Pregenerated sensors for CDCP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047636Ensembl transcript IDs: ENSMUST00000062495.3, ENSMUST00000221740.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACCAGCTTCCCAGCCACCTCTGCAGAAAAGCATGGCCACGTGACTaGAACCACAGGGACCCAGGACAAAGCATTGAGAGCGCTTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: YQLPSHLCRKAWPRD*NHRDPGQSIESALE Trigger: TTCCAAAGCGCTCTCAATGCTTTGTCCTGGGTCCCTGTGGTTTCAGTCACGTGGCCATGCTTTTCTGCAGAGGTGGCTGGGAAGCTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR-3UTR CCA 90 bp | CACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTGCTCTGCTGCAGGCAAGTCTGGTaGCATCTCAGTGTTTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: HLSCPFPALAVDRMPVLCCRQVW*HLSVFA Trigger: GGCAAAAACACTGAGATGCCACCAGACTTGCCTGCA...GCAGAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR-3UTR CCA 90 bp | GTTGCAAACATAAGGATCTCAGCGGTGCCCTTAGGAAATTCCGAGTCCCTGGCCGAGGCAGAGAGCCCATaGGAAAGGGAGCGAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: VANIRISAVPLGNSESLAEAESP*ERERGR Trigger: CCTACCTCGCTCCCTTTCCCATGGGCTCTCTGCCTC...GGCCAGGGACTCGGAATTTCCTAAGGGCACCGCTGAGATCCTTATGTTTGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR-3UTR TCA 90 bp | CGTGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCAGTGTTTTTGCCTCCTaGCTGTTGATAACTTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: RGCHLSCPFPALAVDRMPSVFAS*LLITWH Trigger: ATGCCAAGTTATCAACAGTCAGGAGGCAAAAACACT...GGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGCAAACATAAGGATCTCAGCGGTGCCCTTAGGAAATTCCGAGTCCCTGGCCGCATCTCAGTGTTTTTaGCTCCTGACTGTTGATAAC | + |
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Preference number: 2 (lower is better) Translates to: VANIRISAVPLGNSESLAASQCF*LLTVDN Trigger: GTTATCAACAGTCAGGAGGCAAAAACACTGAGATGC...GGCCAGGGACTCGGAATTTCCTAAGGGCACCGCTGAGATCCTTATGTTTGCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR CCA 72 bp | CTCGTGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTaGCTGTGGACAGGATGCCCGTGCTCTGCAGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: LVAATSLVRSQP*LWTGCPCSAEV Trigger: AACTTCTGCAGAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCACGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR CCA 72 bp | GCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTaGACAGGATGCCCGTGCTCTGCAGAAGTTCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: AATSLVRSQPWL*TGCPCSAEVLL Trigger: CAACAGAACTTCTGCAGAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR CCA 72 bp | TGGAAGGCTCGGGCTTTCTGGATAACGGGATTCTCGTaGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: WKARAFWITGFS*LPPLLSVPSLG Trigger: GCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCACGAGAATCCCGTTATCCAGAAAGCCCGAGCCTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR CCA 72 bp | ACCACAGGGACCCAGGACAAAGCATTGAGAGCGCTTTaGAAGGCTCGGGCTTTCTGGATAACGGGATTCTCG | + |
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Preference number: 3 (lower is better) Translates to: TTGTQDKALRAL*KARAFWITGFS Trigger: CGAGAATCCCGTTATCCAGAAAGCCCGAGCCTTCCAAAGCGCTCTCAATGCTTTGTCCTGGGTCCCTGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR GCA 72 bp | TTCCCAGCCTTGGCTGTGGACAGGATGCCCGTGCTCTaGAGAAGTTCTGTTGCAAACATAAGGATCTCAGCG | + |
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Preference number: 3 (lower is better) Translates to: FPALAVDRMPVL*RSSVANIRISA Trigger: CGCTGAGATCCTTATGTTTGCAACAGAACTTCTGCAGAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR-3UTR CAA 90 bp | TGCAAACATAAGGATCTCAGCGGTGCCCTTAGGAAATTCCGAGTCCCTGGCCCCCTGACTGTTGATAACTaGGCATATTGTGTGCATCAG | + |
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Preference number: 3 (lower is better) Translates to: CKHKDLSGALRKFRVPGPLTVDN*AYCVHQ Trigger: CTGATGCACACAATATGCCAAGTTATCAACAGTCAG...GGGGCCAGGGACTCGGAATTTCCTAAGGGCACCGCTGAGATCCTTATGTTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR TCA 72 bp | CACCTTAGTACCCTTTGTCCAGCTAGCACTTCTGAATaGTGCAGGCAAGTCTGGTGGCATCTCAGTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: HLSTLCPASTSE*CRQVWWHLSVF Trigger: AAAAACACTGAGATGCCACCAGACTTGCCTGCATCATTCAGAAGTGCTAGCTGGACAAAGGGTACTAAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR TCA 72 bp | AGGCAAGTCTGGTGGCATCTCAGTGTTTTTGCCTCCTaGCTGTTGATAACTTGGCATATTGTGTGCATCAGT | + |
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Preference number: 3 (lower is better) Translates to: RQVWWHLSVFAS*LLITWHIVCIS Trigger: ACTGATGCACACAATATGCCAAGTTATCAACAGTCAGGAGGCAAAAACACTGAGATGCCACCAGACTTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR GCA 72 bp | ATGATGCAGGCAAGTCTGGTGGCATCTCAGTGTTTTTaGCTCCTGACTGTTGATAACTTGGCATATTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: MMQASLVASQCF*LLTVDNLAYCV Trigger: CACACAATATGCCAAGTTATCAACAGTCAGGAGGCAAAAACACTGAGATGCCACCAGACTTGCCTGCATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR CCA 72 bp | ATAACTTGGCATATTGTGTGCATCAGTCCTGGAAACTaGATCAAATATCCAAGAGGCAGAGAGCCCATGGGA | + |
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Preference number: 3 (lower is better) Translates to: ITWHIVCISPGN*IKYPRGREPMG Trigger: TCCCATGGGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAATATGCCAAGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR CCA 72 bp | ACTGTTGATAACTTGGCATATTGTGTGCATCAGTCCTaGAAACTGGATCAAATATCCAAGAGGCAGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: TVDNLAYCVHQS*KLDQISKRQRA Trigger: GGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAATATGCCAAGTTATCAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR TCA 90 bp | TGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTGCTCCCCAGGGTAGGCGACTaGGTGGGGTCTGGAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: CHLSCPFPALAVDRMPVLPRVGD*VGSGGV Trigger: GACTCCTCCAGACCCCACTCAGTCGCCTACCCTGGG...GAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR TCA 90 bp | TTCTCGTGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCTGCTGAGAACCCCTaGCAGGCCGGTCAAGACACC | + |
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Preference number: 4 (lower is better) Translates to: FSWLPPLLSVPSLGCGQDAAENP*QAGQDT Trigger: GGTGTCTTGACCGGCCTGTCAGGGGTTCTCAGCAGC...ATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCACGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | TGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTACACCTTCCATGGCTTaGGTCCCAGGATCGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: WLPPLLSVPSLGCGQDARTPSMA*VPGSES Trigger: GGACTCCGATCCTGGGACCCAAGCCATGGAAGGTGT...ACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | CGTGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCCAGGGTACTGTGGGCTaGAGAAGTTTCCACGCACAG | + |
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Preference number: 4 (lower is better) Translates to: RGCHLSCPFPALAVDRMPQGTVG*RSFHAQ Trigger: CTGTGCGTGGAAACTTCTCCAGCCCACAGTACCCTG...GGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | CACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTGCTCTGCAGCAGGAGCAGGACCTaGTTGCGACTCGAGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: HLSCPFPALAVDRMPVLCSRSRT*LRLEVT Trigger: TGTCACCTCGAGTCGCAACCAGGTCCTGCTCCTGCT...GCAGAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR CAA 72 bp | TCTCGTGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTaGGCTGTGGACAGGATGCCCGTGCTCTGCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: SRGCHLSCPFPA*AVDRMPVLCRS Trigger: ACTTCTGCAGAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCACGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR GCA 90 bp | TGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTGGCCCCATCAAAGGCTaGCAGATGGTCGAAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: WLPPLLSVPSLGCGQDARGPIKG*QMVEVT Trigger: TGTGACTTCGACCATCTGGCAGCCTTTGATGGGGCC...ACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR GCA 90 bp | TGCAAACATAAGGATCTCAGCGGTGCCCTTAGGAAATTCCGAGTCCCTGGCCCCCCCTGCCGGAGGTGCTaGGGTCAGTGTGCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CKHKDLSGALRKFRVPGPPCRRC*GQCAAG Trigger: TCCTGCTGCACACTGACCGCAGCACCTCCGGCAGGG...GGGGCCAGGGACTCGGAATTTCCTAAGGGCACCGCTGAGATCCTTATGTTTGCA 60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | TGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTTCCAGGTCAAAGGCGTaGAAGGTGAGCAGCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: WLPPLLSVPSLGCGQDARSRSKA*KVSSTE Trigger: CTCTGTGCTGCTCACCTTCCACGCCTTTGACCTGGA...ACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | TTCTCGTGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGGCGCCAGGGTACTGTaGGCTGGAGAAGTTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: FSWLPPLLSVPSLGCGQDGARVL*AGEVST Trigger: CGTGGAAACTTCTCCAGCCCACAGTACCCTGGCGCC...ATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCACGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR TCA 90 bp | TGCAAACATAAGGATCTCAGCGGTGCCCTTAGGAAATTCCGAGTCCCTGGCCCCGTTCCCAGATGGCGCTaGGAGCACACCCCCACACTT | + |
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Preference number: 4 (lower is better) Translates to: CKHKDLSGALRKFRVPGPVPRWR*EHTPTL Trigger: AAGTGTGGGGGTGTGCTCTCAGCGCCATCTGGGAAC...GGGGCCAGGGACTCGGAATTTCCTAAGGGCACCGCTGAGATCCTTATGTTTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR TCA 90 bp | AGCTTCCCAGCCACCTCTGCAGAAAAGCATGGCCACGTGACTGAAACCACAGGGCCACGAACACCAACTTaGCAGCAGCAGGTCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SFPATSAEKHGHVTETTGPRTPT*QQQVLR Trigger: CCTCAGGACCTGCTGCTGTCAAGTTGGTGTTCGTGG...CCCTGTGGTTTCAGTCACGTGGCCATGCTTTTCTGCAGAGGTGGCTGGGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR GCA 90 bp | GTTGCAAACATAAGGATCTCAGCGGTGCCCTTAGGAAATTCCGAGTCCCTGGCCGTGCTGCGGTCAGTGTaGAGCAGGAGCAGGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: VANIRISAVPLGNSESLAVLRSV*SRSRTW Trigger: CCAGGTCCTGCTCCTGCTGCACACTGACCGCAGCAC...GGCCAGGGACTCGGAATTTCCTAAGGGCACCGCTGAGATCCTTATGTTTGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | ATTGTGTGCATCAGTCCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGCCCGGCGGTGGGGGCACCTaGCCACAGAACCTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: IVCISPGNWIKYPRGREPGGGGT*PQNLPS Trigger: GCTGGGCAGGTTCTGTGGCCAGGTGCCCCCACCGCC...GGGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | TTCTCGTGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATTCGCTGCCCTCAACCTaGAAGTCCACGAACACCAAC | + |
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Preference number: 4 (lower is better) Translates to: FSWLPPLLSVPSLGCGQDSLPST*KSTNTN Trigger: GTTGGTGTTCGTGGACTTCCAGGTTGAGGGCAGCGA...ATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCACGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | AAAAACCTTAATACCAGCTTCCCAGCCACCTCTGCAGAAAAGCATGGCCACGTGCCAGGGACACGAAGGTaGGGGGTCTGGTGCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KNLNTSFPATSAEKHGHVPGTRR*GVWCGH Trigger: GTGGCCGCACCAGACCCCCCACCTTCGTGTCCCTGG...CACGTGGCCATGCTTTTCTGCAGAGGTGGCTGGGAAGCTGGTATTAAGGTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR GCA 90 bp | CCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGCCCATGGGAAAGGGAGCGACGACAGACATGACGTaGCAGGAGGAGGTGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PGNWIKYPRGREPMGKGATTDMT*QEEVKG Trigger: GCCCTTCACCTCCTCCTGGCACGTCATGTCTGTCGT...CGCTCCCTTTCCCATGGGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR GCA 90 bp | ATAACGGGATTCTCGTGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTATCTTTCTGGTAGCCTaGAGAAAAGCCTCGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ITGFSWLPPLLSVPSLGCIFLVA*RKASAG Trigger: GCCAGCCGAGGCTTTTCTGCAGGCTACCAGAAAGAT...ACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCACGAGAATCCCGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR GCA 90 bp | AAAAACCTTAATACCAGCTTCCCAGCCACCTCTGCAGAAAAGCATGGCCACGTGCTTCCCCAGCAGCTGTaGCTCCTCACTGGCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: KNLNTSFPATSAEKHGHVLPQQL*LLTGPI Trigger: GATGGGGCCAGTGAGGAGGCACAGCTGCTGGGGAAG...CACGTGGCCATGCTTTTCTGCAGAGGTGGCTGGGAAGCTGGTATTAAGGTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | CCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGCCCATGGGAAAGGGAGCGCAGAAAAGCCTCGGCTaGCCACGTGCTTGTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: PGNWIKYPRGREPMGKGAQKSLG*PRACLS Trigger: ACTCAGACAAGCACGTGGCCAGCCGAGGCTTTTCTG...CGCTCCCTTTCCCATGGGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| 3UTR CAA 72 bp | CACGTGACTGAAACCACAGGGACCCAGGACAAAGCATaGAGAGCGCTTTGGAAGGCTCGGGCTTTCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: HVTETTGTQDKA*RALWKARAFWI Trigger: TATCCAGAAAGCCCGAGCCTTCCAAAGCGCTCTCAATGCTTTGTCCTGGGTCCCTGTGGTTTCAGTCACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | GGCATATTGTGTGCATCAGTCCTGGAAACTGGATCAAATATCCAAGAGGCAGAGGGGGCTGTGTCTCAGTaGACACAGGAAGGGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GILCASVLETGSNIQEAEGAVSQ*TQEGAA Trigger: TGCGGCCCCTTCCTGTGTCCACTGAGACACAGCCCC...CTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAATATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR GCA 90 bp | TTGTGTGCATCAGTCCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGCCCACCTGGCCACAGAACCTaGCCAGCAGATTGCCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LCASVLETGSNIQEAESPPGHRT*PADCPC Trigger: ACAAGGGCAATCTGCTGGGCAGGTTCTGTGGCCAGG...TGGGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | CCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGCCCATGGGAAAGGGAGCGAAGCCACAGGTGTCATaGTATTCCAGGTCAAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: PGNWIKYPRGREPMGKGAKPQVS*YSRSKA Trigger: CGCCTTTGACCTGGAATACCATGACACCTGTGGCTT...CGCTCCCTTTCCCATGGGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | TTTTGCCTCCTGACTGTTGATAACTTGGCATATTGTGTGCATCAGTCCTGGAAAGGAGGTGAAGGGCGGTaGGGGCACCTGGCCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: FCLLTVDNLAYCVHQSWKGGEGR*GHLATE Trigger: TTCTGTGGCCAGGTGCCCCCACCGCCCTTCACCTCC...TTTCCAGGACTGATGCACACAATATGCCAAGTTATCAACAGTCAGGAGGCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | CATAAGGATCTCAGCGGTGCCCTTAGGAAATTCCGAGTCCCTGGCCCCATACAGGGCACTCCACATTGTTaGGGTAATTGTTGGGGTACT | + |
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Preference number: 4 (lower is better) Translates to: HKDLSGALRKFRVPGPIQGTPHC*GNCWGT Trigger: AGTACCCCAACAATTACCCCAACAATGTGGAGTGCC...CTGTATGGGGCCAGGGACTCGGAATTTCCTAAGGGCACCGCTGAGATCCTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | CCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGCCCATGGGAAAGGGAGCGTCAAAGGCTGCCAGATaGTCGAAGTCACAGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PGNWIKYPRGREPMGKGASKAAR*SKSQVL Trigger: CAGAACCTGTGACTTCGACCATCTGGCAGCCTTTGA...CGCTCCCTTTCCCATGGGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR GCA 90 bp | TATTGTGTGCATCAGTCCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGCCGACTTGAAGACCACCTaGAGCTCATGGCCCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: YCVHQSWKLDQISKRQRADLKTT*SSWPRD Trigger: GTCCCTGGGCCATGAGCTGCAGGTGGTCTTCAAGTC...GGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR TCA 90 bp | ATTGTGTGCATCAGTCCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGCCCGGCCACGTGCTTGTCTaGGTGAAAGACGACAGACAT | + |
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Preference number: 4 (lower is better) Translates to: IVCISPGNWIKYPRGREPGHVLV*VKDDRH Trigger: ATGTCTGTCGTCTTTCACTCAGACAAGCACGTGGCC...GGGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR TCA 90 bp | CATATTGTGTGCATCAGTCCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGAGAAGTAGTGGGCCTTaGAGCCCCGGCCTCCAATGT | + |
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Preference number: 4 (lower is better) Translates to: HIVCISPGNWIKYPRGRERSSGP*SPGLQC Trigger: ACATTGGAGGCCGGGGCTTCAAGGCCCACTACTTCT...CTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR TCA 90 bp | TATTGTGTGCATCAGTCCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGCCTTCCACGCACAGCTGTaGACACCTCCTGGCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: YCVHQSWKLDQISKRQRAFHAQL*TPPGIL Trigger: GAGAATGCCAGGAGGTGTTCACAGCTGTGCGTGGAA...GGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR GCA 90 bp | GCATATTGTGTGCATCAGTCCTGGAAACTGGATCAAATATCCAAGAGGCAGAGACCACGATCAGCCAGCTaGACTCCGTGTTGTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AYCVHQSWKLDQISKRQRPRSAS*TPCCRG Trigger: ACCCCTACAACACGGAGTGCAGCTGGCTGATCGTGG...TCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAATATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | AAAAACCTTAATACCAGCTTCCCAGCCACCTCTGCAGAAAAGCATGGCCACGTGGTAGGGGTACAGACTTaGGAAGTTTGGGCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNLNTSFPATSAEKHGHVVGVQT*EVWAGE Trigger: TTCTCCAGCCCAAACTTCCCAAGTCTGTACCCCTAC...CACGTGGCCATGCTTTTCTGCAGAGGTGGCTGGGAAGCTGGTATTAAGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGCATATTGTGTGCATCAGTCCTGGAAACTGGATCAAATATCCAAGAGGCTTGGGAAGTTTGGGCTaGAGAAGTTCCCAGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TWHIVCISPGNWIKYPRGLGSLG*RSSQMA Trigger: CGCCATCTGGGAACTTCTCCAGCCCAAACTTCCCAA...GCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAATATGCCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CCA 90 bp | TTTTGCCTCCTGACTGTTGATAACTTGGCATATTGTGTGCATCAGTCCTGGAAAAGGCGGATGGTCCAGTaGCAACGGATATTGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: FCLLTVDNLAYCVHQSWKRRMVQ*QRILLG Trigger: CCCCAACAATATCCGTTGCCACTGGACCATCCGCCT...TTTCCAGGACTGATGCACACAATATGCCAAGTTATCAACAGTCAGGAGGCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS GCA 90 bp | GCTGACCTCCGATGTAGGCCACGGAGAAGCCCCTGCCGGAGGTGCTaGGGTCAGTGTGCAGCAGGAGCAGGACCTGGTTGCGACTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ADLRCRPRRSPCRRC*GQCAAGAGPGCDSR Trigger: CCTCGAGTCGCAACCAGGTCCTGCTCCTGCTGCACACTGACCGCAGCACCTCCGGCAGGGGCTTCTCCGTGGCCTACATCGGAGGTCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS GCA 90 bp | CCAGCTGACCTCCGATGTAGGCCACGGAGAAGCCCCTGCCGGAGGTaGTGCGGTCAGTGTGCAGCAGGAGCAGGACCTGGTTGCGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: PADLRCRPRRSPCRR*CGQCAAGAGPGCDS Trigger: CGAGTCGCAACCAGGTCCTGCTCCTGCTGCACACTGACCGCAGCACCTCCGGCAGGGGCTTCTCCGTGGCCTACATCGGAGGTCAGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS GCA 90 bp | GCACCACTCCGATGTAGGCCACGGAGAAGCCCCTGCCGGAGGTGCTaGGGTCAGTGTGCAGCAGGAGCAGGACCTGGTTGCGACTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: APLRCRPRRSPCRRC*GQCAAGAGPGCDSR Trigger: CCTCGAGTCGCAACCAGGTCCTGCTCCTGCTGCACACTGACCGCAGCACCTCCGGCAGGGGCTTCTCCGTGGCCTACATCGGAGTGGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS GCA 90 bp | TGGGCACCACTCCGATGTAGGCCACGGAGAAGCCCCTGCCGGAGGTaGTGCGGTCAGTGTGCAGCAGGAGCAGGACCTGGTTGCGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: WAPLRCRPRRSPCRR*CGQCAAGAGPGCDS Trigger: CGAGTCGCAACCAGGTCCTGCTCCTGCTGCACACTGACCGCAGCACCTCCGGCAGGGGCTTCTCCGTGGCCTACATCGGAGTGGTGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS TCA 90 bp | TGCGGTCAGTGTGCAGCAGGAGCAGGACCTGGTTGCGACTCGAGGTaGCAGGCGGCGGCAGGTGATGCCCACACCACTTCCCCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CGQCAAGAGPGCDSR*QAAAGDAHTTSPAA Trigger: AGCTGCTGGGGAAGTGGTGTGGGCATCACCTGCCGCCGCCTGTCACCTCGAGTCGCAACCAGGTCCTGCTCCTGCTGCACACTGACCGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS GCA 90 bp | GACACACACCCAGCTGACCTCCGATGTAGGCCACGGAGAAGCCCCTaGCGGAGGTGCTGCGGTCAGTGTGCAGCAGGAGCAGGACCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DTHPADLRCRPRRSP*RRCCGQCAAGAGPG Trigger: ACCAGGTCCTGCTCCTGCTGCACACTGACCGCAGCACCTCCGGCAGGGGCTTCTCCGTGGCCTACATCGGAGGTCAGCTGGGTGTGTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS CCA 90 bp | GGCTGCACAGCTCCGGCTACCCAGGTAGACCTTGGTCCGCTCCAGTaGGGCCAGTGCCTGGGCAGAGATCAGGATCTGGAAGTCCGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GCTAPATQVDLGPLQ*GQCLGRDQDLEVRA Trigger: CGCACGGACTTCCAGATCCTGATCTCTGCCCAGGCACTGGCCCCACTGGAGCGGACCAAGGTCTACCTGGGTAGCCGGAGCTGTGCAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS GCA 90 bp | GACAGGCGGCGGCAGGTGATGCCCACACCACTTCCCCAGCAGCTGTaGCTCCTCACTGGCCCCATCAAAGGCTGCCAGATGGTCGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DRRRQVMPTPLPQQL*LLTGPIKGCQMVEV Trigger: GACTTCGACCATCTGGCAGCCTTTGATGGGGCCAGTGAGGAGGCACAGCTGCTGGGGAAGTGGTGTGGGCATCACCTGCCGCCGCCTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 90 bp | ACAGACATGACGTGCCAGGAGGAGGTGAAGGGCGGTGGGGGCACCTaGCCACAGAACCTGCCCAGCAGATTGCCCTTGTCTCCAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TDMTCQEEVKGGGGT*PQNLPSRLPLSPEA Trigger: GGCCTCTGGAGACAAGGGCAATCTGCTGGGCAGGTTCTGTGGCCAGGTGCCCCCACCGCCCTTCACCTCCTCCTGGCACGTCATGTCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 90 bp | CCTCTGCCTCATCTCCAGGTGGGGCCTCCTGTAGGTGCTCAGCAGTaGCAGCGTAGGGCCCAAGCAGATCAGACCCTGACAGCAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLPHLQVGPPVGAQQ*QRRAQADQTLTAGG Trigger: CCCACCTGCTGTCAGGGTCTGATCTGCTTGGGCCCTACGCTGCCACTGCTGAGCACCTACAGGAGGCCCCACCTGGAGATGAGGCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS GCA 90 bp | TCACATTCATGGGCACCACTCCGATGTAGGCCACGGAGAAGCCCCTaGCGGAGGTGCTGCGGTCAGTGTGCAGCAGGAGCAGGACCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHSWAPLRCRPRRSP*RRCCGQCAAGAGPG Trigger: ACCAGGTCCTGCTCCTGCTGCACACTGACCGCAGCACCTCCGGCAGGGGCTTCTCCGTGGCCTACATCGGAGTGGTGCCCATGAATGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS GCA 90 bp | GCTCCGGCTACCCAGGTAGACCTTGGTCCGCTCCAGTGGGGCCAGTaGCTGGGCAGAGATCAGGATCTGGAAGTCCGTGCGAGAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: APATQVDLGPLQWGQ*LGRDQDLEVRARTA Trigger: AGCTGTTCTCGCACGGACTTCCAGATCCTGATCTCTGCCCAGGCACTGGCCCCACTGGAGCGGACCAAGGTCTACCTGGGTAGCCGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS CCA 90 bp | TGCCAACTTCCTGGGCTGCACAGCTCCGGCTACCCAGGTAGACCTTaGTCCGCTCCAGTGGGGCCAGTGCCTGGGCAGAGATCAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: CQLPGLHSSGYPGRP*SAPVGPVPGQRSGS Trigger: AGATCCTGATCTCTGCCCAGGCACTGGCCCCACTGGAGCGGACCAAGGTCTACCTGGGTAGCCGGAGCTGTGCAGCCCAGGAAGTTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS CCA 90 bp | GTGAAAGACGACAGACATGACGTGCCAGGAGGAGGTGAAGGGCGGTaGGGGCACCTGGCCACAGAACCTGCCCAGCAGATTGCCCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: VKDDRHDVPGGGEGR*GHLATEPAQQIALV Trigger: GACAAGGGCAATCTGCTGGGCAGGTTCTGTGGCCAGGTGCCCCCACCGCCCTTCACCTCCTCCTGGCACGTCATGTCTGTCGTCTTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS-3UTR CAA 90 bp | TGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTGCTCAACCTGCCCAGCAGATaGCCCTTGTCTCCAGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: CHLSCPFPALAVDRMPVLNLPSR*PLSPEA Trigger: GGCCTCTGGAGACAAGGGCAATCTGCTGGGCAGGTT...GAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS GCA 90 bp | GCCCAAGCAGATCAGACCCTGACAGCAGGTGGGCAGATGCTTCCTTaGGCCGCGGCTCACAGCGCACCTCATACTCGTGGATGTCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: AQADQTLTAGGQMLP*AAAHSAPHTRGCHR Trigger: ACGATGACATCCACGAGTATGAGGTGCGCTGTGAGCCGCGGCGCAAGGAAGCATCTGCCCACCTGCTGTCAGGGTCTGATCTGCTTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS CCA 90 bp | GCAGGTGATGCCCACACCACTTCCCCAGCAGCTGTGCCTCCTCACTaGCCCCATCAAAGGCTGCCAGATGGTCGAAGTCACAGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGDAHTTSPAAVPPH*PHQRLPDGRSHRFW Trigger: CCAGAACCTGTGACTTCGACCATCTGGCAGCCTTTGATGGGGCCAGTGAGGAGGCACAGCTGCTGGGGAAGTGGTGTGGGCATCACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 90 bp | TTGGTCCGCTCCAGTGGGGCCAGTGCCTGGGCAGAGATCAGGATCTaGAAGTCCGTGCGAGAACAGCTCACATTCATGGGCACCACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LVRSSGASAWAEIRI*KSVREQLTFMGTTP Trigger: CGGAGTGGTGCCCATGAATGTGAGCTGTTCTCGCACGGACTTCCAGATCCTGATCTCTGCCCAGGCACTGGCCCCACTGGAGCGGACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGCCACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTAGCACACCCCCACACTaGACACCTTCCATGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: WLPPLLSVPSLGCGQDARSTPPH*TPSMAW Trigger: CCAAGCCATGGAAGGTGTCAAGTGTGGGGGTGTGCT...ACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTGGCAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS TCA 90 bp | TGCATTCGTCGCTGCCCTCAACCTGGAAGTCCACGAACACCAACTTaGCAGCAGCAGGTCCTGAGGCGCGGATCAGCCAGTGGCACTCCA | + |
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Preference number: 5 (lower is better) Translates to: CIRRCPQPGSPRTPT*QQQVLRRGSASGTP Trigger: TGGAGTGCCACTGGCTGATCCGCGCCTCAGGACCTGCTGCTGTCAAGTTGGTGTTCGTGGACTTCCAGGTTGAGGGCAGCGACGAATGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS GCA 90 bp | ACTCAGTACCGCAGGTGTCAAAGCGGGCCTGGATCCGGAAGTTACTaGCAACTTCCTGGGCTGCACAGCTCCGGCTACCCAGGTAGACCT | + |
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Preference number: 5 (lower is better) Translates to: TQYRRCQSGPGSGSY*QLPGLHSSGYPGRP Trigger: AGGTCTACCTGGGTAGCCGGAGCTGTGCAGCCCAGGAAGTTGGCAGTAACTTCCGGATCCAGGCCCGCTTTGACACCTGCGGTACTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS-3UTR CAA 90 bp | CACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTGCTCTGCTCCACGAACACCAACTaGACAGCAGCAGGTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: HLSCPFPALAVDRMPVLCSTNTN*TAAGPE Trigger: CTCAGGACCTGCTGCTGTCAAGTTGGTGTTCGTGGA...GCAGAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS-3UTR CAA 90 bp | CACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTGCTCTGCCCCCGGCCTCCAATGTaGAAGTCAGACTTGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: HLSCPFPALAVDRMPVLCPRPPM*KSDLKT Trigger: GGTCTTCAAGTCTGACTTCAACATTGGAGGCCGGGG...GCAGAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS TCA 90 bp | GGCTGGAGAAGTTCCCAGATGGCGCTGAGAGCACACCCCCACACTTaGCACCTTCCATGGCTTGGGTCCCAGGATCGGAGTCCAACAGTA | + |
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Preference number: 5 (lower is better) Translates to: GWRSSQMALRAHPHT*HLPWLGSQDRSPTV Trigger: TACTGTTGGACTCCGATCCTGGGACCCAAGCCATGGAAGGTGTCAAGTGTGGGGGTGTGCTCTCAGCGCCATCTGGGAACTTCTCCAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS GCA 90 bp | CGTGGGCAGGGCCAGGCGCTCCAAGCACAGCTACGTAGTCATACATaGATTCGTCGCTGCCCTCAACCTGGAAGTCCACGAACACCAACT | + |
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Preference number: 5 (lower is better) Translates to: RGQGQALQAQLRSHT*IRRCPQPGSPRTPT Trigger: AGTTGGTGTTCGTGGACTTCCAGGTTGAGGGCAGCGACGAATGCATGTATGACTACGTAGCTGTGCTTGGAGCGCCTGGCCCTGCCCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS GCA 90 bp | TTGCGCCGCGGCTCACAGCGCACCTCATACTCGTGGATGTCATCGTaGCCAGCAGTGGAGAAGTCGATGTACAACACGCTGACGATCACG | + |
|
Preference number: 5 (lower is better) Translates to: LRRGSQRTSYSWMSS*PAVEKSMYNTLTIT Trigger: CGTGATCGTCAGCGTGTTGTACATCGACTTCTCCACTGCTGGGCACGATGACATCCACGAGTATGAGGTGCGCTGTGAGCCGCGGCGCAA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS CCA 90 bp | GGTCCAGTGGCAACGGATATTGTTGGGGTAGGCGCCAGGGTACTGTaGGCTGGAGAAGTTTCCACGCACAGCTGTGAACACCTCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPVATDIVGVGARVL*AGEVSTHSCEHLLA Trigger: TGCCAGGAGGTGTTCACAGCTGTGCGTGGAAACTTCTCCAGCCCACAGTACCCTGGCGCCTACCCCAACAATATCCGTTGCCACTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 90 bp | CCCAGCAGCTGTGCCTCCTCACTGGCCCCATCAAAGGCTGCCAGATaGTCGAAGTCACAGGTTCTGGTTAGGCTATTGGGCTCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSSCASSLAPSKAAR*SKSQVLVRLLGSSK Trigger: CTTGGAGGAGCCCAATAGCCTAACCAGAACCTGTGACTTCGACCATCTGGCAGCCTTTGATGGGGCCAGTGAGGAGGCACAGCTGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 90 bp | GCAGATGCTTCCTTGCGCCGCGGCTCACAGCGCACCTCATACTCGTaGATGTCATCGTGCCCAGCAGTGGAGAAGTCGATGTACAACACG | + |
|
Preference number: 5 (lower is better) Translates to: ADASLRRGSQRTSYS*MSSCPAVEKSMYNT Trigger: CGTGTTGTACATCGACTTCTCCACTGCTGGGCACGATGACATCCACGAGTATGAGGTGCGCTGTGAGCCGCGGCGCAAGGAAGCATCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS-3UTR CAA 90 bp | CGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTGCTCTGCAGAAGTTCTGTTGGTTCTGGTTAGGCTATaGGGCTCCTCCAAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSQPWLWTGCPCSAEVLLVLVRL*GSSKPR Trigger: CCTGGGCTTGGAGGAGCCCAATAGCCTAACCAGAAC...CAACAGAACTTCTGCAGAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS CCA 90 bp | AGGAAGTCAAAGCCACAGGTGTCATGGTATTCCAGGTCAAAGGCGTaGAAGGTGAGCAGCACAGAGGAGCCCTCGGCCACCACGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKSKPQVSWYSRSKA*KVSSTEEPSATTIS Trigger: GCTGATCGTGGTGGCCGAGGGCTCCTCTGTGCTGCTCACCTTCCACGCCTTTGACCTGGAATACCATGACACCTGTGGCTTTGACTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS-3UTR CAA 90 bp | GTTGCAAACATAAGGATCTCAGCGGTGCCCTTAGGAAATTCCGAGTCCCTGGCCCCCAGCAGATTGCCCTaGTCTCCAGAGGCCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VANIRISAVPLGNSESLAPSRLP*SPEAPL Trigger: CAACGGGGCCTCTGGAGACAAGGGCAATCTGCTGGG...GGCCAGGGACTCGGAATTTCCTAAGGGCACCGCTGAGATCCTTATGTTTGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS TCA 90 bp | TTTCTGGTAGCCTGCAGAAAAGCCTCGGCTGGCCACGTGCTTGTCTaGGTGAAAGACGACAGACATGACGTGCCAGGAGGAGGTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLVACRKASAGHVLV*VKDDRHDVPGGGEG Trigger: CCCTTCACCTCCTCCTGGCACGTCATGTCTGTCGTCTTTCACTCAGACAAGCACGTGGCCAGCCGAGGCTTTTCTGCAGGCTACCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS-3UTR CAA 90 bp | CACCTCTCTTGTCCGTTCCCAGCCTTGGCTGTGGACAGGATGCCCGTGCTCTGCATGTTGAAGTCAGACTaGAAGACCACCTGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLSCPFPALAVDRMPVLCMLKSD*KTTCSS Trigger: TGAGCTGCAGGTGGTCTTCAAGTCTGACTTCAACAT...GCAGAGCACGGGCATCCTGTCCACAGCCAAGGCTGGGAACGGACAAGAGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS TCA 90 bp | CTCAACCTGGAAGTCCACGAACACCAACTTGACAGCAGCAGGTCCTaGGGCGCGGATCAGCCAGTGGCACTCCACATTGTTGGGGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: LNLEVHEHQLDSSRS*GADQPVALHIVGVI Trigger: AATTACCCCAACAATGTGGAGTGCCACTGGCTGATCCGCGCCTCAGGACCTGCTGCTGTCAAGTTGGTGTTCGTGGACTTCCAGGTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS-3UTR CAA 90 bp | ACCACAGGGACCCAGGACAAAGCATTGAGAGCGCTTTGGAAGGCTCGGGCTTTCACAGACTTGGGAAGTTaGGGCTGGAGAAGTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TTGTQDKALRALWKARAFTDLGS*GWRSSQ Trigger: CTGGGAACTTCTCCAGCCCAAACTTCCCAAGTCTGT...GAAAGCCCGAGCCTTCCAAAGCGCTCTCAATGCTTTGTCCTGGGTCCCTGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS TCA 90 bp | TCGATGTACAACACGCTGACGATCACGGACGTGTTATTTCTTCTCTaGGACTCAGTACCGCAGGTGTCAAAGCGGGCCTGGATCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMYNTLTITDVLFLL*DSVPQVSKRAWIRK Trigger: CTTCCGGATCCAGGCCCGCTTTGACACCTGCGGTACTGAGTCTCAGAGAAGAAATAACACGTCCGTGATCGTCAGCGTGTTGTACATCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS TCA 90 bp | GGATGTCATCGTGCCCAGCAGTGGAGAAGTCGATGTACAACACGCTaGCGATCACGGACGTGTTATTTCTTCTCTGAGACTCAGTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: GCHRAQQWRSRCTTR*RSRTCYFFSETQYR Trigger: GCGGTACTGAGTCTCAGAGAAGAAATAACACGTCCGTGATCGTCAGCGTGTTGTACATCGACTTCTCCACTGCTGGGCACGATGACATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS-3UTR CAA 90 bp | TATTGTGTGCATCAGTCCTGGAAACTGGATCAAATATCCAAGAGGCAGAGAGCCGACACCTTCCATGGCTaGGGTCCCAGGATCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: YCVHQSWKLDQISKRQRADTFHG*GPRIGV Trigger: GACTCCGATCCTGGGACCCAAGCCATGGAAGGTGTC...GGCTCTCTGCCTCTTGGATATTTGATCCAGTTTCCAGGACTGATGCACACAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS CCA 72 bp | CCTGGGCTGCACAGCTCCGGCTACCCAGGTAGACCTTaGTCCGCTCCAGTGGGGCCAGTGCCTGGGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGLHSSGYPGRP*SAPVGPVPGQR Trigger: TCTCTGCCCAGGCACTGGCCCCACTGGAGCGGACCAAGGTCTACCTGGGTAGCCGGAGCTGTGCAGCCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS TCA 72 bp | ACCTGGTTGCGACTCGAGGTGACAGGCGGCGGCAGGTaGTGCCCACACCACTTCCCCAGCAGCTGTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TWLRLEVTGGGR*CPHHFPSSCAS Trigger: GGAGGCACAGCTGCTGGGGAAGTGGTGTGGGCATCACCTGCCGCCGCCTGTCACCTCGAGTCGCAACCAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS GCA 72 bp | CTCCGATGTAGGCCACGGAGAAGCCCCTGCCGGAGGTaGTGCGGTCAGTGTGCAGCAGGAGCAGGACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LRCRPRRSPCRR*CGQCAAGAGPG Trigger: ACCAGGTCCTGCTCCTGCTGCACACTGACCGCAGCACCTCCGGCAGGGGCTTCTCCGTGGCCTACATCGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS GCA 72 bp | CCAGCTGACCTCCGATGTAGGCCACGGAGAAGCCCCTaGCGGAGGTGCTGCGGTCAGTGTGCAGCAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: PADLRCRPRRSP*RRCCGQCAAGA Trigger: TGCTCCTGCTGCACACTGACCGCAGCACCTCCGGCAGGGGCTTCTCCGTGGCCTACATCGGAGGTCAGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062495.3 |
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| CDS GCA 72 bp | TGGGCACCACTCCGATGTAGGCCACGGAGAAGCCCCTaGCGGAGGTGCTGCGGTCAGTGTGCAGCAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: WAPLRCRPRRSP*RRCCGQCAAGA Trigger: TGCTCCTGCTGCACACTGACCGCAGCACCTCCGGCAGGGGCTTCTCCGTGGCCTACATCGGAGTGGTGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS TCA 72 bp | AGCAGTGGCAGCGTAGGGCCCAAGCAGATCAGACCCTaGCAGCAGGTGGGCAGATGCTTCCTTGCGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: SSGSVGPKQIRP*QQVGRCFLAPR Trigger: CCGCGGCGCAAGGAAGCATCTGCCCACCTGCTGTCAGGGTCTGATCTGCTTGGGCCCTACGCTGCCACTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS GCA 72 bp | CGGCAGGTGATGCCCACACCACTTCCCCAGCAGCTGTaGCTCCTCACTGGCCCCATCAAAGGCTGCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: RQVMPTPLPQQL*LLTGPIKGCQM Trigger: CATCTGGCAGCCTTTGATGGGGCCAGTGAGGAGGCACAGCTGCTGGGGAAGTGGTGTGGGCATCACCTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS GCA 72 bp | ACCCAGGTAGACCTTGGTCCGCTCCAGTGGGGCCAGTaGCTGGGCAGAGATCAGGATCTGGAAGTCCGTGCG | + |
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Preference number: 6 (lower is better) Translates to: TQVDLGPLQWGQ*LGRDQDLEVRA Trigger: CGCACGGACTTCCAGATCCTGATCTCTGCCCAGGCACTGGCCCCACTGGAGCGGACCAAGGTCTACCTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS CCA 72 bp | GACAGACATGACGTGCCAGGAGGAGGTGAAGGGCGGTaGGGGCACCTGGCCACAGAACCTGCCCAGCAGATT | + |
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Preference number: 6 (lower is better) Translates to: DRHDVPGGGEGR*GHLATEPAQQI Trigger: AATCTGCTGGGCAGGTTCTGTGGCCAGGTGCCCCCACCGCCCTTCACCTCCTCCTGGCACGTCATGTCTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 72 bp | GCTCCGGCTACCCAGGTAGACCTTGGTCCGCTCCAGTaGGGCCAGTGCCTGGGCAGAGATCAGGATCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: APATQVDLGPLQ*GQCLGRDQDLE Trigger: TTCCAGATCCTGATCTCTGCCCAGGCACTGGCCCCACTGGAGCGGACCAAGGTCTACCTGGGTAGCCGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS CAA 90 bp | GGCCCAAGCAGATCAGACCCTGACAGCAGGTGGGCAGATGCTTCCTaGCGCCGCGGCTCACAGCGCACCTCATACTCGTGGATGTCATCG | + |
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Preference number: 6 (lower is better) Translates to: GPSRSDPDSRWADAS*RRGSQRTSYSWMSS Trigger: CGATGACATCCACGAGTATGAGGTGCGCTGTGAGCCGCGGCGCAAGGAAGCATCTGCCCACCTGCTGTCAGGGTCTGATCTGCTTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS GCA 72 bp | GATCAGACCCTGACAGCAGGTGGGCAGATGCTTCCTTaGGCCGCGGCTCACAGCGCACCTCATACTCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: DQTLTAGGQMLP*AAAHSAPHTRG Trigger: TCCACGAGTATGAGGTGCGCTGTGAGCCGCGGCGCAAGGAAGCATCTGCCCACCTGCTGTCAGGGTCTGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS CCA 72 bp | CATCTCCAGGTGGGGCCTCCTGTAGGTGCTCAGCAGTaGCAGCGTAGGGCCCAAGCAGATCAGACCCTGACA | + |
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Preference number: 6 (lower is better) Translates to: HLQVGPPVGAQQ*QRRAQADQTLT Trigger: TGTCAGGGTCTGATCTGCTTGGGCCCTACGCTGCCACTGCTGAGCACCTACAGGAGGCCCCACCTGGAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS CAA 72 bp | AGATCAGACCCTGACAGCAGGTGGGCAGATGCTTCCTaGCGCCGCGGCTCACAGCGCACCTCATACTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: RSDPDSRWADAS*RRGSQRTSYSW Trigger: CCACGAGTATGAGGTGCGCTGTGAGCCGCGGCGCAAGGAAGCATCTGCCCACCTGCTGTCAGGGTCTGATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS TCA 72 bp | CGCTGCCCTCAACCTGGAAGTCCACGAACACCAACTTaGCAGCAGCAGGTCCTGAGGCGCGGATCAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: RCPQPGSPRTPT*QQQVLRRGSAS Trigger: ACTGGCTGATCCGCGCCTCAGGACCTGCTGCTGTCAAGTTGGTGTTCGTGGACTTCCAGGTTGAGGGCAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS GCA 72 bp | GCACAGAGGAGCCCTCGGCCACCACGATCAGCCAGCTaGACTCCGTGTTGTAGGGGTACAGACTTGGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: AQRSPRPPRSAS*TPCCRGTDLGS Trigger: ACTTCCCAAGTCTGTACCCCTACAACACGGAGTGCAGCTGGCTGATCGTGGTGGCCGAGGGCTCCTCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 72 bp | TCCTTGCGCCGCGGCTCACAGCGCACCTCATACTCGTaGATGTCATCGTGCCCAGCAGTGGAGAAGTCGATG | + |
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Preference number: 6 (lower is better) Translates to: SLRRGSQRTSYS*MSSCPAVEKSM Trigger: CATCGACTTCTCCACTGCTGGGCACGATGACATCCACGAGTATGAGGTGCGCTGTGAGCCGCGGCGCAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS TCA 72 bp | AGTTCCCAGATGGCGCTGAGAGCACACCCCCACACTTaGCACCTTCCATGGCTTGGGTCCCAGGATCGGAGT | + |
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Preference number: 6 (lower is better) Translates to: SSQMALRAHPHT*HLPWLGSQDRS Trigger: ACTCCGATCCTGGGACCCAAGCCATGGAAGGTGTCAAGTGTGGGGGTGTGCTCTCAGCGCCATCTGGGAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 72 bp | AAGCCACAGGTGTCATGGTATTCCAGGTCAAAGGCGTaGAAGGTGAGCAGCACAGAGGAGCCCTCGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: KPQVSWYSRSKA*KVSSTEEPSAT Trigger: GGTGGCCGAGGGCTCCTCTGTGCTGCTCACCTTCCACGCCTTTGACCTGGAATACCATGACACCTGTGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 72 bp | TCCAGTGGGGCCAGTGCCTGGGCAGAGATCAGGATCTaGAAGTCCGTGCGAGAACAGCTCACATTCATGGGC | + |
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Preference number: 6 (lower is better) Translates to: SSGASAWAEIRI*KSVREQLTFMG Trigger: GCCCATGAATGTGAGCTGTTCTCGCACGGACTTCCAGATCCTGATCTCTGCCCAGGCACTGGCCCCACTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS TCA 72 bp | TCCACGCACAGCTGTGAACACCTCCTGGCATTCTCCTaGGAAGTAGTGGGCCTTGAAGCCCCGGCCTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: STHSCEHLLAFS*EVVGLEAPASN Trigger: ATTGGAGGCCGGGGCTTCAAGGCCCACTACTTCTCAGGAGAATGCCAGGAGGTGTTCACAGCTGTGCGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS GCA 72 bp | GGCCAGGCGCTCCAAGCACAGCTACGTAGTCATACATaGATTCGTCGCTGCCCTCAACCTGGAAGTCCACGA | + |
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Preference number: 6 (lower is better) Translates to: GQALQAQLRSHT*IRRCPQPGSPR Trigger: TCGTGGACTTCCAGGTTGAGGGCAGCGACGAATGCATGTATGACTACGTAGCTGTGCTTGGAGCGCCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 72 bp | CCGTGTTGTAGGGGTACAGACTTGGGAAGTTTGGGCTaGAGAAGTTCCCAGATGGCGCTGAGAGCACACCCC | + |
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Preference number: 6 (lower is better) Translates to: PCCRGTDLGSLG*RSSQMALRAHP Trigger: GGGGTGTGCTCTCAGCGCCATCTGGGAACTTCTCCAGCCCAAACTTCCCAAGTCTGTACCCCTACAACACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 72 bp | CAGCCAGCTGCACTCCGTGTTGTAGGGGTACAGACTTaGGAAGTTTGGGCTGGAGAAGTTCCCAGATGGCGC | + |
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Preference number: 6 (lower is better) Translates to: QPAALRVVGVQT*EVWAGEVPRWR Trigger: GCGCCATCTGGGAACTTCTCCAGCCCAAACTTCCCAAGTCTGTACCCCTACAACACGGAGTGCAGCTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CAA 90 bp | TCAAAGGCTGCCAGATGGTCGAAGTCACAGGTTCTGGTTAGGCTATaGGGCTCCTCCAAGCCCAGGTCCAGGATGAAGACCTTGACCCGG | + |
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Preference number: 6 (lower is better) Translates to: SKAARWSKSQVLVRL*GSSKPRSRMKTLTR Trigger: CCGGGTCAAGGTCTTCATCCTGGACCTGGGCTTGGAGGAGCCCAATAGCCTAACCAGAACCTGTGACTTCGACCATCTGGCAGCCTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS TCA 72 bp | GTAATTGTTGGGGTACTCAGGGCTGCTGAGAACCCCTaGCAGGCCGGTCAAGACACCGCCGCACACATCTTT | + |
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Preference number: 6 (lower is better) Translates to: VIVGVLRAAENP*QAGQDTAAHIF Trigger: AAAGATGTGTGCGGCGGTGTCTTGACCGGCCTGTCAGGGGTTCTCAGCAGCCCTGAGTACCCCAACAATTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS TCA 72 bp | GAAGTCCACGAACACCAACTTGACAGCAGCAGGTCCTaGGGCGCGGATCAGCCAGTGGCACTCCACATTGTT | + |
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Preference number: 6 (lower is better) Translates to: EVHEHQLDSSRS*GADQPVALHIV Trigger: AACAATGTGGAGTGCCACTGGCTGATCCGCGCCTCAGGACCTGCTGCTGTCAAGTTGGTGTTCGTGGACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS GCA 72 bp | GGCTCACAGCGCACCTCATACTCGTGGATGTCATCGTaGCCAGCAGTGGAGAAGTCGATGTACAACACGCTG | + |
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Preference number: 6 (lower is better) Translates to: GSQRTSYSWMSS*PAVEKSMYNTL Trigger: CAGCGTGTTGTACATCGACTTCTCCACTGCTGGGCACGATGACATCCACGAGTATGAGGTGCGCTGTGAGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS CCA 72 bp | GCAACGGATATTGTTGGGGTAGGCGCCAGGGTACTGTaGGCTGGAGAAGTTTCCACGCACAGCTGTGAACAC | + |
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Preference number: 6 (lower is better) Translates to: ATDIVGVGARVL*AGEVSTHSCEH Trigger: GTGTTCACAGCTGTGCGTGGAAACTTCTCCAGCCCACAGTACCCTGGCGCCTACCCCAACAATATCCGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 72 bp | TGTGCCTCCTCACTGGCCCCATCAAAGGCTGCCAGATaGTCGAAGTCACAGGTTCTGGTTAGGCTATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: CASSLAPSKAAR*SKSQVLVRLLG Trigger: GCCCAATAGCCTAACCAGAACCTGTGACTTCGACCATCTGGCAGCCTTTGATGGGGCCAGTGAGGAGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS TCA 72 bp | GGTACTGTGGGCTGGAGAAGTTTCCACGCACAGCTGTaGACACCTCCTGGCATTCTCCTGAGAAGTAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GTVGWRSFHAQL*TPPGILLRSSG Trigger: CCCACTACTTCTCAGGAGAATGCCAGGAGGTGTTCACAGCTGTGCGTGGAAACTTCTCCAGCCCACAGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS CCA 72 bp | CATCAAAGGCTGCCAGATGGTCGAAGTCACAGGTTCTaGTTAGGCTATTGGGCTCCTCCAAGCCCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: HQRLPDGRSHRF*LGYWAPPSPGP Trigger: TGGACCTGGGCTTGGAGGAGCCCAATAGCCTAACCAGAACCTGTGACTTCGACCATCTGGCAGCCTTTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062495.3 ENSMUST00000221740.2 |
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| CDS TCA 72 bp | AACACGCTGACGATCACGGACGTGTTATTTCTTCTCTaGGACTCAGTACCGCAGGTGTCAAAGCGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: NTLTITDVLFLL*DSVPQVSKRAW Trigger: CCAGGCCCGCTTTGACACCTGCGGTACTGAGTCTCAGAGAAGAAATAACACGTCCGTGATCGTCAGCGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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| CDS TCA 72 bp | CGTGCCCAGCAGTGGAGAAGTCGATGTACAACACGCTaGCGATCACGGACGTGTTATTTCTTCTCTGAGACT | + |
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Preference number: 6 (lower is better) Translates to: RAQQWRSRCTTR*RSRTCYFFSET Trigger: AGTCTCAGAGAAGAAATAACACGTCCGTGATCGTCAGCGTGTTGTACATCGACTTCTCCACTGCTGGGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221740.2 |
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