Pregenerated sensors for CDH10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022321Ensembl transcript IDs: ENSMUST00000040562.14, ENSMUST00000166873.9, ENSMUST00000176146.8
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTaGGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTATT | + |
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Preference number: 1 (lower is better) Translates to: HLQEQDVYLTEAACS*GCLRENYPAQVSFI Trigger: AATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTTTCTTCCGTTGCCTTTTGAGGGCTGCAAAGAGGACTACTATAACCAGCTCAAGGCGCCAGTGCTaGGGCCAGCGGGGAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GSFFRCLLRAAKRTTITSSRRQC*GQRGGA Trigger: TGCTCCTCCCCGCTGGCCTCAGCACTGGCGCCTTGA...GCTGGTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAAAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGAGCAGGGCTTCAGCACTACAGGACTGCATGTTGCCTTGGCTGTCACAGAGTGCTGCTCTGAATTaGGTAGTCGTTATCCGATAT | + |
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Preference number: 2 (lower is better) Translates to: GRSRASALQDCMLPWLSQSAALN*VVVIRY Trigger: ATATCGGATAACGACTACCCAATTCAGAGCAGCACT...CTGTGACAGCCAAGGCAACATGCAGTCCTGTAGTGCTGAAGCCCTGCTCCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTCTTTCTTCCGTTGCCTTTTGAGGGCTGCAAAGAGGACTACTATAACCAGTCAGCACTACAGGACTaGATGTTGCCTTGGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: RLFLPLPFEGCKEDYYNQSALQD*MLPWLS Trigger: TGACAGCCAAGGCAACATGCAGTCCTGTAGTGCTGA...CTGGTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAAAGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTTTCTTCCGTTGCCTTTTGAGGGCTGCAAAGAGGACTACTATAACCAGCTCACAGCAGCCAAACTaGAGAAAAACTTCTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GSFFRCLLRAAKRTTITSSQQPN*RKTSVH Trigger: GTGGACAGAAGTTTTTCTTCAGTTTGGCTGCTGTGA...GCTGGTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAAAGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCGGTAGGAGTCCTCCGGGGTATAAATAACGTTTCAGGAATTATATCTCGCCTGTATCAGCTGTCCTaGTCTGGCATTTTCACATAC | + |
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Preference number: 2 (lower is better) Translates to: GAVGVLRGINNVSGIISRLYQLS*SGIFTY Trigger: GTATGTGAAAATGCCAGACCAGGACAGCTGATACAG...GCGAGATATAATTCCTGAAACGTTATTTATACCCCGGAGGACTCCTACCGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| 3UTR CAA 90 bp | AAAGCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTaGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: KASFARARRVSNRSG*FVRLLKGELSCSGL Trigger: GAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGGAATATCAAATATTGTaGAGTGGAGACAGTGTCCGC | + |
|
Preference number: 2 (lower is better) Translates to: ASFARARRVSNRSGLFVREYQIL*SGDSVR Trigger: GCGGACACTGTCTCCACTTCACAATATTTGATATTC...CCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGGTCGTATATATTCCATaGGACACCCTACAGGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ASFARARRVSNRSGLFVRVVYIP*DTLQER Trigger: TCTTTCCTGTAGGGTGTCTCATGGAATATATACGAC...CCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTTTCTTCCGTTGCCTTTTGAGGGCTGCAAAGAGGACTACTATAACCAGCGTCATCTTTGTCAACTaGACTTATGGTCTGTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: GSFFRCLLRAAKRTTITSVIFVN*TYGLYQ Trigger: CTGATACAGACCATAAGTGCAGTTGACAAAGATGAC...GCTGGTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAAAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| 3UTR CAA 90 bp | GCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTaGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTATTTACTA | + |
|
Preference number: 2 (lower is better) Translates to: ARARRVSNRSGLFVR*LKGELSCSGLFYLL Trigger: TAGTAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR CAA 90 bp | ATGTCCTCCTTGGATAGAATCAGAGGCTCTTTCTTCCGTTGCCTTTaGAGGGCTGCAAAGAGGACTACTATAACCAGCAGAATAATGATG | + |
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Preference number: 2 (lower is better) Translates to: MSSLDRIRGSFFRCL*RAAKRTTITSRIMM Trigger: CATCATTATTCTGCTGGTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAAAGAGCCTCTGATTCTATCCAAGGAGGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCGAAGCGGCTTGTTCGTaGGGTTGCTTAAGGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SVFSSSYQSFICKSKTCIEAACS*GCLREN Trigger: GTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTC...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTCAAATATTGTGAAGTaGAGACAGTGTCCGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: ASFARARRVSNRSGLFVRSNIVK*RQCPQS Trigger: ACTTTGCGGACACTGTCTCCACTTCACAATATTTGA...CCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR CCA 90 bp | AGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTAAATTAAGAAATAAGTaGGAAACGTGTGCTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: SGLFVRLLKGELSCSGLFKLRNK*ETCAEW Trigger: CCACTCAGCACACGTTTCCCACTTATTTCTTAATTT...AAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR CCA 90 bp | AGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCAAATATTGTGAAGTaGAGACAGTGTCCGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: RRVSNRSGLFVRLLKGELSNIVK*RQCPQS Trigger: ACTTTGCGGACACTGTCTCCACTTCACAATATTTGA...TAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGTCGTATATATTCCATaGGACACCCTACAGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VFFVLSKLHLQEQDVYLTVVYIP*DTLQER Trigger: TCTTTCCTGTAGGGTGTCTCATGGAATATATACGAC...TGTTAGATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR GCA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATAAGGGAGAACTATCCTaGTCAGGTCTCTTTTATTTA | + |
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Preference number: 2 (lower is better) Translates to: TNACIPGCISHQLTPHVHKGELS*SGLFYL Trigger: TAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTT...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR GCA 90 bp | AAATTGCACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATATCAAAGCTTCATTTaGAAGAGCAAGACGTGTATC | + |
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Preference number: 2 (lower is better) Translates to: KLHKCLYTRLHITPTNTTYQSFI*KSKTCI Trigger: GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATA...TGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGTGCAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR CAA 90 bp | GGCTCTTTCTTCCGTTGCCTTTTGAGGGCTGCAAAGAGGACTACTATAACCAGCGGACTGCATGTTGCCTaGGCTGTCACAGGCGCACAC | + |
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Preference number: 3 (lower is better) Translates to: GSFFRCLLRAAKRTTITSGLHVA*AVTGAH Trigger: GTGTGCGCCTGTGACAGCCAAGGCAACATGCAGTCC...GCTGGTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAAAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| 3UTR TCA 72 bp | GAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTaGGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: EQDVYLTEAACS*GCLRENYPAQV Trigger: GACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR CAA 90 bp | AGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTCTAAGATGGACAACATaGAATTTCCATAGCTTTGGC | + |
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Preference number: 3 (lower is better) Translates to: SGLFVRLLKGELSCSGLFLRWTT*NFHSFG Trigger: GCCAAAGCTATGGAAATTCAATGTTGTCCATCTTAG...AAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR CCA 72 bp | ATTCTCGGAGGTAATCGTAGTTTTGGTCTCCTTCAGTaGTACCTGATTCTAAAGAGCTCAGAGATTCGGCCA | + |
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Preference number: 3 (lower is better) Translates to: ILGGNRSFGLLQ*YLILKSSEIRP Trigger: TGGCCGAATCTCTGAGCTCTTTAGAATCAGGTACCACTGAAGGAGACCAAAACTACGATTACCTCCGAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| 3UTR-3UTR CAA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATGGCTTGTTCGTGAGGTaGCTTAAGGGAGAACTATCC | + |
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Preference number: 3 (lower is better) Translates to: TNACIPGCISHQLTPHVHGLFVR*LKGELS Trigger: GGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCC...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR GCA 72 bp | GGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTaGTCAGGTCTCTTTTATTTACTAAGATGGACAACA | + |
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Preference number: 3 (lower is better) Translates to: GLFVRLLKGELS*SGLFYLLRWTT Trigger: TGTTGTCCATCTTAGTAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| 3UTR-3UTR CAA 90 bp | ATTCTAGCAGTGTTGTCTTCATTATCTTGTACTGTAAAGTTCGGATTCACAGCACCTAAGGGGTCATCTTaGTCAACTGCACTTATGGTC | + |
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Preference number: 3 (lower is better) Translates to: ILAVLSSLSCTVKFGFTAPKGSS*STALMV Trigger: GACCATAAGTGCAGTTGACAAAGATGACCCCTTAGG...TGCTGTGAATCCGAACTTTACAGTACAAGATAATGAAGACAACACTGCTAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCCTAAGATGGACAACATaGAATTTCCATAGCTTTGGC | + |
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Preference number: 3 (lower is better) Translates to: SVFSSSYQSFICKSKTCILRWTT*NFHSFG Trigger: GCCAAAGCTATGGAAATTCAATGTTGTCCATCTTAG...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR TCA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGATCAAGGCGCCAGTGCTaGGGCCAGCGGGGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: RARRVSNRSGLFVRLLKGSRRQC*GQRGGA Trigger: TGCTCCTCCCCGCTGGCCTCAGCACTGGCGCCTTGA...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR TCA 90 bp | GGGAGGAGCAGGGCTTCAGCACTACAGGACTGCATGTTGCCTTGGCTGTCACAGTCTGCAGTCATTTGCTaGATCCCAGGAGTCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GRSRASALQDCMLPWLSQSAVIC*IPGVLL Trigger: CAGAAGGACTCCTGGGATTCAGCAAATGACTGCAGA...CTGTGACAGCCAAGGCAACATGCAGTCCTGTAGTGCTGAAGCCCTGCTCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| CDS-3UTR CCA 90 bp | GGGAGGAGCAGGGCTTCAGCACTACAGGACTGCATGTTGCCTTGGCTGTCACAGCACAGCTGTGCCAACTaGAGAGGATTCAAGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: GRSRASALQDCMLPWLSQHSCAN*RGFKNS Trigger: AGAGTTCTTGAATCCTCTCCAGTTGGCACAGCTGTG...CTGTGACAGCCAAGGCAACATGCAGTCCTGTAGTGCTGAAGCCCTGCTCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| CDS-3UTR TCA 90 bp | TTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTATTTACTATCAAGGCGCCAGTGCTaGGGCCAGCGGGGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: FVRLLKGELSCSGLFYLLSRRQC*GQRGGA Trigger: TGCTCCTCCCCGCTGGCCTCAGCACTGGCGCCTTGA...TAGTAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR GCA 90 bp | AGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTACAGGACTGCATGTTaGCTTGGCTGTCACAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SGLFVRLLKGELSCSGLFYRTAC*LGCHRR Trigger: GCGCCTGTGACAGCCAAGGCAACATGCAGTCCTGTA...AAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR GCA 90 bp | GCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACACGGATCGTCAGGGTaGCAGTGCTGCTCTGAATTG | + |
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Preference number: 4 (lower is better) Translates to: ARRVSNRSGLFVRLLKGEHGSSG*QCCSEL Trigger: CAATTCAGAGCAGCACTGGCACCCTGACGATCCGTG...TTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR CCA 90 bp | GCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGGACTGCATGTTGCCTTaGCTGTCACAGGCGCACACA | + |
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Preference number: 4 (lower is better) Translates to: ASFARARRVSNRSGLFVRDCMLP*LSQAHT Trigger: TGTGTGCGCCTGTGACAGCCAAGGCAACATGCAGTC...CCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR GCA 90 bp | GGGTCATCTTTGTCAACTGCACTTATGGTCTGTATCAGCTGTCCTGGTCTGGCACACTTCCCACAGCTGTaGCAACTGGAGAGGATTCAA | + |
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Preference number: 4 (lower is better) Translates to: GSSLSTALMVCISCPGLAHFPQL*QLERIQ Trigger: TTGAATCCTCTCCAGTTGGCACAGCTGTGGGAAGTG...TGCCAGACCAGGACAGCTGATACAGACCATAAGTGCAGTTGACAAAGATGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| CDS-3UTR GCA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGATCAGGGTGCCAGTGCTaGTCTGAATTGGGTAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: RARRVSNRSGLFVRLLKGSGCQC*SELGSR Trigger: ACGACTACCCAATTCAGAGCAGCACTGGCACCCTGA...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR GCA 90 bp | GCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAATCAGGGTGCCAGTGCTaGTCTGAATTGGGTAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: ARRVSNRSGLFVRLLKGESGCQC*SELGSR Trigger: ACGACTACCCAATTCAGAGCAGCACTGGCACCCTGA...TTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR GCA 90 bp | GCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAATCGTCAGGGTGCCAGTaGTGCTCTGAATTGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ARRVSNRSGLFVRLLKGESSGCQ*CSELGS Trigger: ACTACCCAATTCAGAGCAGCACTGGCACCCTGACGA...TTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR GCA 90 bp | AGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTCAGCACTACAGGACTaGATGTTGCCTTGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SGLFVRLLKGELSCSGLFSALQD*MLPWLS Trigger: TGACAGCCAAGGCAACATGCAGTCCTGTAGTGCTGA...AAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR CCA 90 bp | GGGGCGGTAGGAGTCCTCCGGGGTATAAATAACGTTTCAGGAATTATATCTCGCCCGTGTCAGCATCAGTaGCTTTTACACTTCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: GAVGVLRGINNVSGIISRPCQHQ*LLHFPQ Trigger: CTGTGGGAAGTGTAAAAGCCACTGATGCTGACACGG...GCGAGATATAATTCCTGAAACGTTATTTATACCCCGGAGGACTCCTACCGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| CDS-3UTR CCA 90 bp | AAGGGGTCATCTTTGTCAACTGCACTTATGGTCTGTATCAGCTGTCCTGGTCTGTTTACCATCACTCCTTaGGGCACGGGATTCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KGSSLSTALMVCISCPGLFTITP*GTGFCS Trigger: ACTGCAGAATCCCGTGCCCCAAGGAGTGATGGTAAA...CAGACCAGGACAGCTGATACAGACCATAAGTGCAGTTGACAAAGATGACCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| CDS-3UTR TCA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAAGGATGCTGTAAATaGCTCTGGCGCTGTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RARRVSNRSGLFVRLLKGEGCCK*LWRCFH Trigger: ATGGAAACAGCGCCAGAGTCATTTACAGCATCCTTC...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR GCA 90 bp | AGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTACACTTCCCACAGCTGTaGCAACTGGAGAGGATTCAA | + |
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Preference number: 4 (lower is better) Translates to: RRVSNRSGLFVRLLKGELHFPQL*QLERIQ Trigger: TTGAATCCTCTCCAGTTGGCACAGCTGTGGGAAGTG...TAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR CCA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGACACAGCTGTGCCAACTaGAGAGGATTCAAGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: RARRVSNRSGLFVRLLKGHSCAN*RGFKNS Trigger: AGAGTTCTTGAATCCTCTCCAGTTGGCACAGCTGTG...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR CCA 90 bp | GCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACACAGCTGTGCCAACTaGAGAGGATTCAAGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARRVSNRSGLFVRLLKGEHSCAN*RGFKNS Trigger: AGAGTTCTTGAATCCTCTCCAGTTGGCACAGCTGTG...TTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | AGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTACCGTGTCAGCATCAGTaGCTTTTACACTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RRVSNRSGLFVRLLKGELPCQHQ*LLHFPQ Trigger: CTGTGGGAAGTGTAAAAGCCACTGATGCTGACACGG...TAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGGTCATCTTTGTCAACTGCACTTATGGTCTGTATCAGCTGTCCTGGTCTGCACATGGGTGTTTTCTaGCTCCACCTTCAGAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: KGSSLSTALMVCISCPGLHMGVF*LHLQSI Trigger: TATACTCTGAAGGTGGAGGCAGAAAACACCCATGTG...CAGACCAGGACAGCTGATACAGACCATAAGTGCAGTTGACAAAGATGACCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS-3UTR GCA 90 bp | AAATTGCACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACACACGGATCGTCAGGGTaGCAGTGCTGCTCTGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: KLHKCLYTRLHITPTNTTHGSSG*QCCSEL Trigger: CAATTCAGAGCAGCACTGGCACCCTGACGATCCGTG...TGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGTGCAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | TTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTATTTACTATACAGGACTGCATGTTaGCTTGGCTGTCACAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FVRLLKGELSCSGLFYLLYRTAC*LGCHRR Trigger: GCGCCTGTGACAGCCAAGGCAACATGCAGTCCTGTA...TAGTAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | AGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTCTGTCAAGGTCAGTATaGCGATCCAATGTAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLFVRLLKGELSCSGLFLSRSV*RSNVNL Trigger: CAGATTTACATTGGATCGCCATACTGACCTTGACAG...AAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGACTGTATCAGCTGTCCTaGTCTGGCATTTTCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: RARRVSNRSGLFVRLLKGLYQLS*SGIFTY Trigger: GTATGTGAAAATGCCAGACCAGGACAGCTGATACAG...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | AGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTAGTGCTGCTCTGAATTaGGTAGTCGTTATCCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: SGLFVRLLKGELSCSGLFSAALN*VVVIRY Trigger: ATATCGGATAACGACTACCCAATTCAGAGCAGCACT...AAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | TTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTATTTACTAGACTGCATGTTGCCTTaGCTGTCACAGGCGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: FVRLLKGELSCSGLFYLLDCMLP*LSQAHT Trigger: TGTGTGCGCCTGTGACAGCCAAGGCAACATGCAGTC...TAGTAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCGACATCGGTGTTATCTaGGGCGGTAGGAGTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVFSSSYQSFICKSKTCIDIGVI*GGRSPP Trigger: CGGAGGACTCCTACCGCCCCAGATAACACCGATGTC...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | AGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTTTGGTCTCCTTCAGTaGTACCTGATTCTAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLFVRLLKGELSCSGLFFGLLQ*YLILKS Trigger: GCTCTTTAGAATCAGGTACCACTGAAGGAGACCAAA...AAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| 3UTR CAA 72 bp | AGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTaGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRVSNRSGLFVR*LKGELSCSGLF Trigger: AAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| 3UTR CAA 72 bp | TTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTaGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FARARRVSNRSG*FVRLLKGELSC Trigger: GCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR TCA 90 bp | AGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCACGATGTTGTCTCTaGTGTCCTCCTTGGATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRVSNRSGLFVRLLKGELSRCCL*CPPWIE Trigger: TTCTATCCAAGGAGGACATCAGAGACAACATCGTGA...TAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | AGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTGTCATCTTTGTCAACTaGACTTATGGTCTGTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLFVRLLKGELSCSGLFVIFVN*TYGLYQ Trigger: CTGATACAGACCATAAGTGCAGTTGACAAAGATGAC...AAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | TTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTATTTACTATCGTCAGGGTGCCAGTaGTGCTCTGAATTGGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FVRLLKGELSCSGLFYLLSSGCQ*CSELGS Trigger: ACTACCCAATTCAGAGCAGCACTGGCACCCTGACGA...TAGTAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGCTCTCGGTTCATATTTaGCAGAGCTGTTCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASFARARRVSNRSGLFVRLSVHI*QSCSDD Trigger: ATCATCAGAACAGCTCTGCCAAATATGAACCGAGAG...CCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGGTCATCTTTGTCAACTGCACTTATGGTCTGTATCAGCTGTCCTGGTCTGCTCTCGGTTCATATTTaGCAGAGCTGTTCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KGSSLSTALMVCISCPGLLSVHI*QSCSDD Trigger: ATCATCAGAACAGCTCTGCCAAATATGAACCGAGAG...CAGACCAGGACAGCTGATACAGACCATAAGTGCAGTTGACAAAGATGACCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTGTCAAGGTCAGTATaGCGATCCAATGTAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARRVSNRSGLFVRLLKGELSRSV*RSNVNL Trigger: CAGATTTACATTGGATCGCCATACTGACCTTGACAG...TTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAAAGTGCTGCTCTGAATTaGGTAGTCGTTATCCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: ARRVSNRSGLFVRLLKGESAALN*VVVIRY Trigger: ATATCGGATAACGACTACCCAATTCAGAGCAGCACT...TTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGACATCGGTGTTATCTaGGGCGGTAGGAGTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VFFVLSKLHLQEQDVYLTDIGVI*GGRSPP Trigger: CGGAGGACTCCTACCGCCCCAGATAACACCGATGTC...TGTTAGATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| 3UTR CAA 72 bp | TTGGATAGAATCAGAGGCTCTTTCTTCCGTTGCCTTTaGAGGGCTGCAAAGAGGACTACTATAACCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDRIRGSFFRCL*RAAKRTTITSR Trigger: TCTGCTGGTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAAAGAGCCTCTGATTCTATCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS-3UTR TCA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATTCTGCAGTCATTTGCTaGATCCCAGGAGTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TNACIPGCISHQLTPHVHSAVIC*IPGVLL Trigger: CAGAAGGACTCCTGGGATTCAGCAAATGACTGCAGA...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR TCA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATTCTTCCGTTGCCTTTTaGGGGCTGCAAAGAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: TNACIPGCISHQLTPHVHSSVAF*GLQRGL Trigger: TAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGA...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | GGGTCATCTTTGTCAACTGCACTTATGGTCTGTATCAGCTGTCCTGGTCTGGCAAGAATCAGGATCTCTTaGCATTACAGTACCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSLSTALMVCISCPGLARIRIS*HYSTND Trigger: ATCATTGGTACTGTAATGGCAAGAGATCCTGATTCT...TGCCAGACCAGGACAGCTGATACAGACCATAAGTGCAGTTGACAAAGATGACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAAGATGATACCTGTTTCTaGTTCCACAGAGAAATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARRVSNRSGLFVRLLKGEDDTCF*FHREIR Trigger: CCTTATTTCTCTGTGGAACCAGAAACAGGTATCATC...TTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGGATGATACCTGTTTCTaGTTCCACAGAGAAATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFARARRVSNRSGLFVRDDTCF*FHREIR Trigger: CCTTATTTCTCTGTGGAACCAGAAACAGGTATCATC...CCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATCCGTGTCAGCATCAGTaGCTTTTACACTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TNACIPGCISHQLTPHVHPCQHQ*LLHFPQ Trigger: CTGTGGGAAGTGTAAAAGCCACTGATGCTGACACGG...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| 3UTR CAA 72 bp | CTGAAGAAAAACTTCTGTCCACCTAAGGGGTCATCTTaGTCAACTGCACTTATGGTCTGTATCAGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKKNFCPPKGSS*STALMVCISCP Trigger: AGGACAGCTGATACAGACCATAAGTGCAGTTGACAAAGATGACCCCTTAGGTGGACAGAAGTTTTTCTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTCTGCAGTCATTTGCTaGATCCCAGGAGTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVFSSSYQSFICKSKTCISAVIC*IPGVLL Trigger: CAGAAGGACTCCTGGGATTCAGCAAATGACTGCAGA...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR TCA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATGAAGGATGCTGTAAATaGCTCTGGCGCTGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TNACIPGCISHQLTPHVHEGCCK*LWRCFH Trigger: ATGGAAACAGCGCCAGAGTCATTTACAGCATCCTTC...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTCTTCCGTTGCCTTTTaGGGGCTGCAAAGAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: SVFSSSYQSFICKSKTCISSVAF*GLQRGL Trigger: TAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGA...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGGGTCTGAATGAAGCTTaGCTACATATTGATAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASFARARRVSNRSGLFVRGLNEA*LHIDNQ Trigger: CTGATTATCAATATGTAGGCAAGCTTCATTCAGACC...CCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCCACTTCCCACAGCTGTaGCAACTGGAGAGGATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVFSSSYQSFICKSKTCIHFPQL*QLERIQ Trigger: TTGAATCCTCTCCAGTTGGCACAGCTGTGGGAAGTG...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAAAGAATCAGGATCTCTTaGCATTACAGTACCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARRVSNRSGLFVRLLKGERIRIS*HYSTND Trigger: ATCATTGGTACTGTAATGGCAAGAGATCCTGATTCT...TTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTCAGCACTACAGGACTaGATGTTGCCTTGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVFSSSYQSFICKSKTCISALQD*MLPWLS Trigger: TGACAGCCAAGGCAACATGCAGTCCTGTAGTGCTGA...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTTTACCATCACTCCTTaGGGCACGGGATTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVFSSSYQSFICKSKTCIFTITP*GTGFCS Trigger: ACTGCAGAATCCCGTGCCCCAAGGAGTGATGGTAAA...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR TCA 90 bp | AGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTACCATTACAGTACCAATaGTTGTGCCTACTTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RRVSNRSGLFVRLLKGELPLQYQ*LCLLQY Trigger: ATATTGAAGTAGGCACAATCATTGGTACTGTAATGG...TAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR TCA 90 bp | TTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTATTTACTATCACAGCAGCCAAACTaGAGAAAAACTTCTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVRLLKGELSCSGLFYLLSQQPN*RKTSVH Trigger: GTGGACAGAAGTTTTTCTTCAGTTTGGCTGCTGTGA...TAGTAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR TCA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATTCACAGCAGCCAAACTaGAGAAAAACTTCTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TNACIPGCISHQLTPHVHSQQPN*RKTSVH Trigger: GTGGACAGAAGTTTTTCTTCAGTTTGGCTGCTGTGA...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR TCA 90 bp | AAATTGCACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATCACGATGTTGTCTCTaGTGTCCTCCTTGGATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLHKCLYTRLHITPTNTTSRCCL*CPPWIE Trigger: TTCTATCCAAGGAGGACATCAGAGACAACATCGTGA...TGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGTGCAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | AGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTAGGTCTGAATGAAGCTTaGCTACATATTGATAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRVSNRSGLFVRLLKGELGLNEA*LHIDNQ Trigger: CTGATTATCAATATGTAGGCAAGCTTCATTCAGACC...TAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | AAATTGCACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATCTGTAGCTGTGACTTaGACCACAGAAGTACCTACA | + |
|
Preference number: 4 (lower is better) Translates to: KLHKCLYTRLHITPTNTTSVAVT*TTEVPT Trigger: TGTAGGTACTTCTGTGGTGCAAGTCACAGCTACAGA...TGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGTGCAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | AAATTGCACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACACACATGGGTGTTTTCTaGCTCCACCTTCAGAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: KLHKCLYTRLHITPTNTTHMGVF*LHLQSI Trigger: TATACTCTGAAGGTGGAGGCAGAAAACACCCATGTG...TGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGTGCAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATCACATGGGTGTTTTCTaGCTCCACCTTCAGAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: TNACIPGCISHQLTPHVHHMGVF*LHLQSI Trigger: TATACTCTGAAGGTGGAGGCAGAAAACACCCATGTG...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTAACATTTACCATCACTCCTTaGGGCACGGGATTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFFVLSKLHLQEQDVYLTFTITP*GTGFCS Trigger: ACTGCAGAATCCCGTGCCCCAAGGAGTGATGGTAAA...TGTTAGATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | AAATTGCACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACACTGTATCAGCTGTCCTaGTCTGGCATTTTCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: KLHKCLYTRLHITPTNTTLYQLS*SGIFTY Trigger: GTATGTGAAAATGCCAGACCAGGACAGCTGATACAG...TGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGTGCAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | AAATTGCACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATTGCCTTTTGAGGGCTaGAAAGAGGACTACTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: KLHKCLYTRLHITPTNTTLPFEG*KEDYYN Trigger: GTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAA...TGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGTGCAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | TTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTATTTACTATTTGGTCTCCTTCAGTaGTACCTGATTCTAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FVRLLKGELSCSGLFYLLFGLLQ*YLILKS Trigger: GCTCTTTAGAATCAGGTACCACTGAAGGAGACCAAA...TAGTAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTAACATCTGTAGCTGTGACTTaGACCACAGAAGTACCTACA | + |
|
Preference number: 4 (lower is better) Translates to: VFFVLSKLHLQEQDVYLTSVAVT*TTEVPT Trigger: TGTAGGTACTTCTGTGGTGCAAGTCACAGCTACAGA...TGTTAGATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | TTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTATTTACTAGTCATCTTTGTCAACTaGACTTATGGTCTGTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVRLLKGELSCSGLFYLLVIFVN*TYGLYQ Trigger: CTGATACAGACCATAAGTGCAGTTGACAAAGATGAC...TAGTAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTTGCCTTTTGAGGGCTaGAAAGAGGACTACTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVFSSSYQSFICKSKTCILPFEG*KEDYYN Trigger: GTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAA...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCCTCTCGGTTCATATTTaGCAGAGCTGTTCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVFSSSYQSFICKSKTCILSVHI*QSCSDD Trigger: ATCATCAGAACAGCTCTGCCAAATATGAACCGAGAG...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR TCA 90 bp | TCAGTGTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCCCATTACAGTACCAATaGTTGTGCCTACTTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SVFSSSYQSFICKSKTCIPLQYQ*LCLLQY Trigger: ATATTGAAGTAGGCACAATCATTGGTACTGTAATGG...GATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAACACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR TCA 90 bp | ATTCTAGCAGTGTTGTCTTCATTATCTTGTACTGTAAAGTTCGGATTCACAGCACCATTACAGTACCAATaGTTGTGCCTACTTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: ILAVLSSLSCTVKFGFTAPLQYQ*LCLLQY Trigger: ATATTGAAGTAGGCACAATCATTGGTACTGTAATGG...TGCTGTGAATCCGAACTTTACAGTACAAGATAATGAAGACAACACTGCTAGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTAGCAGTGTTGTCTTCATTATCTTGTACTGTAAAGTTCGGATTCACAGCAGGTCTGAATGAAGCTTaGCTACATATTGATAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILAVLSSLSCTVKFGFTAGLNEA*LHIDNQ Trigger: CTGATTATCAATATGTAGGCAAGCTTCATTCAGACC...TGCTGTGAATCCGAACTTTACAGTACAAGATAATGAAGACAACACTGCTAGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTAACAAGAATCAGGATCTCTTaGCATTACAGTACCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFFVLSKLHLQEQDVYLTRIRIS*HYSTND Trigger: ATCATTGGTACTGTAATGGCAAGAGATCCTGATTCT...TGTTAGATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAAGGACTGCATGTTGCCTaGGCTGTCACAGGCGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: ARRVSNRSGLFVRLLKGEGLHVA*AVTGAH Trigger: GTGTGCGCCTGTGACAGCCAAGGCAACATGCAGTCC...TTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTACAGGACTGCATGTaGCCTTGGCTGTCACAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARRVSNRSGLFVRLLKGELQDCM*PWLSQA Trigger: CGCCTGTGACAGCCAAGGCAACATGCAGTCCTGTAG...TTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGATTTTACCATCACTCCTaGGGGCACGGGATTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RARRVSNRSGLFVRLLKGFYHHS*GHGILQ Trigger: CTGCAGAATCCCGTGCCCCAAGGAGTGATGGTAAAA...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGGATTCTGCAGTCATTaGCTGAATCCCAGGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RARRVSNRSGLFVRLLKGGFCSH*LNPRSP Trigger: AGGACTCCTGGGATTCAGCAAATGACTGCAGAATCC...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGGTCATCTTTGTCAACTGCACTTATGGTCTGTATCAGCTGTCCTGGTCTGGGATTCTGCAGTCATTaGCTGAATCCCAGGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGSSLSTALMVCISCPGLGFCSH*LNPRSP Trigger: AGGACTCCTGGGATTCAGCAAATGACTGCAGAATCC...CAGACCAGGACAGCTGATACAGACCATAAGTGCAGTTGACAAAGATGACCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS-3UTR CAA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATGGACTGCATGTTGCCTaGGCTGTCACAGGCGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: TNACIPGCISHQLTPHVHGLHVA*AVTGAH Trigger: GTGTGCGCCTGTGACAGCCAAGGCAACATGCAGTCC...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTCTTCCGTTGCCTTTaGAGGGCTGCAAAGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: ASFARARRVSNRSGLFVRFFRCL*RAAKRT Trigger: AGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAA...CCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGATTCTTCCGTTGCCTTTaGAGGGCTGCAAAGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RARRVSNRSGLFVRLLKGFFRCL*RAAKRT Trigger: AGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAA...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS TCA 90 bp | ATTTTACCATCACTCCTTGGGGCACGGGATTCTGCAGTCATTTGCTaGATCCCAGGAGTCCTTCTGAACGTTAATTCTGGACAGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILPSLLGARDSAVIC*IPGVLLNVNSGQQK Trigger: CTTCTGCTGTCCAGAATTAACGTTCAGAAGGACTCCTGGGATTCAGCAAATGACTGCAGAATCCCGTGCCCCAAGGAGTGATGGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 ENSMUST00000176146.8 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGACCTAAGGGGTCATCTTaGTCAACTGCACTTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RARRVSNRSGLFVRLLKGPKGSS*STALMV Trigger: GACCATAAGTGCAGTTGACAAAGATGACCCCTTAGG...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR CAA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATCTACAGGACTGCATGTaGCCTTGGCTGTCACAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TNACIPGCISHQLTPHVHLQDCM*PWLSQA Trigger: CGCCTGTGACAGCCAAGGCAACATGCAGTCCTGTAG...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAGGTAATCGTAGTTTaGGTCTCCTTCAGTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: RARRVSNRSGLFVRLLKGEVIVV*VSFSGT Trigger: GGTACCACTGAAGGAGACCAAAACTACGATTACCTC...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAAATAAGGCTGCCCTaGAAGGATGCTGTAAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: RARRVSNRSGLFVRLLKGEIRLP*KDAVND Trigger: GTCATTTACAGCATCCTTCAAGGGCAGCCTTATTTC...TCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR CAA 90 bp | AGGCTCTTTCTTCCGTTGCCTTTTGAGGGCTGCAAAGAGGACTACTATAACCAGGAAATAAGGCTGCCCTaGAAGGATGCTGTAAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLFLPLPFEGCKEDYYNQEIRLP*KDAVND Trigger: GTCATTTACAGCATCCTTCAAGGGCAGCCTTATTTC...CTGGTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAAAGAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS-3UTR CAA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATTTTTACCATCACTCCTaGGGGCACGGGATTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TNACIPGCISHQLTPHVHFYHHS*GHGILQ Trigger: CTGCAGAATCCCGTGCCCCAAGGAGTGATGGTAAAA...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS-3UTR CAA 90 bp | GGCTCTTTCTTCCGTTGCCTTTTGAGGGCTGCAAAGAGGACTACTATAACCAGCACCTGGTACTGTTCTTaGTTCTCTCGGTTCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: GSFFRCLLRAAKRTTITSTWYCS*FSRFIF Trigger: AAATATGAACCGAGAGAACAAAGAACAGTACCAGGT...GCTGGTTATAGTAGTCCTCTTTGCAGCCCTCAAAAGGCAACGGAAGAAAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS-3UTR CAA 90 bp | AAATTGCACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACAGGATTCTGCAGTCATTaGCTGAATCCCAGGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLHKCLYTRLHITPTNTTGFCSH*LNPRSP Trigger: AGGACTCCTGGGATTCAGCAAATGACTGCAGAATCC...TGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGTGCAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGCTCTATCAATTCTTCTaGTGGCATGAATATCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASFARARRVSNRSGLFVRLYQFF*WHEYHL Trigger: CAGGTGATATTCATGCCACAAGAAGAATTGATAGAG...CCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGACCTGGTACTGTTCTTaGTTCTCTCGGTTCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: ASFARARRVSNRSGLFVRTWYCS*FSRFIF Trigger: AAATATGAACCGAGAGAACAAAGAACAGTACCAGGT...CCTCACGAACAAGCCGCTTCTGTTAGATACACGTCTTGCTCTTGCAAATGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | AGACGTGTATCTAACAGAAGCGGCTTGTTCGTGAGGTTGCTTAAGGGAGAACTACACGATCAAGTGGCTTaGATGTATAAAGCGATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRVSNRSGLFVRLLKGELHDQVA*MYKAIH Trigger: ATGGATCGCTTTATACATCAAAGCCACTTGATCGTG...TAGTTCTCCCTTAAGCAACCTCACGAACAAGCCGCTTCTGTTAGATACACGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS TCA 90 bp | CTACTTCAATATCCTCATGAACCTCAAACAGATAGGAGGATCGACTaGAAACAGGAGGCTCGTCCACGTCTTCTATGGAGATTTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LLQYPHEPQTDRRID*KQEARPRLLWRFSQ Trigger: TTGTGAAAATCTCCATAGAAGACGTGGACGAGCCTCCTGTTTTCAGTCGATCCTCCTATCTGTTTGAGGTTCATGAGGATATTGAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 ENSMUST00000176146.8 |
||
| CDS-3UTR CAA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATCCTAAGGGGTCATCTTaGTCAACTGCACTTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TNACIPGCISHQLTPHVHPKGSS*STALMV Trigger: GACCATAAGTGCAGTTGACAAAGATGACCCCTTAGG...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATGAAATAAGGCTGCCCTaGAAGGATGCTGTAAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: TNACIPGCISHQLTPHVHEIRLP*KDAVND Trigger: GTCATTTACAGCATCCTTCAAGGGCAGCCTTATTTC...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | ACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACATGTACATCACGATCAAGTGGCTTaGATGTATAAAGCGATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TNACIPGCISHQLTPHVHHDQVA*MYKAIH Trigger: ATGGATCGCTTTATACATCAAAGCCACTTGATCGTG...ATGTACATGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTCTTCGTCTTATCAAAGCTTCATTTGCAAGAGCAAGACGTGTATCTAACAGAGGTAATCGTAGTTTaGGTCTCCTTCAGTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: VFFVLSKLHLQEQDVYLTEVIVV*VSFSGT Trigger: GGTACCACTGAAGGAGACCAAAACTACGATTACCTC...TGTTAGATACACGTCTTGCTCTTGCAAATGAAGCTTTGATAAGACGAAGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS GCA 90 bp | ATCCAATGTAAATCTGATGGGACTGGATGTAGAATCAGGATCTCTTaGCATTACAGTACCAATGATTGTGCCTACTTCAATATCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: IQCKSDGTGCRIRIS*HYSTNDCAYFNILM Trigger: CATGAGGATATTGAAGTAGGCACAATCATTGGTACTGTAATGGCAAGAGATCCTGATTCTACATCCAGTCCCATCAGATTTACATTGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGAGGTTGCTTAAGGGAGAACTATCCTGCTCAGGTCTCTTTTATTTACTACTCTATCAATTCTTCTaGTGGCATGAATATCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FVRLLKGELSCSGLFYLLLYQFF*WHEYHL Trigger: CAGGTGATATTCATGCCACAAGAAGAATTGATAGAG...TAGTAAATAAAAGAGACCTGAGCAGGATAGTTCTCCCTTAAGCAACCTCACGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | AAATTGCACAAATGCTTGTATACCAGGCTGCATATCACACCAACTAACACCACAACCTGGTACTGTTCTTaGTTCTCTCGGTTCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: KLHKCLYTRLHITPTNTTTWYCS*FSRFIF Trigger: AAATATGAACCGAGAGAACAAAGAACAGTACCAGGT...TGTGGTGTTAGTTGGTGTGATATGCAGCCTGGTATACAAGCATTTGTGCAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
||
| CDS-3UTR CAA 90 bp | ATTCTAGCAGTGTTGTCTTCATTATCTTGTACTGTAAAGTTCGGATTCACAGCACTCTATCAATTCTTCTaGTGGCATGAATATCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILAVLSSLSCTVKFGFTALYQFF*WHEYHL Trigger: CAGGTGATATTCATGCCACAAGAAGAATTGATAGAG...TGCTGTGAATCCGAACTTTACAGTACAAGATAATGAAGACAACACTGCTAGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
||
| CDS TCA 72 bp | ATTCTGCAGTCATTTGCTGAATCCCAGGAGTCCTTCTaGACGTTAATTCTGGACAGCAGAAGTGGGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ILQSFAESQESF*TLILDSRSGAG Trigger: GCCTGCCCCACTTCTGCTGTCCAGAATTAACGTTCAGAAGGACTCCTGGGATTCAGCAAATGACTGCAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 ENSMUST00000176146.8 |
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| CDS TCA 72 bp | TCACTCCTTGGGGCACGGGATTCTGCAGTCATTTGCTaGATCCCAGGAGTCCTTCTGAACGTTAATTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SLLGARDSAVIC*IPGVLLNVNSG Trigger: TCCAGAATTAACGTTCAGAAGGACTCCTGGGATTCAGCAAATGACTGCAGAATCCCGTGCCCCAAGGAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 ENSMUST00000176146.8 |
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| CDS GCA 72 bp | AAGGATTTTACCATCACTCCTTGGGGCACGGGATTCTaGAGTCATTTGCTGAATCCCAGGAGTCCTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: KDFTITPWGTGF*SHLLNPRSPSE Trigger: TTCAGAAGGACTCCTGGGATTCAGCAAATGACTGCAGAATCCCGTGCCCCAAGGAGTGATGGTAAAATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 ENSMUST00000176146.8 |
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| CDS TCA 72 bp | TATCCTCATGAACCTCAAACAGATAGGAGGATCGACTaGAAACAGGAGGCTCGTCCACGTCTTCTATGGAGA | + |
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Preference number: 6 (lower is better) Translates to: YPHEPQTDRRID*KQEARPRLLWR Trigger: TCTCCATAGAAGACGTGGACGAGCCTCCTGTTTTCAGTCGATCCTCCTATCTGTTTGAGGTTCATGAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 ENSMUST00000176146.8 |
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| CDS CCA 72 bp | ATCAGTGGCTTTTACACTTCCCACAGCTGTGCCAACTaGAGAGGATTCAAGAACTCTGAGATGGATGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: ISGFYTSHSCAN*RGFKNSEMDGV Trigger: AACACCATCCATCTCAGAGTTCTTGAATCCTCTCCAGTTGGCACAGCTGTGGGAAGTGTAAAAGCCACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 ENSMUST00000176146.8 |
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| CDS GCA 72 bp | AAATCTGATGGGACTGGATGTAGAATCAGGATCTCTTaGCATTACAGTACCAATGATTGTGCCTACTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: KSDGTGCRIRIS*HYSTNDCAYFN Trigger: ATTGAAGTAGGCACAATCATTGGTACTGTAATGGCAAGAGATCCTGATTCTACATCCAGTCCCATCAGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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| CDS GCA 72 bp | TTATCTGATGGGACTGGATGTAGAATCAGGATCTCTTaGCATTACAGTACCAATGATTGTGCCTACTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: LSDGTGCRIRIS*HYSTNDCAYFN Trigger: ATTGAAGTAGGCACAATCATTGGTACTGTAATGGCAAGAGATCCTGATTCTACATCCAGTCCCATCAGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176146.8 |
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| CDS CAA 72 bp | ACAAAAACAGACACACGAGTTGTCTCTTTAGGATTATaGATCTCAGCAGCTATAACGGTAAGATTGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: TKTDTRVVSLGL*ISAAITVRLCH Trigger: ATGGCACAATCTTACCGTTATAGCTGCTGAGATCAATAATCCTAAAGAGACAACTCGTGTGTCTGTTTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040562.14 ENSMUST00000166873.9 |
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