Pregenerated sensors for CDH12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040452Ensembl transcript IDs: ENSMUST00000075132.8, ENSMUST00000227496.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACGTAGAGACACTGTCTGCTTTCTTCCTCCTTATTTTCGACTCCTaGCAAGCCACCACAGCGGAGTGTTATGAACACCACTATAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: DVETLSAFFLLIFDS*QATTAECYEHHYKD Trigger: ATCCTTATAGTGGTGTTCATAACACTCCGCTGTGGTGGCTTGTCAGGAGTCGAAAATAAGGAGGAAGAAAGCAGACAGTGTCTCTACGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR TCA 90 bp | TCTGTTCTTAAAAGAACTGAGAGTCAGCATGTCACTATTGCTTCTTaGCGTAGAGACACTGTCTGCTTTCTTCCTCCTTATTTTCGACTC | + |
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Preference number: 1 (lower is better) Translates to: SVLKRTESQHVTIAS*RRDTVCFLPPYFRL Trigger: GAGTCGAAAATAAGGAGGAAGAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAGTTCTTTTAAGAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR TCA 90 bp | CAATGTCCATATACCAGCATAGAATTAAACAAACCGATATTTATTTaGTGTTGGAATTTGAGCCCCGAGGCCTCTCTTTATAAAGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: QCPYTSIELNKPIFI*CWNLSPEASLYKEG Trigger: TCCCTCTTTATAAAGAGAGGCCTCGGGGCTCAAATTCCAACATCAAATAAATATCGGTTTGTTTAATTCTATGCTGGTATATGGACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR TCA 90 bp | GCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTTCATaGGAAGGTTATTTTATTTCTTGTCAAGATACAAAGTGTAATAGT | + |
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Preference number: 1 (lower is better) Translates to: ASQISRLSWLLLATS*EGYFISCQDTKCNS Trigger: ACTATTACACTTTGTATCTTGACAAGAAATAAAATAACCTTCTCATGAAGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCTACACTCTTCCACCGTaGCGCCACATAGCTATCTTC | + |
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Preference number: 2 (lower is better) Translates to: LRVSMSLLLLDVETLSAFYTLPP*RHIAIF Trigger: GAAGATAGCTATGTGGCGTCACGGTGGAAGAGTGTA...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTAATATGAAGATCGTCCTTATGAGAAGAGAAACAGAAATAAGCACAGAATACACTCTTCCACCGTaGCGCCACATAGCTATCTTC | + |
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Preference number: 2 (lower is better) Translates to: CSNMKIVLMRRETEISTEYTLPP*RHIAIF Trigger: GAAGATAGCTATGTGGCGTCACGGTGGAAGAGTGTA...TTCTGTGCTTATTTCTGTTTCTCTTCTCATAAGGACGATCTTCATATTAGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATAGGACTTGGTGGTAAGGCCTTTATTATTAAACAAGGCAAACAGAGGACCGAGATAATGAAGAGGTaGCTCTGGGCTGATACAATA | + |
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Preference number: 2 (lower is better) Translates to: QIGLGGKAFIIKQGKQRTEIMKR*LWADTI Trigger: TATTGTATCAGCCCAGAGTCACCTCTTCATTATCTC...GGTCCTCTGTTTGCCTTGTTTAATAATAAAGGCCTTACCACCAAGTCCTATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR CAA 90 bp | AAGCATTCTCTGTTCTTAAAAGAACTGAGAGTCAGCATGTCACTATaGCTTCTTGACGTAGAGACACTGTCTGCTTTCTTCCTCCTTATT | + |
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Preference number: 2 (lower is better) Translates to: KHSLFLKELRVSMSL*LLDVETLSAFFLLI Trigger: AATAAGGAGGAAGAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAGTTCTTTTAAGAACAGAGAATGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR TCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCAGGTTGTCATGTCAGTaGATTGCATTTAATAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: NRHFSGIKKNHTLFHRDARLSCQ*IAFNRP Trigger: AGGCCTATTAAATGCAATTCACTGACATGACAACCT...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATAGGACTTGGTGGTAAGGCCTTTATTATTAAACAAGGCAAACAGAGGACCAAACCGATATTTATTTaGTGTTGGAATTTGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: QIGLGGKAFIIKQGKQRTKPIFI*CWNLSP Trigger: GGGGCTCAAATTCCAACATCAAATAAATATCGGTTT...GGTCCTCTGTTTGCCTTGTTTAATAATAAAGGCCTTACCACCAAGTCCTATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTGAGGATATTTGTAGATaGGATAATGAAGAGGTGACT | + |
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Preference number: 2 (lower is better) Translates to: GGMVQNTQIIFSTSINTAEDICR*DNEEVT Trigger: AGTCACCTCTTCATTATCTCATCTACAAATATCCTC...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTTGCTTAATGCTTGAATaGAGGTCAACACCTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: GGMVQNTQIIFSTSINTACLMLE*RSTPVL Trigger: TAAAACAGGTGTTGACCTTCATTCAAGCATTAAGCA...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAATTTAGTAATGTCTCATTTATCCCAGTTTCTGAAAGGATTGGAAAAGCCTAGGTTGTCATGTCAGTaGATTGCATTTAATAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: WNLVMSHLSQFLKGLEKPRLSCQ*IAFNRP Trigger: AGGCCTATTAAATGCAATTCACTGACATGACAACCT...AGGCTTTTCCAATCCTTTCAGAAACTGGGATAAATGAGACATTACTAAATTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTAATATGAAGATCGTCCTTATGAGAAGAGAAACAGAAATAAGCACAGAAATCTTCATAGTCATGTaGTTTAAAATCATCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: CSNMKIVLMRRETEISTEIFIVM*FKIISL Trigger: GAGGCTGATGATTTTAAACCACATGACTATGAAGAT...TTCTGTGCTTATTTCTGTTTCTCTTCTCATAAGGACGATCTTCATATTAGAGCA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR TCA 72 bp | ACACTGTCTGCTTTCTTCCTCCTTATTTTCGACTCCTaGCAAGCCACCACAGCGGAGTGTTATGAACACCAC | + |
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Preference number: 3 (lower is better) Translates to: TLSAFFLLIFDS*QATTAECYEHH Trigger: GTGGTGTTCATAACACTCCGCTGTGGTGGCTTGTCAGGAGTCGAAAATAAGGAGGAAGAAAGCAGACAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR TCA 72 bp | CCACATAGCTATCTTCATTCTAGGTTGTCATGTCAGTaGATTGCATTTAATAGGCCTGAGCTCGTCTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: PHSYLHSRLSCQ*IAFNRPELVSV Trigger: CACTGAGACGAGCTCAGGCCTATTAAATGCAATTCACTGACATGACAACCTAGAATGAAGATAGCTATGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR TCA 72 bp | AAAAGAACTGAGAGTCAGCATGTCACTATTGCTTCTTaGCGTAGAGACACTGTCTGCTTTCTTCCTCCTTAT | + |
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Preference number: 3 (lower is better) Translates to: KRTESQHVTIAS*RRDTVCFLPPY Trigger: ATAAGGAGGAAGAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAGTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTTGTCATGTCAGTGAATaGCATTTAATAGGCCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: GGMVQNTQIIFSTSINTACHVSE*HLIGLS Trigger: GCTCAGGCCTATTAAATGCAATTCACTGACATGACA...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTAAGGTATTACAGGCATaGAAATACTGGGCTAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GGMVQNTQIIFSTSINTAKVLQA*KYWAKS Trigger: GGACTTAGCCCAGTATTTCAATGCCTGTAATACCTT...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR CAA 90 bp | CAAATAGGACTTGGTGGTAAGGCCTTTATTATTAAACAAGGCAAACAGAGGACCGAAGTCCCTGACTTATaGTTCAGTAGTATAGAACAA | + |
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Preference number: 3 (lower is better) Translates to: QIGLGGKAFIIKQGKQRTEVPDL*FSSIEQ Trigger: TTGTTCTATACTACTGAACAATAAGTCAGGGACTTC...GGTCCTCTGTTTGCCTTGTTTAATAATAAAGGCCTTACCACCAAGTCCTATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR CAA 90 bp | TGGAATTTAGTAATGTCTCATTTATCCCAGTTTCTGAAAGGATTGGAAAAGCCTTGTCATGTCAGTGAATaGCATTTAATAGGCCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: WNLVMSHLSQFLKGLEKPCHVSE*HLIGLS Trigger: GCTCAGGCCTATTAAATGCAATTCACTGACATGACA...AGGCTTTTCCAATCCTTTCAGAAACTGGGATAAATGAGACATTACTAAATTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTCAAACCGATATTTATTaGATGTTGGAATTTGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: GGMVQNTQIIFSTSINTAQTDIY*MLEFEP Trigger: GGGCTCAAATTCCAACATCAAATAAATATCGGTTTG...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR TCA 72 bp | TATACCAGCATAGAATTAAACAAACCGATATTTATTTaGTGTTGGAATTTGAGCCCCGAGGCCTCTCTTTAT | + |
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Preference number: 3 (lower is better) Translates to: YTSIELNKPIFI*CWNLSPEASLY Trigger: ATAAAGAGAGGCCTCGGGGCTCAAATTCCAACATCAAATAAATATCGGTTTGTTTAATTCTATGCTGGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| 3UTR TCA 72 bp | ATCTCTAGGTTATCATGGCTTCTGCTAGCAACTTCATaGGAAGGTTATTTTATTTCTTGTCAAGATACAAAG | + |
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Preference number: 3 (lower is better) Translates to: ISRLSWLLLATS*EGYFISCQDTK Trigger: CTTTGTATCTTGACAAGAAATAAAATAACCTTCTCATGAAGTTGCTAGCAGAAGCCATGATAACCTAGAGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR CCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCCGTTGCAAGACAGGATaGTCCCATCTGAGTCACACC | + |
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Preference number: 4 (lower is better) Translates to: LRVSMSLLLLDVETLSAFRCKTG*SHLSHT Trigger: GGTGTGACTCAGATGGGACCATCCTGTCTTGCAACG...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR TCA 90 bp | CAAATAGGACTTGGTGGTAAGGCCTTTATTATTAAACAAGGCAAACAGAGGACCTTGCTGCCCAGCAGGTaGGAGATCTCGGTCTACAGC | + |
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Preference number: 4 (lower is better) Translates to: QIGLGGKAFIIKQGKQRTLLPSR*EISVYS Trigger: GCTGTAGACCGAGATCTCTCACCTGCTGGGCAGCAA...GGTCCTCTGTTTGCCTTGTTTAATAATAAAGGCCTTACCACCAAGTCCTATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR CCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCTGGTTTGCTGAACACTaGTGGCTCATCCACATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LRVSMSLLLLDVETLSAFWFAEH*WLIHIQ Trigger: CTGGATGTGGATGAGCCACCAGTGTTCAGCAAACCA...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR TCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCAAGCGGTGGTCAAGGTaGAGGTTGGAGGCCTCTACT | + |
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Preference number: 4 (lower is better) Translates to: NRHFSGIKKNHTLFHRDAKRWSR*RLEAST Trigger: AGTAGAGGCCTCCAACCTTCACCTTGACCACCGCTT...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR TCA 90 bp | TTAAAATCATCAGCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTTTGCTGCCCAGCAGGTaGGAGATCTCGGTCTACAGC | + |
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Preference number: 4 (lower is better) Translates to: LKSSASQISRLSWLLLATLLPSR*EISVYS Trigger: GCTGTAGACCGAGATCTCTCACCTGCTGGGCAGCAA...AGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGCTGATGATTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR GCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCTCTGTGGCCTTCACCTaGAGCACATACGCACCCACA | + |
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Preference number: 4 (lower is better) Translates to: NRHFSGIKKNHTLFHRDASVAFT*STYAPT Trigger: TGTGGGTGCGTATGTGCTGCAGGTGAAGGCCACAGA...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR GCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCATGAGGACCTGGTACTaGTCTTTGACTTCTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LRVSMSLLLLDVETLSAFMRTWY*SLTSLS Trigger: GGACAGAGAAGTCAAAGAGCAGTACCAGGTCCTCAT...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR GCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCCCTCTGCCTCCTCAGTaGTACATACAGCACAACAAT | + |
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Preference number: 4 (lower is better) Translates to: LRVSMSLLLLDVETLSAFPLPPQ*YIQHNN Trigger: ATTGTTGTGCTGTATGTAGCACTGAGGAGGCAGAGG...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR GCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCTTCTCCAAACATGTCTaGCAAGACCTTAAAGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LRVSMSLLLLDVETLSAFFSKHV*QDLKAG Trigger: CCCCGCTTTAAGGTCTTGGCAGACATGTTTGGAGAA...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR CCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCAGCAGTATCCTTAAATaGCCCAGCAGAGTGAAAGCG | + |
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Preference number: 4 (lower is better) Translates to: LRVSMSLLLLDVETLSAFSSILK*PSRVKA Trigger: CGCTTTCACTCTGCTGGGCCATTTAAGGATACTGCT...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR TCA 90 bp | GAGTTTGGGAAGCATTCTCTGTTCTTAAAAGAACTGAGAGTCAGCATGTCACTAGAGAGTCTATGGAGCTaGGTGATTCTGCCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: EFGKHSLFLKELRVSMSLESLWS*VILPLS Trigger: GCTCAGTGGCAGAATCACTCAGCTCCATAGACTCTC...TAGTGACATGCTGACTCTCAGTTCTTTTAAGAACAGAGAATGCTTCCCAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR GCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCCTTTCAGATGGAAGATaGTTTTTGGGAAGCGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LRVSMSLLLLDVETLSAFLSDGR*FLGSEV Trigger: CACCTCGCTTCCCAAAAAGCATCTTCCATCTGAAAG...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR CCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCTTATCTGTCCTGGCTTaGCATTCTCACATACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LRVSMSLLLLDVETLSAFLSVLA*HSHIQL Trigger: CAGCTGTATGTGAGAATGCCAAGCCAGGACAGATAA...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR TCA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAAAAGCGGTGGTCAAGGTaGAGGTTGGAGGCCTCTACT | + |
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Preference number: 4 (lower is better) Translates to: ELHLIGLSSSQCVSEITKKRWSR*RLEAST Trigger: AGTAGAGGCCTCCAACCTTCACCTTGACCACCGCTT...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR TCA 90 bp | TTAAAATCATCAGCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTGAGAGTCTATGGAGCTaGGTGATTCTGCCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LKSSASQISRLSWLLLATESLWS*VILPLS Trigger: GCTCAGTGGCAGAATCACTCAGCTCCATAGACTCTC...AGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGCTGATGATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR CCA 90 bp | GAGTTTGGGAAGCATTCTCTGTTCTTAAAAGAACTGAGAGTCAGCATGTCACTACCACGTTTAACTCGTTaGAAATGGGATCGTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: EFGKHSLFLKELRVSMSLPRLTR*KWDRLP Trigger: GGGGAGACGATCCCATTTCCAACGAGTTAAACGTGG...TAGTGACATGCTGACTCTCAGTTCTTTTAAGAACAGAGAATGCTTCCCAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR CCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCTGGTTTGCTGAACACTaGTGGCTCATCCACATCCAG | + |
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Preference number: 4 (lower is better) Translates to: NRHFSGIKKNHTLFHRDAWFAEH*WLIHIQ Trigger: CTGGATGTGGATGAGCCACCAGTGTTCAGCAAACCA...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR CCA 90 bp | CAAATAGGACTTGGTGGTAAGGCCTTTATTATTAAACAAGGCAAACAGAGGACCCTCCATGGTGTACAGTaGTTTGCTGAACACTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QIGLGGKAFIIKQGKQRTLHGVQ*FAEHWW Trigger: CCACCAGTGTTCAGCAAACCACTGTACACCATGGAG...GGTCCTCTGTTTGCCTTGTTTAATAATAAAGGCCTTACCACCAAGTCCTATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR CCA 90 bp | TTAAAATCATCAGCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTCGTTGCAAGACAGGATaGTCCCATCTGAGTCACACC | + |
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Preference number: 4 (lower is better) Translates to: LKSSASQISRLSWLLLATRCKTG*SHLSHT Trigger: GGTGTGACTCAGATGGGACCATCCTGTCTTGCAACG...AGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGCTGATGATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS-3UTR CCA 90 bp | CAAATAGGACTTGGTGGTAAGGCCTTTATTATTAAACAAGGCAAACAGAGGACCTCTCTTCGATCACCTTaGGATTTCTCAGAGCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QIGLGGKAFIIKQGKQRTSLRSP*DFSEPR Trigger: TCGGGGCTCTGAGAAATCCCAAGGTGATCGAAGAGA...GGTCCTCTGTTTGCCTTGTTTAATAATAAAGGCCTTACCACCAAGTCCTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCTGTCTTTCGCTTGAATaGGGACCTGGTACTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NRHFSGIKKNHTLFHRDACLSLE*GPGTAL Trigger: AAGAGCAGTACCAGGTCCTCATTCAAGCGAAAGACA...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTTGGGAAGCATTCTCTGTTCTTAAAAGAACTGAGAGTCAGCATGTCACTATGTCTTTCGCTTGAATaGGGACCTGGTACTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EFGKHSLFLKELRVSMSLCLSLE*GPGTAL Trigger: AAGAGCAGTACCAGGTCCTCATTCAAGCGAAAGACA...TAGTGACATGCTGACTCTCAGTTCTTTTAAGAACAGAGAATGCTTCCCAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | TGGAATTTAGTAATGTCTCATTTATCCCAGTTTCTGAAAGGATTGGAAAAGCCTTCTGTGGCCTTCACCTaGAGCACATACGCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: WNLVMSHLSQFLKGLEKPSVAFT*STYAPT Trigger: TGTGGGTGCGTATGTGCTGCAGGTGAAGGCCACAGA...AGGCTTTTCCAATCCTTTCAGAAACTGGGATAAATGAGACATTACTAAATTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAATCATCAGCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTATAGGTAGGATCGTCTaGATCTGTGGCCTTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKSSASQISRLSWLLLATIGRIV*ICGLHL Trigger: CAGGTGAAGGCCACAGATGCAGACGATCCTACCTAT...AGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGCTGATGATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | CAAATAGGACTTGGTGGTAAGGCCTTTATTATTAAACAAGGCAAACAGAGGACCTTCTCCAAACATGTCTaGCAAGACCTTAAAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QIGLGGKAFIIKQGKQRTFSKHV*QDLKAG Trigger: CCCCGCTTTAAGGTCTTGGCAGACATGTTTGGAGAA...GGTCCTCTGTTTGCCTTGTTTAATAATAAAGGCCTTACCACCAAGTCCTATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCATGGACTGTAAAATTTaGTTTGATGACAGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVSMSLLLLDVETLSAFMDCKI*FDDSLW Trigger: CCAGAGGCTGTCATCAAACCAAATTTTACAGTCCAT...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAATCATCAGCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTTATTCTTCCAATAGCTaGGCCAACAGGGGAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LKSSASQISRLSWLLLATYSSNS*ANRGRL Trigger: GAGTCTTCCCCTGTTGGCTCAGCTATTGGAAGAATA...AGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGCTGATGATTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCGTGTATCCTCATCTGTaGCAATGTCAAACAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRVSMSLLLLDVETLSAFVYPHL*QCQTNF Trigger: GAAATTTGTTTGACATTGTCACAGATGAGGATACAC...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCTCAAAGCTCCAGTGCTaGGTCCTACAGGTAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NRHFSGIKKNHTLFHRDASKLQC*VLQVEK Trigger: TTTTTCTACCTGTAGGACTCAGCACTGGAGCTTTGA...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTTGGGAAGCATTCTCTGTTCTTAAAAGAACTGAGAGTCAGCATGTCACTAAAATTGCTTCCACGTTaGAAGACAGGATGGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EFGKHSLFLKELRVSMSLKLLPR*KTGWSH Trigger: ATGGGACCATCCTGTCTTGCAACGTGGAAGCAATTT...TAGTGACATGCTGACTCTCAGTTCTTTTAAGAACAGAGAATGCTTCCCAAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTGTGTCTTTCTTCCTCTaGCTCCTCAGTGCTACATAC | + |
|
Preference number: 4 (lower is better) Translates to: GGMVQNTQIIFSTSINTAVSFFL*LLSATY Trigger: GTATGTAGCACTGAGGAGGCAGAGGAAGAAAGACAC...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAACCACGTTTAACTCGTTaGAAATGGGATCGTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELHLIGLSSSQCVSEITKPRLTR*KWDRLP Trigger: GGGGAGACGATCCCATTTCCAACGAGTTAAACGTGG...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCTTATCTGTCCTGGCTTaGCATTCTCACATACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRHFSGIKKNHTLFHRDALSVLA*HSHIQL Trigger: CAGCTGTATGTGAGAATGCCAAGCCAGGACAGATAA...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAATCATCAGCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTCCTCATACGCATAAGTaGCCAAGGAATCGTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKSSASQISRLSWLLLATPHTHK*PRNRMV Trigger: CACCATACGATTCCTTGGCCACTTATGCGTATGAGG...AGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGCTGATGATTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTTCAAAGCTCCAGTGCTaGGTCCTACAGGTAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GGMVQNTQIIFSTSINTASKLQC*VLQVEK Trigger: TTTTTCTACCTGTAGGACTCAGCACTGGAGCTTTGA...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCTCCTGTAGCCTTCGGTaGATAAAATCCCTTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRHFSGIKKNHTLFHRDASCSLR*IKSLMS Trigger: AGACATAAGGGATTTTATTCACCGAAGGCTACAGGA...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAAGTGTCTTTCTTCCTCTaGCTCCTCAGTGCTACATAC | + |
|
Preference number: 4 (lower is better) Translates to: ELHLIGLSSSQCVSEITKVSFFL*LLSATY Trigger: GTATGTAGCACTGAGGAGGCAGAGGAAGAAAGACAC...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAAAGCAGTATCCTTAAATaGCCCAGCAGAGTGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ELHLIGLSSSQCVSEITKSSILK*PSRVKA Trigger: CGCTTTCACTCTGCTGGGCCATTTAAGGATACTGCT...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCTAATATGAAGATCGTCCTTATGAGAAGAGAAACAGAAATAAGCACAGAACTCCATGGTGTACAGTaGTTTGCTGAACACTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSNMKIVLMRRETEISTELHGVQ*FAEHWW Trigger: CCACCAGTGTTCAGCAAACCACTGTACACCATGGAG...TTCTGTGCTTATTTCTGTTTCTCTTCTCATAAGGACGATCTTCATATTAGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | CAAATAGGACTTGGTGGTAAGGCCTTTATTATTAAACAAGGCAAACAGAGGACCTACAGCTGTCTCATATaGCACAGATATTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QIGLGGKAFIIKQGKQRTYSCLI*HRYFWR Trigger: CCTCCAGAAATATCTGTGCCATATGAGACAGCTGTA...GGTCCTCTGTTTGCCTTGTTTAATAATAAAGGCCTTACCACCAAGTCCTATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCTACAGCTGTCTCATATaGCACAGATATTTCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRHFSGIKKNHTLFHRDAYSCLI*HRYFWR Trigger: CCTCCAGAAATATCTGTGCCATATGAGACAGCTGTA...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | CAAATAGGACTTGGTGGTAAGGCCTTTATTATTAAACAAGGCAAACAGAGGACCAGGCTTCTTATTGCATaGATGTCTCCTGTAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QIGLGGKAFIIKQGKQRTRLLIA*MSPVVS Trigger: TGAAACTACAGGAGACATTCATGCAATAAGAAGCCT...GGTCCTCTGTTTGCCTTGTTTAATAATAAAGGCCTTACCACCAAGTCCTATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTTGGGAAGCATTCTCTGTTCTTAAAAGAACTGAGAGTCAGCATGTCACTAAGGCTTCTTATTGCATaGATGTCTCCTGTAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EFGKHSLFLKELRVSMSLRLLIA*MSPVVS Trigger: TGAAACTACAGGAGACATTCATGCAATAAGAAGCCT...TAGTGACATGCTGACTCTCAGTTCTTTTAAGAACAGAGAATGCTTCCCAAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCATCCAGGCTTCTTATTaGATGAATGTCTCCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NRHFSGIKKNHTLFHRDAIQASY*MNVSCS Trigger: ACTACAGGAGACATTCATGCAATAAGAAGCCTGGAT...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | TGGAATTTAGTAATGTCTCATTTATCCCAGTTTCTGAAAGGATTGGAAAAGCCTCCTCTGCCTCCTCAGTaGTACATACAGCACAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: WNLVMSHLSQFLKGLEKPPLPPQ*YIQHNN Trigger: ATTGTTGTGCTGTATGTAGCACTGAGGAGGCAGAGG...AGGCTTTTCCAATCCTTTCAGAAACTGGGATAAATGAGACATTACTAAATTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTTTTCTTTTGGTTCTGTaGCTAAAGTCTGTTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGMVQNTQIIFSTSINTAFLLVL*LKSVGA Trigger: AGCCCCAACAGACTTTAGCCACAGAACCAAAAGAAA...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCTAATATGAAGATCGTCCTTATGAGAAGAGAAACAGAAATAAGCACAGAAATGGAAGATGCTTTTTaGGAAGCGAGGTGGGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSNMKIVLMRRETEISTEMEDAF*EARWVV Trigger: GACAACCCACCTCGCTTCCCAAAAAGCATCTTCCAT...TTCTGTGCTTATTTCTGTTTCTCTTCTCATAAGGACGATCTTCATATTAGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCATTTCCCCCATCTCCTaGGACAATGTTGTATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NRHFSGIKKNHTLFHRDAISPIS*DNVVFN Trigger: ATTGAATACAACATTGTCCCAGGAGATGGGGGAAAT...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | TGGAATTTAGTAATGTCTCATTTATCCCAGTTTCTGAAAGGATTGGAAAAGCCTCCTCATACGCATAAGTaGCCAAGGAATCGTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WNLVMSHLSQFLKGLEKPPHTHK*PRNRMV Trigger: CACCATACGATTCCTTGGCCACTTATGCGTATGAGG...AGGCTTTTCCAATCCTTTCAGAAACTGGGATAAATGAGACATTACTAAATTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| 3UTR CAA 72 bp | ATAGCTATCTTCATTCTAGGTTGTCATGTCAGTGAATaGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IAIFILGCHVSE*HLIGLSSSQCV Trigger: AACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTCACTGACATGACAACCTAGAATGAAGATAGCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTATCCAGGCTTCTTATTaGATGAATGTCTCCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGMVQNTQIIFSTSINTAIQASY*MNVSCS Trigger: ACTACAGGAGACATTCATGCAATAAGAAGCCTGGAT...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | TGGAATTTAGTAATGTCTCATTTATCCCAGTTTCTGAAAGGATTGGAAAAGCCTCTTTCAGATGGAAGATaGTTTTTGGGAAGCGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WNLVMSHLSQFLKGLEKPLSDGR*FLGSEV Trigger: CACCTCGCTTCCCAAAAAGCATCTTCCATCTGAAAG...AGGCTTTTCCAATCCTTTCAGAAACTGGGATAAATGAGACATTACTAAATTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | TGCTCTAATATGAAGATCGTCCTTATGAGAAGAGAAACAGAAATAAGCACAGAAAAATTGCTTCCACGTTaGAAGACAGGATGGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSNMKIVLMRRETEISTEKLLPR*KTGWSH Trigger: ATGGGACCATCCTGTCTTGCAACGTGGAAGCAATTT...TTCTGTGCTTATTTCTGTTTCTCTTCTCATAAGGACGATCTTCATATTAGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAATTTCTTTTGGTTCTGTaGCTAAAGTCTGTTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELHLIGLSSSQCVSEITKFLLVL*LKSVGA Trigger: AGCCCCAACAGACTTTAGCCACAGAACCAAAAGAAA...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAATCGGGAACTTTCAGATaGAAGATGCTTTTTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELHLIGLSSSQCVSEITKSGTFR*KMLFGK Trigger: CTTCCCAAAAAGCATCTTCCATCTGAAAGTTCCCGA...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTATGGACTGTAAAATTTaGTTTGATGACAGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGMVQNTQIIFSTSINTAMDCKI*FDDSLW Trigger: CCAGAGGCTGTCATCAAACCAAATTTTACAGTCCAT...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | TGGAATTTAGTAATGTCTCATTTATCCCAGTTTCTGAAAGGATTGGAAAAGCCTTCCTGTAGCCTTCGGTaGATAAAATCCCTTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WNLVMSHLSQFLKGLEKPSCSLR*IKSLMS Trigger: AGACATAAGGGATTTTATTCACCGAAGGCTACAGGA...AGGCTTTTCCAATCCTTTCAGAAACTGGGATAAATGAGACATTACTAAATTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCTAATATGAAGATCGTCCTTATGAGAAGAGAAACAGAAATAAGCACAGAATCGGGAACTTTCAGATaGAAGATGCTTTTTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSNMKIVLMRRETEISTESGTFR*KMLFGK Trigger: CTTCCCAAAAAGCATCTTCCATCTGAAAGTTCCCGA...TTCTGTGCTTATTTCTGTTTCTCTTCTCATAAGGACGATCTTCATATTAGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGGGAAGCATTCTCTGTTCTTAAAAGAACTGAGAGTCAGCATGTCACTACTTTACTTGCAATTATaGAGAAATTATACTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EFGKHSLFLKELRVSMSLLYLQL*RNYTAP Trigger: TGGCGCAGTATAATTTCTCCATAATTGCAAGTAAAG...TAGTGACATGCTGACTCTCAGTTCTTTTAAGAACAGAGAATGCTTCCCAAACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR TCA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAAGTGTATCCTCATCTGTaGCAATGTCAAACAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELHLIGLSSSQCVSEITKVYPHL*QCQTNF Trigger: GAAATTTGTTTGACATTGTCACAGATGAGGATACAC...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTAAAATCAGGATCTACTaGTCTTATTCTTCCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGMVQNTQIIFSTSINTAKIRIY*SYSSNS Trigger: GCTATTGGAAGAATAAGAGCAGTAGATCCTGATTTT...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTCTTTACTTGCAATTATaGAGAAATTATACTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGMVQNTQIIFSTSINTALYLQL*RNYTAP Trigger: TGGCGCAGTATAATTTCTCCATAATTGCAAGTAAAG...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| 3UTR CAA 72 bp | ATATACCAGCATAGAATTAAACAAACCGATATTTATTaGATGTTGGAATTTGAGCCCCGAGGCCTCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: IYQHRIKQTDIY*MLEFEPRGLSL Trigger: TAAAGAGAGGCCTCGGGGCTCAAATTCCAACATCAAATAAATATCGGTTTGTTTAATTCTATGCTGGTATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS CCA 90 bp | ATCCACATCCAGCACGCTGATTTTTACTGTAGCAGTATCCTTAAATaGCCCAGCAGAGTGAAAGCGGTGGTCAAGGTGAAGGTTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IHIQHADFYCSSILK*PSRVKAVVKVKVGG Trigger: GCCTCCAACCTTCACCTTGACCACCGCTTTCACTCTGCTGGGCCATTTAAGGATACTGCTACAGTAAAAATCAGCGTGCTGGATGTGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS GCA 90 bp | ATCTATGAAGTACCTAACAGCACTACTGCCCACATCAAGGTCTTGTaGTGTGACAGCTCCGATGATGGTCCCCACAGGAGTGTCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: IYEVPNSTTAHIKVL*CDSSDDGPHRSVFI Trigger: TATGAAGACACTCCTGTGGGGACCATCATCGGAGCTGTCACAGCACAAGACCTTGATGTGGGCAGTAGTGCTGTTAGGTACTTCATAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCTTCTCTTCGATCACCTaGGGATTTCTCAGAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LRVSMSLLLLDVETLSAFFSSIT*GFLRAP Trigger: CGGGGCTCTGAGAAATCCCAAGGTGATCGAAGAGAA...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCTCCCATGTCTTTCGCTaGAATGAGGACCTGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LRVSMSLLLLDVETLSAFSHVFR*NEDLVL Trigger: CAGTACCAGGTCCTCATTCAAGCGAAAGACATGGGA...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCGATGGAAGATGCTTTTaGGGAAGCGAGGTGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRVSMSLLLLDVETLSAFDGRCF*GSEVGC Trigger: ACAACCCACCTCGCTTCCCAAAAAGCATCTTCCATC...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS GCA 90 bp | AAATTTGGTTTGATGACAGCCTCTGGTGCTAATCTAAAGGAGAATTaGTGCCCAGCAGGTGAGAGATCTCGGTCTACAGCACCAACTATC | + |
|
Preference number: 5 (lower is better) Translates to: KFGLMTASGANLKEN*CPAGERSRSTAPTI Trigger: GATAGTTGGTGCTGTAGACCGAGATCTCTCACCTGCTGGGCAGCAATTCTCCTTTAGATTAGCACCAGAGGCTGTCATCAAACCAAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS CCA 90 bp | GTCTTCATAAACCTCCATGGTGTACAGTGGTTTGCTGAACACTGGTaGCTCATCCACATCCAGCACGCTGATTTTTACTGTAGCAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: VFINLHGVQWFAEHW*LIHIQHADFYCSSI Trigger: GATACTGCTACAGTAAAAATCAGCGTGCTGGATGTGGATGAGCCACCAGTGTTCAGCAAACCACTGTACACCATGGAGGTTTATGAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS CCA 90 bp | AGTGTCTTCATAAACCTCCATGGTGTACAGTGGTTTGCTGAACACTaGTGGCTCATCCACATCCAGCACGCTGATTTTTACTGTAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVFINLHGVQWFAEH*WLIHIQHADFYCSS Trigger: ACTGCTACAGTAAAAATCAGCGTGCTGGATGTGGATGAGCCACCAGTGTTCAGCAAACCACTGTACACCATGGAGGTTTATGAAGACACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS CCA 90 bp | TATTCGTGCTGCTCTGGACAGGATAACTGCTGTCTTCTATTACAATaGGAAGGAAATACAACTCCTGCTGCCTGCGGCTATAGCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: YSCCSGQDNCCLLLQ*EGNTTPAACGYSHF Trigger: GAAATGGCTATAGCCGCAGGCAGCAGGAGTTGTATTTCCTTCCCATTGTAATAGAAGACAGCAGTTATCCTGTCCAGAGCAGCACGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCGCCACGTTTAACTCGTaGGAAATGGGATCGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NRHFSGIKKNHTLFHRDAATFNS*EMGSSP Trigger: GGGAGACGATCCCATTTCCAACGAGTTAAACGTGGC...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTTGGGAAGCATTCTCTGTTCTTAAAAGAACTGAGAGTCAGCATGTCACTAGCCACGTTTAACTCGTaGGAAATGGGATCGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EFGKHSLFLKELRVSMSLATFNS*EMGSSP Trigger: GGGAGACGATCCCATTTCCAACGAGTTAAACGTGGC...TAGTGACATGCTGACTCTCAGTTCTTTTAAGAACAGAGAATGCTTCCCAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAATCATCAGCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTGCCCACATCAAGGTCTaGTGCTGTGACAGCTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LKSSASQISRLSWLLLATAHIKV*CCDSSD Trigger: ATCGGAGCTGTCACAGCACAAGACCTTGATGTGGGC...AGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGCTGATGATTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCTCGATTCCAGCTGTGTaGTTTCTGAAGTCATGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LRVSMSLLLLDVETLSAFSIPAV*FLKSWT Trigger: AGTCCATGACTTCAGAAACAACACAGCTGGAATCGA...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCTCCCTTATGTCTGTGTaGTCTTCCACTTGTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRVSMSLLLLDVETLSAFSLMSV*SSTCGL Trigger: AAGACCACAAGTGGAAGACAACACAGACATAAGGGA...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCACTGTAAAATTTGGTTaGATGACAGCCTCTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRVSMSLLLLDVETLSAFTVKFG*MTASGA Trigger: AGCACCAGAGGCTGTCATCAAACCAAATTTTACAGT...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCATATCCCTGCGAATTTaGTTCTCTTCGATCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRVSMSLLLLDVETLSAFISLRI*FSSITL Trigger: CAAGGTGATCGAAGAGAACAAAATTCGCAGGGATAT...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTGATGGAAGATGCTTTTaGGGAAGCGAGGTGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGMVQNTQIIFSTSINTADGRCF*GSEVGC Trigger: ACAACCCACCTCGCTTCCCAAAAAGCATCTTCCATC...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGTCAGCATGTCACTATTGCTTCTTGACGTAGAGACACTGTCTGCTTTCTTTGATGATTCCTTCTaGTGTATCCTCATCTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRVSMSLLLLDVETLSAFFDDSF*CILICD Trigger: GTCACAGATGAGGATACACAAGAAGGAATCATCAAA...GAAAGCAGACAGTGTCTCTACGTCAAGAAGCAATAGTGACATGCTGACTCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCTAATATGAAGATCGTCCTTATGAGAAGAGAAACAGAAATAAGCACAGAAGCCCACATCAAGGTCTaGTGCTGTGACAGCTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: CSNMKIVLMRRETEISTEAHIKV*CCDSSD Trigger: ATCGGAGCTGTCACAGCACAAGACCTTGATGTGGGC...TTCTGTGCTTATTTCTGTTTCTCTTCTCATAAGGACGATCTTCATATTAGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAATTCTCTTCGATCACCTaGGGATTTCTCAGAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ELHLIGLSSSQCVSEITKFSSIT*GFLRAP Trigger: CGGGGCTCTGAGAAATCCCAAGGTGATCGAAGAGAA...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAAATGGTGTACAGTGGTTaGCTGAACACTGGTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ELHLIGLSSSQCVSEITKMVYSG*LNTGGS Trigger: TGAGCCACCAGTGTTCAGCAAACCACTGTACACCAT...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | CAAATAGGACTTGGTGGTAAGGCCTTTATTATTAAACAAGGCAAACAGAGGACCATTATCTGTCCTGGCTaGGCATTCTCACATACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QIGLGGKAFIIKQGKQRTIICPG*AFSHTA Trigger: AGCTGTATGTGAGAATGCCAAGCCAGGACAGATAAT...GGTCCTCTGTTTGCCTTGTTTAATAATAAAGGCCTTACCACCAAGTCCTATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTTGGGAAGCATTCTCTGTTCTTAAAAGAACTGAGAGTCAGCATGTCACTATCGATTCCAGCTGTGTaGTTTCTGAAGTCATGGACT | + |
|
Preference number: 5 (lower is better) Translates to: EFGKHSLFLKELRVSMSLSIPAV*FLKSWT Trigger: AGTCCATGACTTCAGAAACAACACAGCTGGAATCGA...TAGTGACATGCTGACTCTCAGTTCTTTTAAGAACAGAGAATGCTTCCCAAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTAAAATTGCTTCCACGTaGCAAGACAGGATGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGMVQNTQIIFSTSINTAKIAST*QDRMVP Trigger: TGGGACCATCCTGTCTTGCAACGTGGAAGCAATTTT...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGAATGGTTCAAAACACACAGATTATCTTTAGTACATCAATCAACACTGCTCCATGCATAGTAGGATaGCAATCAAAGCTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGMVQNTQIIFSTSINTAPCIVG*QSKLQC Trigger: GCACTGGAGCTTTGATTGCAATCCTACTATGCATGG...AGCAGTGTTGATTGATGTACTAAAGATAATCTGTGTGTTTTGAACCATTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAATCATCAGCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTCCATGCATAGTAGGATaGCAATCAAAGCTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKSSASQISRLSWLLLATPCIVG*QSKLQC Trigger: GCACTGGAGCTTTGATTGCAATCCTACTATGCATGG...AGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGCTGATGATTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | AATAGGCACTTTAGTGGAATTAAGAAAAATCATACACTCTTCCACCGTGACGCCAATAGAGAAATAAGGTaGCCCCTGAAGGATGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: NRHFSGIKKNHTLFHRDANREIR*PLKDAV Trigger: TACAGCATCCTTCAGGGGCAACCTTATTTCTCTATT...GGCGTCACGGTGGAAGAGTGTATGATTTTTCTTAATTCCACTAAAGTGCCTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCTAATATGAAGATCGTCCTTATGAGAAGAGAAACAGAAATAAGCACAGAAATGGTGTACAGTGGTTaGCTGAACACTGGTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSNMKIVLMRRETEISTEMVYSG*LNTGGS Trigger: TGAGCCACCAGTGTTCAGCAAACCACTGTACACCAT...TTCTGTGCTTATTTCTGTTTCTCTTCTCATAAGGACGATCTTCATATTAGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAATCATCAGCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTATTATCTGTCCTGGCTaGGCATTCTCACATACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LKSSASQISRLSWLLLATIICPG*AFSHTA Trigger: AGCTGTATGTGAGAATGCCAAGCCAGGACAGATAAT...AGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGCTGATGATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAAAAAATTGCTTCCACGTaGCAAGACAGGATGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ELHLIGLSSSQCVSEITKKIAST*QDRMVP Trigger: TGGGACCATCCTGTCTTGCAACGTGGAAGCAATTTT...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAATCATCAGCCTCTCAAATCTCTAGGTTATCATGGCTTCTGCTAGCAACTAATAGAGAAATAAGGTaGCCCCTGAAGGATGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LKSSASQISRLSWLLLATNREIR*PLKDAV Trigger: TACAGCATCCTTCAGGGGCAACCTTATTTCTCTATT...AGTTGCTAGCAGAAGCCATGATAACCTAGAGATTTGAGAGGCTGATGATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAAACTGTAAAATTTGGTTaGATGACAGCCTCTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ELHLIGLSSSQCVSEITKTVKFG*MTASGA Trigger: AGCACCAGAGGCTGTCATCAAACCAAATTTTACAGT...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCTAATATGAAGATCGTCCTTATGAGAAGAGAAACAGAAATAAGCACAGAATCCCTTATGTCTGTGTaGTCTTCCACTTGTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CSNMKIVLMRRETEISTESLMSV*SSTCGL Trigger: AAGACCACAAGTGGAAGACAACACAGACATAAGGGA...TTCTGTGCTTATTTCTGTTTCTCTTCTCATAAGGACGATCTTCATATTAGAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCTAATATGAAGATCGTCCTTATGAGAAGAGAAACAGAAATAAGCACAGAAATATCCCTGCGAATTTaGTTCTCTTCGATCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSNMKIVLMRRETEISTEISLRI*FSSITL Trigger: CAAGGTGATCGAAGAGAACAAAATTCGCAGGGATAT...TTCTGTGCTTATTTCTGTTTCTCTTCTCATAAGGACGATCTTCATATTAGAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS-3UTR CAA 90 bp | GAATTGCATTTAATAGGCCTGAGCTCGTCTCAGTGTGTTTCTGAAATAACAAAATCTCCTGGGACAATGTaGTATTCAATTTCTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: ELHLIGLSSSQCVSEITKSPGTM*YSISAF Trigger: AAATGCAGAAATTGAATACAACATTGTCCCAGGAGA...TTTTGTTATTTCAGAAACACACTGAGACGAGCTCAGGCCTATTAAATGCAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS GCA 90 bp | AATAATGGGTTACTAACTTTACTTGCAATTATGGAGAAATTATACTaGGCCATGTTCTCTCTGTCTAGTAATTCATTAGTGGCGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NNGLLTLLAIMEKLY*AMFSLSSNSLVAMV Trigger: AACCATCGCCACTAATGAATTACTAGACAGAGAGAACATGGCGCAGTATAATTTCTCCATAATTGCAAGTAAAGTTAGTAACCCATTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS GCA 72 bp | GTACCTAACAGCACTACTGCCCACATCAAGGTCTTGTaGTGTGACAGCTCCGATGATGGTCCCCACAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VPNSTTAHIKVL*CDSSDDGPHRS Trigger: ACTCCTGTGGGGACCATCATCGGAGCTGTCACAGCACAAGACCTTGATGTGGGCAGTAGTGCTGTTAGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS CAA 72 bp | GAAGTACCTAACAGCACTACTGCCCACATCAAGGTCTaGTGCTGTGACAGCTCCGATGATGGTCCCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: EVPNSTTAHIKV*CCDSSDDGPHR Trigger: CCTGTGGGGACCATCATCGGAGCTGTCACAGCACAAGACCTTGATGTGGGCAGTAGTGCTGTTAGGTACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS CAA 90 bp | CCAATCTATGAAGTACCTAACAGCACTACTGCCCACATCAAGGTCTaGTGCTGTGACAGCTCCGATGATGGTCCCCACAGGAGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PIYEVPNSTTAHIKV*CCDSSDDGPHRSVF Trigger: GAAGACACTCCTGTGGGGACCATCATCGGAGCTGTCACAGCACAAGACCTTGATGTGGGCAGTAGTGCTGTTAGGTACTTCATAGATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS GCA 72 bp | TTGATGACAGCCTCTGGTGCTAATCTAAAGGAGAATTaGTGCCCAGCAGGTGAGAGATCTCGGTCTACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LMTASGANLKEN*CPAGERSRSTA Trigger: TGCTGTAGACCGAGATCTCTCACCTGCTGGGCAGCAATTCTCCTTTAGATTAGCACCAGAGGCTGTCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS CCA 72 bp | CAGCACGCTGATTTTTACTGTAGCAGTATCCTTAAATaGCCCAGCAGAGTGAAAGCGGTGGTCAAGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QHADFYCSSILK*PSRVKAVVKVK Trigger: CTTCACCTTGACCACCGCTTTCACTCTGCTGGGCCATTTAAGGATACTGCTACAGTAAAAATCAGCGTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS CCA 72 bp | AACCTCCATGGTGTACAGTGGTTTGCTGAACACTGGTaGCTCATCCACATCCAGCACGCTGATTTTTACTGT | + |
|
Preference number: 6 (lower is better) Translates to: NLHGVQWFAEHW*LIHIQHADFYC Trigger: ACAGTAAAAATCAGCGTGCTGGATGTGGATGAGCCACCAGTGTTCAGCAAACCACTGTACACCATGGAGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS CAA 72 bp | GTGCTGAGTCCTACAGGTAGAAAAATTGCTTCCACGTaGCAAGACAGGATGGTCCCATCTGAGTCACACCTA | + |
|
Preference number: 6 (lower is better) Translates to: VLSPTGRKIAST*QDRMVPSESHL Trigger: TAGGTGTGACTCAGATGGGACCATCCTGTCTTGCAACGTGGAAGCAATTTTTCTACCTGTAGGACTCAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
||
| CDS CAA 90 bp | AAAGCTCCAGTGCTGAGTCCTACAGGTAGAAAAATTGCTTCCACGTaGCAAGACAGGATGGTCCCATCTGAGTCACACCTACAAACACGA | + |
|
Preference number: 6 (lower is better) Translates to: KAPVLSPTGRKIAST*QDRMVPSESHLQTR Trigger: TCGTGTTTGTAGGTGTGACTCAGATGGGACCATCCTGTCTTGCAACGTGGAAGCAATTTTTCTACCTGTAGGACTCAGCACTGGAGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS CCA 72 bp | ATAAACCTCCATGGTGTACAGTGGTTTGCTGAACACTaGTGGCTCATCCACATCCAGCACGCTGATTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: INLHGVQWFAEH*WLIHIQHADFY Trigger: GTAAAAATCAGCGTGCTGGATGTGGATGAGCCACCAGTGTTCAGCAAACCACTGTACACCATGGAGGTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS CCA 72 bp | TGCTCTGGACAGGATAACTGCTGTCTTCTATTACAATaGGAAGGAAATACAACTCCTGCTGCCTGCGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: CSGQDNCCLLLQ*EGNTTPAACGY Trigger: ATAGCCGCAGGCAGCAGGAGTTGTATTTCCTTCCCATTGTAATAGAAGACAGCAGTTATCCTGTCCAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS TCA 72 bp | CCATGCATAGTAGGATTGCAATCAAAGCTCCAGTGCTaGGTCCTACAGGTAGAAAAATTGCTTCCACGTTGC | + |
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Preference number: 6 (lower is better) Translates to: PCIVGLQSKLQC*VLQVEKLLPRC Trigger: GCAACGTGGAAGCAATTTTTCTACCTGTAGGACTCAGCACTGGAGCTTTGATTGCAATCCTACTATGCATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS TCA 72 bp | AAAATCAGGATCTACTGCTCTTATTCTTCCAATAGCTaGGCCAACAGGGGAAGACTCGGGAACTTTCAGATG | + |
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Preference number: 6 (lower is better) Translates to: KIRIYCSYSSNS*ANRGRLGNFQM Trigger: CATCTGAAAGTTCCCGAGTCTTCCCCTGTTGGCTCAGCTATTGGAAGAATAAGAGCAGTAGATCCTGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS GCA 72 bp | TCTTCTTTAGAGGTCATAAGGGTGTCTTTCTTCCTCTaGCTCCTCAGTGCTACATACAGCACAACAATAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSLEVIRVSFFL*LLSATYSTTIA Trigger: AGCTATTGTTGTGCTGTATGTAGCACTGAGGAGGCAGAGGAAGAAAGACACCCTTATGACCTCTAAAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS CCA 72 bp | CGGGTTTCGATTCCAGCTGTGTTGTTTCTGAAGTCATaGACTGTAAAATTTGGTTTGATGACAGCCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RVSIPAVLFLKS*TVKFGLMTASG Trigger: ACCAGAGGCTGTCATCAAACCAAATTTTACAGTCCATGACTTCAGAAACAACACAGCTGGAATCGAAACCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS CAA 72 bp | AAACAGAGGGAGTCTGGTTTTATATCCCTGCGAATTTaGTTCTCTTCGATCACCTTGGGATTTCTCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: KQRESGFISLRI*FSSITLGFLRA Trigger: GGCTCTGAGAAATCCCAAGGTGATCGAAGAGAACAAAATTCGCAGGGATATAAAACCAGACTCCCTCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS TCA 72 bp | AATTGCTTCCACGTTGCAAGACAGGATGGTCCCATCTaGGTCACACCTACAAACACGAATAGTCATTGTATT | + |
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Preference number: 6 (lower is better) Translates to: NCFHVARQDGPI*VTPTNTNSHCI Trigger: AATACAATGACTATTCGTGTTTGTAGGTGTGACTCAGATGGGACCATCCTGTCTTGCAACGTGGAAGCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS TCA 72 bp | TCCCTTATGTCTGTGTTGTCTTCCACTTGTGGTCTTTaGCGAGATAAACAGAGGGAGTCTGGTTTTATATCC | + |
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Preference number: 6 (lower is better) Translates to: SLMSVLSSTCGL*RDKQRESGFIS Trigger: GGATATAAAACCAGACTCCCTCTGTTTATCTCGTCAAAGACCACAAGTGGAAGACAACACAGACATAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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| CDS CAA 72 bp | GTGTTGTTTCTGAAGTCATGGACTGTAAAATTTGGTTaGATGACAGCCTCTGGTGCTAATCTAAAGGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: VLFLKSWTVKFG*MTASGANLKEN Trigger: ATTCTCCTTTAGATTAGCACCAGAGGCTGTCATCAAACCAAATTTTACAGTCCATGACTTCAGAAACAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075132.8 ENSMUST00000227496.2 |
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