCTGCAGGGTGC...TGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp AGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCGAGGCCTTCAGGAAGTaGATCACAACAGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SASWVLGPFSVSSEGAGAEAFRK*ITTVAE
Trigger: TTCTGCCACTGTTGTGATCCACTTCCTGAAGGCCTC...GGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCGAGGCCTTCAGGAAGTaGATCACAACAGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIEAFRK*ITTVAE
Trigger: TTCTGCCACTGTTGTGATCCACTTCCTGAAGGCCTC...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTACCTTGCGCATACATTaGCCTTCCACGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLTLRIH*PSTLQR
Trigger: TCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGT...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp AGGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTAGGCACGCTGTCTGCTaGCTGATCCAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RAFTLSWSPVHLGYWVLSRHAVC*LIQVLP
Trigger: AGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCT...AGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp TTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGAGGCACGCTGTCTGCTaGCTGATCCAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLCLGPQCILGTGSFLSERHAVC*LIQVLP
Trigger: AGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCT...CTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGCCAGCTGGGGCTGCTTaGATCATTCACACCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALPAGAA*IIHTAA
Trigger: GGCAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGG...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAAGCAGAGAATGGAGCTaGGTGGGGAAGGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGSREWS*VGKVLL
Trigger: AAGGAGAACCTTCCCCACCCAGCTCCATTCTCTGCT...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS-3UTR TCA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCCTCAGACTCCAAGGTaGCCTGTAGTTGGTATTCTG +
Preference number: 4 (lower is better)
Translates to: CSARSYEAGEGARFPPINPQTPR*PVVGIL
Trigger: CAGAATACCAACTACAGGTCACCTTGGAGTCTGAGG...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp CGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATCGGTCACCCATGTCCTTaGCCTGTACCAATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RSYEAGEGARFPPINLGIGHPCP*PVPIAG
Trigger: ACCAGCTATTGGTACAGGTCAAGGACATGGGTGACC...GATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp GGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCATCCAAATCCTCTGCTaGGAGCCTGGCTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: GPQCILGTGSFLSEFRGSIQILC*EPGYFS
Trigger: ACTGAAATAGCCAGGCTCTCAGCAGAGGATTTGGAT...GCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGATCCAAATCCTCTGCTaGGAGCCTGGCTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILIQILC*EPGYFS
Trigger: ACTGAAATAGCCAGGCTCTCAGCAGAGGATTTGGAT...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp TTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTCAACAGCCAGCACCTaGAGCAGGATACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLCLGPQCILGTGSFLSESTAST*SRILWP
Trigger: TGGCCAGAGTATCCTGCTTCAGGTGCTGGCTGTTGA...CTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAACAGAGCCAGCCCTCTaGGTCATTGACCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSTEPAL*VIDQGE
Trigger: TTCTCCCTGGTCAATGACTCAGAGGGCTGGCTCTGT...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp AGCTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTACGCTGTCTGCTGGCTaGTCCAGGTCCTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SSLSLYWTKSCHLECSHGTLSAG*SRSFLA
Trigger: GGCAAGGAAGGACCTGGATCAGCCAGCAGACAGCGT...ACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGACCTTTTGCATGTTaGAGACTGCTGGACAGGTGT +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLGPFAC*RLLDRC
Trigger: ACACCTGTCCAGCAGTCTTCAACATGCAAAAGGTCC...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS-3UTR TCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAGAACATCTGGGCAAGTaGCCTGAAGAATATGGGGAC +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGEHLGK*PEEYGD
Trigger: GTCCCCATATTCTTCAGGTCACTTGCCCAGATGTTC...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS-3UTR GCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCATCTCCTCCACTCCAGTaGACCTGGGCAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSSPPLQ*TWAMLC
Trigger: ACACAGCATTGCCCAGGTGCACTGGAGTGGAGGAGA...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGTTCCCAGTGTTACACTaGCTGAGGTCGGATCTAACT +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILFPVLH*LRSDLT
Trigger: AGTTAGATCCGACCTCAGGCAGTGTAACACTGGGAA...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp TCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAAGTGGCCATGAGTGTTaGCACCAGAGCCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SVLVPSASWVLGPFSVSSSGHEC*HQSPRF
Trigger: AAACCTGGGGCTCTGGTGGCAACACTCATGGCCACT...TGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGACAACAGTGGCAGAAGTaGTCAGTCCTGGCTTATCTG +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGQQWQK*SVLAYL
Trigger: CAGATAAGCCAGGACTGAGCACTTCTGCCACTGTTG...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp CTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCCTCTACCCAATGCAATaGCAAGGTGAGGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: LCLGPQCILGTGSFLSEFLYPMQ*QGEVGV
Trigger: CACGCCTACCTCACCTTGGCATTGCATTGGGTAGAG...GAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp AGGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTTGGGCATTCCCTTCATaGGACCCACCTTGCGCATAC +
Preference number: 4 (lower is better)
Translates to: RAFTLSWSPVHLGYWVLSWAFPS*DPPCAY
Trigger: GTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCA...AGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGGGCATTCCCTTCATaGGACCCACCTTGCGCATAC +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQWAFPS*DPPCAY
Trigger: GTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCA...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGATCCAGGTCCTTCCTTaGCAGGGCCAGGTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALIQVLP*QGQVRE
Trigger: TTCACGCACCTGGCCCTGGCAAGGAAGGACCTGGAT...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGATGGCCTGGGAGAATTaGGGTACCTGGTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: LGPQCILGTGSFLSEFRGMAWEN*GTWSFS
Trigger: TGAGAATGACCAGGTACCCCAATTCTCCCAGGCCAT...CCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTAGCTGTTCTCTACTATaGAGATCTCTACAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: PFSVSSEGAGANLPAGAASCSLL*RSLQLQ
Trigger: TTGCAACTGTAGAGATCTCCATAGTAGAGAACAGCT...AGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGGCTATTTCAGTTCCTaGGGGGCTGAGCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSGYFSS*GAELRD
Trigger: ATCCCTGAGCTCAGCCCCCCAGGAACTGAAATAGCC...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTAGTGGATCACAACAGTaGCAGAAGTGCTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLSGSQQ*QKCSVL
Trigger: CAGGACTGAGCACTTCTGCCACTGTTGTGATCCACT...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp GGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGACAGAGTCAATGCTaGGACAGGAGAGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLLLCLGPQCILGTGSFLRQSQC*DRRGLQ
Trigger: CTGAAGGCCTCTCCTGTCCCAGCATTGACTCTGTCT...GAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGTACAGAGGTGTCGGCTaGGCCCAGCAGACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: FYSVLVPSASWVLGPFSVYRGVG*AQQTES
Trigger: TGACTCTGTCTGCTGGGCCCAGCCGACACCTCTGTA...CACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp AGCTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTGAATCGTTGAGAGGCTaGAGGCGCCAATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SSLSLYWTKSCHLECSHGESLRG*RRQSRC
Trigger: GCAGCGGGATTGGCGCCTCCAGCCTCTCAACGATTC...ACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCCACATATGGGTATCATaGTGGACAACCACAGGTACC +
Preference number: 4 (lower is better)
Translates to: GPQCILGTGSFLSEFRGSHIWVS*WTTTGT
Trigger: GGTACCTGTGGTTGTCCACCATGATACCCATATGTG...GCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGCCGCTGACAGTTTCGTaGGCATTCCCTTCATGCGAC +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQPLTVS*AFPSCD
Trigger: GTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGG...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTAGGCACGCTGTCTGCTaGCTGATCCAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLLCLGPQCILGTGSFLSRHAVC*LIQVLP
Trigger: AGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCT...ACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGAGGCACGCTGTCTGCTaGCTGATCCAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALRHAVC*LIQVLP
Trigger: AGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCT...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CCCCTAGGTGAGGGTCCAGCTGGAACATGTCTGGTAAAGGCTGAGGTGGGGACTGGTAGTGGTAGCTGGTaGGAGAAAACAGACAAAAGA +
Preference number: 4 (lower is better)
Translates to: PLGEGPAGTCLVKAEVGTGSGSW*EKTDKR
Trigger: TCTTTTGTCTGTTTTCTCCCACCAGCTACCACTACC...AGTCCCCACCTCAGCCTTTACCAGACATGTTCCAGCTGGACCCTCACCTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000212748.2
CDS-3UTR TCA 90 bp CTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCCCTCAGACTCCAAGGTaGCCTGTAGTTGGTATTCTG +
Preference number: 4 (lower is better)
Translates to: LCLGPQCILGTGSFLSEFPQTPR*PVVGIL
Trigger: CAGAATACCAACTACAGGTCACCTTGGAGTCTGAGG...GAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp CTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGGCCAGAGCCCCTAGGTaGGGGTCCAGCTGGAACATG +
Preference number: 4 (lower is better)
Translates to: LYWTKSCHLECSHGHPIKARAPR*GSSWNM
Trigger: CATGTTCCAGCTGGACCCTCACCTAGGGGCTCTGGC...CTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATGTGGGTACACAACTTTaGGATTCTCTGCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: CSARSYEAGEGARFPPINVGTQL*DSLPGE
Trigger: TTCACCTGGCAGAGAATCTCAAAGTTGTGTACCCAC...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp GTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTATCCAAATCCTCTGCTaGGAGCCTGGCTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: VPSASWVLGPFSVSSEGAIQILC*EPGYFS
Trigger: ACTGAAATAGCCAGGCTCTCAGCAGAGGATTTGGAT...AGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp AAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGTCTCCTGGTCCAACTTaGGGGGAGCAACCACCCTCT +
Preference number: 4 (lower is better)
Translates to: KELPFGVFPWSSHKVGAQSPGPT*GEQPPS
Trigger: AGAGGGTGGTTGCTCCCCTCAAGTTGGACCAGGAGA...CTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGACAGAGCCAGCCCTCTaGGTCATTGACCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALTEPAL*VIDQGE
Trigger: TTCTCCCTGGTCAATGACTCAGAGGGCTGGCTCTGT...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp TCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATAGGCGTGGGAATCGTTaGGAGGCTGGAGGCGCCAAT +
Preference number: 4 (lower is better)
Translates to: SLSLYWTKSCHLECSHGHRRGNR*EAGGAN
Trigger: ATTGGCGCCTCCAGCCTCTCAACGATTCCCACGCCT...ATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGACACACAATCACTTTaGCCTGGAGTTGCCACATAT +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILDTQSL*PGVATY
Trigger: ATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTC...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR TCA 90 bp TCTAGCTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATACGCTGTCTGCTGGCTaGTCCAGGTCCTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SSSLSLYWTKSCHLECSHTLSAG*SRSFLA
Trigger: GGCAAGGAAGGACCTGGATCAGCCAGCAGACAGCGT...ATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTCTGGGCAAGTGACCTaGAGAATATGGGGACAAAAA +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLISGQVT*RIWGQK
Trigger: TTTTTGTCCCCATATTCTTCAGGTCACTTGCCCAGA...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS-3UTR GCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGAGTGGCCATGAGTGTTaGCACCAGAGCCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALSGHEC*HQSPRF
Trigger: AAACCTGGGGCTCTGGTGGCAACACTCATGGCCACT...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
CDS-3UTR GCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCACTCTACCCAATGCAATaGCAAGGTGAGGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSLYPMQ*QGEVGV
Trigger: CACGCCTACCTCACCTTGGCATTGCATTGGGTAGAG...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp AGGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTTCATGCGACCCACCTTaGGCATACATTGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RAFTLSWSPVHLGYWVLSSCDPP*AYIGLP
Trigger: TGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGA...AGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp AGGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCTTGCCAGGGCCAGGTaGGTGAACACAAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: RAFTLSWSPVHLGYWVLSLARAR*VNTRMR
Trigger: TCTCATTCTTGTGTTCACGCACCTGGCCCTGGCAAG...AGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGGATCATTCACACCGCTaGCTTCAGAGGCACGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALDHSHR*LQRHAV
Trigger: GACAGCGTGCCTCTGAAGGCAGCGGTGTGAATGATC...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp AGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCATGAGAATGAAGCCTTaGGCATACATTGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SASWVLGPFSVSSEGAGAMRMKP*AYIGLP
Trigger: TGGAAGGCCAATGTATGCGCAAGGCTTCATTCTCAT...GGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
CDS-3UTR CCA 90 bp GAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTCCTGATAGGACAATGTaGCCTTCATCTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ELPFGVFPWSSHKVGAQAPDRTM*PSSLPR
Trigger: CCTGGGGAGAGATGAAGGCCACATTGTCCTATCAGG...AGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATCATGGCCTGGGAGAATTaGGGTACCTGGTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: RSYEAGEGARFPPINLGIMAWEN*GTWSFS
Trigger: TGAGAATGACCAGGTACCCCAATTCTCCCAGGCCAT...GATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp CTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCAGTTGCAATAGCCTGGTaGCCTGAAGGCTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: LSEPLLDKELPFGVFPWSVAIAW*PEGWSP
Trigger: GGGTGACCAGCCTTCAGGCCACCAGGCTATTGCAAC...TGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGACAGTTGCAATAGCCTaGTGGCCTGAAGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LLCLGPQCILGTGSFLSETVAIA*WPEGWS
Trigger: TGACCAGCCTTCAGGCCACCAGGCTATTGCAACTGT...CTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAAGGGATGTTGACTGTTaGGTCATGTGGGGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SVLVPSASWVLGPFSVSSRDVDC*VMWGAD
Trigger: GTCTGCTCCCCACATGACCCAACAGTCAACATCCCT...TGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGATACTCTGGCCAGCATaGAGTGGGGCAGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: FYSVLVPSASWVLGPFSVILWPA*SGAVPS
Trigger: ACTGGGAACTGCCCCACTCCATGCTGGCCAGAGTAT...CACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGATACTCTGGCCAGCATaGAGTGGGGCAGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALILWPA*SGAVPS
Trigger: ACTGGGAACTGCCCCACTCCATGCTGGCCAGAGTAT...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTCACATATGGGTATCATaGTGGACAACCACAGGTACC +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLHIWVS*WTTTGT
Trigger: GGTACCTGTGGTTGTCCACCATGATACCCATATGTG...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp AGGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTACCTTGCGCATACATTaGCCTTCCACGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: RAFTLSWSPVHLGYWVLSTLRIH*PSTLQR
Trigger: TCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGT...AGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATCGCAGGTGTGAGGTGTTaGTTTCTGAGTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: RSYEAGEGARFPPINLGIAGVRC*FLSPSA
Trigger: TGCAGATGGACTCAGAAACCAACACCTCACACCTGC...GATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS-3UTR CCA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATAACTTAAGCAGAGAATaGAGCTGGGTGGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: CSARSYEAGEGARFPPINNLSRE*SWVGKV
Trigger: AACCTTCCCCACCCAGCTCCATTCTCTGCTTAAGTT...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS-3UTR TCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGGGTCACCCATGTCCTTaGCCTGTACCAATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALGHPCP*PVPIAG
Trigger: ACCAGCTATTGGTACAGGTCAAGGACATGGGTGACC...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp CTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGGTCACCCATGTCCTTaGCCTGTACCAATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLCLGPQCILGTGSFLSGHPCP*PVPIAG
Trigger: ACCAGCTATTGGTACAGGTCAAGGACATGGGTGACC...ACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp TCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATTCTCCTGGTCCAACTTaGGGGGAGCAACCACCCTCT +
Preference number: 4 (lower is better)
Translates to: SLSLYWTKSCHLECSHGHSPGPT*GEQPPS
Trigger: AGAGGGTGGTTGCTCCCCTCAAGTTGGACCAGGAGA...ATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCGGGGTAGTGGTAGCTTaGGTATGTAAAAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIGVVVA*VCKKGN
Trigger: ATTTCCCTTTTTACATACTCAAGCTACCACTACCCC...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp GAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTCAACAGTGGCAGAAGTaGTCAGTCCTGGCTTATCTG +
Preference number: 4 (lower is better)
Translates to: ELPFGVFPWSSHKVGAQAQQWQK*SVLAYL
Trigger: CAGATAAGCCAGGACTGAGCACTTCTGCCACTGTTG...AGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGTCCAAAAGGACCTTTTaGATGTTGAAGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILSKRTF*MLKTAG
Trigger: TCCAGCAGTCTTCAACATGCAAAAGGTCCTTTTGGA...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS-3UTR CCA 90 bp GGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCGAGAATTGGGGTACCTaGTCATTCTCATCTTTCACA +
Preference number: 4 (lower is better)
Translates to: GPQCILGTGSFLSEFRGSENWGT*SFSSFT
Trigger: TGTGAAAGATGAGAATGACCAGGTACCCCAATTCTC...GCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp AGGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTATGGCCTGGGAGAATTaGGGTACCTGGTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: RAFTLSWSPVHLGYWVLSMAWEN*GTWSFS
Trigger: TGAGAATGACCAGGTACCCCAATTCTCCCAGGCCAT...AGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTGACTGGCTCAGAATGTaGAAGCGAAGGTCGGAGTTA +
Preference number: 4 (lower is better)
Translates to: ELPFGVFPWSSHKVGAQADWLRM*KRRSEL
Trigger: TAACTCCGACCTTCGCTTCCACATTCTGAGCCAGTC...AGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTTGGTGGCCTGAAGGCTaGTCACCCATGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: LDKELPFGVFPWSSHKVGWWPEG*SPMSLT
Trigger: GGTCAAGGACATGGGTGACCAGCCTTCAGGCCACCA...ACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGGACTGTTGGGTCATGTaGGGAGCAGACAGGTGCATT +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALDCWVM*GADRCI
Trigger: AATGCACCTGTCTGCTCCCCACATGACCCAACAGTC...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTTTCCGGAGTCTGAGCTaGACATGGTCGGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LDKELPFGVFPWSSHKVGFRSLS*TWSESG
Trigger: GCCAGACTCCGACCATGTCCAGCTCAGACTCCGGAA...ACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGGGCTTATCTGTGTCTTaGGCCTCCACAAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALGLSVS*ASTSTV
Trigger: CACAGTGCTTGTGGAGGCCCAAGACACAGATAAGCC...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAAGTGGATCACAACAGTaGCAGAAGTGCTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVLVPSASWVLGPFSVSSSGSQQ*QKCSVL
Trigger: CAGGACTGAGCACTTCTGCCACTGTTGTGATCCACT...TGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCACAATCACTTTGACCTaGAGTTGCCACATATGGGTA +
Preference number: 4 (lower is better)
Translates to: QCILGTGSFLSEFRGSWGTITLT*SCHIWV
Trigger: TACCCATATGTGGCAACTCCAGGTCAAAGTGATTGT...GCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCACAATCACTTTGACCTaGAGTTGCCACATATGGGTA +
Preference number: 4 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLITITLT*SCHIWV
Trigger: TACCCATATGTGGCAACTCCAGGTCAAAGTGATTGT...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp CTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCAGCCTTGCGCATACATTaGCCTTCCACGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: LSEPLLDKELPFGVFPWSALRIH*PSTLQR
Trigger: TCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGC...TGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
3UTR CAA 72 bp CTTCACTCCAACAAGGTGAAGGGCTTTTACTCTGTCTaGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LHSNKVKGFYSV*VPSASWVLGPF
Trigger: GAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCCTTCACCTTGTTGGAGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212420.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp TCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGTGGGTACACAACTTTaGGATTCTCTGCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SVLVPSASWVLGPFSVSSVGTQL*DSLPGE
Trigger: TTCACCTGGCAGAGAATCTCAAAGTTGTGTACCCAC...TGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp TCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTTTCTCATCTTTCACATaGACAGTCACAAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SARSYEAGEGARFPPINLFSSFT*TVTSCG
Trigger: TCCACAGCTTGTGACTGTGCATGTGAAAGATGAGAA...AAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR GCA 90 bp CTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTCCATCACCACCACCTaGAACTCCAGGGGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: LYWTKSCHLECSHGHPIKSITTT*NSRGSA
Trigger: CGCAGAACCCCTGGAGTTGCAGGTGGTGGTGATGGA...CTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCATTCCCAGTGTTACACTaGCTGAGGTCGGATCTAACT +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSFPVLH*LRSDLT
Trigger: AGTTAGATCCGACCTCAGGCAGTGTAACACTGGGAA...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp AAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGCTTGCCAGGGCCAGGTaGGTGAACACAAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: KELPFGVFPWSSHKVGAQLARAR*VNTRMR
Trigger: TCTCATTCTTGTGTTCACGCACCTGGCCCTGGCAAG...CTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp CTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGATCCAGGTCCTTCCTTaGCAGGGCCAGGTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: LYWTKSCHLECSHGHPIKIQVLP*QGQVRE
Trigger: TTCACGCACCTGGCCCTGGCAAGGAAGGACCTGGAT...CTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCACCTGATAGGACAATGTaGCCTTCATCTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSEPLLDKELPFGVFPWSPDRTM*PSSLPR
Trigger: CCTGGGGAGAGATGAAGGCCACATTGTCCTATCAGG...TGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGAGAATTGGGGTACCTaGTCATTCTCATCTTTCACA +
Preference number: 4 (lower is better)
Translates to: VPSASWVLGPFSVSSEGAENWGT*SFSSFT
Trigger: TGTGAAAGATGAGAATGACCAGGTACCCCAATTCTC...AGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAGAGAATTGGGGTACCTaGTCATTCTCATCTTTCACA +
Preference number: 4 (lower is better)
Translates to: ARSYEAGEGARFPPINLGENWGT*SFSSFT
Trigger: TGTGAAAGATGAGAATGACCAGGTACCCCAATTCTC...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp AAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGACTGTTGGGTCATGTaGGGAGCAGACAGGTGCATT +
Preference number: 4 (lower is better)
Translates to: KELPFGVFPWSSHKVGAQDCWVM*GADRCI
Trigger: AATGCACCTGTCTGCTCCCCACATGACCCAACAGTC...CTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp TCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCGCTGACAGTTTCGTaGGCATTCCCTTCATGCGAC +
Preference number: 4 (lower is better)
Translates to: SLSLYWTKSCHLECSHGHPLTVS*AFPSCD
Trigger: GTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGG...ATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGAGGCACGCTGTCTGCTaGCTGATCCAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LYWTKSCHLECSHGHPIKRHAVC*LIQVLP
Trigger: AGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCT...CTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR TCA 90 bp TTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTAATGTGGGAATTGGGTaGCCCAGGGGCATCCAAATC +
Preference number: 4 (lower is better)
Translates to: LDKELPFGVFPWSSHKVGNVGIG*PRGIQI
Trigger: GATTTGGATGCCCCTGGGTCACCCAATTCCCACATT...ACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp GGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGACACACAATCACTTTaGCCTGGAGTTGCCACATAT +
Preference number: 4 (lower is better)
Translates to: GFYSVLVPSASWVLGPFSDTQSL*PGVATY
Trigger: ATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTC...TGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR TCA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGGACACACAATCACTTTaGCCTGGAGTTGCCACATAT +
Preference number: 4 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQDTQSL*PGVATY
Trigger: ATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTC...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR GCA 90 bp TTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTTCATGCGACCCACCTTaGGCATACATTGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LDKELPFGVFPWSSHKVGSCDPP*AYIGLP
Trigger: TGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGA...ACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp TCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATTCATGCGACCCACCTTaGGCATACATTGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLSLYWTKSCHLECSHGHSCDPP*AYIGLP
Trigger: TGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGA...ATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp CTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTGGGCATTCCCTTCATaGGACCCACCTTGCGCATAC +
Preference number: 4 (lower is better)
Translates to: LYWTKSCHLECSHGHPIKWAFPS*DPPCAY
Trigger: GTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCA...CTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR CCA 90 bp CTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCAGAGGCCTTCAGGAAGTaGATCACAACAGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LSEPLLDKELPFGVFPWSEAFRK*ITTVAE
Trigger: TTCTGCCACTGTTGTGATCCACTTCCTGAAGGCCTC...TGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTCACATATGGGTATCATaGTGGACAACCACAGGTACC +
Preference number: 4 (lower is better)
Translates to: LLLCLGPQCILGTGSFLSHIWVS*WTTTGT
Trigger: GGTACCTGTGGTTGTCCACCATGATACCCATATGTG...ACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CCA 90 bp TCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATACCTTGCGCATACATTaGCCTTCCACGTTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SLSLYWTKSCHLECSHGHTLRIH*PSTLQR
Trigger: TCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGT...ATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR GCA 90 bp TTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTCAACAGTGGCAGAAGTaGTCAGTCCTGGCTTATCTG +
Preference number: 4 (lower is better)
Translates to: LDKELPFGVFPWSSHKVGQQWQK*SVLAYL
Trigger: CAGATAAGCCAGGACTGAGCACTTCTGCCACTGTTG...ACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp GGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGCTGTTCTCTACTATaGAGATCTCTACAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: GLLLCLGPQCILGTGSFLSCSLL*RSLQLQ
Trigger: TTGCAACTGTAGAGATCTCCATAGTAGAGAACAGCT...GAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATCAGCTGTTCTCTACTATaGAGATCTCTACAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: RSYEAGEGARFPPINLGISCSLL*RSLQLQ
Trigger: TTGCAACTGTAGAGATCTCCATAGTAGAGAACAGCT...GATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CCA 90 bp TCTAGCTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATAGTGGATCACAACAGTaGCAGAAGTGCTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSSLSLYWTKSCHLECSHSGSQQ*QKCSVL
Trigger: CAGGACTGAGCACTTCTGCCACTGTTGTGATCCACT...ATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp AGCTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCACATATGGGTATCATaGTGGACAACCACAGGTACC +
Preference number: 4 (lower is better)
Translates to: SSLSLYWTKSCHLECSHGHIWVS*WTTTGT
Trigger: GGTACCTGTGGTTGTCCACCATGATACCCATATGTG...ACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp AGGGCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTACAATCACTTTGACCTaGAGTTGCCACATATGGGTA +
Preference number: 4 (lower is better)
Translates to: RAFTLSWSPVHLGYWVLSTITLT*SCHIWV
Trigger: TACCCATATGTGGCAACTCCAGGTCAAAGTGATTGT...AGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR TCA 90 bp CTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCAGACACACAATCACTTTaGCCTGGAGTTGCCACATAT +
Preference number: 4 (lower is better)
Translates to: LSEPLLDKELPFGVFPWSDTQSL*PGVATY
Trigger: ATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTC...TGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
CDS-3UTR TCA 90 bp AAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGACACACAATCACTTTaGCCTGGAGTTGCCACATAT +
Preference number: 4 (lower is better)
Translates to: KELPFGVFPWSSHKVGAQDTQSL*PGVATY
Trigger: ATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTC...CTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
CDS-3UTR GCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGTTCTCATCTTTCACATaGACAGTCACAAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALFSSFT*TVTSCG
Trigger: TCCACAGCTTGTGACTGTGCATGTGAAAGATGAGAA...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGACAATCACTTTGACCTaGAGTTGCCACATATGGGTA +
Preference number: 4 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALTITLT*SCHIWV
Trigger: TACCCATATGTGGCAACTCCAGGTCAAAGTGATTGT...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
CDS-3UTR CCA 90 bp AGCTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTACAATCACTTTGACCTaGAGTTGCCACATATGGGTA +
Preference number: 4 (lower is better)
Translates to: SSLSLYWTKSCHLECSHGTITLT*SCHIWV
Trigger: TACCCATATGTGGCAACTCCAGGTCAAAGTGATTGT...ACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211903.2
CDS TCA 90 bp GGTCCTTCCTATCGCTGCCAGGGTGCCCAAGAGGACACCCACCGCTaGCAGTTTCGTGGGCATTCCCTTCATGCGACCCACCTTGCGCAT +
Preference number: 5 (lower is better)
Translates to: GPSYRCQGAQEDTHR*QFRGHSLHATHLAH
Trigger: ATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAGGAAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211889.2
CDS TCA 90 bp GGTAAGCCCTATCGCTGCCAGGGTGCCCAAGAGGACACCCACCGCTaGCAGTTTCGTGGGCATTCCCTTCATGCGACCCACCTTGCGCAT +
Preference number: 5 (lower is better)
Translates to: GKPYRCQGAQEDTHR*QFRGHSLHATHLAH
Trigger: ATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAGGGCTTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212045.2
CDS GCA 90 bp GCGGGGTGTACAGAGGTGTCGGCTGGGCCCAGCAGACAGAGTCAATaGTGGGACAGGAGAGGCCTTCAGGAAGTGGATCACAACAGTGGC +
Preference number: 5 (lower is better)
Translates to: AGCTEVSAGPSRQSQ*WDRRGLQEVDHNSG
Trigger: GCCACTGTTGTGATCCACTTCCTGAAGGCCTCTCCTGTCCCAGCATTGACTCTGTCTGCTGGGCCCAGCCGACACCTCTGTACACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS GCA 90 bp GGCTGCTTGGATCATTCACACCGCTGCCTTCAGAGGCACGCTGTCTaGTGGCTGATCCAGGTCCTTCCTTGCCAGGGCCAGGTGCGTGAA +
Preference number: 5 (lower is better)
Translates to: GCLDHSHRCLQRHAV*WLIQVLPCQGQVRE
Trigger: TTCACGCACCTGGCCCTGGCAAGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCTCTGAAGGCAGCGGTGTGAATGATCCAAGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS CCA 90 bp TCTGTGTCTTGGGCCTCCACAAGCACTGTGTATGTGTCTCCAGGCTaGGCACCCTGCAGGGACTGGGCTGTGTGTACCTCCCCAGACACC +
Preference number: 5 (lower is better)
Translates to: SVSWASTSTVYVSPG*APCRDWAVCTSPDT
Trigger: GGTGTCTGGGGAGGTACACACAGCCCAGTCCCTGCAGGGTGCCCAGCCTGGAGACACATACACAGTGCTTGTGGAGGCCCAAGACACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS-3UTR CAA 90 bp GGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGGATCATTCACACCGCTGCCCATTGGCCTTCCACGTaGCAGCGACACACAATCACT +
Preference number: 5 (lower is better)
Translates to: GAGANLPAGAAWIIHTAAHWPST*QRHTIT
Trigger: AGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATG...GGCAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000212045.2
CDS TCA 90 bp CAAGTGACCTATCGCTGCCAGGGTGCCCAAGAGGACACCCACCGCTaGCAGTTTCGTGGGCATTCCCTTCATGCGACCCACCTTGCGCAT +
Preference number: 5 (lower is better)
Translates to: QVTYRCQGAQEDTHR*QFRGHSLHATHLAH
Trigger: ATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAGGTCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS CCA 90 bp TCGCTGCCAGGGTGCCCAAGAGGACACCCACCGCTGACAGTTTCGTaGGCATTCCCTTCATGCGACCCACCTTGCGCATACATTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SLPGCPRGHPPLTVS*AFPSCDPPCAYIGL
Trigger: AAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
ENSMUST00000213033.2
CDS CCA 90 bp TGCTTGGATCATTCACACCGCTGCCTTCAGAGGCACGCTGTCTGCTaGCTGATCCAGGTCCTTCCTTGCCAGGGCCAGGTGCGTGAACAC +
Preference number: 5 (lower is better)
Translates to: CLDHSHRCLQRHAVC*LIQVLPCQGQVREH
Trigger: GTGTTCACGCACCTGGCCCTGGCAAGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCTCTGAAGGCAGCGGTGTGAATGATCCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS TCA 90 bp AATGAAGCCTATCGCTGCCAGGGTGCCCAAGAGGACACCCACCGCTaGCAGTTTCGTGGGCATTCCCTTCATGCGACCCACCTTGCGCAT +
Preference number: 5 (lower is better)
Translates to: NEAYRCQGAQEDTHR*QFRGHSLHATHLAH
Trigger: ATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAGGCTTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS TCA 90 bp TGGATCATTCACACCGCTGCCTTCAGAGGCACGCTGTCTGCTGGCTaGTCCAGGTCCTTCCTTGCCAGGGCCAGGTGCGTGAACACAAGA +
Preference number: 5 (lower is better)
Translates to: WIIHTAAFRGTLSAG*SRSFLARARCVNTR
Trigger: TCTTGTGTTCACGCACCTGGCCCTGGCAAGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCTCTGAAGGCAGCGGTGTGAATGATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS GCA 90 bp CCAAGAGGACACCCACCGCTGACAGTTTCGTGGGCATTCCCTTCATaGGACCCACCTTGCGCATACATTGGCCTTCCACGTTGCAGCGAC +
Preference number: 5 (lower is better)
Translates to: PRGHPPLTVSWAFPS*DPPCAYIGLPRCSD
Trigger: GTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGGGTGTCCTCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
ENSMUST00000213033.2
CDS GCA 90 bp TGGGATCTCCAGTGCAGGTGTGAGGTGTTGGTTTCTGAGTCCATCTaGAGTCTCTCCTCCAGGCCAGCCAGGATGCCCGCCCTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: WDLQCRCEVLVSESI*SLSSRPARMPALSS
Trigger: AGAAGACAGGGCGGGCATCCTGGCTGGCCTGGAGGAGAGACTGCAGATGGACTCAGAAACCAACACCTCACACCTGCACTGGAGATCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS GCA 90 bp AAGTCTCTTCAAGGGCATGGTCTAGGCTGGTGCTTCCAGGCCTGGTaGCCTGGCTCAGCTGAGCTCTGTAGATGGCCTGGGAGAATTGGG +
Preference number: 5 (lower is better)
Translates to: KSLQGHGLGWCFQAW*PGSAELCRWPGRIG
Trigger: CCCAATTCTCCCAGGCCATCTACAGAGCTCAGCTGAGCCAGGGCACCAGGCCTGGAAGCACCAGCCTAGACCATGCCCTTGAAGAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212447.2
CDS CCA 90 bp ACAAGCACTGTGTATGTGTCTCCAGGCTGGGCACCCTGCAGGGACTaGGCTGTGTGTACCTCCCCAGACACCTCCTTGATACAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: TSTVYVSPGWAPCRD*AVCTSPDTSLIQSQ
Trigger: CTGGCTCTGTATCAAGGAGGTGTCTGGGGAGGTACACACAGCCCAGTCCCTGCAGGGTGCCCAGCCTGGAGACACATACACAGTGCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 90 bp TCACAACTACACCGTAGTCTTGGCGGGGTGTACAGAGGTGTCGGCTaGGCCCAGCAGACAGAGTCAATGCTGGGACAGGAGAGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SQLHRSLGGVYRGVG*AQQTESMLGQERPS
Trigger: TGAAGGCCTCTCCTGTCCCAGCATTGACTCTGTCTGCTGGGCCCAGCCGACACCTCTGTACACCCCGCCAAGACTACGGTGTAGTTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 90 bp CTCCTTGGGATGGCCAATGGGATCTCCAGTGCAGGTGTGAGGTGTTaGTTTCTGAGTCCATCTGCAGTCTCTCCTCCAGGCCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LLGMANGISSAGVRC*FLSPSAVSPPGQPG
Trigger: TCCTGGCTGGCCTGGAGGAGAGACTGCAGATGGACTCAGAAACCAACACCTCACACCTGCACTGGAGATCCCATTGGCCATCCCAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS CCA 90 bp GGTAAGTCTCTTCAAGGGCATGGTCTAGGCTGGTGCTTCCAGGCCTaGTGCCCTGGCTCAGCTGAGCTCTGTAGATGGCCTGGGAGAATT +
Preference number: 5 (lower is better)
Translates to: GKSLQGHGLGWCFQA*CPGSAELCRWPGRI
Trigger: AATTCTCCCAGGCCATCTACAGAGCTCAGCTGAGCCAGGGCACCAGGCCTGGAAGCACCAGCCTAGACCATGCCCTTGAAGAGACTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212447.2
CDS-3UTR CAA 90 bp TTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTGTATACAATGTGGGAATaGGGTGACCCAGGGGCATCC +
Preference number: 5 (lower is better)
Translates to: FLSEFRGSWGQPPSWGCLYTMWE*GDPGAS
Trigger: GGATGCCCCTGGGTCACCCAATTCCCACATTGTATA...CAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CAA 90 bp CCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGCACCTTGCGCATACATaGGCCTTCCACGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: PQCILGTGSFLSEFRGSWHLAHT*AFHVAA
Trigger: CGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTG...CCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CAA 90 bp CGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATCGCCCGCCCTGTCTTCTaGCCTGGGCTTGGCTCCTNN +
Preference number: 5 (lower is better)
Translates to: RSYEAGEGARFPPINLGIARPVF*PGLGSX
Trigger: NNAGGAGCCAAGCCCAGGCAAGAAGACAGGGCGGGC...GATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS TCA 90 bp CTCCACTCCAGTGCACCTGGGCAATGCTGTGTGGGTACACAACTTTaGGATTCTCTGCCAGGTGAACAGGCTCTAGGGGTGCCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: LHSSAPGQCCVGTQL*DSLPGEQALGVPSC
Trigger: ACAGCTGGGCACCCCTAGAGCCTGTTCACCTGGCAGAGAATCTCAAAGTTGTGTACCCACACAGCATTGCCCAGGTGCACTGGAGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212447.2
ENSMUST00000212882.2
CDS TCA 90 bp TGTGTGTACCTCCCCAGACACCTCCTTGATACAGAGCCAGCCCTCTaGGTCATTGACCAGGGAGAACCTGAGGGTTCTGCTCATGGGGTC +
Preference number: 5 (lower is better)
Translates to: CVYLPRHLLDTEPAL*VIDQGEPEGSAHGV
Trigger: GACCCCATGAGCAGAACCCTCAGGTTCTCCCTGGTCAATGACTCAGAGGGCTGGCTCTGTATCAAGGAGGTGTCTGGGGAGGTACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS GCA 90 bp CCACCGCTGACAGTTTCGTGGGCATTCCCTTCATGCGACCCACCTTaGGCATACATTGGCCTTCCACGTTGCAGCGACACACAATCACTG +
Preference number: 5 (lower is better)
Translates to: PPLTVSWAFPSCDPP*AYIGLPRCSDTQSL
Trigger: CAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS-3UTR CAA 90 bp GCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACGATGGCCTGGGAGAATaGGGGTACCTGGTCATTCTC +
Preference number: 5 (lower is better)
Translates to: ASWVLGPFSVSSEGAGANDGLGE*GYLVIL
Trigger: GAGAATGACCAGGTACCCCAATTCTCCCAGGCCATC...GTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CAA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGATGGCCTGGGAGAATaGGGGTACCTGGTCATTCTC +
Preference number: 5 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILDGLGE*GYLVIL
Trigger: GAGAATGACCAGGTACCCCAATTCTCCCAGGCCATC...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CAA 90 bp GCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCAACGGCCCAATCTGGGAATaGATGAACTCAGGGGCATGG +
Preference number: 5 (lower is better)
Translates to: ASWVLGPFSVSSEGAGANGPIWE*MNSGAW
Trigger: CCATGCCCCTGAGTTCATCAATTCCCAGATTGGGCC...GTTGGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CAA 90 bp GTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCGGCCCAATCTGGGAATaGATGAACTCAGGGGCATGG +
Preference number: 5 (lower is better)
Translates to: VPHAVMKQGKGPDSRQLIGPIWE*MNSGAW
Trigger: CCATGCCCCTGAGTTCATCAATTCCCAGATTGGGCC...GATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CAA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCACCTTGCGCATACATaGGCCTTCCACGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: CSARSYEAGEGARFPPINHLAHT*AFHVAA
Trigger: CGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTG...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS TCA 90 bp CAAAGCTGTAGGGACCATTCCTGTTGGCTAGGTCAGGGTCCTCACTaGCCCCACTCACAACTACACCGTAGTCTTGGCGGGGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: QSCRDHSCWLGQGPH*PHSQLHRSLGGVYR
Trigger: TCTGTACACCCCGCCAAGACTACGGTGTAGTTGTGAGTGGGGTCAGTGAGGACCCTGACCTAGCCAACAGGAATGGTCCCTACAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS GCA 90 bp GACAACCACAGGTACCATGTATTCACCAGGCTCTACCCAATGCAATaGCAAGGTGAGGTAGGCGTGGGAATCGTTGAGAGGCTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: DNHRYHVFTRLYPMQ*QGEVGVGIVERLEA
Trigger: CGCCTCCAGCCTCTCAACGATTCCCACGCCTACCTCACCTTGGCATTGCATTGGGTAGAGCCTGGTGAATACATGGTACCTGTGGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS GCA 90 bp CCACCGCTGACAGTTTCGTGGGCATTCCCTTCATGCGACCCACCTTaGGCATACATTGGCCTTCCACGTTGCAGCGACACACAATCACTT +
Preference number: 5 (lower is better)
Translates to: PPLTVSWAFPSCDPP*AYIGLPRCSDTQSL
Trigger: AAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS GCA 90 bp TGCCTTCAGAGGCACGCTGTCTGCTGGCTGATCCAGGTCCTTCCTTaGCAGGGCCAGGTGCGTGAACACAAGAATGAGAATGAAGCCTAT +
Preference number: 5 (lower is better)
Translates to: CLQRHAVCWLIQVLP*QGQVREHKNENEAY
Trigger: ATAGGCTTCATTCTCATTCTTGTGTTCACGCACCTGGCCCTGGCAAGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCTCTGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS GCA 90 bp TTCCCTTCATGCGACCCACCTTGCGCATACATTGGCCTTCCACGTTaGAGCGACACACAATCACTGAGGGTTCTGCTCATGGGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: FPSCDPPCAYIGLPR*SDTQSLRVLLMGSE
Trigger: CTCAGACCCCATGAGCAGAACCCTCAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS GCA 90 bp TTCCTAAATGTGAACATCTGGGCAAGTGACCTATCGCTGCCAGGGTaGCCAAGAGGACACCCACCGCTGACAGTTTCGTGGGCATTCCCT +
Preference number: 5 (lower is better)
Translates to: FLNVNIWASDLSLPG*PRGHPPLTVSWAFP
Trigger: AGGGAATGCCCACGAAACTGTCAGCGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATAGGTCACTTGCCCAGATGTTCACATTTAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS CCA 90 bp ATCACAACAGTGGCAGAAGTGCTCAGTCCTGGCTTATCTGTGTCTTaGGCCTCCACAAGCACTGTGTATGTGTCTCCAGGCTGGGCACCC +
Preference number: 5 (lower is better)
Translates to: ITTVAEVLSPGLSVS*ASTSTVYVSPGWAP
Trigger: GGGTGCCCAGCCTGGAGACACATACACAGTGCTTGTGGAGGCCCAAGACACAGATAAGCCAGGACTGAGCACTTCTGCCACTGTTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS-3UTR CAA 90 bp AGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCTGGTCACCCATGTCCTaGACCTGTACCAATAGCTGG +
Preference number: 5 (lower is better)
Translates to: SASWVLGPFSVSSEGAGAWSPMS*TCTNSW
Trigger: CCAGCTATTGGTACAGGTCAAGGACATGGGTGACCA...GGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CAA 90 bp GGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGTCACCCATGTCCTaGACCTGTACCAATAGCTGG +
Preference number: 5 (lower is better)
Translates to: GPQCILGTGSFLSEFRGSWSPMS*TCTNSW
Trigger: CCAGCTATTGGTACAGGTCAAGGACATGGGTGACCA...GCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CAA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTGAGCTCAGGGATGTaGACTGTTGGGTCATGTGGG +
Preference number: 5 (lower is better)
Translates to: CSARSYEAGEGARFPPINLSSGM*TVGSCG
Trigger: CCCACATGACCCAACAGTCAACATCCCTGAGCTCAG...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CAA 90 bp AGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCTATACAATGTGGGAATaGGGTGACCCAGGGGCATCC +
Preference number: 5 (lower is better)
Translates to: SASWVLGPFSVSSEGAGAYTMWE*GDPGAS
Trigger: GGATGCCCCTGGGTCACCCAATTCCCACATTGTATA...GGCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CAA 90 bp CAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGCTGGGGCCATTGGCCTTCCACGTaGCAGCGACACACAATCACT +
Preference number: 5 (lower is better)
Translates to: QCILGTGSFLSEFRGSWGHWPST*QRHTIT
Trigger: AGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATG...GCCCCAGCTCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CAA 90 bp CTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCCACCTTGCGCATACATaGGCCTTCCACGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: LCLGPQCILGTGSFLSEFHLAHT*AFHVAA
Trigger: CGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTG...GAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CAA 90 bp CTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTCCCAGCTGGGGCTGCTaGGATCATTCACACCGCTGC +
Preference number: 5 (lower is better)
Translates to: LLLCLGPQCILGTGSFLSPSWGC*DHSHRC
Trigger: GCAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGG...ACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS-3UTR CAA 90 bp GCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGATGGGGAAGGTTCTCCTaGGGATGGCCAATGGGATCT +
Preference number: 5 (lower is better)
Translates to: ARSYEAGEGARFPPINLGWGRFS*GWPMGS
Trigger: AGATCCCATTGGCCATCCCAAGGAGAACCTTCCCCA...TCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS CCA 90 bp CCCCACAAGATACGTCCATCCTCAGACTCCAAGGTGACCTGTAGTTaGTATTCTGCTTTCTCTTCCCGGTCCAGGGTCCTTGTCGCCACT +
Preference number: 5 (lower is better)
Translates to: PHKIRPSSDSKVTCS*YSAFSSRSRVLVAT
Trigger: AGTGGCGACAAGGACCCTGGACCGGGAAGAGAAAGCAGAATACCAACTACAGGTCACCTTGGAGTCTGAGGATGGACGTATCTTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212447.2
ENSMUST00000212662.2
ENSMUST00000212882.2
CDS CCA 90 bp CCTCCTCAGGCTCAGGGCTCAACAACTGATATACAATGTGGGAATTaGGTGACCCAGGGGCATCCAAATCCTCTGCTGAGAGCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: PPQAQGSTTDIQCGN*VTQGHPNPLLRAWL
Trigger: TAGCCAGGCTCTCAGCAGAGGATTTGGATGCCCCTGGGTCACCCAATTCCCACATTGTATATCAGTTGTTGAGCCCTGAGCCTGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 90 bp TCAATGCTGGGACAGGAGAGGCCTTCAGGAAGTGGATCACAACAGTaGCAGAAGTGCTCAGTCCTGGCTTATCTGTGTCTTGGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SMLGQERPSGSGSQQ*QKCSVLAYLCLGPP
Trigger: TGGAGGCCCAAGACACAGATAAGCCAGGACTGAGCACTTCTGCCACTGTTGTGATCCACTTCCTGAAGGCCTCTCCTGTCCCAGCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 90 bp CCAGCAGACAGAGTCAATGCTGGGACAGGAGAGGCCTTCAGGAAGTaGATCACAACAGTGGCAGAAGTGCTCAGTCCTGGCTTATCTGTG +
Preference number: 5 (lower is better)
Translates to: PADRVNAGTGEAFRK*ITTVAEVLSPGLSV
Trigger: CACAGATAAGCCAGGACTGAGCACTTCTGCCACTGTTGTGATCCACTTCCTGAAGGCCTCTCCTGTCCCAGCATTGACTCTGTCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 90 bp AGTTTCGTGGGCATTCCCTTCATGCGACCCACCTTGCGCATACATTaGCCTTCCACGTTGCAGCGACACACAATCACTGAGGGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SFVGIPFMRPTLRIH*PSTLQRHTITEGSA
Trigger: AGCAGAACCCTCAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS-3UTR CAA 90 bp TTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGAGGCCCAATCTGGGAATaGATGAACTCAGGGGCATGG +
Preference number: 5 (lower is better)
Translates to: LVPSASWVLGPFSVSSEGGPIWE*MNSGAW
Trigger: CCATGCCCCTGAGTTCATCAATTCCCAGATTGGGCC...TCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CAA 90 bp TGTTCCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCATTGGCCTTCCACGTaGCAGCGACACACAATCACT +
Preference number: 5 (lower is better)
Translates to: CSARSYEAGEGARFPPINHWPST*QRHTIT
Trigger: AGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATG...ATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CAA 90 bp GCTTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGCACCTTGCGCATACATaGGCCTTCCACGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: AFTLSWSPVHLGYWVLSQHLAHT*AFHVAA
Trigger: CGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTG...CTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS CCA 90 bp AGTTTCGTGGGCATTCCCTTCATGCGACCCACCTTGCGCATACATTaGCCTTCCACGTTGCAGCGACACACAATCACTTTGACCTGGAGT +
Preference number: 5 (lower is better)
Translates to: SFVGIPFMRPTLRIH*PSTLQRHTITLTWS
Trigger: ACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS-3UTR CAA 90 bp CGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGGAATCTATACAATGTGGGAATaGGGTGACCCAGGGGCATCC +
Preference number: 5 (lower is better)
Translates to: RSYEAGEGARFPPINLGIYTMWE*GDPGAS
Trigger: GGATGCCCCTGGGTCACCCAATTCCCACATTGTATA...GATTCCAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS-3UTR CAA 90 bp TTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGTTCAGAGGGACATTGGCCTTCCACGTaGCAGCGACACACAATCACT +
Preference number: 5 (lower is better)
Translates to: LVPSASWVLGPFSVSSEGHWPST*QRHTIT
Trigger: AGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATG...TCCCTCTGAACTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
CDS-3UTR CAA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGCACCTTGCGCATACATaGGCCTTCCACGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALHLAHT*AFHVAA
Trigger: CGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTG...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR CAA 90 bp TTTTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGCCTTGCGCATACATaGGCCTTCCACGTTGCAGCG +
Preference number: 5 (lower is better)
Translates to: FYSVLVPSASWVLGPFSVSLAHT*AFHVAA
Trigger: CGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGCT...CACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
CDS TCA 90 bp TGGGCAATGCTGTGTGGGTACACAACTTTGAGATTCTCTGCCAGGTaGACAGGCTCTAGGGGTGCCCAGCTGTTCTCTACTATGGAGATC +
Preference number: 5 (lower is better)
Translates to: WAMLCGYTTLRFSAR*TGSRGAQLFSTMEI
Trigger: GATCTCCATAGTAGAGAACAGCTGGGCACCCCTAGAGCCTGTTCACCTGGCAGAGAATCTCAAAGTTGTGTACCCACACAGCATTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212447.2
ENSMUST00000212882.2
CDS GCA 90 bp TTCTTCTATGTTACTCACGACCACCACCACCTTGTGATCAGGAGCTaGCTCATAGCTGAGGTTCTTCCGGAGTCTGAGCTGGACATGGTC +
Preference number: 5 (lower is better)
Translates to: FFYVTHDHHHLVIRS*LIAEVLPESELDMV
Trigger: GACCATGTCCAGCTCAGACTCCGGAAGAACCTCAGCTATGAGGCAGCTCCTGATCACAAGGTGGTGGTGGTCGTGAGTAACATAGAAGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000212882.2
ENSMUST00000213033.2
CDS GCA 90 bp CTTGCCAGGGCCAGGTGCGTGAACACAAGAATGAGAATGAAGCCTTaGGCATACATTGGCCTTCCACGTTGCAGCGACACACAATCACTT +
Preference number: 5 (lower is better)
Translates to: LARARCVNTRMRMKP*AYIGLPRCSDTQSL
Trigger: AAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGCTTCATTCTCATTCTTGTGTTCACGCACCTGGCCCTGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
CDS CCA 90 bp GGGGACATGCCTGTGATAATGTCTTCATCCAAGGTGACCTGTAGTTaGTATTCTGCTTTCTCTTCCCGGTCCAGGGTCCTTGTCGCCACT +
Preference number: 5 (lower is better)
Translates to: GDMPVIMSSSKVTCS*YSAFSSRSRVLVAT
Trigger: AGTGGCGACAAGGACCCTGGACCGGGAAGAGAAAGCAGAATACCAACTACAGGTCACCTTGGATGAAGACATTATCACAGGCATGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212324.2
CDS-3UTR CAA 90 bp TTACTCTGTCTTGGTCCCCAGTGCATCTTGGGTACTGGGTCCTTTCTCAGTGAGCATTGGCCTTCCACGTaGCAGCGACACACAATCACT +
Preference number: 5 (lower is better)
Translates to: LLCLGPQCILGTGSFLSEHWPST*QRHTIT
Trigger: AGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATG...CTCACTGAGAAAGGACCCAGTACCCAAGATGCACTGGGGACCAAGACAGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000213033.2
CDS-3UTR CAA 90 bp CCGCACGCAGTTATGAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAATCTTGTTCCAAAAGGACCTTTaGCATGTTGAAGACTGCTGG +
Preference number: 5 (lower is better)
Translates to: PHAVMKQGKGPDSRQLILFQKDL*HVEDCW
Trigger: CCAGCAGTCTTCAACATGCAAAAGGTCCTTTTGGAA...CAAGATTAATTGGCGGGAATCGGGCCCCTTCCCCTGCTTCATAACTGCGTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS TCA 90 bp TGCGCATACATTGGCCTTCCACGTTGCAGCGACACACAATCACTTTaGCCTGGAGTTGCCACATATGGGTATCATGGTGGACAACCACAG +
Preference number: 5 (lower is better)
Translates to: CAYIGLPRCSDTQSL*PGVATYGYHGGQPQ
Trigger: CTGTGGTTGTCCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS GCA 90 bp GACAACCACAGGTACCATGTATTCACCAGGCTCTACCCAATGCAATaGCAAGGTGAGGTAGGCGTGGGAATCTGTTGGGTTGCAGAAGNN +
Preference number: 5 (lower is better)
Translates to: DNHRYHVFTRLYPMQ*QGEVGVGICWVAEX
Trigger: NNCTTCTGCAACCCAACAGATTCCCACGCCTACCTCACCTTGGCATTGCATTGGGTAGAGCCTGGTGAATACATGGTACCTGTGGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211889.2
CDS CCA 90 bp GGAAGAGTTACAGGCCCAATCTGGGAATTGATGAACTCAGGGGCATaGTTGTTGACGTCTGTCACCATGACTGTCACCTCACATGTGCTG +
Preference number: 5 (lower is better)
Translates to: GRVTGPIWELMNSGA*LLTSVTMTVTSHVL
Trigger: CAGCACATGTGAGGTGACAGTCATGGTGACAGACGTCAACAACCATGCCCCTGAGTTCATCAATTCCCAGATTGGGCCTGTAACTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS-3UTR CAA 90 bp AGCTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCTGAGCTCAGGGATGTaGACTGTTGGGTCATGTGGG +
Preference number: 5 (lower is better)
Translates to: SSLSLYWTKSCHLECSHGLSSGM*TVGSCG
Trigger: CCCACATGACCCAACAGTCAACATCCCTGAGCTCAG...ACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS TCA 90 bp GTCGCCACTAGAAAGCCAGAGTCTGTGTCCACAGCAAAGGTGTTTTaGTCTGCCGTGTTTGAGTCTCCTGATAGGACAATGTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: VATRKPESVSTAKVF*SAVFESPDRTMWPS
Trigger: TGAAGGCCACATTGTCCTATCAGGAGACTCAAACACGGCAGATCAAAACACCTTTGCTGTGGACACAGACTCTGGCTTTCTAGTGGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212324.2
ENSMUST00000212447.2
ENSMUST00000212662.2
ENSMUST00000212882.2
CDS GCA 90 bp TGGCCTTCCACGTTGCAGCGACACACAATCACTTTGACCTGGAGTTaGCACATATGGGTATCATGGTGGACAACCACAGGTACCATGTAT +
Preference number: 5 (lower is better)
Translates to: WPSTLQRHTITLTWS*HIWVSWWTTTGTMY
Trigger: ATACATGGTACCTGTGGTTGTCCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CCA 90 bp ACGTTGCAGCGACACACAATCACTTTGACCTGGAGTTGCCACATATaGGTATCATGGTGGACAACCACAGGTACCATGTATTCACCAGGC +
Preference number: 5 (lower is better)
Translates to: TLQRHTITLTWSCHI*VSWWTTTGTMYSPG
Trigger: GCCTGGTGAATACATGGTACCTGTGGTTGTCCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CCA 90 bp ATACATTGGCCTTCCACGTTGCAGCGACACACAATCACTTTGACCTaGAGTTGCCACATATGGGTATCATGGTGGACAACCACAGGTACC +
Preference number: 5 (lower is better)
Translates to: IHWPSTLQRHTITLT*SCHIWVSWWTTTGT
Trigger: GGTACCTGTGGTTGTCCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CCA 90 bp CAGGTGCGTGAACACAAGAATGAGAATGAAGCCTTGCGCATACATTaGCCTTCCACGTTGCAGCGACACACAATCACTTTGACCTGGAGT +
Preference number: 5 (lower is better)
Translates to: QVREHKNENEALRIH*PSTLQRHTITLTWS
Trigger: ACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGCTTCATTCTCATTCTTGTGTTCACGCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
CDS-3UTR CAA 90 bp TCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATGATGGCCTGGGAGAATaGGGGTACCTGGTCATTCTC +
Preference number: 5 (lower is better)
Translates to: SLSLYWTKSCHLECSHGHDGLGE*GYLVIL
Trigger: GAGAATGACCAGGTACCCCAATTCTCCCAGGCCATC...ATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS-3UTR CAA 90 bp TCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATGGTCATCTGAGCTCAGGGATGTaGACTGTTGGGTCATGTGGG +
Preference number: 5 (lower is better)
Translates to: SLSLYWTKSCHLECSHGHLSSGM*TVGSCG
Trigger: CCCACATGACCCAACAGTCAACATCCCTGAGCTCAG...ATGACCATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
CDS GCA 90 bp GAAATTTCCACCATAGTTTTCAGGGACTTCTGTGTGCAGGCTTTCTaGAGGCTGGGCCTCAGTGGTGAAAGCCTGAATAACAGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: EISTIVFRDFCVQAF*RLGLSGESLNNREV
Trigger: TACCTCTCTGTTATTCAGGCTTTCACCACTGAGGCCCAGCCTGCAGAAAGCCTGCACACAGAAGTCCCTGAAAACTATGGTGGAAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000211903.2
ENSMUST00000212324.2
ENSMUST00000212447.2
ENSMUST00000212662.2
ENSMUST00000212882.2
CDS-3UTR CAA 90 bp TCTAGCTCTCTGAGCCTTTATTGGACAAAGAGCTGCCATTTGGAGTGTTCCCATCATTGGCCTTCCACGTaGCAGCGACACACAATCACT +
Preference number: 5 (lower is better)
Translates to: SSSLSLYWTKSCHLECSHHWPST*QRHTIT
Trigger: AGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATG...ATGGGAACACTCCAAATGGCAGCTCTTTGTCCAATAAAGGCTCAGAGAGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000213033.2
CDS-3UTR CAA 90 bp CTGCCATTTGGAGTGTTCCCATGGTCATCCCATAAAGTAGGTGCTCAGGCTTTGAATGAGAATGAAGCCTaGCGCATACATTGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: LPFGVFPWSSHKVGAQALNENEA*RIHWPS
Trigger: GGAAGGCCAATGTATGCGCAAGGCTTCATTCTCATT...CAAAGCCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
CDS CCA 72 bp GAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTTaGATCATTCACACCGCTGCCTTCAGAGGCACGCTG +
Preference number: 6 (lower is better)
Translates to: EGAGANLPAGAA*IIHTAAFRGTL
Trigger: CAGCGTGCCTCTGAAGGCAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS CAA 72 bp AGAGGGAGCTGGGGCCAACCTCCCAGCTGGGGCTGCTaGGATCATTCACACCGCTGCCTTCAGAGGCACGCT +
Preference number: 6 (lower is better)
Translates to: RGSWGQPPSWGC*DHSHRCLQRHA
Trigger: AGCGTGCCTCTGAAGGCAGCGGTGTGAATGATCCAAGCAGCCCCAGCTGGGAGGTTGGCCCCAGCTCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS CCA 72 bp TGGGCCTCCACAAGCACTGTGTATGTGTCTCCAGGCTaGGCACCCTGCAGGGACTGGGCTGTGTGTACCTCC +
Preference number: 6 (lower is better)
Translates to: WASTSTVYVSPG*APCRDWAVCTS
Trigger: GGAGGTACACACAGCCCAGTCCCTGCAGGGTGCCCAGCCTGGAGACACATACACAGTGCTTGTGGAGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 72 bp CACCGTAGTCTTGGCGGGGTGTACAGAGGTGTCGGCTaGGCCCAGCAGACAGAGTCAATGCTGGGACAGGAG +
Preference number: 6 (lower is better)
Translates to: HRSLGGVYRGVG*AQQTESMLGQE
Trigger: CTCCTGTCCCAGCATTGACTCTGTCTGCTGGGCCCAGCCGACACCTCTGTACACCCCGCCAAGACTACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS TCA 72 bp TATCGCTGCCAGGGTGCCCAAGAGGACACCCACCGCTaGCAGTTTCGTGGGCATTCCCTTCATGCGACCCAC +
Preference number: 6 (lower is better)
Translates to: YRCQGAQEDTHR*QFRGHSLHATH
Trigger: GTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGGGTGTCCTCTTGGGCACCCTGGCAGCGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
ENSMUST00000213033.2
CDS GCA 72 bp GATCATTCACACCGCTGCCTTCAGAGGCACGCTGTCTaGTGGCTGATCCAGGTCCTTCCTTGCCAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: DHSHRCLQRHAV*WLIQVLPCQGQ
Trigger: CTGGCCCTGGCAAGGAAGGACCTGGATCAGCCAGCAGACAGCGTGCCTCTGAAGGCAGCGGTGTGAATGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS CCA 72 bp GAGGCTGGAGGCGCCAATCCCGCTGCACAGTGGGATTaGGACCGAGAGCAAAGCTGTAGGGACCATTCCTGT +
Preference number: 6 (lower is better)
Translates to: EAGGANPAAQWD*DREQSCRDHSC
Trigger: ACAGGAATGGTCCCTACAGCTTTGCTCTCGGTCCCAATCCCACTGTGCAGCGGGATTGGCGCCTCCAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CCA 72 bp GGGTGCCCAAGAGGACACCCACCGCTGACAGTTTCGTaGGCATTCCCTTCATGCGACCCACCTTGCGCATAC +
Preference number: 6 (lower is better)
Translates to: GCPRGHPPLTVS*AFPSCDPPCAY
Trigger: GTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGGGTGTCCTCTTGGGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
ENSMUST00000213033.2
CDS CAA 90 bp GCACCCTGCAGGGACTGGGCTGTGTGTACCTCCCCAGACACCTCCTaGATACAGAGCCAGCCCTCTGAGTCATTGACCAGGGAGAACCTG +
Preference number: 6 (lower is better)
Translates to: APCRDWAVCTSPDTS*IQSQPSESLTRENL
Trigger: CAGGTTCTCCCTGGTCAATGACTCAGAGGGCTGGCTCTGTATCAAGGAGGTGTCTGGGGAGGTACACACAGCCCAGTCCCTGCAGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS GCA 72 bp ACAGAGGTGTCGGCTGGGCCCAGCAGACAGAGTCAATaGTGGGACAGGAGAGGCCTTCAGGAAGTGGATCAC +
Preference number: 6 (lower is better)
Translates to: TEVSAGPSRQSQ*WDRRGLQEVDH
Trigger: GTGATCCACTTCCTGAAGGCCTCTCCTGTCCCAGCATTGACTCTGTCTGCTGGGCCCAGCCGACACCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 72 bp ATGGAGCATCCCCTCTGTATCCACATCGAAGGGTCCTaGAGGCTGGCTCTCCAGCTGGTAGTGCACGTCTCC +
Preference number: 6 (lower is better)
Translates to: MEHPLCIHIEGS*RLALQLVVHVS
Trigger: GGAGACGTGCACTACCAGCTGGAGAGCCAGCCTCCAGGACCCTTCGATGTGGATACAGAGGGGATGCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 72 bp TCAGCCTGGGCCTCCCGGTCCAGCTCCATGGTAACATaGAGCATCCCCTCTGTATCCACATCGAAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: SAWASRSSSMVT*SIPSVSTSKGP
Trigger: AGGACCCTTCGATGTGGATACAGAGGGGATGCTCCATGTTACCATGGAGCTGGACCGGGAGGCCCAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CAA 90 bp TCTCCTTGGGATGGCCAATGGGATCTCCAGTGCAGGTGTGAGGTGTaGGTTTCTGAGTCCATCTGCAGTCTCTCCTCCAGGCCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: SPWDGQWDLQCRCEV*VSESICSLSSRPAR
Trigger: CCTGGCTGGCCTGGAGGAGAGACTGCAGATGGACTCAGAAACCAACACCTCACACCTGCACTGGAGATCCCATTGGCCATCCCAAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS TCA 72 bp AGGGACCATTCCTGTTGGCTAGGTCAGGGTCCTCACTaGCCCCACTCACAACTACACCGTAGTCTTGGCGGG +
Preference number: 6 (lower is better)
Translates to: RDHSCWLGQGPH*PHSQLHRSLGG
Trigger: CCCGCCAAGACTACGGTGTAGTTGTGAGTGGGGTCAGTGAGGACCCTGACCTAGCCAACAGGAATGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS GCA 72 bp CACCCACCGCTGACAGTTTCGTGGGCATTCCCTTCATaGGACCCACCTTGCGCATACATTGGCCTTCCACGT +
Preference number: 6 (lower is better)
Translates to: HPPLTVSWAFPS*DPPCAYIGLPR
Trigger: ACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
ENSMUST00000213033.2
CDS CCA 72 bp ATAGCTGGTAAGTCTCTTCAAGGGCATGGTCTAGGCTaGTGCTTCCAGGCCTGGTGCCCTGGCTCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: IAGKSLQGHGLG*CFQAWCPGSAE
Trigger: CTCAGCTGAGCCAGGGCACCAGGCCTGGAAGCACCAGCCTAGACCATGCCCTTGAAGAGACTTACCAGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212447.2
CDS CAA 90 bp CCCACCGCTGACAGTTTCGTGGGCATTCCCTTCATGCGACCCACCTaGCGCATACATTGGCCTTCCACGTTGCAGCGACACACAATCACT +
Preference number: 6 (lower is better)
Translates to: PTADSFVGIPFMRPT*RIHWPSTLQRHTIT
Trigger: AGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTCAGCGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
ENSMUST00000213033.2
CDS TCA 72 bp GGCGGAAGGCAGGTTCAAGGTCAGCATCAGTGGCCATaGGTGTTGCCACCAGAGCCCCAGGTTTTACATCCT +
Preference number: 6 (lower is better)
Translates to: GGRQVQGQHQWP*VLPPEPQVLHP
Trigger: AGGATGTAAAACCTGGGGCTCTGGTGGCAACACTCATGGCCACTGATGCTGACCTTGAACCTGCCTTCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000212882.2
CDS TCA 72 bp GGAGACAGGCTTCCTAAATGTGAACATCTGGGCAAGTaGCCTATCGCTGCCAGGGTGCCCAAGAGGACACCC +
Preference number: 6 (lower is better)
Translates to: GDRLPKCEHLGK*PIAARVPKRTP
Trigger: GGGTGTCCTCTTGGGCACCCTGGCAGCGATAGGTCACTTGCCCAGATGTTCACATTTAGGAAGCCTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS CCA 72 bp AAGCAGAGAATGGAGCTGGGTGGGGAAGGTTCTCCTTaGGATGGCCAATGGGATCTCCAGTGCAGGTGTGAG +
Preference number: 6 (lower is better)
Translates to: KQRMELGGEGSP*DGQWDLQCRCE
Trigger: CTCACACCTGCACTGGAGATCCCATTGGCCATCCCAAGGAGAACCTTCCCCACCCAGCTCCATTCTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS CAA 72 bp GACACCTCCTTGATACAGAGCCAGCCCTCTGAGTCATaGACCAGGGAGAACCTGAGGGTTCTGCTCATGGGG +
Preference number: 6 (lower is better)
Translates to: DTSLIQSQPSES*TRENLRVLLMG
Trigger: CCCCATGAGCAGAACCCTCAGGTTCTCCCTGGTCAATGACTCAGAGGGCTGGCTCTGTATCAAGGAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CAA 72 bp GACAGTTTCGTGGGCATTCCCTTCATGCGACCCACCTaGCGCATACATTGGCCTTCCACGTTGCAGCGACAC +
Preference number: 6 (lower is better)
Translates to: DSFVGIPFMRPT*RIHWPSTLQRH
Trigger: GTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
ENSMUST00000213033.2
CDS CAA 90 bp GATCACAACAGTGGCAGAAGTGCTCAGTCCTGGCTTATCTGTGTCTaGGGCCTCCACAAGCACTGTGTATGTGTCTCCAGGCTGGGCACC +
Preference number: 6 (lower is better)
Translates to: DHNSGRSAQSWLICV*GLHKHCVCVSRLGT
Trigger: GGTGCCCAGCCTGGAGACACATACACAGTGCTTGTGGAGGCCCAAGACACAGATAAGCCAGGACTGAGCACTTCTGCCACTGTTGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS GCA 72 bp GTTACTCACGACCACCACCACCTTGTGATCAGGAGCTaGCTCATAGCTGAGGTTCTTCCGGAGTCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: VTHDHHHLVIRS*LIAEVLPESEL
Trigger: CAGCTCAGACTCCGGAAGAACCTCAGCTATGAGGCAGCTCCTGATCACAAGGTGGTGGTGGTCGTGAGTAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212420.2
ENSMUST00000212882.2
ENSMUST00000213033.2
CDS GCA 72 bp ACAGTTTCGTGGGCATTCCCTTCATGCGACCCACCTTaGGCATACATTGGCCTTCCACGTTGCAGCGACACA +
Preference number: 6 (lower is better)
Translates to: TVSWAFPSCDPP*AYIGLPRCSDT
Trigger: TGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
ENSMUST00000213033.2
CDS GCA 72 bp TGCGACCCACCTTGCGCATACATTGGCCTTCCACGTTaGAGCGACACACAATCACTGAGGGTTCTGCTCATG +
Preference number: 6 (lower is better)
Translates to: CDPPCAYIGLPR*SDTQSLRVLLM
Trigger: CATGAGCAGAACCCTCAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS CCA 72 bp GTGGCAGAAGTGCTCAGTCCTGGCTTATCTGTGTCTTaGGCCTCCACAAGCACTGTGTATGTGTCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: VAEVLSPGLSVS*ASTSTVYVSPG
Trigger: GCCTGGAGACACATACACAGTGCTTGTGGAGGCCCAAGACACAGATAAGCCAGGACTGAGCACTTCTGCCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 72 bp GGCATTCCCTTCATGCGACCCACCTTGCGCATACATTaGCCTTCCACGTTGCAGCGACACACAATCACTGAG +
Preference number: 6 (lower is better)
Translates to: GIPFMRPTLRIH*PSTLQRHTITE
Trigger: CTCAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS CCA 72 bp ATGGCCAATGGGATCTCCAGTGCAGGTGTGAGGTGTTaGTTTCTGAGTCCATCTGCAGTCTCTCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: MANGISSAGVRC*FLSPSAVSPPG
Trigger: GCCTGGAGGAGAGACTGCAGATGGACTCAGAAACCAACACCTCACACCTGCACTGGAGATCCCATTGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS CCA 72 bp CTGCTGGACAGGTGTAACTTAAGCAGAGAATGGAGCTaGGTGGGGAAGGTTCTCCTTGGGATGGCCAATGGG +
Preference number: 6 (lower is better)
Translates to: LLDRCNLSREWS*VGKVLLGMANG
Trigger: CCCATTGGCCATCCCAAGGAGAACCTTCCCCACCCAGCTCCATTCTCTGCTTAAGTTACACCTGTCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2
CDS CAA 72 bp GTTACACTGCCTGAGGTCGGATCTAACTCGAAGGCTTaGTTTTCAGCCCCCTCCTCAGGCTCAGGGCTCAAC +
Preference number: 6 (lower is better)
Translates to: VTLPEVGSNSKA*FSAPSSGSGLN
Trigger: GTTGAGCCCTGAGCCTGAGGAGGGGGCTGAAAACAAAGCCTTCGAGTTAGATCCGACCTCAGGCAGTGTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CAA 90 bp CAGTTTCGTGGGCATTCCCTTCATGCGACCCACCTTGCGCATACATaGGCCTTCCACGTTGCAGCGACACACAATCACTTTGACCTGGAG +
Preference number: 6 (lower is better)
Translates to: QFRGHSLHATHLAHT*AFHVAATHNHFDLE
Trigger: CTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCCACGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS TCA 72 bp AGTGCACCTGGGCAATGCTGTGTGGGTACACAACTTTaGGATTCTCTGCCAGGTGAACAGGCTCTAGGGGTG +
Preference number: 6 (lower is better)
Translates to: SAPGQCCVGTQL*DSLPGEQALGV
Trigger: CACCCCTAGAGCCTGTTCACCTGGCAGAGAATCTCAAAGTTGTGTACCCACACAGCATTGCCCAGGTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212447.2
ENSMUST00000212882.2
CDS GCA 72 bp AGGCCTTCAGGAAGTGGATCACAACAGTGGCAGAAGTaGTCAGTCCTGGCTTATCTGTGTCTTGGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: RPSGSGSQQWQK*SVLAYLCLGPP
Trigger: TGGAGGCCCAAGACACAGATAAGCCAGGACTGAGCACTTCTGCCACTGTTGTGATCCACTTCCTGAAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 72 bp GGGGCTGAGCTCAGGGATGTTGACTGTTGGGTCATGTaGGGAGCAGACAGGTGCATTGTCGTTTTCATCCAT +
Preference number: 6 (lower is better)
Translates to: GAELRDVDCWVM*GADRCIVVFIH
Trigger: ATGGATGAAAACGACAATGCACCTGTCTGCTCCCCACATGACCCAACAGTCAACATCCCTGAGCTCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CCA 72 bp GGCATTCCCTTCATGCGACCCACCTTGCGCATACATTaGCCTTCCACGTTGCAGCGACACACAATCACTTTG +
Preference number: 6 (lower is better)
Translates to: GIPFMRPTLRIH*PSTLQRHTITL
Trigger: CAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CCA 72 bp AGGGATGTGGAGACAGGCTTCCTAAATGTGAACATCTaGGCAAGTGACCTATCGCTGCCAGGGTGCCCAAGA +
Preference number: 6 (lower is better)
Translates to: RDVETGFLNVNI*ASDLSLPGCPR
Trigger: TCTTGGGCACCCTGGCAGCGATAGGTCACTTGCCCAGATGTTCACATTTAGGAAGCCTGTCTCCACATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212882.2
CDS CAA 72 bp ATGCGACCCACCTTGCGCATACATTGGCCTTCCACGTaGCAGCGACACACAATCACTTTGACCTGGAGTTGC +
Preference number: 6 (lower is better)
Translates to: MRPTLRIHWPST*QRHTITLTWSC
Trigger: GCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CAA 72 bp GGGCATTCCCTTCATGCGACCCACCTTGCGCATACATaGGCCTTCCACGTTGCAGCGACACACAATCACTTT +
Preference number: 6 (lower is better)
Translates to: GHSLHATHLAHT*AFHVAATHNHF
Trigger: AAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CAA 72 bp ATGCGACCCACCTTGCGCATACATTGGCCTTCCACGTaGCAGCGACACACAATCACTGAGGGTTCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: MRPTLRIHWPST*QRHTITEGSAH
Trigger: ATGAGCAGAACCCTCAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213033.2
CDS CAA 90 bp CCTTGCCAGGGCCAGGTGCGTGAACACAAGAATGAGAATGAAGCCTaGCGCATACATTGGCCTTCCACGTTGCAGCGACACACAATCACT +
Preference number: 6 (lower is better)
Translates to: PCQGQVREHKNENEA*RIHWPSTLQRHTIT
Trigger: AGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGCTTCATTCTCATTCTTGTGTTCACGCACCTGGCCCTGGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
CDS TCA 72 bp CTGTGTGGGTACACAACTTTGAGATTCTCTGCCAGGTaGACAGGCTCTAGGGGTGCCCAGCTGTTCTCTACT +
Preference number: 6 (lower is better)
Translates to: LCGYTTLRFSAR*TGSRGAQLFST
Trigger: AGTAGAGAACAGCTGGGCACCCCTAGAGCCTGTTCACCTGGCAGAGAATCTCAAAGTTGTGTACCCACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212447.2
ENSMUST00000212882.2
CDS GCA 72 bp AGGTACCATGTATTCACCAGGCTCTACCCAATGCAATaGCAAGGTGAGGTAGGCGTGGGAATCGTTGAGAGG +
Preference number: 6 (lower is better)
Translates to: RYHVFTRLYPMQ*QGEVGVGIVER
Trigger: CCTCTCAACGATTCCCACGCCTACCTCACCTTGGCATTGCATTGGGTAGAGCCTGGTGAATACATGGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS GCA 72 bp GCCAGGTGCGTGAACACAAGAATGAGAATGAAGCCTTaGGCATACATTGGCCTTCCACGTTGCAGCGACACA +
Preference number: 6 (lower is better)
Translates to: ARCVNTRMRMKP*AYIGLPRCSDT
Trigger: TGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGCTTCATTCTCATTCTTGTGTTCACGCACCTGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
CDS CCA 72 bp ATCTCTACAGTTGCAATAGCCTGGTGGCCTGAAGGCTaGTCACCCATGTCCTTGACCTGTACCAATAGCTGG +
Preference number: 6 (lower is better)
Translates to: ISTVAIAWWPEG*SPMSLTCTNSW
Trigger: CCAGCTATTGGTACAGGTCAAGGACATGGGTGACCAGCCTTCAGGCCACCAGGCTATTGCAACTGTAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212447.2
ENSMUST00000212882.2
CDS CAA 90 bp AGCCAGAGTCTGTGTCCACAGCAAAGGTGTTTTGATCTGCCGTGTTaGAGTCTCCTGATAGGACAATGTGGCCTTCATCTCTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: SQSLCPQQRCFDLPC*SLLIGQCGLHLSPG
Trigger: CCCTGGGGAGAGATGAAGGCCACATTGTCCTATCAGGAGACTCAAACACGGCAGATCAAAACACCTTTGCTGTGGACACAGACTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212324.2
ENSMUST00000212447.2
ENSMUST00000212662.2
ENSMUST00000212748.2
ENSMUST00000212882.2
CDS CAA 90 bp GTTACAGGCCCAATCTGGGAATTGATGAACTCAGGGGCATGGTTGTaGACGTCTGTCACCATGACTGTCACCTCACATGTGCTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: VTGPIWELMNSGAWL*TSVTMTVTSHVLLR
Trigger: CCTCAGCAGCACATGTGAGGTGACAGTCATGGTGACAGACGTCAACAACCATGCCCCTGAGTTCATCAATTCCCAGATTGGGCCTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CAA 90 bp ATTCCCTTCATGCGACCCACCTTGCGCATACATTGGCCTTCCACGTaGCAGCGACACACAATCACTTTGACCTGGAGTTGCCACATATGG +
Preference number: 6 (lower is better)
Translates to: IPFMRPTLRIHWPST*QRHTITLTWSCHIW
Trigger: CCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGTGGGTCGCATGAAGGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163783.4
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS GCA 72 bp ACCATAGTTTTCAGGGACTTCTGTGTGCAGGCTTTCTaGAGGCTGGGCCTCAGTGGTGAAAGCCTGAATAAC +
Preference number: 6 (lower is better)
Translates to: TIVFRDFCVQAF*RLGLSGESLNN
Trigger: GTTATTCAGGCTTTCACCACTGAGGCCCAGCCTGCAGAAAGCCTGCACACAGAAGTCCCTGAAAACTATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000211903.2
ENSMUST00000212324.2
ENSMUST00000212447.2
ENSMUST00000212662.2
ENSMUST00000212882.2
CDS GCA 72 bp AGGTACCATGTATTCACCAGGCTCTACCCAATGCAATaGCAAGGTGAGGTAGGCGTGGGAATCTGTTGGGTT +
Preference number: 6 (lower is better)
Translates to: RYHVFTRLYPMQ*QGEVGVGICWV
Trigger: AACCCAACAGATTCCCACGCCTACCTCACCTTGGCATTGCATTGGGTAGAGCCTGGTGAATACATGGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211889.2
CDS CCA 72 bp CCTTCCACGTTGCAGCGACACACAATCACTTTGACCTaGAGTTGCCACATATGGGTATCATGGTGGACAACC +
Preference number: 6 (lower is better)
Translates to: PSTLQRHTITLT*SCHIWVSWWTT
Trigger: GGTTGTCCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CAA 72 bp CACGTTGCAGCGACACACAATCACTTTGACCTGGAGTaGCCACATATGGGTATCATGGTGGACAACCACAGG +
Preference number: 6 (lower is better)
Translates to: HVAATHNHFDLE*PHMGIMVDNHR
Trigger: CCTGTGGTTGTCCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CAA 72 bp CATTGGCCTTCCACGTTGCAGCGACACACAATCACTTaGACCTGGAGTTGCCACATATGGGTATCATGGTGG +
Preference number: 6 (lower is better)
Translates to: HWPSTLQRHTIT*TWSCHIWVSWW
Trigger: CCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CAA 72 bp GAGAATGAAGCCTTGCGCATACATTGGCCTTCCACGTaGCAGCGACACACAATCACTTTGACCTGGAGTTGC +
Preference number: 6 (lower is better)
Translates to: ENEALRIHWPST*QRHTITLTWSC
Trigger: GCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGCTTCATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
CDS CAA 90 bp TTGGCCTTCCACGTTGCAGCGACACACAATCACTTTGACCTGGAGTaGCCACATATGGGTATCATGGTGGACAACCACAGGTACCATGTA +
Preference number: 6 (lower is better)
Translates to: LAFHVAATHNHFDLE*PHMGIMVDNHRYHV
Trigger: TACATGGTACCTGTGGTTGTCCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CAA 90 bp TTGCGCATACATTGGCCTTCCACGTTGCAGCGACACACAATCACTTaGACCTGGAGTTGCCACATATGGGTATCATGGTGGACAACCACA +
Preference number: 6 (lower is better)
Translates to: LRIHWPSTLQRHTIT*TWSCHIWVSWWTTT
Trigger: TGTGGTTGTCCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS GCA 72 bp ACGTTGCAGCGACACACAATCACTTTGACCTGGAGTTaGCACATATGGGTATCATGGTGGACAACCACAGGT +
Preference number: 6 (lower is better)
Translates to: TLQRHTITLTWS*HIWVSWWTTTG
Trigger: ACCTGTGGTTGTCCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CAA 72 bp CCAATCTGGGAATTGATGAACTCAGGGGCATGGTTGTaGACGTCTGTCACCATGACTGTCACCTCACATGTG +
Preference number: 6 (lower is better)
Translates to: PIWELMNSGAWL*TSVTMTVTSHV
Trigger: CACATGTGAGGTGACAGTCATGGTGACAGACGTCAACAACCATGCCCCTGAGTTCATCAATTCCCAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212882.2
CDS CAA 90 bp CACAAGAATGAGAATGAAGCCTTGCGCATACATTGGCCTTCCACGTaGCAGCGACACACAATCACTTTGACCTGGAGTTGCCACATATGG +
Preference number: 6 (lower is better)
Translates to: HKNENEALRIHWPST*QRHTITLTWSCHIW
Trigger: CCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGCTTCATTCTCATTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
CDS CAA 72 bp CTGTGTCCACAGCAAAGGTGTTTTGATCTGCCGTGTTaGAGTCTCCTGATAGGACAATGTGGCCTTCATCTC +
Preference number: 6 (lower is better)
Translates to: LCPQQRCFDLPC*SLLIGQCGLHL
Trigger: GAGATGAAGGCCACATTGTCCTATCAGGAGACTCAAACACGGCAGATCAAAACACCTTTGCTGTGGACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212324.2
ENSMUST00000212447.2
ENSMUST00000212662.2
ENSMUST00000212748.2
ENSMUST00000212882.2
CDS TCA 72 bp AGAAAGCCAGAGTCTGTGTCCACAGCAAAGGTGTTTTaGTCTGCCGTGTTTGAGTCTCCTGATAGGACAATG +
Preference number: 6 (lower is better)
Translates to: RKPESVSTAKVF*SAVFESPDRTM
Trigger: CATTGTCCTATCAGGAGACTCAAACACGGCAGATCAAAACACCTTTGCTGTGGACACAGACTCTGGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000163783.4
ENSMUST00000211903.2
ENSMUST00000212324.2
ENSMUST00000212447.2
ENSMUST00000212662.2
ENSMUST00000212748.2
ENSMUST00000212882.2
CDS CCA 72 bp CGACACACAATCACTTTGACCTGGAGTTGCCACATATaGGTATCATGGTGGACAACCACAGGTACCATGTAT +
Preference number: 6 (lower is better)
Translates to: RHTITLTWSCHI*VSWWTTTGTMY
Trigger: ATACATGGTACCTGTGGTTGTCCACCATGATACCCATATGTGGCAACTCCAGGTCAAAGTGATTGTGTGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000163783.4
ENSMUST00000211849.2
ENSMUST00000211889.2
ENSMUST00000211903.2
ENSMUST00000212045.2
ENSMUST00000212882.2
CDS CCA 72 bp GAACACAAGAATGAGAATGAAGCCTTGCGCATACATTaGCCTTCCACGTTGCAGCGACACACAATCACTTTG +
Preference number: 6 (lower is better)
Translates to: EHKNENEALRIH*PSTLQRHTITL
Trigger: CAAAGTGATTGTGTGTCGCTGCAACGTGGAAGGCCAATGTATGCGCAAGGCTTCATTCTCATTCTTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211849.2
CDS TCA 72 bp GAGGAGATGTTACTTCCAAAAGGACCTTTTGCATGTTaGAGACTGCTGGACAGGTGTAACTTAAGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: EEMLLPKGPFAC*RLLDRCNLSRE
Trigger: TTCTCTGCTTAAGTTACACCTGTCCAGCAGTCTTCAACATGCAAAAGGTCCTTTTGGAAGTAACATCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212318.2