Pregenerated sensors for CDH13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031841Ensembl transcript IDs: ENSMUST00000117160.2
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGATCTGTGTCACCACAAGGACCATAGGACTGTGGGTCTGGGGTaGTACAGTGGCAGACTTGCCCATGGGAGAATAGTTCAGCCCTTA | + |
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Preference number: 1 (lower is better) Translates to: HDLCHHKDHRTVGLG*YSGRLAHGRIVQPL Trigger: TAAGGGCTGAACTATTCTCCCATGGGCAAGTCTGCCACTGTACCACCCCAGACCCACAGTCCTATGGTCCTTGTGGTGACACAGATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 90 bp | CAGGGACAGATAGGAACCCACCACACAGATGCGTGGGCGGAGCACTaGCTAGCAACATGTGGACACATCAGAAAAAGTAGTCATTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: QGQIGTHHTDAWAEH*LATCGHIRKSSHCS Trigger: GGAACAATGACTACTTTTTCTGATGTGTCCACATGTTGCTAGCCAGTGCTCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 90 bp | CAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTaGGCGGAGCACTGGCTAGCAACATGTGGACACATCAGAAAAAGT | + |
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Preference number: 1 (lower is better) Translates to: QIPIQGQIGTHHTDA*AEHWLATCGHIRKS Trigger: ACTTTTTCTGATGTGTCCACATGTTGCTAGCCAGTGCTCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR GCA 90 bp | AGCGTCCACATCCTCTGTCTAACCATCTCCAAAGCAGGTATCTCCTaGAGTCTTCTACACAAATACTGGGTCTATACACAGACAGATACC | + |
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Preference number: 1 (lower is better) Translates to: SVHILCLTISKAGIS*SLLHKYWVYTQTDT Trigger: GGTATCTGTCTGTGTATAGACCCAGTATTTGTGTAGAAGACTGCAGGAGATACCTGCTTTGGAGATGGTTAGACAGAGGATGTGGACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 90 bp | ACCATCTCCAAAGCAGGTATCTCCTGCAGTCTTCTACACAAATACTaGGTCTATACACAGACAGATACCCATACAGGGACAGATAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: TISKAGISCSLLHKY*VYTQTDTHTGTDRN Trigger: GTTCCTATCTGTCCCTGTATGGGTATCTGTCTGTGTATAGACCCAGTATTTGTGTAGAAGACTGCAGGAGATACCTGCTTTGGAGATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 90 bp | CGTAATGCGTGTGTACATGTGTGGGTAATAGATGTGCATACAAGATaGTGCTGTTGGTCTCCTCATAGGTACACCATGATGACATTTGTA | + |
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Preference number: 1 (lower is better) Translates to: RNACVHVWVIDVHTR*CCWSPHRYTMMTFV Trigger: TACAAATGTCATCATGGTGTACCTATGAGGAGACCAACAGCACCATCTTGTATGCACATCTATTACCCACACATGTACACACGCATTACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 90 bp | AAACATTTTGGTGTGAGCTTTGATGGTTCATTTACGGTTTGTCAATaGGAAGGTTACCCTAGTGGGAGCCGTGATGTTCTTCTTAACCTG | + |
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Preference number: 1 (lower is better) Translates to: KHFGVSFDGSFTVCQ*EGYPSGSRDVLLNL Trigger: CAGGTTAAGAAGAACATCACGGCTCCCACTAGGGTAACCTTCCCATTGACAAACCGTAAATGAACCATCAAAGCTCACACCAAAATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR TCA 90 bp | TTATTCTCAGCTTTGCGAACAACGGTAGTCACACGGAAGGGTACTTaGAAAACTACCTGGGCTTACTCTATTTTATGCCTGTATATAGGA | + |
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Preference number: 1 (lower is better) Translates to: LFSALRTTVVTRKGT*KTTWAYSILCLYIG Trigger: TCCTATATACAGGCATAAAATAGAGTAAGCCCAGGTAGTTTTTCAAGTACCCTTCCGTGTGACTACCGTTGTTCGCAAAGCTGAGAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 90 bp | TGTGTACATGTGTGGGTAATAGATGTGCATACAAGATGGTGCTGTTaGTCTCCTCATAGGTACACCATGATGACATTTGTACTTGTACAT | + |
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Preference number: 1 (lower is better) Translates to: CVHVWVIDVHTRWCC*SPHRYTMMTFVLVH Trigger: ATGTACAAGTACAAATGTCATCATGGTGTACCTATGAGGAGACCAACAGCACCATCTTGTATGCACATCTATTACCCACACATGTACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTTACCTTACCTTACCCTAGCTCCTGCTGGGCTCTGAAGCCCCAGGCCGGCAGCCATGGCATCTGGTaGTACTGGGGCGTGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: TLTLPYPSSCWALKPQAGSHGIW*YWGVVA Trigger: TGCCACCACGCCCCAGTACCACCAGATGCCATGGCT...GCCGGCCTGGGGCTTCAGAGCCCAGCAGGAGCTAGGGTAAGGTAAGGTAAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGGCGGAAAAGAAAACGGAGGGTaGGGGGCAGTTGAGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TDTHTGTDRNPPHRCVGGKENGG*GAVEAW Trigger: CCAGGCCTCAACTGCCCCTCACCCTCCGTTTTCTTT...TCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CCA 90 bp | GTACATGTGTGGGTAATAGATGTGCATACAAGATGGTGCTGTTGGTCTCCTCATCCCACCCCCAACCTCTaGACCTGCCTAGCTGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: VHVWVIDVHTRWCCWSPHPTPNL*TCLAGW Trigger: CCAACCAGCTAGGCAGGTCCAGAGGTTGGGGGTGGG...ATGAGGAGACCAACAGCACCATCTTGTATGCACATCTATTACCCACACATGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR TCA 90 bp | CATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCACTGTTGAGGCCTGGTTGTaGAGTTTGAGAGCTGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: HGRIVQPLASDGKMPCSTVEAWL*SLRAVN Trigger: GTTTACAGCTCTCAAACTTCACAACCAGGCCTCAAC...AGTGGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTACCCAACCTCTGGACCTaGCTAGCTGGTTGGTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: TAVESMFVPLCVGLKPLVPNLWT*LAGWSA Trigger: TGCTGACCAACCAGCTAGGCAGGTCCAGAGGTTGGG...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR TCA 90 bp | GTACATGTGTGGGTAATAGATGTGCATACAAGATGGTGCTGTTGGTCTCCTCATAGGGTGAGGGGCAGTTaGGGCCTGGTTGTGAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: VHVWVIDVHTRWCCWSPHRVRGS*GLVVKF Trigger: AAACTTCACAACCAGGCCTCAACTGCCCCTCACCCT...ATGAGGAGACCAACAGCACCATCTTGTATGCACATCTATTACCCACACATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR TCA 90 bp | GTACATGTGTGGGTAATAGATGTGCATACAAGATGGTGCTGTTGGTCTCCTCATAGAGGGCCACCACCATaGTCTGTGTCACCACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: VHVWVIDVHTRWCCWSPHRGPPP*SVSPQG Trigger: TCCTTGTGGTGACACAGATCATGGTGGTGGCCCTCT...ATGAGGAGACCAACAGCACCATCTTGTATGCACATCTATTACCCACACATGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTACTGGACCTGCCTAGCTaGTTGGTCAGCATTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: QTAVESMFVPLCVGLKPLLDLPS*LVSIQC Trigger: ACACTGAATGCTGACCAACCAGCTAGGCAGGTCCAG...TAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAATCCAGAGGGTTCCATTAATCAAAGGAGGCAGGAAGATGCTGTCAATTGGGTTGCTATGGCAACTTaGGAGTCAAGCTTCAGGCGT | + |
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Preference number: 2 (lower is better) Translates to: ANPEGSINQRRQEDAVNWVAMAT*ESSFRR Trigger: ACGCCTGAAGCTTGACTCCCAAGTTGCCATAGCAAC...CCAATTGACAGCATCTTCCTGCCTCCTTTGATTAATGGAACCCTCTGGATTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CCA 90 bp | AGCGTGTGGATCTCTGCCTACGTAATCTCACTACAACAGACGACATATGACCCTTTTTTCCTGTTGCTATaGCAACTTGGGAGTCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SVWISAYVISLQQTTYDPFFLLL*QLGSQA Trigger: AGCTTGACTCCCAAGTTGCCATAGCAACAGGAAAAA...AGGGTCATATGTCGTCTGTTGTAGTGAGATTACGTAGGCAGAGATCCACACGCT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CCA 90 bp | TCATTCCTTAGAAAACATTTTGGTGTGAGCTTTGATGGTTCATTTACGGTTTGTGGCATCTGGTGGTACTaGGGCGTGGTGGCAGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: SFLRKHFGVSFDGSFTVCGIWWY*GVVAVL Trigger: TAGGACTGCCACCACGCCCCAGTACCACCAGATGCC...ACAAACCGTAAATGAACCATCAAAGCTCACACCAAAATGTTTTCTAAGGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR TCA 90 bp | AGCGTGTGGATCTCTGCCTACGTAATCTCACTACAACAGACGACATATGACCCTTTTTGGTGTGAGCTTTaGTGGTTCATTTACGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: SVWISAYVISLQQTTYDPFWCEL*WFIYGL Trigger: CAAACCGTAAATGAACCATCAAAGCTCACACCAAAA...AGGGTCATATGTCGTCTGTTGTAGTGAGATTACGTAGGCAGAGATCCACACGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTAGATGTGCATACAAGATaGTGCTGTTGGTCTCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: TAVESMFVPLCVGLKPLVDVHTR*CCWSPH Trigger: ATGAGGAGACCAACAGCACCATCTTGTATGCACATC...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CAA 90 bp | ACACAGACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTaGAAACCTTTAGTAAGCCACAGCATTAAAATATACCAAGACACT | + |
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Preference number: 2 (lower is better) Translates to: TQTAVESMFVPLCVG*KPLVSHSIKIYQDT Trigger: AGTGTCTTGGTATATTTTAATGCTGTGGCTTACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGTCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTATTTTCTTTTTCCTGTTaGTATGGCAACTTGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: TAVESMFVPLCVGLKPLVFSFSC*YGNLGV Trigger: GACTCCCAAGTTGCCATAGCAACAGGAAAAAGAAAA...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCTTTGATGGTTCATTTACGGTTTGTCAATGGGAAGGTTACCCTAGTGGGCTTCTACACAAATACTaGGTCTATACACAGACAGAT | + |
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Preference number: 2 (lower is better) Translates to: VSFDGSFTVCQWEGYPSGLLHKY*VYTQTD Trigger: ATCTGTCTGTGTATAGACCCAGTATTTGTGTAGAAG...CCCACTAGGGTAACCTTCCCATTGACAAACCGTAAATGAACCATCAAAGCTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CAA 90 bp | TTTATTCTCAGCTTTGCGAACAACGGTAGTCACACGGAAGGGTACTaGAAAAACTACCTGGGCTTACTCTATTTTATGCCTGTATATAGG | + |
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Preference number: 2 (lower is better) Translates to: FILSFANNGSHTEGY*KNYLGLLYFMPVYR Trigger: CCTATATACAGGCATAAAATAGAGTAAGCCCAGGTAGTTTTTCAAGTACCCTTCCGTGTGACTACCGTTGTTCGCAAAGCTGAGAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR GCA 90 bp | TCATTCCTTAGAAAACATTTTGGTGTGAGCTTTGATGGTTCATTTACGGTTTGTAAGGAGGCAGGAAGATaGTGTCAATTGGTGAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: SFLRKHFGVSFDGSFTVCKEAGR*CQLVRY Trigger: GTACCTCACCAATTGACAGCATCTTCCTGCCTCCTT...ACAAACCGTAAATGAACCATCAAAGCTCACACCAAAATGTTTTCTAAGGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGACCATAGGACTGTGGGTCTGGGGTGGTACAGTGGCAGACTTGCCCATGGGGAGGGTGAGGGGCAGTaGAGGCCTGGTTGTGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: KDHRTVGLGWYSGRLAHGEGEGQ*RPGCEV Trigger: AACTTCACAACCAGGCCTCAACTGCCCCTCACCCTC...CCCATGGGCAAGTCTGCCACTGTACCACCCCAGACCCACAGTCCTATGGTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 72 bp | CCTTGCTCCACTCTTGGGCATAAGGACATCAAGCCATaGCATCTGGTGGTACTGGGGCGTGGTGGCAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PCSTLGHKDIKP*HLVVLGRGGSP Trigger: AGGACTGCCACCACGCCCCAGTACCACCAGATGCCATGGCTTGATGTCCTTATGCCCAAGAGTGGAGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 72 bp | ATACAGGGACAGATAGGAACCCACCACACAGATGCGTaGGCGGAGCACTGGCTAGCAACATGTGGACACATC | + |
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Preference number: 3 (lower is better) Translates to: IQGQIGTHHTDA*AEHWLATCGHI Trigger: GATGTGTCCACATGTTGCTAGCCAGTGCTCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR TCA 72 bp | CACTTACCTTACCTTACCCTAGCTCCTGCTGGGCTCTaGAGCCCCAGGCCGGCACTATCTTCATTCCTTAGA | + |
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Preference number: 3 (lower is better) Translates to: HLPYLTLAPAGL*SPRPALSSFLR Trigger: TCTAAGGAATGAAGATAGTGCCGGCCTGGGGCTTCAGAGCCCAGCAGGAGCTAGGGTAAGGTAAGGTAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR GCA 72 bp | TATACCAAGACACTTACCTTACCTTACCCTAGCTCCTaGTGGGCTCTGAAGCCCCAGGCCGGCACTATCTTC | + |
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Preference number: 3 (lower is better) Translates to: YTKTLTLPYPSS*WALKPQAGTIF Trigger: GAAGATAGTGCCGGCCTGGGGCTTCAGAGCCCAGCAGGAGCTAGGGTAAGGTAAGGTAAGTGTCTTGGTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 72 bp | ACCAAGACACTTACCTTACCTTACCCTAGCTCCTGCTaGGCTCTGAAGCCCCAGGCCGGCACTATCTTCATT | + |
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Preference number: 3 (lower is better) Translates to: TKTLTLPYPSSC*ALKPQAGTIFI Trigger: AATGAAGATAGTGCCGGCCTGGGGCTTCAGAGCCCAGCAGGAGCTAGGGTAAGGTAAGGTAAGTGTCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CAA 90 bp | ACACTTACCTTACCTTACCCTAGCTCCTGCTGGGCTCTGAAGCCCCAGGCCGGCTTTTTCTTTTTCCTGTaGCTATGGCAACTTGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: TLTLPYPSSCWALKPQAGFFFFL*LWQLGS Trigger: ACTCCCAAGTTGCCATAGCAACAGGAAAAAGAAAAA...GCCGGCCTGGGGCTTCAGAGCCCAGCAGGAGCTAGGGTAAGGTAAGGTAAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CAA 90 bp | AATGAAACTGCAAAGAAAACGGAGGGTGAGGGGCAGTTGAGGCCTGGTTGTGAATGTTGCTATGGCAACTaGGGAGTCAAGCTTCAGGCG | + |
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Preference number: 3 (lower is better) Translates to: NETAKKTEGEGQLRPGCECCYGN*GVKLQA Trigger: CGCCTGAAGCTTGACTCCCAAGTTGCCATAGCAACA...TTCACAACCAGGCCTCAACTGCCCCTCACCCTCCGTTTTCTTTGCAGTTTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CAA 90 bp | AGCGTGTGGATCTCTGCCTACGTAATCTCACTACAACAGACGACATATGACCCTCCACTGTGTGTGGGGTaGAAACCTTTAGTAAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: SVWISAYVISLQQTTYDPPLCVG*KPLVSH Trigger: GTGGCTTACTAAAGGTTTCAACCCCACACACAGTGG...AGGGTCATATGTCGTCTGTTGTAGTGAGATTACGTAGGCAGAGATCCACACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 72 bp | GGTGTGAGCTTTGATGGTTCATTTACGGTTTGTCAATaGGAAGGTTACCCTAGTGGGAGCCGTGATGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: GVSFDGSFTVCQ*EGYPSGSRDVL Trigger: AAGAACATCACGGCTCCCACTAGGGTAACCTTCCCATTGACAAACCGTAAATGAACCATCAAAGCTCACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR TCA 72 bp | GCTTTGCGAACAACGGTAGTCACACGGAAGGGTACTTaGAAAACTACCTGGGCTTACTCTATTTTATGCCTG | + |
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Preference number: 3 (lower is better) Translates to: ALRTTVVTRKGT*KTTWAYSILCL Trigger: CAGGCATAAAATAGAGTAAGCCCAGGTAGTTTTTCAAGTACCCTTCCGTGTGACTACCGTTGTTCGCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR TCA 72 bp | GTTACCCTAGTGGGAGCCGTGATGTTCTTCTTAACCTaGCATGCTCACAGGACAAAACTGAATTCCTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: VTLVGAVMFFLT*HAHRTKLNSFP Trigger: TGGAAAGGAATTCAGTTTTGTCCTGTGAGCATGTCAGGTTAAGAAGAACATCACGGCTCCCACTAGGGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR GCA 72 bp | CCTAGTGGGAGCCGTGATGTTCTTCTTAACCTGACATaGTCACAGGACAAAACTGAATTCCTTTCCAGACAT | + |
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Preference number: 3 (lower is better) Translates to: PSGSRDVLLNLT*SQDKTEFLSRH Trigger: ATGTCTGGAAAGGAATTCAGTTTTGTCCTGTGAGCATGTCAGGTTAAGAAGAACATCACGGCTCCCACTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR GCA 72 bp | ATCCTCTGTCTAACCATCTCCAAAGCAGGTATCTCCTaGAGTCTTCTACACAAATACTGGGTCTATACACAG | + |
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Preference number: 3 (lower is better) Translates to: ILCLTISKAGIS*SLLHKYWVYTQ Trigger: CTGTGTATAGACCCAGTATTTGTGTAGAAGACTGCAGGAGATACCTGCTTTGGAGATGGTTAGACAGAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR GCA 72 bp | GTACATGTGTGGGTAATAGATGTGCATACAAGATGGTaGTGTTGGTCTCCTCATAGGTACACCATGATGACA | + |
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Preference number: 3 (lower is better) Translates to: VHVWVIDVHTRW*CWSPHRYTMMT Trigger: TGTCATCATGGTGTACCTATGAGGAGACCAACAGCACCATCTTGTATGCACATCTATTACCCACACATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 72 bp | AAAGCAGGTATCTCCTGCAGTCTTCTACACAAATACTaGGTCTATACACAGACAGATACCCATACAGGGACA | + |
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Preference number: 3 (lower is better) Translates to: KAGISCSLLHKY*VYTQTDTHTGT Trigger: TGTCCCTGTATGGGTATCTGTCTGTGTATAGACCCAGTATTTGTGTAGAAGACTGCAGGAGATACCTGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR CCA 72 bp | GTGTGGGTAATAGATGTGCATACAAGATGGTGCTGTTaGTCTCCTCATAGGTACACCATGATGACATTTGTA | + |
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Preference number: 3 (lower is better) Translates to: VWVIDVHTRWCC*SPHRYTMMTFV Trigger: TACAAATGTCATCATGGTGTACCTATGAGGAGACCAACAGCACCATCTTGTATGCACATCTATTACCCACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTAGGAAGATGCTGTCAATaGGTGAGGTACAGATTAAAT | + |
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Preference number: 3 (lower is better) Translates to: TAVESMFVPLCVGLKPLVGRCCQ*VRYRLN Trigger: ATTTAATCTGTACCTCACCAATTGACAGCATCTTCC...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| 3UTR TCA 72 bp | CGGCACTATCTTCATTCCTTAGAAAACATTTTGGTGTaGGCTTTGATGGTTCATTTACGGTTTGTCAATGGG | + |
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Preference number: 3 (lower is better) Translates to: RHYLHSLENILV*ALMVHLRFVNG Trigger: CCCATTGACAAACCGTAAATGAACCATCAAAGCTCACACCAAAATGTTTTCTAAGGAATGAAGATAGTGCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS-3UTR TCA 90 bp | AGGGCCACCACCATGATCTGTGTCACCACAAGGACCATAGGACTGTGGGTCTGGGCAGGACGCACAGGGTaGGCGGAGTTCTCGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RATTMICVTTRTIGLWVWAGRTG*AEFSAA Trigger: TGCAGCCGAGAACTCCGCTCACCCTGTGCGTCCTGC...CCAGACCCACAGTCCTATGGTCCTTGTGGTGACACAGATCATGGTGGTGGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS-3UTR TCA 90 bp | ACACTTACCTTACCTTACCCTAGCTCCTGCTGGGCTCTGAAGCCCCAGGCCGGCGTCCAGCAGCGCAGGTaGCACCACGGTGACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLTLPYPSSCWALKPQAGVQQRR*HHGDNV Trigger: GACATTGTCACCGTGGTGTCACCTGCGCTGCTGGAC...GCCGGCCTGGGGCTTCAGAGCCCAGCAGGAGCTAGGGTAAGGTAAGGTAAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | ACACTTACCTTACCTTACCCTAGCTCCTGCTGGGCTCTGAAGCCCCAGGCCGGCCGTCGCTGTTCACCTTaGAGTGTGGGCTTGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TLTLPYPSSCWALKPQAGRRCSP*SVGLRP Trigger: AGGTCTCAAGCCCACACTTCAAGGTGAACAGCGACG...GCCGGCCTGGGGCTTCAGAGCCCAGCAGGAGCTAGGGTAAGGTAAGGTAAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | ACACTTACCTTACCTTACCCTAGCTCCTGCTGGGCTCTGAAGCCCCAGGCCGGCGCCCTCGTTGGTCTGTaGGTTGGTGTGGATCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLTLPYPSSCWALKPQAGALVGL*VGVDLE Trigger: TTCGAGATCCACACCAACCCACAGACCAACGAGGGC...GCCGGCCTGGGGCTTCAGAGCCCAGCAGGAGCTAGGGTAAGGTAAGGTAAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | AAGGACCATAGGACTGTGGGTCTGGGGTGGTACAGTGGCAGACTTGCCCATGGGTGTGGACAGTTGCCGTaGAGCTGGGGCCATAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KDHRTVGLGWYSGRLAHGCGQLP*SWGHRR Trigger: TCTCCTATGGCCCCAGCTCCACGGCAACTGTCCACA...CCCATGGGCAAGTCTGCCACTGTACCACCCCAGACCCACAGTCCTATGGTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | AAGGACCATAGGACTGTGGGTCTGGGGTGGTACAGTGGCAGACTTGCCCATGGGGCCATGTCTTCAGCATaGGGAGTCCTCGCATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KDHRTVGLGWYSGRLAHGAMSSA*GVLAWT Trigger: TGTCCATGCGAGGACTCCTCATGCTGAAGACATGGC...CCCATGGGCAAGTCTGCCACTGTACCACCCCAGACCCACAGTCCTATGGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | AAGGACCATAGGACTGTGGGTCTGGGGTGGTACAGTGGCAGACTTGCCCATGGGTGTGATGTGGACAGTTaGCGTGGAGCTGGGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: KDHRTVGLGWYSGRLAHGCDVDS*RGAGAI Trigger: TATGGCCCCAGCTCCACGGCAACTGTCCACATCACA...CCCATGGGCAAGTCTGCCACTGTACCACCCCAGACCCACAGTCCTATGGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | ACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGGCGGAGGTTGCCACTGTCGATaGCCAGGAACAGGGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDTHTGTDRNPPHRCVGGGCHCR*PGTGPC Trigger: ACACGGCCCTGTTCCTGGCCATCGACAGTGGCAACC...TCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | ACACCGAGGAGGGAGAGGGCCACCACCATGATCTGTGTCACCACAAGGACCATAGCTGGAATCCAGGGGTaGACTCCAGATCATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPRRERATTMICVTTRTIAGIQG*TPDHLQ Trigger: CTGCAGATGATCTGGAGTGCACCCCTGGATTCCAGC...TATGGTCCTTGTGGTGACACAGATCATGGTGGTGGCCCTCTCCCTCCTCGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | ACACCGAGGAGGGAGAGGGCCACCACCATGATCTGTGTCACCACAAGGACCATAAGTAGCCGGGTCATCTaGATCAAACGCTGTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: TPRRERATTMICVTTRTISSRVI*IKRCHP Trigger: CGGATGACAGCGTTTGATGCAGATGACCCGGCTACT...TATGGTCCTTGTGGTGACACAGATCATGGTGGTGGCCCTCTCCCTCCTCGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | ACACAGACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGAGTCCCGGTGCCAGTTaGAGGAGGGTTGCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQTDTHTGTDRNPPHRCVSPGAS*RRVATV Trigger: GACAGTGGCAACCCTCCTGCAACTGGCACCGGGACT...CACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGTCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCGACTTCCAGAGGCACTaGCCCTTCCAGAGTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHGRIVQPLASDGKMPCSDFQRH*PFQSFA Trigger: GGCAAAACTCTGGAAGGGCCAGTGCCTCTGGAAGTC...GGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCCATCGATCACGATGGTaGCTGTGGCTGTGCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHGRIVQPLASDGKMPCSHRSRW*LWLCLS Trigger: TGACAGGCACAGCCACAGCCACCATCGTGATCGATG...GGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | ACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGGCGGAAGAGCATGCCCTCGTTaGTCTGTGGGTTGGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TDTHTGTDRNPPHRCVGGRACPR*SVGWCG Trigger: TCCACACCAACCCACAGACCAACGAGGGCATGCTCT...TCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | CATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCACTCATAGTCCAGGGGCTTaGCCACAGAGAGCATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HGRIVQPLASDGKMPCSTHSPGA*PQRACP Trigger: AGGGCATGCTCTCTGTGGTCAAGCCCCTGGACTATG...AGTGGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | ACACAGACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGTGGTGGCTGTGGCTGTaGCTGTCAGTCCGACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQTDTHTGTDRNPPHRCVWWLWL*LSVRHP Trigger: TGGATGTCGGACTGACAGGCACAGCCACAGCCACCA...CACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGTCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | ACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGGCGGATCTCTGGGATCAAGATaGGGGACACCACAATGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TDTHTGTDRNPPHRCVGGSLGSR*GTPQWT Trigger: GGTCCATTGTGGTGTCCCCCATCTTGATCCCAGAGA...TCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCCACCACCATGATCTGTGTCACCACAAGGACCATAGGACTGTGGGTCTGGGACAATCACGAGTTCTaGCATGTCTTCAGCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RATTMICVTTRTIGLWVWDNHEF*HVFSMR Trigger: CCTCATGCTGAAGACATGGCAGAACTCGTGATTGTC...CCAGACCCACAGTCCTATGGTCCTTGTGGTGACACAGATCATGGTGGTGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | CAGACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTGACCAGGAGCACCTaGGACAGCAGGACGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTAVESMFVPLCVGLKPLVTRST*DSRTHR Trigger: CCTGTGCGTCCTGCTGTCCCAGGTGCTCCTGGTCAC...TAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCCCAGAGTTTTGCCACTaGCATCCGTGGTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AHGRIVQPLASDGKMPCSPEFCH*HPWFPH Trigger: ATGTGGAAACCACGGATGCCAGTGGCAAAACTCTGG...GGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | CATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCACTTCCAGGACTGTGATGTaGACAGTTGCCGTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HGRIVQPLASDGKMPCSTSRTVM*TVAVEL Trigger: CAGCTCCACGGCAACTGTCCACATCACAGTCCTGGA...AGTGGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGGCGGATGCCCTTGCAGTCATTaGAGGTCAAGTTTAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TDTHTGTDRNPPHRCVGGCPCSH*RSSLGQ Trigger: CTGTCCTAAACTTGACCTTCAATGACTGCAAGGGCA...TCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTACCACTCCCTTCCCGGTaGGCCGGAACTTGGACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAVESMFVPLCVGLKPLVPLPSR*AGTWTL Trigger: AAGGGTCCAAGTTCCGGCTCACCGGGAAGGGAGTGG...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | AAGGACCATAGGACTGTGGGTCTGGGGTGGTACAGTGGCAGACTTGCCCATGGGAATCCTGCCATATCTTaGGCTTCGATGATCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KDHRTVGLGWYSGRLAHGNPAIS*ASMISS Trigger: TGAACTGATCATCGAAGCTCAAGATATGGCAGGATT...CCCATGGGCAAGTCTGCCACTGTACCACCCCAGACCCACAGTCCTATGGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | TACAGATTAAATGAAACTGCAAAGAAAACGGAGGGTGAGGGGCAGTTGAGGCCTGGGTCTGTGTTGGGGTaGAGGTCCTTGTCCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YRLNETAKKTEGEGQLRPGSVLG*RSLSEA Trigger: GGCTTCGGACAAGGACCTTCACCCCAACACAGACCC...AGGCCTCAACTGCCCCTCACCCTCCGTTTTCTTTGCAGTTTCATTTAATCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | ACACAGACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGCCCTTCCAGAGTTTTaGCACTGGCATCCGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQTDTHTGTDRNPPHRCVALPEF*HWHPWF Trigger: AAACCACGGATGCCAGTGGCAAAACTCTGGAAGGGC...CACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGTCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS-3UTR GCA 90 bp | AGGGCCACCACCATGATCTGTGTCACCACAAGGACCATAGGACTGTGGGTCTGGTCCGACATCCAATCCTaGCATATCTTGAGCTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RATTMICVTTRTIGLWVWSDIQS*HILSFD Trigger: ATCGAAGCTCAAGATATGGCAGGATTGGATGTCGGA...CCAGACCCACAGTCCTATGGTCCTTGTGGTGACACAGATCATGGTGGTGGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | GTACATGTGTGGGTAATAGATGTGCATACAAGATGGTGCTGTTGGTCTCCTCATCAGTTGCCGTGGAGCTaGGGCCATAGGAGACGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VHVWVIDVHTRWCCWSPHQLPWS*GHRRRR Trigger: CCGACGTCTCCTATGGCCCCAGCTCCACGGCAACTG...ATGAGGAGACCAACAGCACCATCTTGTATGCACATCTATTACCCACACATGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | CAGACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTATGGGTGACCCTTCCATaGCATGGCCGATGTAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTAVESMFVPLCVGLKPLWVTLP*HGRCKG Trigger: GCCCTTACATCGGCCATGTCATGGAAGGGTCACCCA...TAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS-3UTR CCA 90 bp | CAGACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTATCCTGCAAGGAGCCCTaGATGTCTTTGCCCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: QTAVESMFVPLCVGLKPLSCKEP*MSLPPT Trigger: TGTCGGGGGCAAAGACATCCAGGGCTCCTTGCAGGA...TAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS-3UTR CCA 90 bp | CATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCACTGGACCTCTTTTGTCTTaGGACAGGAGATGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HGRIVQPLASDGKMPCSTGPLLS*DRRCPC Trigger: GCAAGGACATCTCCTGTCCCAAGACAAAAGAGGTCC...AGTGGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | ACACAGACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGTGGGGGACACCACAATaGACCTCTTTTGTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQTDTHTGTDRNPPHRCVWGTPQ*TSFVLG Trigger: TCCCAAGACAAAAGAGGTCCATTGTGGTGTCCCCCA...CACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGTCTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS-3UTR CCA 90 bp | ACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGGCGGAGGTCTGTTGTCGTTCTaGTCAATCACAATGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDTHTGTDRNPPHRCVGGGLLSF*SITMTS Trigger: GGAAGTCATTGTGATTGACCAGAACGACAACAGACC...TCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | AGCGTGTGGATCTCTGCCTACGTAATCTCACTACAACAGACGACATATGACCCTGTCTGTGGGTTGGTGTaGATCTCGAAGCTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVWISAYVISLQQTTYDPVCGLV*ISKLCP Trigger: TGGGCAGAGCTTCGAGATCCACACCAACCCACAGAC...AGGGTCATATGTCGTCTGTTGTAGTGAGATTACGTAGGCAGAGATCCACACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | CAGACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTATTGTCAGGCGTCTGCTaGCGGATGTTGTACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTAVESMFVPLCVGLKPLLSGVC*RMLYLR Trigger: CCTGAGGTACAACATCCGTCAGCAGACGCCTGACAA...TAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | CAGACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGCCTTGTTCAGATTCTaGAGAAGGCTCACGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTAVESMFVPLCVGLKPLALFRF*RRLTRA Trigger: CGCCCTCGTGAGCCTTCTTCAGAATCTGAACAAGGC...TAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | AGCGTGTGGATCTCTGCCTACGTAATCTCACTACAACAGACGACATATGACCCTGACGTCGGGTACCAGTaGGTCCTCATTCTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVWISAYVISLQQTTYDPDVGYQ*VLILHF Trigger: AAAGTGGAGAATGAGGACCCACTGGTACCCGACGTC...AGGGTCATATGTCGTCTGTTGTAGTGAGATTACGTAGGCAGAGATCCACACGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTTTGATGGTTCATTTACGGTTTGTCAATGGGAAGGTTACCCTAGTGGGGTGTACACACTGTTGTaGACGAATGGGGACTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSFDGSFTVCQWEGYPSGVYTLL*TNGDSR Trigger: CCGGGAGTCCCCATTCGTCCACAACAGTGTGTACAC...CCCACTAGGGTAACCTTCCCATTGACAAACCGTAAATGAACCATCAAAGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTAGTTCCTTTAGGGTCTTaGTCCACTCCCTTCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAVESMFVPLCVGLKPLVVPLGS*STPFPV Trigger: CACCGGGAAGGGAGTGGATCAAGACCCTAAAGGAAC...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | CAGACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTATCTGGTCAATCACAATaGCTTCCAGAGGCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTAVESMFVPLCVGLKPLSGQSQ*LPEALA Trigger: GGCCAGTGCCTCTGGAAGTCATTGTGATTGACCAGA...TAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTACATGGGTGGCTTCCCTaGATCTGTCACCATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TAVESMFVPLCVGLKPLVHGWLP*ICHHDG Trigger: CCCATCATGGTGACAGATTCAGGGAAGCCACCCATG...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTATCTCCTGCAGTCTTCTACACAAATACTGGGTCTATACACAGACAGATGCACTCCAGATCATCTaGAGACGTGACCAGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGISCSLLHKYWVYTQTDALQII*RRDQEH Trigger: GTGCTCCTGGTCACGTCTGCAGATGATCTGGAGTGC...ATCTGTCTGTGTATAGACCCAGTATTTGTGTAGAAGACTGCAGGAGATACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAACTGCAAAGAAAACGGAGGGTGAGGGGCAGTTGAGGCCTGGTTGTGAACGTTGCAGTCCACTTTaGAGTTCTTGCAAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NETAKKTEGEGQLRPGCERCSPL*SSCKST Trigger: TGTGCTCTTGCAAGAACTCCAAAGTGGACTGCAACG...TTCACAACCAGGCCTCAACTGCCCCTCACCCTCCGTTTTCTTTGCAGTTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | GCCCATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCCTTGGTGAATTTTGGTaGGTGATCATTTTTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: AHGRIVQPLASDGKMPCSLGEFW*VIIFVI Trigger: GATGACAAAAATGATCACTCACCAAAATTCACCAAG...GGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | GCAAATCCAGAGGGTTCCATTAATCAAAGGAGGCAGGAAGATGCTGTCAATTGGGACCTGACAATAAGCTaGGGAGAGAGAAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ANPEGSINQRRQEDAVNWDLTIS*GERRAA Trigger: TGCTGCTCTTCTCTCTCCTCAGCTTATTGTCAGGTC...CCAATTGACAGCATCTTCCTGCCTCCTTTGATTAATGGAACCCTCTGGATTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | GTACATGTGTGGGTAATAGATGTGCATACAAGATGGTGCTGTTGGTCTCCTCATCTGTCAGCAGCACACTaGCCACAGAGATGTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VHVWVIDVHTRWCCWSPHLSAAH*PQRCSP Trigger: AGGAGAACATCTCTGTGGGCAGTGTGCTGCTGACAG...ATGAGGAGACCAACAGCACCATCTTGTATGCACATCTATTACCCACACATGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTATCTCCTGCAGTCTTCTACACAAATACTGGGTCTATACACAGACAGATCCACTTTGGAGTTCTTaGAAGAGCACACCTGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: AGISCSLLHKYWVYTQTDPLWSS*KSTPAP Trigger: GGGTGCAGGTGTGCTCTTGCAAGAACTCCAAAGTGG...ATCTGTCTGTGTATAGACCCAGTATTTGTGTAGAAGACTGCAGGAGATACCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTTTGATGGTTCATTTACGGTTTGTCAATGGGAAGGTTACCCTAGTGGGGAACATGTTAGGAGATaGCTTGTCAGGCGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSFDGSFTVCQWEGYPSGEHVRR*LVRRLL Trigger: CAGCAGACGCCTGACAAGCCATCTCCTAACATGTTC...CCCACTAGGGTAACCTTCCCATTGACAAACCGTAAATGAACCATCAAAGCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTTTGATGGTTCATTTACGGTTTGTCAATGGGAAGGTTACCCTAGTGGGCTCCCTCCTCCACTGTaGCTTGAAACTCTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSFDGSFTVCQWEGYPSGLPPPL*LETLSW Trigger: CCAAGAAAGAGTTTCAAGCCACAGTGGAGGAGGGAG...CCCACTAGGGTAACCTTCCCATTGACAAACCGTAAATGAACCATCAAAGCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | AGCCGTGATGTTCTTCTTAACCTGACATGCTCACAGGACAAAACTGAATTCCTTGTCCGGGTAGAAGACTaGTCCCTCGTTGACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRDVLLNLTCSQDKTEFLVRVED*SLVDIQ Trigger: CTGGATGTCAACGAGGGACCAGTCTTCTACCCGGAC...AAGGAATTCAGTTTTGTCCTGTGAGCATGTCAGGTTAAGAAGAACATCACGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTATCTCCTGCAGTCTTCTACACAAATACTGGGTCTATACACAGACAGATATTGATGATGGTGTATaGAGCCCTCCAGGCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGISCSLLHKYWVYTQTDIDDGV*SPPGSC Trigger: ACAGGAGCCTGGAGGGCTGCATACACCATCATCAAT...ATCTGTCTGTGTATAGACCCAGTATTTGTGTAGAAGACTGCAGGAGATACCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTAGATACTCAGCCAGCCTaGTGGGTCCTTGTAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAVESMFVPLCVGLKPLVDTQPA*WVLVDR Trigger: TCTATCTACAAGGACCCAGCAGGCTGGCTGAGTATC...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | ACACAGACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGAAACTCTTTCTTGGTaGATTTTGGTGAGTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQTDTHTGTDRNPPHRCVETLSW*ILVSDH Trigger: ATGATCACTCACCAAAATTCACCAAGAAAGAGTTTC...CACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGTCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | TACAGATTAAATGAAACTGCAAAGAAAACGGAGGGTGAGGGGCAGTTGAGGCCTTATGAATCTCAAACTTaGAGGGGTCTGTGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YRLNETAKKTEGEGQLRPYESQT*RGLCWG Trigger: ACCCCAACACAGACCCCTTCAAGTTTGAGATTCATA...AGGCCTCAACTGCCCCTCACCCTCCGTTTTCTTTGCAGTTTCATTTAATCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | AATGAAACTGCAAAGAAAACGGAGGGTGAGGGGCAGTTGAGGCCTGGTTGTGAAAATTTAAAGATATCCTaGAAGGAGCCCTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NETAKKTEGEGQLRPGCENLKIS*KEPWMS Trigger: AGACATCCAGGGCTCCTTGCAGGATATCTTTAAATT...TTCACAACCAGGCCTCAACTGCCCCTCACCCTCCGTTTTCTTTGCAGTTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGGAGCCGTGATGTTCTTCTTAACCTGACATGCTCACAGGACAAAACTGAAGGGCAGGTTGTAGTTTaGCTTGTTCAGATTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSRDVLLNLTCSQDKTEGQVVV*LVQILK Trigger: CTTCAGAATCTGAACAAGGCAAACTACAACCTGCCC...TTCAGTTTTGTCCTGTGAGCATGTCAGGTTAAGAAGAACATCACGGCTCCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | TACAGATTAAATGAAACTGCAAAGAAAACGGAGGGTGAGGGGCAGTTGAGGCCTTATCTTGAGCTTCGATaGTCAGTTCATACTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YRLNETAKKTEGEGQLRPYLELR*SVHTWG Trigger: ACCCCAAGTATGAACTGATCATCGAAGCTCAAGATA...AGGCCTCAACTGCCCCTCACCCTCCGTTTTCTTTGCAGTTTCATTTAATCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGGAGGCAGGAAGATGCTGTCAATTGGTGAGGTACAGATTAAATGAAACTGAGTACCTGATAGTTTaGTGTTGCAGGGAGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKEAGRCCQLVRYRLNETEYLIV*CCRESG Trigger: CCCAGACTCCCTGCAACATCAAACTATCAGGTACTC...AGTTTCATTTAATCTGTACCTCACCAATTGACAGCATCTTCCTGCCTCCTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR TCA 90 bp | TCATTCCTTAGAAAACATTTTGGTGTGAGCTTTGATGGTTCATTTACGGTTTGTCAGGTGACACCACGGTaGCAATGTCTCCTTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFLRKHFGVSFDGSFTVCQVTPR*QCLLSR Trigger: CCGAGAAAGGAGACATTGTCACCGTGGTGTCACCTG...ACAAACCGTAAATGAACCATCAAAGCTCACACCAAAATGTTTTCTAAGGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCCTTAGAAAACATTTTGGTGTGAGCTTTGATGGTTCATTTACGGTTTGTGGGAGTCTGGGTCTGTaGCATTCACTGTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLRKHFGVSFDGSFTVCGSLGL*HSLSAA Trigger: TGCTGCTGACAGTGAATGCCACAGACCCAGACTCCC...ACAAACCGTAAATGAACCATCAAAGCTCACACCAAAATGTTTTCTAAGGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| 3UTR CAA 72 bp | GCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTaGAAACCTTTAGTAAGCCACAGCATTAAAATATAC | + |
|
Preference number: 4 (lower is better) Translates to: AVESMFVPLCVG*KPLVSHSIKIY Trigger: GTATATTTTAATGCTGTGGCTTACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCCTTAGAAAACATTTTGGTGTGAGCTTTGATGGTTCATTTACGGTTTGTATGTTGCAGGGAGTCTaGGTCTGTGGCATTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLRKHFGVSFDGSFTVCMLQGV*VCGIHC Trigger: ACAGTGAATGCCACAGACCCAGACTCCCTGCAACAT...ACAAACCGTAAATGAACCATCAAAGCTCACACCAAAATGTTTTCTAAGGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGGAGGCAGGAAGATGCTGTCAATTGGTGAGGTACAGATTAAATGAAACTGACAGGAGATGTCCTTaGAAATTTAAAGATATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKEAGRCCQLVRYRLNETDRRCP*KFKDIL Trigger: CAGGATATCTTTAAATTTGCAAGGACATCTCCTGTC...AGTTTCATTTAATCTGTACCTCACCAATTGACAGCATCTTCCTGCCTCCTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 90 bp | TCAGCAGAGTCCCGGTGCCAGTTGCAGGAGGGTTGCCACTGTCGATaGCCAGGAACAGGGCCGTGTACACACTGTTGTGGACGAATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAESRCQLQEGCHCR*PGTGPCTHCCGRMG Trigger: CCCCATTCGTCCACAACAGTGTGTACACGGCCCTGTTCCTGGCCATCGACAGTGGCAACCCTCCTGCAACTGGCACCGGGACTCTGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 90 bp | TTGCCACTGTCGATGGCCAGGAACAGGGCCGTGTACACACTGTTGTaGACGAATGGGGACTCCCGGTCCAACACAGCTGTGGTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LPLSMARNRAVYTLL*TNGDSRSNTAVVST Trigger: GGTGGACACCACAGCTGTGTTGGACCGGGAGTCCCCATTCGTCCACAACAGTGTGTACACGGCCCTGTTCCTGGCCATCGACAGTGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 90 bp | CCTCTAGGGTTATCAGCAGAGTCCCGGTGCCAGTTGCAGGAGGGTTaGCACTGTCGATGGCCAGGAACAGGGCCGTGTACACACTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLGLSAESRCQLQEG*HCRWPGTGPCTHCC Trigger: ACAACAGTGTGTACACGGCCCTGTTCCTGGCCATCGACAGTGGCAACCCTCCTGCAACTGGCACCGGGACTCTGCTGATAACCCTAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 90 bp | CCAGCCCCGTTGCAGTCCACTTTGGAGTTCTTGCAAGAGCACACCTaGACCCTGAGGTCCGTGATGTTCGTCATGGGTGGCTTCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PAPLQSTLEFLQEHT*TLRSVMFVMGGFPE Trigger: TTCAGGGAAGCCACCCATGACGAACATCACGGACCTCAGGGTGCAGGTGTGCTCTTGCAAGAACTCCAAAGTGGACTGCAACGGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 90 bp | GACAGTTGCCGTGGAGCTGGGGCCATAGGAGACGTCGGGTACCAGTaGGTCCTCATTCTCCACTTTGATCAGCAGGGTGTGAAAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DSCRGAGAIGDVGYQ*VLILHFDQQGVKGR Trigger: TCTGCCTTTCACACCCTGCTGATCAAAGTGGAGAATGAGGACCCACTGGTACCCGACGTCTCCTATGGCCCCAGCTCCACGGCAACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | ACACCGAGGAGGGAGAGGGCCACCACCATGATCTGTGTCACCACAAGGACCATAGAGCCCTGGATGTCTTaGCCCCCGACAATCACGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TPRRERATTMICVTTRTIEPWMS*PPTITS Trigger: ACTCGTGATTGTCGGGGGCAAAGACATCCAGGGCTC...TATGGTCCTTGTGGTGACACAGATCATGGTGGTGGCCCTCTCCCTCCTCGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS TCA 90 bp | ATGTCTTTGCCCCCGACAATCACGAGTTCTGCCATGTCTTCAGCATaGGGAGTCCTCGCATGGACAAACAGGGTCCTGCCCACCGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MSLPPTITSSAMSSA*GVLAWTNRVLPTAV Trigger: CACTGCGGTGGGCAGGACCCTGTTTGTCCATGCGAGGACTCCTCATGCTGAAGACATGGCAGAACTCGTGATTGTCGGGGGCAAAGACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | CATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCACTAGGGCCCCAGCCCCGTaGCAGTCCACTTTGGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HGRIVQPLASDGKMPCSTRAPAP*QSTLEF Trigger: GAACTCCAAAGTGGACTGCAACGGGGCTGGGGCCCT...AGTGGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 90 bp | CTGCAAGGAGCCCTGGATGTCTTTGCCCCCGACAATCACGAGTTCTaGCATGTCTTCAGCATGAGGAGTCCTCGCATGGACAAACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LQGALDVFAPDNHEF*HVFSMRSPRMDKQG Trigger: ACCCTGTTTGTCCATGCGAGGACTCCTCATGCTGAAGACATGGCAGAACTCGTGATTGTCGGGGGCAAAGACATCCAGGGCTCCTTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 90 bp | AGCATGCCCTCGTTGGTCTGTGGGTTGGTGTGGATCTCGAAGCTCTaGCCAGGATTTCCATTGATGATGGTGTATGCAGCCCTCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SMPSLVCGLVWISKL*PGFPLMMVYAALQA Trigger: AGCCTGGAGGGCTGCATACACCATCATCAATGGAAATCCTGGGCAGAGCTTCGAGATCCACACCAACCCACAGACCAACGAGGGCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS TCA 90 bp | GGCCTTCCCGGAAGATGGGTCTGTTGTCGTTCTGGTCAATCACAATaGCTTCCAGAGGCACTGGCCCTTCCAGAGTTTTGCCACTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLPGRWVCCRSGQSQ*LPEALALPEFCHWH Trigger: ATGCCAGTGGCAAAACTCTGGAAGGGCCAGTGCCTCTGGAAGTCATTGTGATTGACCAGAACGACAACAGACCCATCTTCCGGGAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 90 bp | GTGGATCTCGAAGCTCTGCCCAGGATTTCCATTGATGATGGTGTATaGAGCCCTCCAGGCTCCTGTGGTAGGGTCGTCTTTGTCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VDLEALPRISIDDGV*SPPGSCGRVVFVFH Trigger: GTGGAAGACAAAGACGACCCTACCACAGGAGCCTGGAGGGCTGCATACACCATCATCAATGGAAATCCTGGGCAGAGCTTCGAGATCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 90 bp | TCGCTATCGACTACCTTGCCGACATCTCTGGGGAAGGGCTGTCTCTaGTTCTCTGGGATCAAGATGGGGGACACCACAATGGACCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLSTTLPTSLGKGCL*FSGIKMGDTTMDLF Trigger: AAAGAGGTCCATTGTGGTGTCCCCCATCTTGATCCCAGAGAACCAGAGACAGCCCTTCCCCAGAGATGTCGGCAAGGTAGTCGATAGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 90 bp | GGCTTGACCACAGAGAGCATGCCCTCGTTGGTCTGTGGGTTGGTGTaGATCTCGAAGCTCTGCCCAGGATTTCCATTGATGATGGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GLTTESMPSLVCGLV*ISKLCPGFPLMMVY Trigger: ATACACCATCATCAATGGAAATCCTGGGCAGAGCTTCGAGATCCACACCAACCCACAGACCAACGAGGGCATGCTCTCTGTGGTCAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | GCCCATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCTGGACCTCTTTTGTCTaGGGACAGGAGATGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AHGRIVQPLASDGKMPCSWTSFV*GQEMSL Trigger: CAAGGACATCTCCTGTCCCAAGACAAAAGAGGTCCA...GGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | GCCCATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCTCTTCCACTGTCAAGTaGACAATGACCCCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AHGRIVQPLASDGKMPCSSSTVK*TMTPTA Trigger: AGCTGTGGGGGTCATTGTCAACTTGACAGTGGAAGA...GGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | ACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGGCGGACCTGATAGTTTGATGTaGCAGGGAGTCTGGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TDTHTGTDRNPPHRCVGGPDSLM*QGVWVC Trigger: ACAGACCCAGACTCCCTGCAACATCAAACTATCAGG...TCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | TACAGATTAAATGAAACTGCAAAGAAAACGGAGGGTGAGGGGCAGTTGAGGCCTGAGTCCCGGTGCCAGTaGCAGGAGGGTTGCCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: YRLNETAKKTEGEGQLRPESRCQ*QEGCHC Trigger: ACAGTGGCAACCCTCCTGCAACTGGCACCGGGACTC...AGGCCTCAACTGCCCCTCACCCTCCGTTTTCTTTGCAGTTTCATTTAATCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS TCA 90 bp | ACACTGCCTGTGTTCTCATTGATTCTGAAAGTTCCTTTAGGGTCTTaGTCCACTCCCTTCCCGGTGAGCCGGAACTTGGACCCTTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TLPVFSLILKVPLGS*STPFPVSRNLDPSG Trigger: ACCCGAAGGGTCCAAGTTCCGGCTCACCGGGAAGGGAGTGGATCAAGACCCTAAAGGAACTTTCAGAATCAATGAGAACACAGGCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 90 bp | GGGTCTGTTGTCGTTCTGGTCAATCACAATGACTTCCAGAGGCACTaGCCCTTCCAGAGTTTTGCCACTGGCATCCGTGGTTTCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: GSVVVLVNHNDFQRH*PFQSFATGIRGFHI Trigger: TATGTGGAAACCACGGATGCCAGTGGCAAAACTCTGGAAGGGCCAGTGCCTCTGGAAGTCATTGTGATTGACCAGAACGACAACAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | AGCGTGTGGATCTCTGCCTACGTAATCTCACTACAACAGACGACATATGACCCTGCCGTGTACACACTGTaGTGGACGAATGGGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVWISAYVISLQQTTYDPAVYTL*WTNGDS Trigger: GGAGTCCCCATTCGTCCACAACAGTGTGTACACGGC...AGGGTCATATGTCGTCTGTTGTAGTGAGATTACGTAGGCAGAGATCCACACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS TCA 90 bp | TGCCTGTCAGTCCGACATCCAATCCTGCCATATCTTGAGCTTCGATaGTCAGTTCATACTTGGGGTTTTCCAGAGTCTCCCGGTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLSVRHPILPYLELR*SVHTWGFPESPGPA Trigger: TGCTGGACCGGGAGACTCTGGAAAACCCCAAGTATGAACTGATCATCGAAGCTCAAGATATGGCAGGATTGGATGTCGGACTGACAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS TCA 90 bp | GCTGTGGCTGTGCCTGTCAGTCCGACATCCAATCCTGCCATATCTTaGGCTTCGATGATCAGTTCATACTTGGGGTTTTCCAGAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVAVPVSPTSNPAIS*ASMISSYLGFSRVS Trigger: GGAGACTCTGGAAAACCCCAAGTATGAACTGATCATCGAAGCTCAAGATATGGCAGGATTGGATGTCGGACTGACAGGCACAGCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 90 bp | CACGATGGTGGCTGTGGCTGTGCCTGTCAGTCCGACATCCAATCCTaGCATATCTTGAGCTTCGATGATCAGTTCATACTTGGGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HDGGCGCACQSDIQS*HILSFDDQFILGVF Trigger: GAAAACCCCAAGTATGAACTGATCATCGAAGCTCAAGATATGGCAGGATTGGATGTCGGACTGACAGGCACAGCCACAGCCACCATCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 90 bp | GACAATGTCTCCTTTCTCGGGATCGATGTAGAACATGTTAGGAGATaGCTTGTCAGGCGTCTGCTGACGGATGTTGTACCTCAGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DNVSFLGIDVEHVRR*LVRRLLTDVVPQES Trigger: GCTCTCCTGAGGTACAACATCCGTCAGCAGACGCCTGACAAGCCATCTCCTAACATGTTCTACATCGATCCCGAGAAAGGAGACATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 90 bp | GGTGTCCACCGTTCCATTGATGGGGTTGATACTCAGCCAGCCTGCTaGGTCCTTGTAGATAGAGTACCTGATAGTTTGATGTTGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVHRSIDGVDTQPAC*VLVDRVPDSLMLQG Trigger: TCCCTGCAACATCAAACTATCAGGTACTCTATCTACAAGGACCCAGCAGGCTGGCTGAGTATCAACCCCATCAATGGAACGGTGGACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | TCAAAGGAGGCAGGAAGATGCTGTCAATTGGTGAGGTACAGATTAAATGAAACTCCGGTGAGCCGGAACTaGGACCCTTCGGGTCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SKEAGRCCQLVRYRLNETPVSRN*DPSGLS Trigger: CGACAGACCCGAAGGGTCCAAGTTCCGGCTCACCGG...AGTTTCATTTAATCTGTACCTCACCAATTGACAGCATCTTCCTGCCTCCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | AATGAAACTGCAAAGAAAACGGAGGGTGAGGGGCAGTTGAGGCCTGGTTGTGAAAGTTCCTTTAGGGTCTaGATCCACTCCCTTCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: NETAKKTEGEGQLRPGCESSFRV*IHSLPG Trigger: ACCGGGAAGGGAGTGGATCAAGACCCTAAAGGAACT...TTCACAACCAGGCCTCAACTGCCCCTCACCCTCCGTTTTCTTTGCAGTTTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | ACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGGCGGAATGATCAGTTCATACTaGGGGTTTTCCAGAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TDTHTGTDRNPPHRCVGGMISSY*GFSRVS Trigger: GGAGACTCTGGAAAACCCCAAGTATGAACTGATCAT...TCCGCCCACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | GCCCATGGGAGAATAGTTCAGCCCTTAGCCTCTGATGGCAAGATGCCTTGCTCCCAATCCTGCCATATCTaGAGCTTCGATGATCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AHGRIVQPLASDGKMPCSQSCHI*SFDDQF Trigger: GAACTGATCATCGAAGCTCAAGATATGGCAGGATTG...GGAGCAAGGCATCTTGCCATCAGAGGCTAAGGGCTGAACTATTCTCCCATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 90 bp | GTGAGTGATCATTTTTGTCATCGATCACGATGGTGGCTGTGGCTGTaGCTGTCAGTCCGACATCCAATCCTGCCATATCTTGAGCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VSDHFCHRSRWWLWL*LSVRHPILPYLELR Trigger: TCGAAGCTCAAGATATGGCAGGATTGGATGTCGGACTGACAGGCACAGCCACAGCCACCATCGTGATCGATGACAAAAATGATCACTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 90 bp | TGTGGTGTCCACCGTTCCATTGATGGGGTTGATACTCAGCCAGCCTaGTGGGTCCTTGTAGATAGAGTACCTGATAGTTTGATGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CGVHRSIDGVDTQPA*WVLVDRVPDSLMLQ Trigger: CTGCAACATCAAACTATCAGGTACTCTATCTACAAGGACCCAGCAGGCTGGCTGAGTATCAACCCCATCAATGGAACGGTGGACACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | GTACATGTGTGGGTAATAGATGTGCATACAAGATGGTGCTGTTGGTCTCCTCATGGCCCTTCCAGAGTTTaGCCACTGGCATCCGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VHVWVIDVHTRWCCWSPHGPSRV*PLASVV Trigger: AACCACGGATGCCAGTGGCAAAACTCTGGAAGGGCC...ATGAGGAGACCAACAGCACCATCTTGTATGCACATCTATTACCCACACATGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | GCAAATCCAGAGGGTTCCATTAATCAAAGGAGGCAGGAAGATGCTGTCAATTGGGTGTCCACCGTTCCATaGATGGGGTTGATACTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ANPEGSINQRRQEDAVNWVSTVP*MGLILS Trigger: GCTGAGTATCAACCCCATCAATGGAACGGTGGACAC...CCAATTGACAGCATCTTCCTGCCTCCTTTGATTAATGGAACCCTCTGGATTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | TACAGATTAAATGAAACTGCAAAGAAAACGGAGGGTGAGGGGCAGTTGAGGCCTCCGTTGCAGTCCACTTaGGAGTTCTTGCAAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YRLNETAKKTEGEGQLRPPLQST*EFLQEH Trigger: GTGCTCTTGCAAGAACTCCAAAGTGGACTGCAACGG...AGGCCTCAACTGCCCCTCACCCTCCGTTTTCTTTGCAGTTTCATTTAATCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | ACACAGACAGATACCCATACAGGGACAGATAGGAACCCACCACACAGATGCGTGGGTTTCCACATACAGTaGATAAGTAGCGATCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQTDTHTGTDRNPPHRCVGFHIQ*ISSDRF Trigger: GAAACGATCGCTACTTATCAACTGTATGTGGAAACC...CACGCATCTGTGTGGTGGGTTCCTATCTGTCCCTGTATGGGTATCTGTCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | GCAAATCCAGAGGGTTCCATTAATCAAAGGAGGCAGGAAGATGCTGTCAATTGGGTGGTAGGGTCGTCTTaGTCTTCCACTGTCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ANPEGSINQRRQEDAVNWVVGSS*SSTVKL Trigger: CAACTTGACAGTGGAAGACAAAGACGACCCTACCAC...CCAATTGACAGCATCTTCCTGCCTCCTTTGATTAATGGAACCCTCTGGATTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | CAGACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTATGCCCAGGATTTCCATaGATGATGGTGTATGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QTAVESMFVPLCVGLKPLCPGFP*MMVYAA Trigger: GGCTGCATACACCATCATCAATGGAAATCCTGGGCA...TAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 90 bp | CTCTGGGATCAAGATGGGGGACACCACAATGGACCTCTTTTGTCTTaGGACAGGAGATGTCCTTGCAAATTTAAAGATATCCTGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LWDQDGGHHNGPLLS*DRRCPCKFKDILQG Trigger: TCCTTGCAGGATATCTTTAAATTTGCAAGGACATCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTGTCCCCCATCTTGATCCCAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTAAGCTTCTCGTTGCCCTaGCAGTCATTGAAGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TAVESMFVPLCVGLKPLVSFSLP*QSLKVK Trigger: CTTGACCTTCAATGACTGCAAGGGCAACGAGAAGCT...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | AGCCGTGATGTTCTTCTTAACCTGACATGCTCACAGGACAAAACTGAATTCCTTTCCACTTTGGAGTTCTaGCAAGAGCACACCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SRDVLLNLTCSQDKTEFLSTLEF*QEHTCT Trigger: GGTGCAGGTGTGCTCTTGCAAGAACTCCAAAGTGGA...AAGGAATTCAGTTTTGTCCTGTGAGCATGTCAGGTTAAGAAGAACATCACGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTACACAATGGACCTCTTTaGTCTTGGGACAGGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TAVESMFVPLCVGLKPLVHNGPL*SWDRRC Trigger: ACATCTCCTGTCCCAAGACAAAAGAGGTCCATTGTG...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | TCAAAGGAGGCAGGAAGATGCTGTCAATTGGTGAGGTACAGATTAAATGAAACTGTTCCATTGATGGGGTaGATACTCAGCCAGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SKEAGRCCQLVRYRLNETVPLMG*ILSQPA Trigger: AGCAGGCTGGCTGAGTATCAACCCCATCAATGGAAC...AGTTTCATTTAATCTGTACCTCACCAATTGACAGCATCTTCCTGCCTCCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTAGTATGGGCAGGTTGTAGTTaGCCTTGTTCAGATTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TAVESMFVPLCVGLKPLVWAGCS*PCSDSE Trigger: TTCAGAATCTGAACAAGGCAAACTACAACCTGCCCA...TACTAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCCTTAGAAAACATTTTGGTGTGAGCTTTGATGGTTCATTTACGGTTTGTTCGTTGGTCTGTGGGTaGGTGTGGATCTCGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFLRKHFGVSFDGSFTVCSLVCG*VWISKL Trigger: GAGCTTCGAGATCCACACCAACCCACAGACCAACGA...ACAAACCGTAAATGAACCATCAAAGCTCACACCAAAATGTTTTCTAAGGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | CAGACTGCAGTAGAAAGCATGTTTGTGCCACTGTGTGTGGGGTTGAAACCTTTATGGGTGTTGTTGATTTaGGAGATCTTCCAGACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: QTAVESMFVPLCVGLKPLWVLLI*EIFQTL Trigger: TAAAGTCTGGAAGATCTCCAAAATCAACAACACCCA...TAAAGGTTTCAACCCCACACACAGTGGCACAAACATGCTTTCTACTGCAGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCCTTAGAAAACATTTTGGTGTGAGCTTTGATGGTTCATTTACGGTTTGTACGAGGGCGTGGGTGTaGTTGATTTTGGAGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFLRKHFGVSFDGSFTVCTRAWV*LILEIF Trigger: GAAGATCTCCAAAATCAACAACACCCACGCCCTCGT...ACAAACCGTAAATGAACCATCAAAGCTCACACCAAAATGTTTTCTAAGGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 90 bp | GGGTTGCCACTGTCGATGGCCAGGAACAGGGCCGTGTACACACTGTaGTGGACGAATGGGGACTCCCGGTCCAACACAGCTGTGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLPLSMARNRAVYTL*WTNGDSRSNTAVVS Trigger: GGACACCACAGCTGTGTTGGACCGGGAGTCCCCATTCGTCCACAACAGTGTGTACACGGCCCTGTTCCTGGCCATCGACAGTGGCAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 90 bp | AAGCTGAGGCTGAGGTGCAGGGCCCCAGCCCCGTTGCAGTCCACTTaGGAGTTCTTGCAAGAGCACACCTGCACCCTGAGGTCCGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: KLRLRCRAPAPLQST*EFLQEHTCTLRSVM Trigger: CATCACGGACCTCAGGGTGCAGGTGTGCTCTTGCAAGAACTCCAAAGTGGACTGCAACGGGGCTGGGGCCCTGCACCTCAGCCTCAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 90 bp | AAGAGCAGCAGCAAGCTGAGGCTGAGGTGCAGGGCCCCAGCCCCGTaGCAGTCCACTTTGGAGTTCTTGCAAGAGCACACCTGCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KSSSKLRLRCRAPAP*QSTLEFLQEHTCTL Trigger: CAGGGTGCAGGTGTGCTCTTGCAAGAACTCCAAAGTGGACTGCAACGGGGCTGGGGCCCTGCACCTCAGCCTCAGCTTGCTGCTGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 72 bp | AGCAAGCTGAGGCTGAGGTGCAGGGCCCCAGCCCCGTaGCAGTCCACTTTGGAGTTCTTGCAAGAGCACACC | + |
|
Preference number: 6 (lower is better) Translates to: SKLRLRCRAPAP*QSTLEFLQEHT Trigger: GGTGTGCTCTTGCAAGAACTCCAAAGTGGACTGCAACGGGGCTGGGGCCCTGCACCTCAGCCTCAGCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 90 bp | CTGAGGTGCAGGGCCCCAGCCCCGTTGCAGTCCACTTTGGAGTTCTaGCAAGAGCACACCTGCACCCTGAGGTCCGTGATGTTCGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LRCRAPAPLQSTLEF*QEHTCTLRSVMFVM Trigger: CATGACGAACATCACGGACCTCAGGGTGCAGGTGTGCTCTTGCAAGAACTCCAAAGTGGACTGCAACGGGGCTGGGGCCCTGCACCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS TCA 72 bp | GGGGTTTTCCAGAGTCTCCCGGTCCAGCAGCGCAGGTaGCACCACGGTGACAATGTCTCCTTTCTCGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: GVFQSLPVQQRR*HHGDNVSFLGI Trigger: GATCCCGAGAAAGGAGACATTGTCACCGTGGTGTCACCTGCGCTGCTGGACCGGGAGACTCTGGAAAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 72 bp | TCCCTCGTTGACATCCAGGACTGTGATGTGGACAGTTaGCGTGGAGCTGGGGCCATAGGAGACGTCGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SLVDIQDCDVDS*RGAGAIGDVGY Trigger: GTACCCGACGTCTCCTATGGCCCCAGCTCCACGGCAACTGTCCACATCACAGTCCTGGATGTCAACGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 72 bp | CGTGGAGCTGGGGCCATAGGAGACGTCGGGTACCAGTaGGTCCTCATTCTCCACTTTGATCAGCAGGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RGAGAIGDVGYQ*VLILHFDQQGV Trigger: CACACCCTGCTGATCAAAGTGGAGAATGAGGACCCACTGGTACCCGACGTCTCCTATGGCCCCAGCTCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 72 bp | CAGGAACAGGGCCGTGTACACACTGTTGTGGACGAATaGGGACTCCCGGTCCAACACAGCTGTGGTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QEQGRVHTVVDE*GLPVQHSCGVH Trigger: GTGGACACCACAGCTGTGTTGGACCGGGAGTCCCCATTCGTCCACAACAGTGTGTACACGGCCCTGTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 72 bp | TCGATGGCCAGGAACAGGGCCGTGTACACACTGTTGTaGACGAATGGGGACTCCCGGTCCAACACAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SMARNRAVYTLL*TNGDSRSNTAV Trigger: CACAGCTGTGTTGGACCGGGAGTCCCCATTCGTCCACAACAGTGTGTACACGGCCCTGTTCCTGGCCATCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 72 bp | CTGTCGATGGCCAGGAACAGGGCCGTGTACACACTGTaGTGGACGAATGGGGACTCCCGGTCCAACACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSMARNRAVYTL*WTNGDSRSNTA Trigger: AGCTGTGTTGGACCGGGAGTCCCCATTCGTCCACAACAGTGTGTACACGGCCCTGTTCCTGGCCATCGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS TCA 72 bp | CCCCCGACAATCACGAGTTCTGCCATGTCTTCAGCATaGGGAGTCCTCGCATGGACAAACAGGGTCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPTITSSAMSSA*GVLAWTNRVLP Trigger: GGGCAGGACCCTGTTTGTCCATGCGAGGACTCCTCATGCTGAAGACATGGCAGAACTCGTGATTGTCGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 72 bp | TGTCCTCTAGGGTTATCAGCAGAGTCCCGGTGCCAGTaGCAGGAGGGTTGCCACTGTCGATGGCCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: CPLGLSAESRCQ*QEGCHCRWPGT Trigger: TGTTCCTGGCCATCGACAGTGGCAACCCTCCTGCAACTGGCACCGGGACTCTGCTGATAACCCTAGAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 90 bp | GTCTGTGGGTTGGTGTGGATCTCGAAGCTCTGCCCAGGATTTCCATaGATGATGGTGTATGCAGCCCTCCAGGCTCCTGTGGTAGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: VCGLVWISKLCPGFP*MMVYAALQAPVVGS Trigger: CGACCCTACCACAGGAGCCTGGAGGGCTGCATACACCATCATCAATGGAAATCCTGGGCAGAGCTTCGAGATCCACACCAACCCACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS TCA 72 bp | GAGTCTCCCGGTCCAGCAGCGCAGGTGACACCACGGTaGCAATGTCTCCTTTCTCGGGATCGATGTAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: ESPGPAAQVTPR*QCLLSRDRCRT Trigger: TGTTCTACATCGATCCCGAGAAAGGAGACATTGTCACCGTGGTGTCACCTGCGCTGCTGGACCGGGAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS TCA 72 bp | GGGTGTGAAAGGCAGAGATCTCATAGTCCAGGGGCTTaGCCACAGAGAGCATGCCCTCGTTGGTCTGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GCERQRSHSPGA*PQRACPRWSVG Trigger: ACCCACAGACCAACGAGGGCATGCTCTCTGTGGTCAAGCCCCTGGACTATGAGATCTCTGCCTTTCACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 72 bp | GCCCTGGATGTCTTTGCCCCCGACAATCACGAGTTCTaGCATGTCTTCAGCATGAGGAGTCCTCGCATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALDVFAPDNHEF*HVFSMRSPRMD Trigger: GTCCATGCGAGGACTCCTCATGCTGAAGACATGGCAGAACTCGTGATTGTCGGGGGCAAAGACATCCAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 72 bp | GTACCTCAGGAGAGCATTGTCAGTAGCCGGGTCATCTaGATCAAACGCTGTCATCCGCATCACCGTGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VPQESIVSSRVI*IKRCHPHHRGP Trigger: GGGACCACGGTGATGCGGATGACAGCGTTTGATGCAGATGACCCGGCTACTGACAATGCTCTCCTGAGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 90 bp | ATGATGGTGTATGCAGCCCTCCAGGCTCCTGTGGTAGGGTCGTCTTaGTCTTCCACTGTCAAGTTGACAATGACCCCCACAGCTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: MMVYAALQAPVVGSS*SSTVKLTMTPTAPS Trigger: GGAGGGAGCTGTGGGGGTCATTGTCAACTTGACAGTGGAAGACAAAGACGACCCTACCACAGGAGCCTGGAGGGCTGCATACACCATCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 90 bp | TCCAGGGGCTTGACCACAGAGAGCATGCCCTCGTTGGTCTGTGGGTaGGTGTGGATCTCGAAGCTCTGCCCAGGATTTCCATTGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: SRGLTTESMPSLVCG*VWISKLCPGFPLMM Trigger: CATCATCAATGGAAATCCTGGGCAGAGCTTCGAGATCCACACCAACCCACAGACCAACGAGGGCATGCTCTCTGTGGTCAAGCCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 72 bp | TTGCAGTCCACTTTGGAGTTCTTGCAAGAGCACACCTaGACCCTGAGGTCCGTGATGTTCGTCATGGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQSTLEFLQEHT*TLRSVMFVMGG Trigger: GCCACCCATGACGAACATCACGGACCTCAGGGTGCAGGTGTGCTCTTGCAAGAACTCCAAAGTGGACTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 72 bp | ACTACCTTGCCGACATCTCTGGGGAAGGGCTGTCTCTaGTTCTCTGGGATCAAGATGGGGGACACCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: TTLPTSLGKGCL*FSGIKMGDTTM Trigger: CATTGTGGTGTCCCCCATCTTGATCCCAGAGAACCAGAGACAGCCCTTCCCCAGAGATGTCGGCAAGGTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 72 bp | TTGACCACAGAGAGCATGCCCTCGTTGGTCTGTGGGTaGGTGTGGATCTCGAAGCTCTGCCCAGGATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LTTESMPSLVCG*VWISKLCPGFP Trigger: TGGAAATCCTGGGCAGAGCTTCGAGATCCACACCAACCCACAGACCAACGAGGGCATGCTCTCTGTGGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS GCA 72 bp | GAAGCTCTGCCCAGGATTTCCATTGATGATGGTGTATaGAGCCCTCCAGGCTCCTGTGGTAGGGTCGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: EALPRISIDDGV*SPPGSCGRVVF Trigger: AAAGACGACCCTACCACAGGAGCCTGGAGGGCTGCATACACCATCATCAATGGAAATCCTGGGCAGAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 72 bp | GTCGTTCTGGTCAATCACAATGACTTCCAGAGGCACTaGCCCTTCCAGAGTTTTGCCACTGGCATCCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VVLVNHNDFQRH*PFQSFATGIRG Trigger: ACCACGGATGCCAGTGGCAAAACTCTGGAAGGGCCAGTGCCTCTGGAAGTCATTGTGATTGACCAGAACGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 72 bp | ACAGAGAGCATGCCCTCGTTGGTCTGTGGGTTGGTGTaGATCTCGAAGCTCTGCCCAGGATTTCCATTGATG | + |
|
Preference number: 6 (lower is better) Translates to: TESMPSLVCGLV*ISKLCPGFPLM Trigger: CATCAATGGAAATCCTGGGCAGAGCTTCGAGATCCACACCAACCCACAGACCAACGAGGGCATGCTCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 72 bp | TATGCAGCCCTCCAGGCTCCTGTGGTAGGGTCGTCTTaGTCTTCCACTGTCAAGTTGACAATGACCCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: YAALQAPVVGSS*SSTVKLTMTPT Trigger: TGTGGGGGTCATTGTCAACTTGACAGTGGAAGACAAAGACGACCCTACCACAGGAGCCTGGAGGGCTGCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 72 bp | TTGGTGTGGATCTCGAAGCTCTGCCCAGGATTTCCATaGATGATGGTGTATGCAGCCCTCCAGGCTCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVWISKLCPGFP*MMVYAALQAPV Trigger: CACAGGAGCCTGGAGGGCTGCATACACCATCATCAATGGAAATCCTGGGCAGAGCTTCGAGATCCACACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 90 bp | GACACTGCCTGTGTTCTCATTGATTCTGAAAGTTCCTTTAGGGTCTaGATCCACTCCCTTCCCGGTGAGCCGGAACTTGGACCCTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: DTACVLIDSESSFRV*IHSLPGEPELGPFG Trigger: CCCGAAGGGTCCAAGTTCCGGCTCACCGGGAAGGGAGTGGATCAAGACCCTAAAGGAACTTTCAGAATCAATGAGAACACAGGCAGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CAA 90 bp | GGCTGTGGCTGTGCCTGTCAGTCCGACATCCAATCCTGCCATATCTaGAGCTTCGATGATCAGTTCATACTTGGGGTTTTCCAGAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GCGCACQSDIQSCHI*SFDDQFILGVFQSL Trigger: GAGACTCTGGAAAACCCCAAGTATGAACTGATCATCGAAGCTCAAGATATGGCAGGATTGGATGTCGGACTGACAGGCACAGCCACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 72 bp | TCTGGTTCTCTGGGATCAAGATGGGGGACACCACAATaGACCTCTTTTGTCTTGGGACAGGAGATGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGSLGSRWGTPQ*TSFVLGQEMSL Trigger: CAAGGACATCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTGTCCCCCATCTTGATCCCAGAGAACCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
||
| CDS CCA 72 bp | GATAGAGTACCTGATAGTTTGATGTTGCAGGGAGTCTaGGTCTGTGGCATTCACTGTCAGCAGCACACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DRVPDSLMLQGV*VCGIHCQQHTA Trigger: GGCAGTGTGCTGCTGACAGTGAATGCCACAGACCCAGACTCCCTGCAACATCAAACTATCAGGTACTCTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS GCA 72 bp | GGCTGTGGCTGTGCCTGTCAGTCCGACATCCAATCCTaGCATATCTTGAGCTTCGATGATCAGTTCATACTT | + |
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Preference number: 6 (lower is better) Translates to: GCGCACQSDIQS*HILSFDDQFIL Trigger: AAGTATGAACTGATCATCGAAGCTCAAGATATGGCAGGATTGGATGTCGGACTGACAGGCACAGCCACAGCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS GCA 72 bp | CATTTTTGTCATCGATCACGATGGTGGCTGTGGCTGTaGCTGTCAGTCCGACATCCAATCCTGCCATATCTT | + |
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Preference number: 6 (lower is better) Translates to: HFCHRSRWWLWL*LSVRHPILPYL Trigger: AAGATATGGCAGGATTGGATGTCGGACTGACAGGCACAGCCACAGCCACCATCGTGATCGATGACAAAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS GCA 72 bp | CACCGTTCCATTGATGGGGTTGATACTCAGCCAGCCTaGTGGGTCCTTGTAGATAGAGTACCTGATAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: HRSIDGVDTQPA*WVLVDRVPDSL Trigger: CAAACTATCAGGTACTCTATCTACAAGGACCCAGCAGGCTGGCTGAGTATCAACCCCATCAATGGAACGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS CCA 72 bp | TCCTTTCTCGGGATCGATGTAGAACATGTTAGGAGATaGCTTGTCAGGCGTCTGCTGACGGATGTTGTACCT | + |
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Preference number: 6 (lower is better) Translates to: SFLGIDVEHVRR*LVRRLLTDVVP Trigger: AGGTACAACATCCGTCAGCAGACGCCTGACAAGCCATCTCCTAACATGTTCTACATCGATCCCGAGAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS CCA 72 bp | GAGGTTTCTGGCATCATCGCAGACCTCAGCCACAGTTaGGTAAATGACAGGAGCGTTGTCATTAATGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: EVSGIIADLSHS*VNDRSVVINVL Trigger: GAGGACATTAATGACAACGCTCCTGTCATTTACCCAACTGTGGCTGAGGTCTGCGATGATGCCAGAAACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS TCA 72 bp | GTCCGACATCCAATCCTGCCATATCTTGAGCTTCGATaGTCAGTTCATACTTGGGGTTTTCCAGAGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VRHPILPYLELR*SVHTWGFPESP Trigger: GGGAGACTCTGGAAAACCCCAAGTATGAACTGATCATCGAAGCTCAAGATATGGCAGGATTGGATGTCGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS TCA 72 bp | GTGCCTGTCAGTCCGACATCCAATCCTGCCATATCTTaGGCTTCGATGATCAGTTCATACTTGGGGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VPVSPTSNPAIS*ASMISSYLGFS Trigger: GGAAAACCCCAAGTATGAACTGATCATCGAAGCTCAAGATATGGCAGGATTGGATGTCGGACTGACAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS CCA 72 bp | CGTTCCATTGATGGGGTTGATACTCAGCCAGCCTGCTaGGTCCTTGTAGATAGAGTACCTGATAGTTTGATG | + |
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Preference number: 6 (lower is better) Translates to: RSIDGVDTQPAC*VLVDRVPDSLM Trigger: CATCAAACTATCAGGTACTCTATCTACAAGGACCCAGCAGGCTGGCTGAGTATCAACCCCATCAATGGAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS CAA 72 bp | TGTGTTCTCATTGATTCTGAAAGTTCCTTTAGGGTCTaGATCCACTCCCTTCCCGGTGAGCCGGAACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: CVLIDSESSFRV*IHSLPGEPELG Trigger: TCCAAGTTCCGGCTCACCGGGAAGGGAGTGGATCAAGACCCTAAAGGAACTTTCAGAATCAATGAGAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS CAA 72 bp | TGGGTCCTTGTAGATAGAGTACCTGATAGTTTGATGTaGCAGGGAGTCTGGGTCTGTGGCATTCACTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: WVLVDRVPDSLM*QGVWVCGIHCQ Trigger: CTGACAGTGAATGCCACAGACCCAGACTCCCTGCAACATCAAACTATCAGGTACTCTATCTACAAGGACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS CAA 90 bp | CTGGTTCTCTGGGATCAAGATGGGGGACACCACAATGGACCTCTTTaGTCTTGGGACAGGAGATGTCCTTGCAAATTTAAAGATATCCTG | + |
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Preference number: 6 (lower is better) Translates to: LVLWDQDGGHHNGPL*SWDRRCPCKFKDIL Trigger: CAGGATATCTTTAAATTTGCAAGGACATCTCCTGTCCCAAGACAAAAGAGGTCCATTGTGGTGTCCCCCATCTTGATCCCAGAGAACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS TCA 72 bp | CTTTATCAGGGACTGTCTGTTTATGAATCTCAAACTTaGAGGGGTCTGTGTTGGGGTGAAGGTCCTTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: LYQGLSVYESQT*RGLCWGEGPCP Trigger: CGGACAAGGACCTTCACCCCAACACAGACCCCTTCAAGTTTGAGATTCATAAACAGACAGTCCCTGATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS CAA 72 bp | AATTTAAAGATATCCTGCAAGGAGCCCTGGATGTCTTaGCCCCCGACAATCACGAGTTCTGCCATGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NLKISCKEPWMS*PPTITSSAMSS Trigger: TGAAGACATGGCAGAACTCGTGATTGTCGGGGGCAAAGACATCCAGGGCTCCTTGCAGGATATCTTTAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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| CDS CAA 72 bp | TGTGCCTGTCAGTCCGACATCCAATCCTGCCATATCTaGAGCTTCGATGATCAGTTCATACTTGGGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: CACQSDIQSCHI*SFDDQFILGVF Trigger: GAAAACCCCAAGTATGAACTGATCATCGAAGCTCAAGATATGGCAGGATTGGATGTCGGACTGACAGGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117160.2 |
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