Pregenerated sensors for CDH15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031962Ensembl transcript IDs: ENSMUST00000034443.7
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAAGGGTGGCTTCTGCACTCTGCCAGGACAGTGCTCCCTCTAGCTaGCTAGTCCATGCTCCAGATTCTCCCACCACTCCTGACTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: LRVASALCQDSAPSS*LVHAPDSPTTPDSV Trigger: GACTGAGTCAGGAGTGGTGGGAGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGCAGAAGCCACCCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| 3UTR TCA 90 bp | TTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATaGGCCCTAGCAGGGCGACTAAGGGTGGCTTCTGCACTCTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: FSYRGKSHNWESKMG*ALAGRLRVASALCQ Trigger: CTGGCAGAGTGCAGAAGCCACCCTTAGTCGCCCTGCTAGGGCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| 3UTR GCA 90 bp | CCACCAAATAGTATGCTTTTAATTGAAATCCACTCTTTAGACGCCTaGTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATG | + |
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Preference number: 1 (lower is better) Translates to: PPNSMLLIEIHSLDA*FSYRGKSHNWESKM Trigger: CATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTCAATTAAAAGCATACTATTTGGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| 3UTR GCA 72 bp | GCCCTAGCAGGGCGACTAAGGGTGGCTTCTGCACTCTaGCAGGACAGTGCTCCCTCTAGCTGCCTAGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: ALAGRLRVASAL*QDSAPSSCLVH Trigger: ATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGCAGAAGCCACCCTTAGTCGCCCTGCTAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| 3UTR CCA 72 bp | GCACATCCCAAGAGAGAGCCCCTTAGTTGGGCCAAGTaGGCGTATCCACACAGCACATCTGCCCTTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: AHPKREPLSWAK*AYPHSTSALGP Trigger: AGGGCCAAGGGCAGATGTGCTGTGTGGATACGCCCACTTGGCCCAACTAAGGGGCTCTCTCTTGGGATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| 3UTR GCA 72 bp | GCTTCTGCACTCTGCCAGGACAGTGCTCCCTCTAGCTaGCTAGTCCATGCTCCAGATTCTCCCACCACTCCT | + |
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Preference number: 3 (lower is better) Translates to: ASALCQDSAPSS*LVHAPDSPTTP Trigger: AGGAGTGGTGGGAGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGCAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| 3UTR TCA 72 bp | CTGCCTAGTCCATGCTCCAGATTCTCCCACCACTCCTaGCTCAGTCCTCTCTTGGACCTCACAGAGATGACC | + |
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Preference number: 3 (lower is better) Translates to: LPSPCSRFSHHS*LSPLLDLTEMT Trigger: GGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAGTGGTGGGAGAATCTGGAGCATGGACTAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| 3UTR TCA 72 bp | AGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATaGGCCCTAGCAGGGCGACTAAGGGTGGCTTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: RGKSHNWESKMG*ALAGRLRVASA Trigger: TGCAGAAGCCACCCTTAGTCGCCCTGCTAGGGCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| 3UTR-3UTR CAA 90 bp | AGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGACAGAGATGACCTCCTaGAGTTTATCTGCCATGGAG | + |
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Preference number: 3 (lower is better) Translates to: RRLLFIQRQESQLGIKDGTEMTS*SLSAME Trigger: CTCCATGGCAGATAAACTCAAGGAGGTCATCTCTGT...CCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| 3UTR GCA 72 bp | AGTATGCTTTTAATTGAAATCCACTCTTTAGACGCCTaGTTTTCATACAGAGGCAAGAGTCACAACTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SMLLIEIHSLDA*FSYRGKSHNWE Trigger: TTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTCAATTAAAAGCATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | GGGCGACTAAGGGTGGCTTCTGCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCGCCCCCGGAACCGTGTaGGGAGCGCGGCAAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GRLRVASALCQDSAPSSCAPGTV*GARQAG Trigger: TCCTGCTTGCCGCGCTCCGCACACGGTTCCGGGGGC...GCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGCAGAAGCCACCCTTAGTCGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | GGGCGACTAAGGGTGGCTTCTGCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCGCCAGGGGTACAGGGTaGTGGGTTTGGGCTCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GRLRVASALCQDSAPSSCARGTG*WVWAQG Trigger: TCCCTGAGCCCAAACCCAGCACCCTGTACCCCTGGC...GCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGCAGAAGCCACCCTTAGTCGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | GGGCGACTAAGGGTGGCTTCTGCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCCACCTTCAAGGATGGTaGACCTGGCCACCCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GRLRVASALCQDSAPSSCHLQGW*TWPPSW Trigger: CCAACTGGGTGGCCAGGTTCACCATCCTTGAAGGTG...GCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGCAGAAGCCACCCTTAGTCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | GCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCCTAGTCCATGCTCCAGATTCTGGCCCTCGGCTCCACTaGGTGGCGCAGCTGGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: ALCQDSAPSSCLVHAPDSGPRLH*VAQLVY Trigger: ATAAACCAGCTGCGCCACCCAGTGGAGCCGAGGGCC...AGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | GCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCCTAGTCCATGCTCCAGATTCTCAAAGGCCCTTAGCCTaGAGCGGTCCGTCTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: ALCQDSAPSSCLVHAPDSQRPLA*SGPSSR Trigger: GCGAGAAGACGGACCGCTTCAGGCTAAGGGCCTTTG...AGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | CTCTGCCAGGACAGTGCTCCCTCTAGCTGCCTAGTCCATGCTCCAGATTCTCCCGCGCGGCAAGCAGGATaGGAACTAGTAAGACCACGG | + |
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Preference number: 4 (lower is better) Translates to: LCQDSAPSSCLVHAPDSPARQAG*ELVRPR Trigger: CCGTGGTCTTACTAGTTCTCATCCTGCTTGCCGCGC...GGGAGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | ATGCTCCAGATTCTCCCACCACTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGCCAGGGCCCTGGTCTaGTTCACTGCACAGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: MLQILPPLLTQSSLGPHRARALV*FTAQAA Trigger: GGCAGCCTGTGCAGTGAACCAGACCAGGGCCCTGGC...TCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAGTGGTGGGAGAATCTGGAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | GCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCCTAGTCCATGCTCCAGATTCTATGTCGTACGCATCCTaGTCCTCCTCCCCGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ALCQDSAPSSCLVHAPDSMSYAS*SSSPPP Trigger: AGGAGGCGGGGAGGAGGACCAGGATGCGTACGACAT...AGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | GCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCCTAGTCCATGCTCCAGATTCTCCAGGCTGGACAGAATaGAGCTCAGCGTCCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ALCQDSAPSSCLVHAPDSPGWTE*SSASLP Trigger: TGGCAGGGACGCTGAGCTCCATTCTGTCCAGCCTGG...AGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | GAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGCACACGGCCTGGGGCTaGTGCCCGGCGCCAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: EIHSLDACFSYRGKSHNWHTAWG*CPAPGV Trigger: TACCCCTGGCGCCGGGCATCAGCCCCAGGCCGTGTG...CCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | ATGCTCCAGATTCTCCCACCACTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGCCCCACTTGCACCGTaGGGATCTCTCCCGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: MLQILPPLLTQSSLGPHRAPLAP*GSLPCA Trigger: AGCACACGGGAGAGATCCGCACGGTGCAAGTGGGGC...TCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAGTGGTGGGAGAATCTGGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | CGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCCCGAGGGGCAGCTaGCTGCAGCGGGGCCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: RLLFIQRQESQLGIKDGMSPRGS*LQRGLV Trigger: AACGAGGCCCCGCTGCAGGCAGCTGCCCCTCGGGCT...CATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | GGGCGACTAAGGGTGGCTTCTGCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCTATGCTCGTCCTCAGTaGGTTCTCTGGAAACACTGG | + |
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Preference number: 4 (lower is better) Translates to: GRLRVASALCQDSAPSSCYARPQ*VLWKHW Trigger: CCAGTGTTTCCAGAGAACCCACTGAGGACGAGCATA...GCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGCAGAAGCCACCCTTAGTCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | CTCTGCCAGGACAGTGCTCCCTCTAGCTGCCTAGTCCATGCTCCAGATTCTCCCCTTCTAGGATCTCGATaGACAGGGTGCCTGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LCQDSAPSSCLVHAPDSPLLGSR*TGCLWL Trigger: CAGCCACAGGCACCCTGTCCATCGAGATCCTAGAAG...GGGAGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | TTAGTTGGGCCAAGTGGGCGTATCCACACAGCACATCTGCCCTTGGCCCTGGCTGGCCGGTTGTCATTTTaGTCCACCACAACGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: LVGPSGRIHTAHLPLALAGRLSF*STTTIS Trigger: GGAGATCGTTGTGGTGGATCAAAATGACAACCGGCC...AGCCAGGGCCAAGGGCAGATGTGCTGTGTGGATACGCCCACTTGGCCCAACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | CTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCCCAGTGCCCCCAAGCTaGCGCCTACACCTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLTQSSLGPHRDDLLEFIPVPPS*RLHLLL Trigger: GAGGAGGAGGTGTAGGCGTCAGCTTGGGGGCACTGG...GATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | TTAGTTGGGCCAAGTGGGCGTATCCACACAGCACATCTGCCCTTGGCCCTGGCTGCTGTTTGTCAGACTTaGTCTGCACAAGTGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LVGPSGRIHTAHLPLALAAVCQT*SAQVGR Trigger: CCTACCCACTTGTGCAGATCAAGTCTGACAAACAGC...AGCCAGGGCCAAGGGCAGATGTGCTGTGTGGATACGCCCACTTGGCCCAACTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | GGGCGACTAAGGGTGGCTTCTGCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCATGACACTGCCTAGCTaGTGTTTGTCAGACTTGATC | + |
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Preference number: 4 (lower is better) Translates to: GRLRVASALCQDSAPSSCMTLPS*CLSDLI Trigger: GATCAAGTCTGACAAACAGCAGCTAGGCAGTGTCAT...GCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGCAGAAGCCACCCTTAGTCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | AGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGCGGTCCAGCCCCACTTaGACCGTGCGGATCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RRLLFIQRQESQLGIKDGRSSPT*TVRISP Trigger: GGGAGAGATCCGCACGGTGCAAGTGGGGCTGGACCG...CCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | TTAGTTGGGCCAAGTGGGCGTATCCACACAGCACATCTGCCCTTGGCCCTGGCTTCCACTGACAGCCTCTaGAGCCTCCATAAAGAACTC | + |
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Preference number: 4 (lower is better) Translates to: LVGPSGRIHTAHLPLALASTDSL*SLHKEL Trigger: GAGTTCTTTATGGAGGCTGCAGAGGCTGTCAGTGGA...AGCCAGGGCCAAGGGCAGATGTGCTGTGTGGATACGCCCACTTGGCCCAACTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | CTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCACCTGGCCACCCAGTTaGGGGAACCAGGCAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LLTQSSLGPHRDDLLEFITWPPS*GNQAGP Trigger: AGGACCTGCCTGGTTCCCCCAACTGGGTGGCCAGGT...GATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | GCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCCTAGTCCATGCTCCAGATTCTGGGAAGCACTCGATGTaGCTGTGGCACATAGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ALCQDSAPSSCLVHAPDSGKHSM*LWHIAE Trigger: TTCAGCTATGTGCCACAGCCACATCGAGTGCTTCCC...AGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | CGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGCCACGTCCACTCCACTaGCAGCCTCTGCAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RLLFIQRQESQLGIKDGMPRPLH*QPLQPP Trigger: TGGAGGCTGCAGAGGCTGTCAGTGGAGTGGACGTGG...CATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | CGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGACAGGGTGCTGGGTTTaGGCTCAGGGACTGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RLLFIQRQESQLGIKDGMTGCWV*AQGLPR Trigger: CCTGGGCAGTCCCTGAGCCCAAACCCAGCACCCTGT...CATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | CTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCAGGGGTACAGGGTGCTaGGTTTGGGCTCAGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: LLTQSSLGPHRDDLLEFIRGTGC*VWAQGL Trigger: CAGTCCCTGAGCCCAAACCCAGCACCCTGTACCCCT...GATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | CTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCGGTGACGAAGGTGCCTaGGATGGCACCCTCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LLTQSSLGPHRDDLLEFIGDEGA*DGTLQD Trigger: ATCCTGGAGGGTGCCATCCCAGGCACCTTCGTCACC...GATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | TTAGTTGGGCCAAGTGGGCGTATCCACACAGCACATCTGCCCTTGGCCCTGGCTTTGCAGCCAGTCTTCTaGGTCGTAGTCTTTGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: LVGPSGRIHTAHLPLALALQPVF*VVVFGV Trigger: TACTCCAAAGACTACGACCCAGAAGACTGGCTGCAA...AGCCAGGGCCAAGGGCAGATGTGCTGTGTGGATACGCCCACTTGGCCCAACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | AGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGGCAGGTCCTCATCCGTaGCACCCAAGAGGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RRLLFIQRQESQLGIKDGAGPHP*HPRGGQ Trigger: CTGGCCTCCTCTTGGGTGCCACGGATGAGGACCTGC...CCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | CTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCCTCGGCTCCACTGGGTaGCGCAGCTGGTTTATGTCG | + |
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Preference number: 4 (lower is better) Translates to: LLTQSSLGPHRDDLLEFILGSTG*RSWFMS Trigger: CGACATAAACCAGCTGCGCCACCCAGTGGAGCCGAG...GATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | CTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCTGTGCTCGTCGATGCTaGAGAACTCAGGGCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LLTQSSLGPHRDDLLEFICARRC*RTQGCP Trigger: AGGGCAGCCCTGAGTTCTTCAGCATCGACGAGCACA...GATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | AGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGGCTTCGTTGGTGTCCTaGACCCACACGCTGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: RRLLFIQRQESQLGIKDGASLVS*THTLTL Trigger: CAGGGTCAGCGTGTGGGTTCAGGACACCAACGAAGC...CCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | CTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCCCTGTGGCCCCGTCCACTTaGAGCCAGTCTTCTGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: LFIQRQESQLGIKDGMSPVAPST*SQSSGS Trigger: CGACCCAGAAGACTGGCTGCAAGTGGACGGGGCCAC...AGGGCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | CTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCTCTGGATCCTGCCTGTaGCCCCGTCCACTTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLFIQRQESQLGIKDGMSSGSCL*PRPLAA Trigger: GGCTGCAAGTGGACGGGGCCACAGGCAGGATCCAGA...GCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | GAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGGGCTCAGCACTCGCTaGGTCTGGATCCTGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: EIHSLDACFSYRGKSHNWGLSTR*VWILPV Trigger: CACAGGCAGGATCCAGACCCAGCGAGTGCTGAGCCC...CCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | CTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCGGGTTCAGCTGGAAGTaGAAAGGGGCCCCGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LLFIQRQESQLGIKDGMSGFSWK*KGAPCG Trigger: CCCACACGGGGCCCCTTTCCACTTCCAGCTGAACCC...GCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| 3UTR CAA 72 bp | GTTTATCTGCCATGGAGCCAAGGATGGGCCATGCTGTaGACCCTCATAGGATTTCTGGGTGCACATCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: VYLPWSQGWAML*TLIGFLGAHPK Trigger: CTTGGGATGTGCACCCAGAAATCCTATGAGGGTCAACAGCATGGCCCATCCTTGGCTCCATGGCAGATAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | CTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCCCAGGATGGAGAACCTaGGGGCTGCATTGTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LLTQSSLGPHRDDLLEFIPGWRT*GLHCLS Trigger: AGACAGACAATGCAGCCCTCAGGTTCTCCATCCTGG...GATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | GAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGTTTGGGCTCAGGGACTaGCCAGGACAGGCCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIHSLDACFSYRGKSHNWFGLRD*PGQAKA Trigger: AGCCTTGGCCTGTCCTGGGCAGTCCCTGAGCCCAAA...CCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | CTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCCGGATCTCTCCCGTGTaGTCGTCGATGCTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLTQSSLGPHRDDLLEFIRISPV*SSMLKN Trigger: GTTCTTCAGCATCGACGAGCACACGGGAGAGATCCG...GATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | CGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGTGGAGGAAGAGCCAGTaGAGGGGCATGGTCGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLFIQRQESQLGIKDGMWRKSQ*RGMVVD Trigger: GTCAACGACCATGCCCCTGCACTGGCTCTTCCTCCA...CATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | GAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGCACAGGCTGCCAGATaGAGGAAGAGCCAGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EIHSLDACFSYRGKSHNWAQAAR*RKSQCR Trigger: CCTGCACTGGCTCTTCCTCCATCTGGCAGCCTGTGC...CCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | CAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCTGCCATGGATGGCTCACGTTAATCTaGCTGACGCTCCAGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSLGPHRDDLLEFICHGWLTLI*LTLQFR Trigger: CCGGAACTGGAGCGTCAGCCAGATTAACGTGAGCCA...TCCATGGCAGATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | CTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCCTTCATCTCCCAGGCTaGACAGAATGGAGCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLTQSSLGPHRDDLLEFILHLPG*TEWSSA Trigger: CGCTGAGCTCCATTCTGTCCAGCCTGGGAGATGAAG...GATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | ATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCCCTAGCAGGCCTGGATGCTGTAGATaGCACTGCCTAGCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IQRQESQLGIKDGMSPSRPGCCR*HCLAAV Trigger: AACAGCAGCTAGGCAGTGTCATCTACAGCATCCAGG...CCTGCTAGGGCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | CTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCTGTCCAGGGCTAGGATaGTGGCTCTGTACCAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFIQRQESQLGIKDGMSCPGLG*WLCTSR Trigger: ACGGCTGGTACAGAGCCATCATCCTAGCCCTGGACA...GCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | CGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGCAGGGGCATGGTCGTTaGCTTCTAGGATCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLFIQRQESQLGIKDGMQGHGR*LLGSRW Trigger: CCATCGAGATCCTAGAAGTCAACGACCATGCCCCTG...CATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | CGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGGGAGAACCTGAGGGCTaGATTGTCTGTCTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLLFIQRQESQLGIKDGMGEPEG*IVCLWV Trigger: GACCCAGAGACAGACAATGCAGCCCTCAGGTTCTCC...CATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | GAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGAACTCAGGGCTGCCCTaGTCCAGGATGGAGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: EIHSLDACFSYRGKSHNWNSGLP*SRMENL Trigger: CAGGTTCTCCATCCTGGAGCAGGGCAGCCCTGAGTT...CCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | CTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCTGTCATCTATGGAGATaGTGGCCGAGGCTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFIQRQESQLGIKDGMSCHLWR*WPRLWQ Trigger: CTGCCACAGCCTCGGCCATCATCTCCATAGATGACA...GCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | AGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGAGAACTCATCCTTGGTaGACTCGGGGGCATTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RRLLFIQRQESQLGIKDGRTHPW*TRGHCR Trigger: ACGACAATGCCCCCGAGTTCACCAAGGATGAGTTCT...CCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | AGTATGCTTTTAATTGAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCCTCTCGCTGCTGGGGTaGCTCCCCAGAGTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMLLIEIHSLDACFSYRGLSLLG*LPRVLE Trigger: CTCCAGGACTCTGGGGAGCCACCCCAGCAGCGAGAG...GCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTCAATTAAAAGCATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | CTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCCCTCCTCGTAGTCATAGATaGGAGCTGTGTCGTAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFIQRQESQLGIKDGMSPPRSHR*ELCRRE Trigger: CTCCCTACGACACAGCTCTCATCTATGACTACGAGG...AGGGCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR GCA 90 bp | CTCCTGACTCAGTCCTCTCTTGGACCTCACAGAGATGACCTCCTTGAGTTTATCGACATGTCTGCCACTTaGAAGGTCAGATTATACACA | + |
|
Preference number: 4 (lower is better) Translates to: LLTQSSLGPHRDDLLEFIDMSAT*KVRLYT Trigger: TGTGTATAATCTGACCTTGCAAGTGGCAGACATGTC...GATAAACTCAAGGAGGTCATCTCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CCA 90 bp | AGTATGCTTTTAATTGAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCCCAGATCTGGTACTCTaGGGTTCAGCTGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SMLLIEIHSLDACFSYRGPDLVL*GSAGSG Trigger: TCCACTTCCAGCTGAACCCCAGAGTACCAGATCTGG...GCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTCAATTAAAAGCATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR TCA 90 bp | AGTATGCTTTTAATTGAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCAGTCTTTGGAGTAGCTaGTTCTCTGCAGCTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMLLIEIHSLDACFSYRGSLWSS*FSAAVL Trigger: CAGAACAGCTGCAGAGAATCAGCTACTCCAAAGACT...GCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTCAATTAAAAGCATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 90 bp | TGCCCGGCGCCAGGGGTACAGGGTGCTGGGTTTGGGCTCAGGGACTaGCCAGGACAGGCCAAGGCTCTGGGCAAGCAGCCCGAGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CPAPGVQGAGFGLRD*PGQAKALGKQPEGE Trigger: CTCGCCCTCGGGCTGCTTGCCCAGAGCCTTGGCCTGTCCTGGGCAGTCCCTGAGCCCAAACCCAGCACCCTGTACCCCTGGCGCCGGGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 90 bp | GGCCTGGGGCTGATGCCCGGCGCCAGGGGTACAGGGTGCTGGGTTTaGGCTCAGGGACTGCCCAGGACAGGCCAAGGCTCTGGGCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLGLMPGARGTGCWV*AQGLPRTGQGSGQA Trigger: TGCTTGCCCAGAGCCTTGGCCTGTCCTGGGCAGTCCCTGAGCCCAAACCCAGCACCCTGTACCCCTGGCGCCGGGCATCAGCCCCAGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 90 bp | ACTAATGGGTGGGATGACCCAGGCTCTCCGCACACGGCCTGGGGCTaGTGCCCGGCGCCAGGGGTACAGGGTGCTGGGTTTGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TNGWDDPGSPHTAWG*CPAPGVQGAGFGLR Trigger: CCTGAGCCCAAACCCAGCACCCTGTACCCCTGGCGCCGGGCATCAGCCCCAGGCCGTGTGCGGAGAGCCTGGGTCATCCCACCCATTAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 90 bp | AGGGGGCATCCCTGCGCAGGGGTGGCCTGCCCAAAGAGCGACTTGTaGCCCTCGGCTCCACTGGGTGGCGCAGCTGGTTTATGTCGTACG | + |
|
Preference number: 5 (lower is better) Translates to: RGHPCAGVACPKSDL*PSAPLGGAAGLCRT Trigger: CGTACGACATAAACCAGCTGCGCCACCCAGTGGAGCCGAGGGCCACAAGTCGCTCTTTGGGCAGGCCACCCCTGCGCAGGGATGCCCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 90 bp | GGTGGCCTGCCCAAAGAGCGACTTGTGGCCCTCGGCTCCACTGGGTaGCGCAGCTGGTTTATGTCGTACGCATCCTGGTCCTCCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GGLPKERLVALGSTG*RSWFMSYASWSSSP Trigger: CGGGGAGGAGGACCAGGATGCGTACGACATAAACCAGCTGCGCCACCCAGTGGAGCCGAGGGCCACAAGTCGCTCTTTGGGCAGGCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 90 bp | GTCCTCAGTGGGTTCTCTGGAAACACTGGAGCTTCGTTGGTGTCCTaGACCCACACGCTGACCCTGGTCTGGCCCCGCCGAGCCCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLSGFSGNTGASLVS*THTLTLVWPRRARG Trigger: CCCTCGGGCTCGGCGGGGCCAGACCAGGGTCAGCGTGTGGGTTCAGGACACCAACGAAGCTCCAGTGTTTCCAGAGAACCCACTGAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 90 bp | CAGGCGATGCAGGCCCTCGGAGACCTGATGTCGGAGCCGCAAGCGTaGATGGCTCACGTTAATCTGGCTGACGCTCCAGTTCCGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QAMQALGDLMSEPQA*MAHVNLADAPVPAQ Trigger: CTGGGCCGGAACTGGAGCGTCAGCCAGATTAACGTGAGCCATGCACGCTTGCGGCTCCGACATCAGGTCTCCGAGGGCCTGCATCGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 90 bp | TCCGACCCACAGCGACACACGGTGACGTTCAGCGTTTGCTCTCGCTaGTGGGGTGGCTCCCCAGAGTCCTGGAGTAGCAGGCTCAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SDPQRHTVTFSVCSR*WGGSPESWSSRLRR Trigger: TCGCCTGAGCCTGCTACTCCAGGACTCTGGGGAGCCACCCCAGCAGCGAGAGCAAACGCTGAACGTCACCGTGTGTCGCTGTGGGTCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 90 bp | GACCCACAGCGACACACGGTGACGTTCAGCGTTTGCTCTCGCTGCTaGGGTGGCTCCCCAGAGTCCTGGAGTAGCAGGCTCAGGCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: DPQRHTVTFSVCSRC*GGSPESWSSRLRRC Trigger: GCATCGCCTGAGCCTGCTACTCCAGGACTCTGGGGAGCCACCCCAGCAGCGAGAGCAAACGCTGAACGTCACCGTGTGTCGCTGTGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 90 bp | CCCAAAGAGCGACTTGTGGCCCTCGGCTCCACTGGGTGGCGCAGCTaGTTTATGTCGTACGCATCCTGGTCCTCCTCCCCGCCTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PKERLVALGSTGWRS*FMSYASWSSSPPPC Trigger: GCAAGGAGGCGGGGAGGAGGACCAGGATGCGTACGACATAAACCAGCTGCGCCACCCAGTGGAGCCGAGGGCCACAAGTCGCTCTTTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 90 bp | CAGGGGTGGCCTGCCCAAAGAGCGACTTGTGGCCCTCGGCTCCACTaGGTGGCGCAGCTGGTTTATGTCGTACGCATCCTGGTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QGWPAQRATCGPRLH*VAQLVYVVRILVLL Trigger: GAGGAGGACCAGGATGCGTACGACATAAACCAGCTGCGCCACCCAGTGGAGCCGAGGGCCACAAGTCGCTCTTTGGGCAGGCCACCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 90 bp | ACCTCACGGTCCAGCCCCACTTGCACCGTGCGGATCTCTCCCGTGTaGTCGTCGATGCTGAAGAACTCAGGGCTGCCCTGCTCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TSRSSPTCTVRISPV*SSMLKNSGLPCSRM Trigger: CATCCTGGAGCAGGGCAGCCCTGAGTTCTTCAGCATCGACGAGCACACGGGAGAGATCCGCACGGTGCAAGTGGGGCTGGACCGTGAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 90 bp | CAAGTGCCATCCGACCCACAGCGACACACGGTGACGTTCAGCGTTTaGTCTCGCTGCTGGGGTGGCTCCCCAGAGTCCTGGAGTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QVPSDPQRHTVTFSV*SRCWGGSPESWSSR Trigger: CCTGCTACTCCAGGACTCTGGGGAGCCACCCCAGCAGCGAGAGCAAACGCTGAACGTCACCGTGTGTCGCTGTGGGTCGGATGGCACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 90 bp | GGATGTTGTCCCGAAGGTCCTCTTGTAGGCCATGCAACAGACTCTTaGCCCGGGAATGCCCCCGGAACCGTGTGCGGAGCGCGGCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCCPEGPLVGHATDS*PGNAPGTVCGARQA Trigger: TGCTTGCCGCGCTCCGCACACGGTTCCGGGGGCATTCCCGGGGCAAGAGTCTGTTGCATGGCCTACAAGAGGACCTTCGGGACAACATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 90 bp | AGGGTGAAGCAGGGCTCAGCACTCGCTGGGTCTGGATCCTGCCTGTaGCCCCGTCCACTTGCAGCCAGTCTTCTGGGTCGTAGTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVKQGSALAGSGSCL*PRPLAASLLGRSLW Trigger: CCAAAGACTACGACCCAGAAGACTGGCTGCAAGTGGACGGGGCCACAGGCAGGATCCAGACCCAGCGAGTGCTGAGCCCTGCTTCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 90 bp | CCGTCCTTCAAAAAGGGTGAAGCAGGGCTCAGCACTCGCTGGGTCTaGATCCTGCCTGTGGCCCCGTCCACTTGCAGCCAGTCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSFKKGEAGLSTRWV*ILPVAPSTCSQSSG Trigger: CCCAGAAGACTGGCTGCAAGTGGACGGGGCCACAGGCAGGATCCAGACCCAGCGAGTGCTGAGCCCTGCTTCACCCTTTTTGAAGGACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | CTCTGCCAGGACAGTGCTCCCTCTAGCTGCCTAGTCCATGCTCCAGATTCTCCCACGGTCCAGCCCCACTaGCACCGTGCGGATCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCQDSAPSSCLVHAPDSPTVQPH*HRADLS Trigger: GGAGAGATCCGCACGGTGCAAGTGGGGCTGGACCGT...GGGAGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 90 bp | GAAGAACTCAGGGCTGCCCTGCTCCAGGATGGAGAACCTGAGGGCTaGATTGTCTGTCTCTGGGTCGTCGGCATCTGTGGCCTCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EELRAALLQDGEPEG*IVCLWVVGICGLSP Trigger: AGGGCTGAGGCCACAGATGCCGACGACCCAGAGACAGACAATGCAGCCCTCAGGTTCTCCATCCTGGAGCAGGGCAGCCCTGAGTTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 90 bp | ATCTCTCCCGTGTGCTCGTCGATGCTGAAGAACTCAGGGCTGCCCTaGTCCAGGATGGAGAACCTGAGGGCTGCATTGTCTGTCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISPVCSSMLKNSGLP*SRMENLRAALSVSG Trigger: CCCAGAGACAGACAATGCAGCCCTCAGGTTCTCCATCCTGGAGCAGGGCAGCCCTGAGTTCTTCAGCATCGACGAGCACACGGGAGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 90 bp | CGGCCTCTGAACACATCCTGTAGGAAGGCTGGCCGGTTGTCATTTTaGTCCACCACAACGATCTCCAGGTCCGTGGGGTCCTCCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RPLNTSCRKAGRLSF*STTTISRSVGSSRV Trigger: TACCCTGGAGGACCCCACGGACCTGGAGATCGTTGTGGTGGATCAAAATGACAACCGGCCAGCCTTCCTACAGGATGTGTTCAGAGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 90 bp | AAGGTCAGATTATACACAGCCACCACCTCACGGTCCAGCCCCACTTaGACCGTGCGGATCTCTCCCGTGTGCTCGTCGATGCTGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KVRLYTATTSRSSPT*TVRISPVCSSMLKN Trigger: GTTCTTCAGCATCGACGAGCACACGGGAGAGATCCGCACGGTGCAAGTGGGGCTGGACCGTGAGGTGGTGGCTGTGTATAATCTGACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 90 bp | GTCTTCCACCTCGAGCCGTCCCACGTCCACTCCACTGACAGCCTCTaGAGCCTCCATAAAGAACTCATCCTTGGTGAACTCGGGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: VFHLEPSHVHSTDSL*SLHKELILGELGGI Trigger: AATGCCCCCGAGTTCACCAAGGATGAGTTCTTTATGGAGGCTGCAGAGGCTGTCAGTGGAGTGGACGTGGGACGGCTCGAGGTGGAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 90 bp | GGCTCCTTCAGCTATGCTCGTCCTCAGTGGGTTCTCTGGAAACACTaGAGCTTCGTTGGTGTCCTGAACCCACACGCTGACCCTGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSFSYARPQWVLWKH*SFVGVLNPHADPGL Trigger: CAGACCAGGGTCAGCGTGTGGGTTCAGGACACCAACGAAGCTCCAGTGTTTCCAGAGAACCCACTGAGGACGAGCATAGCTGAAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | ATGCTCCAGATTCTCCCACCACTCCTGACTCAGTCCTCTCTTGGACCTCACAGATACAGGGTGCTGGGTTaGGGCTCAGGGACTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MLQILPPLLTQSSLGPHRYRVLG*GSGTAQ Trigger: CTGGGCAGTCCCTGAGCCCAAACCCAGCACCCTGTA...TCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAGTGGTGGGAGAATCTGGAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 90 bp | GTCCGCAGCCTCCAAGCCATCACTGATGAAGTTGGCAATGTCAGATaGGCTGGTGGGAAGCACTCGATGTGGCTGTGGCACATAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VRSLQAITDEVGNVR*AGGKHSMWLWHIAE Trigger: TTCAGCTATGTGCCACAGCCACATCGAGTGCTTCCCACCAGCCCATCTGACATTGCCAACTTCATCAGTGATGGCTTGGAGGCTGCGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | GCACTCTGCCAGGACAGTGCTCCCTCTAGCTGCCTAGTCCATGCTCCAGATTCTCTCCTCCCCGCCTCCTaGCTCATCATAGTTAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ALCQDSAPSSCLVHAPDSLLPAS*LIIVKD Trigger: ATCCTTAACTATGATGAGCAAGGAGGCGGGGAGGAG...AGAATCTGGAGCATGGACTAGGCAGCTAGAGGGAGCACTGTCCTGGCAGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | CTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCCCTTGCCCAAAGAGCGACTaGTGGCCCTCGGCTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LFIQRQESQLGIKDGMSPCPKSD*WPSAPL Trigger: CAGTGGAGCCGAGGGCCACAAGTCGCTCTTTGGGCA...AGGGCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | ATGCTCCAGATTCTCCCACCACTCCTGACTCAGTCCTCTCTTGGACCTCACAGATGGCCGGTTGTCATTTaGATCCACCACAACGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: MLQILPPLLTQSSLGPHRWPVVI*IHHNDL Trigger: GAGATCGTTGTGGTGGATCAAAATGACAACCGGCCA...TCTGTGAGGTCCAAGAGAGGACTGAGTCAGGAGTGGTGGGAGAATCTGGAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | CGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAACCTGAGGGCTGCATaGTCTGTCTCTGGGTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: RLLFIQRQESQLGIKDGMNLRAA*SVSGSS Trigger: CGACGACCCAGAGACAGACAATGCAGCCCTCAGGTT...CATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | CTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCCCTGCAGGGGCATGGTCGTaGACTTCTAGGATCTCGATG | + |
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Preference number: 5 (lower is better) Translates to: LFIQRQESQLGIKDGMSPAGAWS*TSRISM Trigger: CATCGAGATCCTAGAAGTCAACGACCATGCCCCTGC...AGGGCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | AGTATGCTTTTAATTGAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCTGTGGCCCCGTCCACTaGCAGCCAGTCTTCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: SMLLIEIHSLDACFSYRGCGPVH*QPVFWV Trigger: GACCCAGAAGACTGGCTGCAAGTGGACGGGGCCACA...GCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTCAATTAAAAGCATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | CTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCCTAGGAGGAATGGCATaGTCCAGGGCTAGGATGATG | + |
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Preference number: 5 (lower is better) Translates to: LLFIQRQESQLGIKDGMSLGGMA*SRARMM Trigger: CATCATCCTAGCCCTGGACAATGCCATTCCTCCTAG...GCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | CTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCCCTCTGCCTAGCTGCTGTTaGTCAGACTTGATCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: LFIQRQESQLGIKDGMSPLPSCC*SDLICT Trigger: TGTGCAGATCAAGTCTGACAAACAGCAGCTAGGCAG...AGGGCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | GAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCAAGAGTCACAACTGGTCGGGGGCATTGTCGTaGATGTCATCTATGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: EIHSLDACFSYRGKSHNWSGALS*MSSMEM Trigger: CATCTCCATAGATGACATCAACGACAATGCCCCCGA...CCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | CTGCTTTTCATACAGAGGCAAGAGTCACAACTGGGAATCAAAGATGGGATGAGCATAAAGAACTCATCCTaGGTGAACTCGGGGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: LLFIQRQESQLGIKDGMSIKNSS*VNSGAL Trigger: CAATGCCCCCGAGTTCACCAAGGATGAGTTCTTTAT...GCTCATCCCATCTTTGATTCCCAGTTGTGACTCTTGCCTCTGTATGAAAAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS-3UTR CAA 90 bp | AGTATGCTTTTAATTGAAATCCACTCTTTAGACGCCTGCTTTTCATACAGAGGCCGACATGTCTGCCACTaGCAAGGTCAGATTATACAC | + |
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Preference number: 5 (lower is better) Translates to: SMLLIEIHSLDACFSYRGRHVCH*QGQIIH Trigger: GTGTATAATCTGACCTTGCAAGTGGCAGACATGTCG...GCCTCTGTATGAAAAGCAGGCGTCTAAAGAGTGGATTTCAATTAAAAGCATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 72 bp | TGGGATGACCCAGGCTCTCCGCACACGGCCTGGGGCTaGTGCCCGGCGCCAGGGGTACAGGGTGCTGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: WDDPGSPHTAWG*CPAPGVQGAGF Trigger: AAACCCAGCACCCTGTACCCCTGGCGCCGGGCATCAGCCCCAGGCCGTGTGCGGAGAGCCTGGGTCATCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 72 bp | CATCCCTGCGCAGGGGTGGCCTGCCCAAAGAGCGACTaGTGGCCCTCGGCTCCACTGGGTGGCGCAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HPCAGVACPKSD*WPSAPLGGAAG Trigger: ACCAGCTGCGCCACCCAGTGGAGCCGAGGGCCACAAGTCGCTCTTTGGGCAGGCCACCCCTGCGCAGGGATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 72 bp | CCCTGCGCAGGGGTGGCCTGCCCAAAGAGCGACTTGTaGCCCTCGGCTCCACTGGGTGGCGCAGCTGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PCAGVACPKSDL*PSAPLGGAAGL Trigger: TAAACCAGCTGCGCCACCCAGTGGAGCCGAGGGCCACAAGTCGCTCTTTGGGCAGGCCACCCCTGCGCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 72 bp | TTGGGCTCAGGGACTGCCCAGGACAGGCCAAGGCTCTaGGCAAGCAGCCCGAGGGCGAGGAGCAGAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LGSGTAQDRPRL*ASSPRARSRAE Trigger: TTCTGCTCTGCTCCTCGCCCTCGGGCTGCTTGCCCAGAGCCTTGGCCTGTCCTGGGCAGTCCCTGAGCCCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 72 bp | GTTTGCTCTCGCTGCTGGGGTGGCTCCCCAGAGTCCTaGAGTAGCAGGCTCAGGCGATGCAGGCCCTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: VCSRCWGGSPES*SSRLRRCRPSE Trigger: CTCCGAGGGCCTGCATCGCCTGAGCCTGCTACTCCAGGACTCTGGGGAGCCACCCCAGCAGCGAGAGCAAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 72 bp | TGGTGGGAAGCACTCGATGTGGCTGTGGCACATAGCTaGAGGGGGCATCCCTGCGCAGGGGTGGCCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: WWEALDVAVAHS*RGHPCAGVACP Trigger: TGGGCAGGCCACCCCTGCGCAGGGATGCCCCCTTCAGCTATGTGCCACAGCCACATCGAGTGCTTCCCACCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 72 bp | TCCGACCCACAGCGACACACGGTGACGTTCAGCGTTTaGTCTCGCTGCTGGGGTGGCTCCCCAGAGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SDPQRHTVTFSV*SRCWGGSPESW Trigger: CCAGGACTCTGGGGAGCCACCCCAGCAGCGAGAGCAAACGCTGAACGTCACCGTGTGTCGCTGTGGGTCGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 72 bp | CCCGAAGGTCCTCTTGTAGGCCATGCAACAGACTCTTaGCCCGGGAATGCCCCCGGAACCGTGTGCGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PEGPLVGHATDS*PGNAPGTVCGA Trigger: CGCTCCGCACACGGTTCCGGGGGCATTCCCGGGGCAAGAGTCTGTTGCATGGCCTACAAGAGGACCTTCGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 72 bp | GGCATCTGTGGCCTCAGCCCTGGTGACGAAGGTGCCTaGGATGGCACCCTCCAGGATGCGGCCTCTGAACAC | + |
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Preference number: 6 (lower is better) Translates to: GICGLSPGDEGA*DGTLQDAASEH Trigger: GTGTTCAGAGGCCGCATCCTGGAGGGTGCCATCCCAGGCACCTTCGTCACCAGGGCTGAGGCCACAGATGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 72 bp | GCAGGCAAGTGCCATCCGACCCACAGCGACACACGGTaGCGTTCAGCGTTTGCTCTCGCTGCTGGGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AGKCHPTHSDTR*RSAFALAAGVA Trigger: AGCCACCCCAGCAGCGAGAGCAAACGCTGAACGTCACCGTGTGTCGCTGTGGGTCGGATGGCACTTGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 72 bp | TCCAGCCCCACTTGCACCGTGCGGATCTCTCCCGTGTaGTCGTCGATGCTGAAGAACTCAGGGCTGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSPTCTVRISPV*SSMLKNSGLPC Trigger: GCAGGGCAGCCCTGAGTTCTTCAGCATCGACGAGCACACGGGAGAGATCCGCACGGTGCAAGTGGGGCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 72 bp | CGACACACGGTGACGTTCAGCGTTTGCTCTCGCTGCTaGGGTGGCTCCCCAGAGTCCTGGAGTAGCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: RHTVTFSVCSRC*GGSPESWSSRL Trigger: GAGCCTGCTACTCCAGGACTCTGGGGAGCCACCCCAGCAGCGAGAGCAAACGCTGAACGTCACCGTGTGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 72 bp | GTCAGATGGGCTGGTGGGAAGCACTCGATGTGGCTGTaGCACATAGCTGAAGGGGGCATCCCTGCGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VRWAGGKHSMWL*HIAEGGIPAQG Trigger: CCCCTGCGCAGGGATGCCCCCTTCAGCTATGTGCCACAGCCACATCGAGTGCTTCCCACCAGCCCATCTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 72 bp | TCCCGAAGGTCCTCTTGTAGGCCATGCAACAGACTCTaGCCCCGGGAATGCCCCCGGAACCGTGTGCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRRSSCRPCNRL*PRECPRNRVRS Trigger: GCTCCGCACACGGTTCCGGGGGCATTCCCGGGGCAAGAGTCTGTTGCATGGCCTACAAGAGGACCTTCGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 90 bp | AGGATGTTGTCCCGAAGGTCCTCTTGTAGGCCATGCAACAGACTCTaGCCCCGGGAATGCCCCCGGAACCGTGTGCGGAGCGCGGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: RMLSRRSSCRPCNRL*PRECPRNRVRSAAS Trigger: GCTTGCCGCGCTCCGCACACGGTTCCGGGGGCATTCCCGGGGCAAGAGTCTGTTGCATGGCCTACAAGAGGACCTTCGGGACAACATCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 90 bp | AACTCAGGGCTGCCCTGCTCCAGGATGGAGAACCTGAGGGCTGCATaGTCTGTCTCTGGGTCGTCGGCATCTGTGGCCTCAGCCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: NSGLPCSRMENLRAA*SVSGSSASVASALV Trigger: CACCAGGGCTGAGGCCACAGATGCCGACGACCCAGAGACAGACAATGCAGCCCTCAGGTTCTCCATCCTGGAGCAGGGCAGCCCTGAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 72 bp | GCACCGTGCGGATCTCTCCCGTGTGCTCGTCGATGCTaGAGAACTCAGGGCTGCCCTGCTCCAGGATGGAGA | + |
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Preference number: 6 (lower is better) Translates to: APCGSLPCARRC*RTQGCPAPGWR Trigger: TCTCCATCCTGGAGCAGGGCAGCCCTGAGTTCTTCAGCATCGACGAGCACACGGGAGAGATCCGCACGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 72 bp | GGGTTCTCTGGAAACACTGGAGCTTCGTTGGTGTCCTaGACCCACACGCTGACCCTGGTCTGGCCCCGCCGA | + |
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Preference number: 6 (lower is better) Translates to: GFSGNTGASLVS*THTLTLVWPRR Trigger: TCGGCGGGGCCAGACCAGGGTCAGCGTGTGGGTTCAGGACACCAACGAAGCTCCAGTGTTTCCAGAGAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 72 bp | AGGGCTGCCCTGCTCCAGGATGGAGAACCTGAGGGCTaGATTGTCTGTCTCTGGGTCGTCGGCATCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RAALLQDGEPEG*IVCLWVVGICG Trigger: GCCACAGATGCCGACGACCCAGAGACAGACAATGCAGCCCTCAGGTTCTCCATCCTGGAGCAGGGCAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 90 bp | GGCCGAGGCTGTGGCAGTGAGTCCGTCTCCCGACATGTCTGCCACTaGCAAGGTCAGATTATACACAGCCACCACCTCACGGTCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRGCGSESVSRHVCH*QGQIIHSHHLTVQP Trigger: GGGCTGGACCGTGAGGTGGTGGCTGTGTATAATCTGACCTTGCAAGTGGCAGACATGTCGGGAGACGGACTCACTGCCACAGCCTCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 90 bp | TGCCCATCAGGATCACCTTCAAGGATGGTGAACCTGGCCACCCAGTaGGGGGAACCAGGCAGGTCCTTGTCTTCCACCTCGAGCCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: CPSGSPSRMVNLATQ*GEPGRSLSSTSSRP Trigger: GGGACGGCTCGAGGTGGAAGACAAGGACCTGCCTGGTTCCCCCAACTGGGTGGCCAGGTTCACCATCCTTGAAGGTGATCCTGATGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 72 bp | AGGTGCCTGGGATGGCACCCTCCAGGATGCGGCCTCTaGACACATCCTGTAGGAAGGCTGGCCGGTTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: RCLGWHPPGCGL*THPVGRLAGCH Trigger: ATGACAACCGGCCAGCCTTCCTACAGGATGTGTTCAGAGGCCGCATCCTGGAGGGTGCCATCCCAGGCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 72 bp | TCCCTGCCACAGAGCCATCTCCCTCGTAGTCATAGATaGGAGCTGTGTCGTAGGGAGGCACGCTGGGGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SLPQSHLPRSHR*ELCRREARWGR Trigger: GCGACCCCAGCGTGCCTCCCTACGACACAGCTCTCATCTATGACTACGAGGGAGATGGCTCTGTGGCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 72 bp | TTATACACAGCCACCACCTCACGGTCCAGCCCCACTTaGACCGTGCGGATCTCTCCCGTGTGCTCGTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: LYTATTSRSSPT*TVRISPVCSSM Trigger: CATCGACGAGCACACGGGAGAGATCCGCACGGTGCAAGTGGGGCTGGACCGTGAGGTGGTGGCTGTGTATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 72 bp | CTGAAGCGGTCCGTCTTCTCGCGGTCCAGCGTGGCATaGAGGTACACCCTCCCGGTGAACTTGTCGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LKRSVFSRSSVA*RYTLPVNLSME Trigger: CTCCATCGACAAGTTCACCGGGAGGGTGTACCTCAATGCCACGCTGGACCGCGAGAAGACGGACCGCTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 72 bp | TGTCGGAGCCGCAAGCGTGCATGGCTCACGTTAATCTaGCTGACGCTCCAGTTCCGGCCCAGATCTGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: CRSRKRAWLTLI*LTLQFRPRSGT Trigger: AGTACCAGATCTGGGCCGGAACTGGAGCGTCAGCCAGATTAACGTGAGCCATGCACGCTTGCGGCTCCGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 72 bp | ATTATACACAGCCACCACCTCACGGTCCAGCCCCACTaGCACCGTGCGGATCTCTCCCGTGTGCTCGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: IIHSHHLTVQPH*HRADLSRVLVD Trigger: ATCGACGAGCACACGGGAGAGATCCGCACGGTGCAAGTGGGGCTGGACCGTGAGGTGGTGGCTGTGTATAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 72 bp | GACAGGGTGCCTGTGGCTGTGCTAGGAGGAATGGCATaGTCCAGGGCTAGGATGATGGCTCTGTACCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: DRVPVAVLGGMA*SRARMMALYQP Trigger: CGGCTGGTACAGAGCCATCATCCTAGCCCTGGACAATGCCATTCCTCCTAGCACAGCCACAGGCACCCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 90 bp | TTCTCGCGGTCCAGCGTGGCATTGAGGTACACCCTCCCGGTGAACTaGTCGATGGAGAAGACATTTCGGGGCTCCTCATCCACTCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FSRSSVALRYTLPVN*SMEKTFRGSSSTPG Trigger: TCCCGGAGTGGATGAGGAGCCCCGAAATGTCTTCTCCATCGACAAGTTCACCGGGAGGGTGTACCTCAATGCCACGCTGGACCGCGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 90 bp | GCTCAGCACTCGCTGGGTCTGGATCCTGCCTGTGGCCCCGTCCACTaGCAGCCAGTCTTCTGGGTCGTAGTCTTTGGAGTAGCTGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: AQHSLGLDPACGPVH*QPVFWVVVFGVADS Trigger: AGAATCAGCTACTCCAAAGACTACGACCCAGAAGACTGGCTGCAAGTGGACGGGGCCACAGGCAGGATCCAGACCCAGCGAGTGCTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 90 bp | GCCCTTAGCCTGAAGCGGTCCGTCTTCTCGCGGTCCAGCGTGGCATaGAGGTACACCCTCCCGGTGAACTTGTCGATGGAGAAGACATTT | + |
|
Preference number: 6 (lower is better) Translates to: ALSLKRSVFSRSSVA*RYTLPVNLSMEKTF Trigger: AAATGTCTTCTCCATCGACAAGTTCACCGGGAGGGTGTACCTCAATGCCACGCTGGACCGCGAGAAGACGGACCGCTTCAGGCTAAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 90 bp | CAAGGTCAGATTATACACAGCCACCACCTCACGGTCCAGCCCCACTaGCACCGTGCGGATCTCTCCCGTGTGCTCGTCGATGCTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QGQIIHSHHLTVQPH*HRADLSRVLVDAEE Trigger: TTCTTCAGCATCGACGAGCACACGGGAGAGATCCGCACGGTGCAAGTGGGGCTGGACCGTGAGGTGGTGGCTGTGTATAATCTGACCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS TCA 72 bp | CTGCCTGCAGCGGGGCCTCGTTTTGTACAGACACTCTaGGCTCATACTGCTCACGGCTCTCATAGTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPAAGPRFVQTL*AHTAHGSHSPG Trigger: CCCTGGACTATGAGAGCCGTGAGCAGTATGAGCTCAGAGTGTCTGTACAAAACGAGGCCCCGCTGCAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 72 bp | CCTGCCTGTGGCCCCGTCCACTTGCAGCCAGTCTTCTaGGTCGTAGTCTTTGGAGTAGCTGATTCTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PACGPVHLQPVF*VVVFGVADSLQ Trigger: CTGCAGAGAATCAGCTACTCCAAAGACTACGACCCAGAAGACTGGCTGCAAGTGGACGGGGCCACAGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS GCA 72 bp | TTAAGGATGTTGTCCCGAAGGTCCTCTTGTAGGCCATaGAACAGACTCTTGCCCCGGGAATGCCCCCGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LRMLSRRSSCRP*NRLLPRECPRN Trigger: GTTCCGGGGGCATTCCCGGGGCAAGAGTCTGTTGCATGGCCTACAAGAGGACCTTCGGGACAACATCCTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 72 bp | TCCAGCGTGGCATTGAGGTACACCCTCCCGGTGAACTaGTCGATGGAGAAGACATTTCGGGGCTCCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SSVALRYTLPVN*SMEKTFRGSSS Trigger: GGATGAGGAGCCCCGAAATGTCTTCTCCATCGACAAGTTCACCGGGAGGGTGTACCTCAATGCCACGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 72 bp | AGCTATGCTCGTCCTCAGTGGGTTCTCTGGAAACACTaGAGCTTCGTTGGTGTCCTGAACCCACACGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SYARPQWVLWKH*SFVGVLNPHAD Trigger: GTCAGCGTGTGGGTTCAGGACACCAACGAAGCTCCAGTGTTTCCAGAGAACCCACTGAGGACGAGCATAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CCA 72 bp | GGCTCCTTCAGCTATGCTCGTCCTCAGTGGGTTCTCTaGAAACACTGGAGCTTCGTTGGTGTCCTGAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSFSYARPQWVL*KHWSFVGVLNP Trigger: TGGGTTCAGGACACCAACGAAGCTCCAGTGTTTCCAGAGAACCCACTGAGGACGAGCATAGCTGAAGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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| CDS CAA 72 bp | TGTGGCAGTGAGTCCGTCTCCCGACATGTCTGCCACTaGCAAGGTCAGATTATACACAGCCACCACCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: CGSESVSRHVCH*QGQIIHSHHLT Trigger: CGTGAGGTGGTGGCTGTGTATAATCTGACCTTGCAAGTGGCAGACATGTCGGGAGACGGACTCACTGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034443.7 |
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