Pregenerated sensors for CDCP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035498Ensembl transcript IDs: ENSMUST00000039229.8
Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAGCATGGTGATTTCAGGTGAAGCAAGGAGCCACAGCTGTCCCTaGCCCTACCCTCACAGAGGGCCATCAGCACCTTGGGTAGCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: LSMVISGEARSHSCP*PYPHRGPSAPWVAG Trigger: CCCAGCTACCCAAGGTGCTGATGGCCCTCTGTGAGGGTAGGGTCAGGGACAGCTGTGGCTCCTTGCTTCACCTGAAATCACCATGCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 90 bp | CATCGGGAATCCAGAACTCCAGGGCTCATTGTAGTCTTGTCTGGGTaGACCGTGTCTCTCTTCTGTCCCTGTGGCCAGCCTCAACACAAC | + |
|
Preference number: 1 (lower is better) Translates to: HRESRTPGLIVVLSG*TVSLFCPCGQPQHN Trigger: GTTGTGTTGAGGCTGGCCACAGGGACAGAAGAGAGACACGGTCCACCCAGACAAGACTACAATGAGCCCTGGAGTTCTGGATTCCCGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 90 bp | TCGTCATCGGGAATCCAGAACTCCAGGGCTCATTGTAGTCTTGTCTaGGTGGACCGTGTCTCTCTTCTGTCCCTGTGGCCAGCCTCAACA | + |
|
Preference number: 1 (lower is better) Translates to: SSSGIQNSRAHCSLV*VDRVSLLSLWPAST Trigger: TGTTGAGGCTGGCCACAGGGACAGAAGAGAGACACGGTCCACCCAGACAAGACTACAATGAGCCCTGGAGTTCTGGATTCCCGATGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 90 bp | CCTGCCTGCTTTTATGCAGGATGGAGCCCAGAGCTTTGCACACGTTaGGCAAGCATTCTACCAACTTGGCTACACCCTCAGCTCCACATC | + |
|
Preference number: 1 (lower is better) Translates to: PACFYAGWSPELCTR*ASILPTWLHPQLHI Trigger: GATGTGGAGCTGAGGGTGTAGCCAAGTTGGTAGAATGCTTGCCCAACGTGTGCAAAGCTCTGGGCTCCATCCTGCATAAAAGCAGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 90 bp | CCCGAGACTACAGGTGTGCACCATCCTGCCTGCTTTTATGCAGGATaGAGCCCAGAGCTTTGCACACGTTGGGCAAGCATTCTACCAACT | + |
|
Preference number: 1 (lower is better) Translates to: PETTGVHHPACFYAG*SPELCTRWASILPT Trigger: AGTTGGTAGAATGCTTGCCCAACGTGTGCAAAGCTCTGGGCTCCATCCTGCATAAAAGCAGGCAGGATGGTGCACACCTGTAGTCTCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 90 bp | CTGTCCCTGTGGCCAGCCTCAACACAACCCGAGTTCAGGAAGGCCTaGGCTTTAGGATGGCATCCTCATAGAAGTCATGATTTGCCCATC | + |
|
Preference number: 1 (lower is better) Translates to: LSLWPASTQPEFRKA*ALGWHPHRSHDLPI Trigger: GATGGGCAAATCATGACTTCTATGAGGATGCCATCCTAAAGCTCAGGCCTTCCTGAACTCGGGTTGTGTTGAGGCTGGCCACAGGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 90 bp | GGATGGGTTACCCTGGATGTCCTATCTGAGGGCCAGAGCTACCCATaGCTCACTTTAGCTGGGCATCTCTGGTCAAGGATATGCATCCAG | + |
|
Preference number: 1 (lower is better) Translates to: GWVTLDVLSEGQSYP*LTLAGHLWSRICIQ Trigger: CTGGATGCATATCCTTGACCAGAGATGCCCAGCTAAAGTGAGTCATGGGTAGCTCTGGCCCTCAGATAGGACATCCAGGGTAACCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR GCA 90 bp | CCAGCCATACCAAGACAGACTTGCCCAGCCATGGATGCTTCTAGATaGTGGGAAGGGCAAGGAAATCCTGAGAGCTTTGGAAGCACAGCT | + |
|
Preference number: 1 (lower is better) Translates to: PAIPRQTCPAMDASR*WEGQGNPESFGSTA Trigger: AGCTGTGCTTCCAAAGCTCTCAGGATTTCCTTGCCCTTCCCAGCATCTAGAAGCATCCATGGCTGGGCAAGTCTGTCTTGGTATGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 90 bp | GCCATACCAAGACAGACTTGCCCAGCCATGGATGCTTCTAGATGCTaGGAAGGGCAAGGAAATCCTGAGAGCTTTGGAAGCACAGCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: AIPRQTCPAMDASRC*EGQGNPESFGSTAE Trigger: TTCAGCTGTGCTTCCAAAGCTCTCAGGATTTCCTTGCCCTTCCCAGCATCTAGAAGCATCCATGGCTGGGCAAGTCTGTCTTGGTATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 90 bp | CACAGACCAGGGGGCCTTCAATTCACTGCATACTTGATGGTGACTTaGAATTCTGATCTTCCCGAGACTACAGGTGTGCACCATCCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: HRPGGLQFTAYLMVT*NSDLPETTGVHHPA Trigger: GGCAGGATGGTGCACACCTGTAGTCTCGGGAAGATCAGAATTTCAAGTCACCATCAAGTATGCAGTGAATTGAAGGCCCCCTGGTCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 90 bp | AGTTCAATCAGTGACCAGCCATACCAAGACAGACTTGCCCAGCCATaGATGCTTCTAGATGCTGGGAAGGGCAAGGAAATCCTGAGAGCT | + |
|
Preference number: 1 (lower is better) Translates to: SSISDQPYQDRLAQP*MLLDAGKGKEILRA Trigger: AGCTCTCAGGATTTCCTTGCCCTTCCCAGCATCTAGAAGCATCCATGGCTGGGCAAGTCTGTCTTGGTATGGCTGGTCACTGATTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 90 bp | CAGACTGGTCCTCCAACCTGTACTGAGGTTACAGCTGTTGGACTTTaGCTTGTCCCCATGGAAGAGTCAACCTCTTCCTTCTGTACACAG | + |
|
Preference number: 1 (lower is better) Translates to: QTGPPTCTEVTAVGL*LVPMEESTSSFCTQ Trigger: CTGTGTACAGAAGGAAGAGGTTGACTCTTCCATGGGGACAAGCCAAAGTCCAACAGCTGTAACCTCAGTACAGGTTGGAGGACCAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 90 bp | AACAATGTTCTCTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTaGATGCTGTGCCTGAAACACAGTAAAGGGACTTTTCCTGAGTGG | + |
|
Preference number: 1 (lower is better) Translates to: NNVLLPSEMLTPSSQ*MLCLKHSKGTFPEW Trigger: CCACTCAGGAAAAGTCCCTTTACTGTGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAGAGAACATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 90 bp | CACACGTATTTCCTAGAGAAGGTTTACCAGAGTCCTGAACTACTGTaGCTTTCCCTCTACATCATGGCAGGAGGAACTTTCGCAGTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: HTYFLEKVYQSPELL*LSLYIMAGGTFAVS Trigger: GGAGACTGCGAAAGTTCCTCCTGCCATGATGTAGAGGGAAAGCCACAGTAGTTCAGGACTCTGGTAAACCTTCTCTAGGAAATACGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 90 bp | ACCTTGCAAAAGCTACTCTTCCTTCTAGCTGATTGGGCTTCCCTCTaGCTTCTTGATGGGACAGTTCTTCATGTCTCAATGTCTGGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: TLQKLLFLLADWASL*LLDGTVLHVSMSGA Trigger: GGCACCAGACATTGAGACATGAAGAACTGTCCCATCAAGAAGTCAGAGGGAAGCCCAATCAGCTAGAAGGAAGAGTAGCTTTTGCAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR GCA 90 bp | ATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTaGTGCAGTGATGGCATGAAATTGATACAGATGGCCACTGTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: ISRTVLIQFSIHQRM*CSDGMKLIQMATVW Trigger: CCAGACAGTGGCCATCTGTATCAATTTCATGCCATCACTGCAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 90 bp | AACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGCAGTaGTGGCATGAAATTGATACAGATGGCCACTGTCTGGTATGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: NCIDTVFNPPKDVLQ*WHEIDTDGHCLVCV Trigger: CACACATACCAGACAGTGGCCATCTGTATCAATTTCATGCCATCACTGCAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR GCA 90 bp | TCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTaGAGTGATGGCATGAAATTGATACAGATGGCCACTGTCTGGTAT | + |
|
Preference number: 1 (lower is better) Translates to: SRTVLIQFSIHQRMC*SDGMKLIQMATVWY Trigger: ATACCAGACAGTGGCCATCTGTATCAATTTCATGCCATCACTGCAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGAGCCACAGCTGTCCCTGACCCTACCCTCACAGAGGGCCATCAGCACCTTGAACCCTCTCCTTCTTaGAAATGGCTCAAGAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: QGATAVPDPTLTEGHQHLEPSPS*KWLKRA Trigger: GGCCCTCTTGAGCCATTTCCAAGAAGGAGAGGGTTC...AAGGTGCTGATGGCCCTCTGTGAGGGTAGGGTCAGGGACAGCTGTGGCTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 90 bp | TCTGCTCGTCATCGGGAATCCAGAACTCCAGGGCTCATTGTAGTCTaGTCTGGGTGGACCGTGTCTCTCTTCTGTCCCTGTGGCCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SARHRESRTPGLIVV*SGWTVSLFCPCGQP Trigger: AGGCTGGCCACAGGGACAGAAGAGAGACACGGTCCACCCAGACAAGACTACAATGAGCCCTGGAGTTCTGGATTCCCGATGACGAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTGAAACATCCATAGGTCTCCAGTaGGAGCAGAGACCTCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LTLRDAHTFQPVDAVPETSIGLQ*EQRPQV Trigger: CACTTGAGGTCTCTGCTCTCACTGGAGACCTATGGA...TGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTGAAACATCCTGCCTGCTTTTATaGAGGATGGAGCCCAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LTLRDAHTFQPVDAVPETSCLLL*RMEPRA Trigger: AGCTCTGGGCTCCATCCTGCATAAAAGCAGGCAGGA...TGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTGCGTGGGCAAGATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACGAGTTCAGGAAGGCCTaGGCTTTAGGATGGCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: RLRGQDVASKVSSLRIMNEFRKA*ALGWHP Trigger: AGGATGCCATCCTAAAGCTCAGGCCTTCCTGAACTC...GTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATCTTGCCCACGCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTGCGTGGGCAAGATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACGTGCACCATCCTGCCTaGTTTTATGCAGGATGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: RLRGQDVASKVSSLRIMNVHHPA*FYAGWS Trigger: GCTCCATCCTGCATAAAAGCAGGCAGGATGGTGCAC...GTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATCTTGCCCACGCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTCTCTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTATGCAGATACTCTTCTaGCTGGGTTCTCACCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: CSLTLRDAHTFQPVDAVPMQILF*LGSHLP Trigger: GGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCAT...AGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAGAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR GCA 90 bp | GATACATACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTGGGTCAAAAGAGCTGTaGGTGTTCTCAAGAGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: DTYMQILFWLGSHLPRRCGSKEL*VFSRGP Trigger: AGGTCCTCTTGAGAACACGCACAGCTCTTTTGACCC...ACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTATGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTGCGTGGGCAAGATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACGTAGTCTTGTCTGGGTaGACCGTGTCTCTCTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RLRGQDVASKVSSLRIMNVVLSG*TVSLFC Trigger: ACAGAAGAGAGACACGGTCCACCCAGACAAGACTAC...GTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATCTTGCCCACGCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTGCGTGGGCAAGATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACCTCAAGTGGAGCTCCTaGGAATCATCCAAGTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RLRGQDVASKVSSLRIMNLKWSS*ESSKSL Trigger: CAGAGACTTGGATGATTCCCAGGAGCTCCACTTGAG...GTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATCTTGCCCACGCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTGAAACATGTCTCAATGTCTGGTaGCATGCATCTCAGCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LTLRDAHTFQPVDAVPETCLNVW*HASQQS Trigger: ACTTTGCTGAGATGCATGGCACCAGACATTGAGACA...TGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTGAAACAATGTCAAAGTATTGCTaGAGGTGGGAGAGCCACATA | + |
|
Preference number: 2 (lower is better) Translates to: LTLRDAHTFQPVDAVPETMSKYC*RWESHI Trigger: TATGTGGCTCTCCCACCTGCAGCAATACTTTGACAT...TGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTGCGTGGGCAAGATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACGAGCTTTGCACACGTTaGGCAAGCATTCTACCAACT | + |
|
Preference number: 2 (lower is better) Translates to: RLRGQDVASKVSSLRIMNELCTR*ASILPT Trigger: AGTTGGTAGAATGCTTGCCCAACGTGTGCAAAGCTC...GTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATCTTGCCCACGCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 90 bp | AGTGGGACAGCTATAGGCAGTCAAGGAGGATTGGGAAACCCCTTATaGAGTAAGAGATACATACATGCAGATACTCTTCTGGCTGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SGTAIGSQGGLGNPL*SKRYIHADTLLAGF Trigger: GAACCCAGCCAGAAGAGTATCTGCATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCCTATAGCTGTCCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 90 bp | TGGATGCTTCTAGATGCTGGGAAGGGCAAGGAAATCCTGAGAGCTTaGGAAGCACAGCTGAAACAACACCCTGATTTTAGTTCAGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: WMLLDAGKGKEILRA*EAQLKQHPDFSSVK Trigger: CTTGACTGAACTAAAATCAGGGTGTTGTTTCAGCTGTGCTTCCAAAGCTCTCAGGATTTCCTTGCCCTTCCCAGCATCTAGAAGCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR TCA 90 bp | TACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTACATTTTACTTGATGGTGACTTaGAATTCTGATCTTCCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: YMQILFWLGSHLPRRCTFYLMVT*NSDLPE Trigger: CTCGGGAAGATCAGAATTTCAAGTCACCATCAAGTA...AAATGTACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTAGAGAAGATACCAAGACAGACTTaGCCAGCCATGGATGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ASKVSSLRIMNHTYFLEKIPRQT*PAMDAS Trigger: AGAAGCATCCATGGCTGGGCAAGTCTGTCTTGGTAT...CTTCTCTAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTATATAGTCCAGATTGGCCTCAAACTCACCAGGATATGCCTGCCTCTGTCTGATTTGATGGCACCTTaGAAAAGCTACTCTTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HYIVQIGLKLTRICLPLSDLMAP*KSYSSF Trigger: GAAGGAAGAGTAGCTTTTGCAAGGTGCCATCAAATC...AGACAGAGGCAGGCATATCCTGGTGAGTTTGAGGCCAATCTGGACTATATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTTCTCACCTTCCCCGCAGGTGTACATTTATCTAGAGGTCTACAAAAACCAGGGCCTTCAATTCACTaGATACTTGATGGTGACTTG | + |
|
Preference number: 2 (lower is better) Translates to: WVLTFPAGVHLSRGLQKPGPSIH*ILDGDL Trigger: CAAGTCACCATCAAGTATGCAGTGAATTGAAGGCCC...TGGTTTTTGTAGACCTCTAGATAAATGTACACCTGCGGGGAAGGTGAGAACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTATGCTTTTATGCAGGATaGAGCCCAGAGCTTTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: DVASKVSSLRIMNHTYFLCFYAG*SPELCT Trigger: TGTGCAAAGCTCTGGGCTCCATCCTGCATAAAAGCA...TAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAATCCTGAGAGCTTTGGAAGCACAGCTGAAACAACACCCTGATTTTAGTTCAGGTGACTTGAAATTCTaGTCTTCCCGAGACTACAGG | + |
|
Preference number: 2 (lower is better) Translates to: EILRALEAQLKQHPDFSSGDLKF*SSRDYR Trigger: CCTGTAGTCTCGGGAAGATCAGAATTTCAAGTCACC...TGAACTAAAATCAGGGTGTTGTTTCAGCTGTGCTTCCAAAGCTCTCAGGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGTCAAGGAGGATTGGGAAACCCCTTATTGAGTAAGAGATACATACATGCACAATGTCTGGTGCCATaGATCTCAGCAAAGTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: GSQGGLGNPLLSKRYIHAQCLVP*ISAKSL Trigger: CAAAGACTTTGCTGAGATGCATGGCACCAGACATTG...TGCATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 90 bp | CAGTTTTCAATCCACCAAAGGATGTGCTGCAGTGATGGCATGAAATaGATACAGATGGCCACTGTCTGGTATGTGTGTGTACTACAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: QFSIHQRMCCSDGMK*IQMATVWYVCVLQY Trigger: ATACTGTAGTACACACACATACCAGACAGTGGCCATCTGTATCAATTTCATGCCATCACTGCAGCACATCCTTTGGTGGATTGAAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGTCTCTTCTGTCCCTGTaGCCAGCCTCAACACAACCC | + |
|
Preference number: 2 (lower is better) Translates to: NSNLQNCIDTVFNPPKDVSLLSL*PASTQP Trigger: GGGTTGTGTTGAGGCTGGCCACAGGGACAGAAGAGA...CACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR TCA 90 bp | AATTCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGGATTGGGCTTCCCTCTaGCTTCTTGATGGGACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: NSNLQNCIDTVFNPPKDVDWASL*LLDGTV Trigger: AACTGTCCCATCAAGAAGTCAGAGGGAAGCCCAATC...CACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAATCCTGAGAGCTTTGGAAGCACAGCTGAAACAACACCCTGATTTTAGTTCATGGGAAACCCCTTATTaGGTAAGAGATACATACATG | + |
|
Preference number: 2 (lower is better) Translates to: EILRALEAQLKQHPDFSSWETPY*VRDTYM Trigger: CATGTATGTATCTCTTACTCAATAAGGGGTTTCCCA...TGAACTAAAATCAGGGTGTTGTTTCAGCTGTGCTTCCAAAGCTCTCAGGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGATAGAAGTCATGATTTaGCCATCACTGGAAGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SNLQNCIDTVFNPPKDVLIEVMI*PSLEAV Trigger: GACTGCTTCCAGTGATGGGCAAATCATGACTTCTAT...CAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 72 bp | CGGGGAGGAAGCATACAGGGCCCCTGCTCAGCATGGTaGTTTCAGGTGAAGCAAGGAGCCACAGCTGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RGGSIQGPCSAW*FQVKQGATAVP Trigger: AGGGACAGCTGTGGCTCCTTGCTTCACCTGAAATCACCATGCTGAGCAGGGGCCCTGTATGCTTCCTCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | CTTGTCTGGGTGGACCGTGTCTCTCTTCTGTCCCTGTaGCCAGCCTCAACACAACCCGAGTTCAGGAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LVWVDRVSLLSL*PASTQPEFRKA Trigger: GGCCTTCCTGAACTCGGGTTGTGTTGAGGCTGGCCACAGGGACAGAAGAGAGACACGGTCCACCCAGACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 72 bp | GTGATTTCAGGTGAAGCAAGGAGCCACAGCTGTCCCTaGCCCTACCCTCACAGAGGGCCATCAGCACCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VISGEARSHSCP*PYPHRGPSAPW Trigger: CCAAGGTGCTGATGGCCCTCTGTGAGGGTAGGGTCAGGGACAGCTGTGGCTCCTTGCTTCACCTGAAATCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR GCA 72 bp | CGAGACTACAGGTGTGCACCATCCTGCCTGCTTTTATaGAGGATGGAGCCCAGAGCTTTGCACACGTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RDYRCAPSCLLL*RMEPRALHTLG Trigger: GCCCAACGTGTGCAAAGCTCTGGGCTCCATCCTGCATAAAAGCAGGCAGGATGGTGCACACCTGTAGTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | TCCAGAACTCCAGGGCTCATTGTAGTCTTGTCTGGGTaGACCGTGTCTCTCTTCTGTCCCTGTGGCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SRTPGLIVVLSG*TVSLFCPCGQP Trigger: AGGCTGGCCACAGGGACAGAAGAGAGACACGGTCCACCCAGACAAGACTACAATGAGCCCTGGAGTTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | AGCACACAGCCACAGAGTAGAGGCAACAAGGCAGGATaGGTTACCCTGGATGTCCTATCTGAGGGCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: STQPQSRGNKAG*VTLDVLSEGQS Trigger: GCTCTGGCCCTCAGATAGGACATCCAGGGTAACCCATCCTGCCTTGTTGCCTCTACTCTGTGGCTGTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | GGAATCCAGAACTCCAGGGCTCATTGTAGTCTTGTCTaGGTGGACCGTGTCTCTCTTCTGTCCCTGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GIQNSRAHCSLV*VDRVSLLSLWP Trigger: TGGCCACAGGGACAGAAGAGAGACACGGTCCACCCAGACAAGACTACAATGAGCCCTGGAGTTCTGGATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR GCA 72 bp | ACCTCAAGTGGAGCTCCTGGGAATCATCCAAGTCTCTaGTCGTCATCGGGAATCCAGAACTCCAGGGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TSSGAPGNHPSL*SSSGIQNSRAH Trigger: ATGAGCCCTGGAGTTCTGGATTCCCGATGACGAGCAGAGACTTGGATGATTCCCAGGAGCTCCACTTGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR GCA 72 bp | GATCTTCCCGAGACTACAGGTGTGCACCATCCTGCCTaGTTTTATGCAGGATGGAGCCCAGAGCTTTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: DLPETTGVHHPA*FYAGWSPELCT Trigger: TGTGCAAAGCTCTGGGCTCCATCCTGCATAAAAGCAGGCAGGATGGTGCACACCTGTAGTCTCGGGAAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | ACAGGTGTGCACCATCCTGCCTGCTTTTATGCAGGATaGAGCCCAGAGCTTTGCACACGTTGGGCAAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: TGVHHPACFYAG*SPELCTRWASI Trigger: AATGCTTGCCCAACGTGTGCAAAGCTCTGGGCTCCATCCTGCATAAAAGCAGGCAGGATGGTGCACACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 72 bp | ACCCTGGATGTCCTATCTGAGGGCCAGAGCTACCCATaGCTCACTTTAGCTGGGCATCTCTGGTCAAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: TLDVLSEGQSYP*LTLAGHLWSRI Trigger: TATCCTTGACCAGAGATGCCCAGCTAAAGTGAGTCATGGGTAGCTCTGGCCCTCAGATAGGACATCCAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR GCA 72 bp | CCTGCCTGCTTTTATGCAGGATGGAGCCCAGAGCTTTaGACACGTTGGGCAAGCATTCTACCAACTTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PACFYAGWSPEL*TRWASILPTWL Trigger: TAGCCAAGTTGGTAGAATGCTTGCCCAACGTGTGCAAAGCTCTGGGCTCCATCCTGCATAAAAGCAGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR GCA 72 bp | CCAAGACAGACTTGCCCAGCCATGGATGCTTCTAGATaGTGGGAAGGGCAAGGAAATCCTGAGAGCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PRQTCPAMDASR*WEGQGNPESFG Trigger: TCCAAAGCTCTCAGGATTTCCTTGCCCTTCCCAGCATCTAGAAGCATCCATGGCTGGGCAAGTCTGTCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | AGTGACCAGCCATACCAAGACAGACTTGCCCAGCCATaGATGCTTCTAGATGCTGGGAAGGGCAAGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: SDQPYQDRLAQP*MLLDAGKGKEI Trigger: GATTTCCTTGCCCTTCCCAGCATCTAGAAGCATCCATGGCTGGGCAAGTCTGTCTTGGTATGGCTGGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTGAAACACTTCCCTCTGACTTCTaGATGGGACAGTTCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LTLRDAHTFQPVDAVPETLPSDF*MGQFFM Trigger: CATGAAGAACTGTCCCATCAAGAAGTCAGAGGGAAG...TGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 72 bp | TGGCCAGCCTCAACACAACCCGAGTTCAGGAAGGCCTaGGCTTTAGGATGGCATCCTCATAGAAGTCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: WPASTQPEFRKA*ALGWHPHRSHD Trigger: ATCATGACTTCTATGAGGATGCCATCCTAAAGCTCAGGCCTTCCTGAACTCGGGTTGTGTTGAGGCTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 72 bp | CTTTGCAGATCCACAGACTGGTCCTCCAACCTGTACTaGGGTTACAGCTGTTGGACTTTGGCTTGTCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCRSTDWSSNLY*GYSCWTLACPH Trigger: ATGGGGACAAGCCAAAGTCCAACAGCTGTAACCTCAGTACAGGTTGGAGGACCAGTCTGTGGATCTGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR GCA 72 bp | TCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTaGCTGAAACACAGTAAAGGGACTTTTCCTGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SEMLTPSSQWML*LKHSKGTFPEW Trigger: CCACTCAGGAAAAGTCCCTTTACTGTGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | TTTTATGCAGGATGGAGCCCAGAGCTTTGCACACGTTaGGCAAGCATTCTACCAACTTGGCTACACCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FYAGWSPELCTR*ASILPTWLHPQ Trigger: CTGAGGGTGTAGCCAAGTTGGTAGAATGCTTGCCCAACGTGTGCAAAGCTCTGGGCTCCATCCTGCATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | CCTCCAACCTGTACTGAGGTTACAGCTGTTGGACTTTaGCTTGTCCCCATGGAAGAGTCAACCTCTTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PPTCTEVTAVGL*LVPMEESTSSF Trigger: GAAGGAAGAGGTTGACTCTTCCATGGGGACAAGCCAAAGTCCAACAGCTGTAACCTCAGTACAGGTTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | CTCTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTaGATGCTGTGCCTGAAACACAGTAAAGGGACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLPSEMLTPSSQ*MLCLKHSKGTF Trigger: AAAAGTCCCTTTACTGTGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | AGAGTCCTGAACTACTGTGGCTTTCCCTCTACATCATaGCAGGAGGAACTTTCGCAGTCTCCTCACTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RVLNYCGFPSTS*QEELSQSPHSV Trigger: TACAGAGTGAGGAGACTGCGAAAGTTCCTCCTGCCATGATGTAGAGGGAAAGCCACAGTAGTTCAGGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | CTGAGGTTACAGCTGTTGGACTTTGGCTTGTCCCCATaGAAGAGTCAACCTCTTCCTTCTGTACACAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LRLQLLDFGLSP*KSQPLPSVHSY Trigger: GTAGCTGTGTACAGAAGGAAGAGGTTGACTCTTCCATGGGGACAAGCCAAAGTCCAACAGCTGTAACCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 72 bp | AAAAGCACATTGCCATTTTCATCCATAGGTCTCCAGTaGGAGCAGAGACCTCAAGTGGAGCTCCTGGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: KSTLPFSSIGLQ*EQRPQVELLGI Trigger: GATTCCCAGGAGCTCCACTTGAGGTCTCTGCTCTCACTGGAGACCTATGGATGAAAATGGCAATGTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 72 bp | GGGGGCCTTCAATTCACTGCATACTTGATGGTGACTTaGAATTCTGATCTTCCCGAGACTACAGGTGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GGLQFTAYLMVT*NSDLPETTGVH Trigger: GTGCACACCTGTAGTCTCGGGAAGATCAGAATTTCAAGTCACCATCAAGTATGCAGTGAATTGAAGGCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CAA 90 bp | GATACATACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTAGATTTGATGGCACCTaGCAAAAGCTACTCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: DTYMQILFWLGSHLPRRCRFDGT*QKLLFL Trigger: AAGGAAGAGTAGCTTTTGCAAGGTGCCATCAAATCT...ACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTATGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTAGAGAAGTTACATGTCAAAGTATaGCTGCAGGTGGGAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ASKVSSLRIMNHTYFLEKLHVKV*LQVGEP Trigger: TGGCTCTCCCACCTGCAGCAATACTTTGACATGTAA...CTTCTCTAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 72 bp | AAGCTACTCTTCCTTCTAGCTGATTGGGCTTCCCTCTaGCTTCTTGATGGGACAGTTCTTCATGTCTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: KLLFLLADWASL*LLDGTVLHVSM Trigger: CATTGAGACATGAAGAACTGTCCCATCAAGAAGTCAGAGGGAAGCCCAATCAGCTAGAAGGAAGAGTAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 72 bp | TCAATTCACTGCATACTTGATGGTGACTTGAAATTCTaGTCTTCCCGAGACTACAGGTGTGCACCATCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SIHCILDGDLKF*SSRDYRCAPSC Trigger: GCAGGATGGTGCACACCTGTAGTCTCGGGAAGATCAGAATTTCAAGTCACCATCAAGTATGCAGTGAATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGTCAAGGAGGATTGGGAAACCCCTTATTGAGTAAGAGATACATACATGCACCAGAAGATCAAGATTaGATGGCACCTTGCAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSQGGLGNPLLSKRYIHAPEDQD*MAPCKS Trigger: GCTTTTGCAAGGTGCCATCAAATCTTGATCTTCTGG...TGCATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | ACCTTGGGTAGCTGGGTAGGAGACAACCTTCTCTCCTaGAAAGGAGTTAAAGGAAAGTTTTCGGAAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TLGSWVGDNLLS*KGVKGKFSERK Trigger: TTTTCTTTCCGAAAACTTTCCTTTAACTCCTTTCCAGGAGAGAAGGTTGTCTCCTACCCAGCTACCCAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCCTGAGAGCTTTGGAAGCACAGCTGAAACAACACCCTGATTTTAGTTCACATAGAAGTCATGATTaGCCCATCACTGGAAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EILRALEAQLKQHPDFSSHRSHD*PITGSS Trigger: ACTGCTTCCAGTGATGGGCAAATCATGACTTCTATG...TGAACTAAAATCAGGGTGTTGTTTCAGCTGTGCTTCCAAAGCTCTCAGGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR TCA 72 bp | CTAAACCAAACACTTTATAGACTGGGTGATTTTGTATaGTCTCCTTTGAGTACCAGCAGCAGGAGGATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LNQTLYRLGDFV*SPLSTSSRRMG Trigger: TCCCATCCTCCTGCTGCTGGTACTCAAAGGAGATCATACAAAATCACCCAGTCTATAAAGTGTTTGGTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CCA 72 bp | GTTTTGTTTTATCAAGAAAGGGTTTCTCTGTGTAGCTaGATTTCTGTGTGTAGCCCTGGCTGTCCTAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: VLFYQERVSLCS*ISVCSPGCPRT Trigger: AGTTCTAGGACAGCCAGGGCTACACACAGAAATCCAGCTACACAGAGAAACCCTTTCTTGATAAAACAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR GCA 72 bp | ACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTaGTGCAGTGATGGCATGAAATTGATACAGATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TVLIQFSIHQRM*CSDGMKLIQMA Trigger: GGCCATCTGTATCAATTTCATGCCATCACTGCAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTATTGGGAAACCCCTTATaGAGTAAGAGATACATACAT | + |
|
Preference number: 3 (lower is better) Translates to: DVASKVSSLRIMNHTYFLLGNPL*SKRYIH Trigger: ATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAA...TAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 72 bp | TCCCTGACCCTACCCTCACAGAGGGCCATCAGCACCTaGGGTAGCTGGGTAGGAGACAACCTTCTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTLPSQRAIST*GSWVGDNLLSW Trigger: CCAGGAGAGAAGGTTGTCTCCTACCCAGCTACCCAAGGTGCTGATGGCCCTCTGTGAGGGTAGGGTCAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGAGCCACAGCTGTCCCTGACCCTACCCTCACAGAGGGCCATCAGCACCTTTGCAATACTGAAGCCTaGGACGTTCCTGCGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGATAVPDPTLTEGHQHLCNTEA*DVPAVE Trigger: TTCCACCGCAGGAACGTCTCAGGCTTCAGTATTGCA...AAGGTGCTGATGGCCCTCTGTGAGGGTAGGGTCAGGGACAGCTGTGGCTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 72 bp | CCAACACGTGAGACTGACGGTCTCCTCAAGGGGCACTaGAAGGGAGAAGGCATCGGGGAGGAAGCATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTRETDGLLKGH*KGEGIGEEAYR Trigger: CCTGTATGCTTCCTCCCCGATGCCTTCTCCCTTCAAGTGCCCCTTGAGGAGACCGTCAGTCTCACGTGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | GAAATCCTGAGAGCTTTGGAAGCACAGCTGAAACAACACCCTGATTTTAGTTCAGCAGCAGGCGTGCTGTaGCCAGCAGCAGGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EILRALEAQLKQHPDFSSAAGVL*PAAGPP Trigger: TGGGGGCCCTGCTGCTGGGCACAGCACGCCTGCTGC...TGAACTAAAATCAGGGTGTTGTTTCAGCTGTGCTTCCAAAGCTCTCAGGATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCGTGGGCAAGATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACCTCTCTTGCGTATGCTaGTGCAGCTTCTGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRGQDVASKVSSLRIMNLSCVC*CSFWPG Trigger: GCCAGGCCAGAAGCTGCAGCAGCATACGCAAGAGAG...GTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATCTTGCCCACGCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCGTGGGCAAGATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACTCCTCTGCCCGGGACTaGTGCTCCTGGATGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: RLRGQDVASKVSSLRIMNSSARD*CSWMIM Trigger: CATGATCATCCAGGAGCAGCAGTCCCGGGCAGAGGA...GTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATCTTGCCCACGCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | GATACATACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTAAGCCGAAGGATTCCTaGGCTCTGGGCATCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DTYMQILFWLGSHLPRRCKPKDS*ALGILV Trigger: GACCAGGATGCCCAGAGCCCAGGAATCCTTCGGCTT...ACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTATGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 72 bp | CATCGGGAATCCAGAACTCCAGGGCTCATTGTAGTCTaGTCTGGGTGGACCGTGTCTCTCTTCTGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRESRTPGLIVV*SGWTVSLFCPC Trigger: ACAGGGACAGAAGAGAGACACGGTCCACCCAGACAAGACTACAATGAGCCCTGGAGTTCTGGATTCCCGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | GGGGACGAGGAGATCTGTGATAAATTCTGCAGTGGGACAGCTATAGGCAGTCAACACCCTCTTGCATCTTaGTCCGGGACACGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDEEICDKFCSGTAIGSQHPLAS*SGTRCH Trigger: ATGGCACCGTGTCCCGGATCAAGATGCAAGAGGGTG...TTGACTGCCTATAGCTGTCCCACTGCAGAATTTATCACAGATCTCCTCGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | CACTATATAGTCCAGATTGGCCTCAAACTCACCAGGATATGCCTGCCTCTGTCTGATGTTCCAAGACACTaGGGAGAGGGCAGGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HYIVQIGLKLTRICLPLSDVPRH*GEGRQA Trigger: GGCCTGCCTGCCCTCTCCTCAGTGTCTTGGAACATC...AGACAGAGGCAGGCATATCCTGGTGAGTTTGAGGCCAATCTGGACTATATAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | GATACATACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTTCCTGGTCGCAGCCTTaGAGGGAGAGGTTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DTYMQILFWLGSHLPRRCSWSQP*RERLKF Trigger: GAACTTCAACCTCTCCCTGCAAGGCTGCGACCAGGA...ACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTATGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | GGGGACGAGGAGATCTGTGATAAATTCTGCAGTGGGACAGCTATAGGCAGTCAAGGCCTCTCTTGCGTATaGTGCTGCAGCTTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GDEEICDKFCSGTAIGSQGLSCV*CCSFWP Trigger: AGGCCAGAAGCTGCAGCAGCATACGCAAGAGAGGCC...TTGACTGCCTATAGCTGTCCCACTGCAGAATTTATCACAGATCTCCTCGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCGTGGGCAAGATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACCCTGGATCTTCTCGATaGAGCCTCCTGAGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLRGQDVASKVSSLRIMNPGSSR*SLLSRR Trigger: CCTTCTGCTCAGGAGGCTCCATCGAGAAGATCCAGG...GTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATCTTGCCCACGCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | GATACATACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTGGCCACGGTCCCAGTTaGGTGATCTTAGGTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: DTYMQILFWLGSHLPRRCGHGPS*VILGRP Trigger: AGGTCTACCTAAGATCACCCAACTGGGACCGTGGCC...ACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTATGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 72 bp | TCCTGCCTGCTTTTATGCAGGATGGAGCCCAGAGCTTaGCACACGTTGGGCAAGCATTCTACCAACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLLLCRMEPRA*HTLGKHSTNLA Trigger: AGCCAAGTTGGTAGAATGCTTGCCCAACGTGTGCAAAGCTCTGGGCTCCATCCTGCATAAAAGCAGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | GCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTAGAGAAGGCTGAAGATCTCCTCTaGCCGGGACTGCTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASKVSSLRIMNHTYFLEKAEDLL*PGLLLL Trigger: CAGGAGCAGCAGTCCCGGGCAGAGGAGATCTTCAGC...CTTCTCTAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | CAATTTTCTGTTTACATGTCAAAGTATTGCTGCAGGTGGGAGAGCCACATACCAGGGCTCTGGGCATCCTaGTCGCAGCCTTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFSVYMSKYCCRWESHIPGLWAS*SQPCRE Trigger: CTCCCTGCAAGGCTGCGACCAGGATGCCCAGAGCCC...TGGTATGTGGCTCTCCCACCTGCAGCAATACTTTGACATGTAAACAGAAAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | GATACATACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTGTCTCCACTGGTCCTTaGGTATGGAGTAAGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DTYMQILFWLGSHLPRRCVSTGP*VWSKGM Trigger: CATCCCCTTACTCCATACCCAAGGACCAGTGGAGAC...ACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTATGTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTATTGAGTAAGAGATACATACATGCAGATACTCTTCTGGCTGGGTTCTCAGTGAGTCACCCCGTCTaGACAGCTCTCGCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSKRYIHADTLLAGFSVSHPV*TALAWS Trigger: GGACCAGGCGAGAGCTGTGCAGACGGGGTGACTCAC...TGAGAACCCAGCCAGAAGAGTATCTGCATGTATGTATCTCTTACTCAATAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCTCACCTTCCCCGCAGGTGTACATTTATCTAGAGGTCTACAAAAACCATCTTGCGTATGCTGCTaGAGCTTCTGGCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: WVLTFPAGVHLSRGLQKPSCVCC*SFWPGT Trigger: GGTGCCAGGCCAGAAGCTGCAGCAGCATACGCAAGA...TGGTTTTTGTAGACCTCTAGATAAATGTACACCTGCGGGGAAGGTGAGAACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCTCACCTTCCCCGCAGGTGTACATTTATCTAGAGGTCTACAAAAACCAGATCCACCCGAGTCCTaGAGCAAGTGCCCATACACC | + |
|
Preference number: 4 (lower is better) Translates to: WVLTFPAGVHLSRGLQKPDPPES*SKCPYT Trigger: GGTGTATGGGCACTTGCTGCAGGACTCGGGTGGATC...TGGTTTTTGTAGACCTCTAGATAAATGTACACCTGCGGGGAAGGTGAGAACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTCAAGGAGGATTGGGAAACCCCTTATTGAGTAAGAGATACATACATGCAAGGATTCCTGGGCTCTaGGCATCCTGGTCGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQGGLGNPLLSKRYIHARIPGL*ASWSQP Trigger: AGGCTGCGACCAGGATGCCCAGAGCCCAGGAATCCT...TGCATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 72 bp | CTTTTATGCAGGATGGAGCCCAGAGCTTTGCACACGTaGGGCAAGCATTCTACCAACTTGGCTACACCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLCRMEPRALHT*GKHSTNLATPS Trigger: TGAGGGTGTAGCCAAGTTGGTAGAATGCTTGCCCAACGTGTGCAAAGCTCTGGGCTCCATCCTGCATAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 72 bp | AGACTGGTCCTCCAACCTGTACTGAGGTTACAGCTGTaGGACTTTGGCTTGTCCCCATGGAAGAGTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RLVLQPVLRLQL*DFGLSPWKSQP Trigger: AGGTTGACTCTTCCATGGGGACAAGCCAAAGTCCAACAGCTGTAACCTCAGTACAGGTTGGAGGACCAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | GATACATACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTGACACGGGCCTGACATaGAGTCAATATTCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DTYMQILFWLGSHLPRRCDTGLT*SQYSSR Trigger: TCGAGAAGAATATTGACTGCATGTCAGGCCCGTGTC...ACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTATGTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | GAAATCCTGAGAGCTTTGGAAGCACAGCTGAAACAACACCCTGATTTTAGTTCAAGCCTGAGACGTTCCTaGGGTGGAACCAGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EILRALEAQLKQHPDFSSSLRRS*GGTRAG Trigger: ACCTGCCCTGGTTCCACCGCAGGAACGTCTCAGGCT...TGAACTAAAATCAGGGTGTTGTTTCAGCTGTGCTTCCAAAGCTCTCAGGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | CACTATATAGTCCAGATTGGCCTCAAACTCACCAGGATATGCCTGCCTCTGTCTAGGAGCCAGCTCCTCTaGAGTGAACTTTGCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HYIVQIGLKLTRICLPLSRSQLL*SELCSW Trigger: CCAACTGCAAAGTTCACTGCAGAGGAGCTGGCTCCT...AGACAGAGGCAGGCATATCCTGGTGAGTTTGAGGCCAATCTGGACTATATAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | TACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTACATTTCCTCTGGGTTGGTGGTaGAGCCTGGGATATAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: YMQILFWLGSHLPRRCTFPLGWW*SLGYSI Trigger: AATACTATATCCCAGGCTCCACCACCAACCCAGAGG...AAATGTACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | CACTATATAGTCCAGATTGGCCTCAAACTCACCAGGATATGCCTGCCTCTGTCTCGTGGTACCCGAAGCTaGTGTTACAAGGCCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HYIVQIGLKLTRICLPLSRGTRS*CYKASL Trigger: AAGAGAGGCCTTGTAACACCAGCTTCGGGTACCACG...AGACAGAGGCAGGCATATCCTGGTGAGTTTGAGGCCAATCTGGACTATATAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTAGAGAAGGTGGTGCTGGTCACGTaGTACCCGAAGCTGGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ASKVSSLRIMNHTYFLEKVVLVT*YPKLVL Trigger: TAACACCAGCTTCGGGTACCACGTGACCAGCACCAC...CTTCTCTAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGTCATGATTTGCCCATCACTGGAAGCAGTCCACCAGAAGATCAAGATTTGTTGCAGTTGGGGTCCTaGAGAATAGAGGGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSHDLPITGSSPPEDQDLLQLGS*RIEGVG Trigger: CCCCACCCCCTCTATTCTCCAGGACCCCAACTGCAA...CAAATCTTGATCTTCTGGTGGACTGCTTCCAGTGATGGGCAAATCATGACTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | GATACATACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTAAAAGGACACGGGCCTaGCATGCAGTCAATATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTYMQILFWLGSHLPRRCKRTRA*HAVNIL Trigger: AAGAATATTGACTGCATGTCAGGCCCGTGTCCTTTT...ACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTATGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGTCATGATTTGCCCATCACTGGAAGCAGTCCACCAGAAGATCAAGATTTGCAGAGCAATCTCAGATaGTTCTGTCCCGCGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSHDLPITGSSPPEDQDLQSNLR*FCPAQQ Trigger: CTGCTGCGCGGGACAGAAGCATCTGAGATTGCTCTG...CAAATCTTGATCTTCTGGTGGACTGCTTCCAGTGATGGGCAAATCATGACTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | CTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTGAAACAATCTTCAAGACAAAGTaGTTCTCTGGATTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTLRDAHTFQPVDAVPETIFKTK*FSGLLQ Trigger: CTGCAGCAATCCAGAGAAGCACTTTGTCTTGAAGAT...TGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGTCAAGGAGGATTGGGAAACCCCTTATTGAGTAAGAGATACATACATGCAGCCATGTTTCCTGGCTaGTTGTCCTCCAGCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSQGGLGNPLLSKRYIHAAMFPG*LSSSLN Trigger: GTTCAGGCTGGAGGACAAGCAGCCAGGAAACATGGC...TGCATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | GATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTACGGGACTGCTGCTCCTaGATGATCATGAATGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: DVASKVSSLRIMNHTYFLRDCCS*MIMNAR Trigger: GCGTGCATTCATGATCATCCAGGAGCAGCAGTCCCG...TAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | CACTATATAGTCCAGATTGGCCTCAAACTCACCAGGATATGCCTGCCTCTGTCTGTGATGGTGGAAACTTaGCTTAGGCAGGACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HYIVQIGLKLTRICLPLSVMVET*LRQDFL Trigger: GAGGAAGTCCTGCCTAAGCCAAGTTTCCACCATCAC...AGACAGAGGCAGGCATATCCTGGTGAGTTTGAGGCCAATCTGGACTATATAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | GATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTAAGCCAGCTGTCAGGGTaGCATTGGTACTACAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVASKVSSLRIMNHTYFLSQLSG*HWYYKS Trigger: GGACTTGTAGTACCAATGTCACCCTGACAGCTGGCT...TAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | GATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTACTCGATGGAGCCTCCTaGGCAGAAGGAACCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DVASKVSSLRIMNHTYFLLDGAS*AEGTKV Trigger: TACTTTGGTTCCTTCTGCTCAGGAGGCTCCATCGAG...TAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGCTTCCTCCTCCAAGCTaGAGATCTCCTCTGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLQNCIDTVFNPPKDVLLPPPS*RSPLPG Trigger: CCCGGGCAGAGGAGATCTTCAGCTTGGAGGAGGAAG...CAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | CTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTGAAACACCATGTAGGTTTTATTaGTTTCATCCTGTGGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLRDAHTFQPVDAVPETPCRFY*FHPVDV Trigger: AACGTCCACAGGATGAAAGCAATAAAACCTACATGG...TGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGTCAAGGAGGATTGGGAAACCCCTTATTGAGTAAGAGATACATACATGCATTCCAGGAGAAGTCATaGAGCTGTACAGGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSQGGLGNPLLSKRYIHAFQEKS*SCTGSW Trigger: CCAGCTGCCTGTACAGCTGCATGACTTCTCCTGGAA...TGCATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTAGAGAAGGTTGGTGGTGGAGCCTaGGATATAGTATTCAACGCG | + |
|
Preference number: 4 (lower is better) Translates to: ASKVSSLRIMNHTYFLEKVGGGA*DIVFNA Trigger: CGCGTTGAATACTATATCCCAGGCTCCACCACCAAC...CTTCTCTAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | TCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGCAGCCTGAACACCTCTaGGTTGGTGGTGGAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLQNCIDTVFNPPKDVLQPEHL*VGGGAW Trigger: CCAGGCTCCACCACCAACCCAGAGGTGTTCAGGCTG...CAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTCAAGGAGGATTGGGAAACCCCTTATTGAGTAAGAGATACATACATGCACCTTTCGGGAACTTTTaGGTCTGGGGCATCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSQGGLGNPLLSKRYIHAPFGNF*VWGIWV Trigger: TACCCAGATGCCCCAGACCCAAAAGTTCCCGAAAGG...TGCATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | TACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTACATTTAGATGCCTTCCTCTTTaGAATACGGTGTATAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YMQILFWLGSHLPRRCTFRCLPL*NTVYRT Trigger: TGTCCTATACACCGTATTTCAAAGAGGAAGGCATCT...AAATGTACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | CACTATATAGTCCAGATTGGCCTCAAACTCACCAGGATATGCCTGCCTCTGTCTTTAACCCAGAAGCTGTaGTGGTGGAAACTTGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HYIVQIGLKLTRICLPLSLTQKL*WWKLGL Trigger: TAAGCCAAGTTTCCACCATCACAGCTTCTGGGTTAA...AGACAGAGGCAGGCATATCCTGGTGAGTTTGAGGCCAATCTGGACTATATAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCTCACCTTCCCCGCAGGTGTACATTTATCTAGAGGTCTACAAAAACCAATTTTCACACCCTCTTaGATCTTGATCCGGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: WVLTFPAGVHLSRGLQKPIFTPS*ILIRDT Trigger: CGTGTCCCGGATCAAGATGCAAGAGGGTGTGAAAAT...TGGTTTTTGTAGACCTCTAGATAAATGTACACCTGCGGGGAAGGTGAGAACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | CAATTTTCTGTTTACATGTCAAAGTATTGCTGCAGGTGGGAGAGCCACATACCATCTGCCCGGGACTGCTaGTCCTGGATGATCATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QFSVYMSKYCCRWESHIPSARDC*SWMIMN Trigger: ATTCATGATCATCCAGGAGCAGCAGTCCCGGGCAGA...TGGTATGTGGCTCTCCCACCTGCAGCAATACTTTGACATGTAAACAGAAAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCTCACCTTCCCCGCAGGTGTACATTTATCTAGAGGTCTACAAAAACCATGGGTAGCTCTGATGTaGATGGCTGAAGATGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: WVLTFPAGVHLSRGLQKPWVALM*MAEDEP Trigger: AGGTTCATCTTCAGCCATCCACATCAGAGCTACCCA...TGGTTTTTGTAGACCTCTAGATAAATGTACACCTGCGGGGAAGGTGAGAACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGTCATGATTTGCCCATCACTGGAAGCAGTCCACCAGAAGATCAAGATTTGATTGCTTTCATCCTGTaGACGTTGGACCAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSHDLPITGSSPPEDQDLIAFIL*TLDQDL Trigger: CAGGTCCTGGTCCAACGTCCACAGGATGAAAGCAAT...CAAATCTTGATCTTCTGGTGGACTGCTTCCAGTGATGGGCAAATCATGACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | TCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGCTGCAGCTTCTGGCCTaGCACCAGCATAAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNLQNCIDTVFNPPKDVLLQLLA*HQHKAE Trigger: CTCAGCCTTATGCTGGTGCCAGGCCAGAAGCTGCAG...CAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | CAATTTTCTGTTTACATGTCAAAGTATTGCTGCAGGTGGGAGAGCCACATACCAGTAGGTGTCCACCTCTaGTTGGATGAAGGATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QFSVYMSKYCCRWESHIPVGVHL*LDEGST Trigger: GGTGGATCCTTCATCCAACCAGAGGTGGACACCTAC...TGGTATGTGGCTCTCCCACCTGCAGCAATACTTTGACATGTAAACAGAAAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | GAAATCCTGAGAGCTTTGGAAGCACAGCTGAAACAACACCCTGATTTTAGTTCAGCGGGGACAACAAACTaGCAGGTCATAAGCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EILRALEAQLKQHPDFSSAGTTN*QVISSS Trigger: AGATGAGCTTATGACCTGGCAGTTTGTTGTCCCCGC...TGAACTAAAATCAGGGTGTTGTTTCAGCTGTGCTTCCAAAGCTCTCAGGATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | TCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGAGCTCCACCTCCTGCTaGACCAATGACGACAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SNLQNCIDTVFNPPKDVLSSTSC*TNDDSQ Trigger: TTGGCTGTCGTCATTGGTGCAGCAGGAGGTGGAGCT...CAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | AATTCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCCAAAGTACAGGTCCTaGCCAGGGGTGGTGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NSNLQNCIDTVFNPPKDVPKYRS*PGVVLV Trigger: GACCAGCACCACCCCTGGCCAGGACCTGTACTTTGG...CACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTCAAGGAGGATTGGGAAACCCCTTATTGAGTAAGAGATACATACATGCACTTCTTGTTGAAAGCTaGGAGCATAGGCTCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSQGGLGNPLLSKRYIHALLVES*EHRLSV Trigger: CACTGAGAGCCTATGCTCCCAGCTTTCAACAAGAAG...TGCATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 72 bp | AAGCAGTCCACCAGAAGATCAAGATTTGATGGCACCTaGCAAAAGCTACTCTTCCTTCTAGCTGATTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQSTRRSRFDGT*QKLLFLLADWA Trigger: AGCCCAATCAGCTAGAAGGAAGAGTAGCTTTTGCAAGGTGCCATCAAATCTTGATCTTCTGGTGGACTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 72 bp | ATCCACCAAAGGATGTGCTGCAGTGATGGCATGAAATaGATACAGATGGCCACTGTCTGGTATGTGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IHQRMCCSDGMK*IQMATVWYVCV Trigger: TACACACACATACCAGACAGTGGCCATCTGTATCAATTTCATGCCATCACTGCAGCACATCCTTTGGTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGTCAAGGAGGATTGGGAAACCCCTTATTGAGTAAGAGATACATACATGCAGGGGCATCTGGGTATTaGCATTGCCATTATAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: GSQGGLGNPLLSKRYIHAGASGY*HCHYRY Trigger: GTATCTATAATGGCAATGTCAATACCCAGATGCCCC...TGCATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGTCATGATTTGCCCATCACTGGAAGCAGTCCACCAGAAGATCAAGATTTGCTATCAGGCCTTGCTTaGAGACTTCTTGTTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSHDLPITGSSPPEDQDLLSGLA*RLLVES Trigger: GCTTTCAACAAGAAGTCTCCAAGCAAGGCCTGATAG...CAAATCTTGATCTTCTGGTGGACTGCTTCCAGTGATGGGCAAATCATGACTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 72 bp | TTCTGCAGTGGGACAGCTATAGGCAGTCAAGGAGGATaGGGAAACCCCTTATTGAGTAAGAGATACATACAT | + |
|
Preference number: 4 (lower is better) Translates to: FCSGTAIGSQGG*GNPLLSKRYIH Trigger: ATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCCTATAGCTGTCCCACTGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | TCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGTTACAAGGCCTCTCTTaGGTATGCTGCTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNLQNCIDTVFNPPKDVLLQGLS*VCCCSF Trigger: GAAGCTGCAGCAGCATACGCAAGAGAGGCCTTGTAA...CAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | CAATTTTCTGTTTACATGTCAAAGTATTGCTGCAGGTGGGAGAGCCACATACCACTATTTTGCTTCACCTaGATCTTCTCGATGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFSVYMSKYCCRWESHIPLFCFT*IFSMEP Trigger: AGGCTCCATCGAGAAGATCCAGGTGAAGCAAAATAG...TGGTATGTGGCTCTCCCACCTGCAGCAATACTTTGACATGTAAACAGAAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | GATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTAATGACAGCATACACATaGGAGTCATTGTCTTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DVASKVSSLRIMNHTYFLMTAYT*ESLSFR Trigger: GCGAAAAGACAATGACTCCCATGTGTATGCTGTCAT...TAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CCA 90 bp | AATTCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGGTGACGCCACTTCTCTaGGGCAGAGCAATCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSNLQNCIDTVFNPPKDVVTPLL*GRAISD Trigger: ATCTGAGATTGCTCTGCCCCAGAGAAGTGGCGTCAC...CACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGAGAAGGTCCCAATTCTaGCCTCAGTGGCATCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: SNLQNCIDTVFNPPKDVLRRSQF*PQWHLY Trigger: ATATAGATGCCACTGAGGTCAGAATTGGGACCTTCT...CAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | AATTCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGTTCACCCTCAAATACTaGCTCGATGATGCACAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NSNLQNCIDTVFNPPKDVFTLKY*LDDAQA Trigger: CGCCTGTGCATCATCGAGTCAGTATTTGAGGGTGAA...CACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR GCA 90 bp | AATTCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGAAGAGCAAATCTAGCTaGTTGCCATTCATGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSNLQNCIDTVFNPPKDVKSKSS*LPFMGL Trigger: CAGCCCCATGAATGGCAAGCAGCTAGATTTGCTCTT...CACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| 3UTR CAA 72 bp | CAAGCTAGTTTGGGAATTCTAATCTCCAGAACTGTATaGATACAGTTTTCAATCCACCAAAGGATGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QASLGILISRTV*IQFSIHQRMCC Trigger: GCAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGAATTCCCAAACTAGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR TCA 90 bp | AATTCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGAAGCCAATGCTCTTATaGGCTCTAACATCCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NSNLQNCIDTVFNPPKDVKPMLL*ALTSQM Trigger: CATCTGGGATGTTAGAGCTCATAAGAGCATTGGCTT...CACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | GATGCTCACTGTGACGCCACTTCTCTGGGGCAGAGCAATCTCAGATaGTTCTGTCCCGCGCAGCAGGCGTGCTGTGCCCAGCAGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DAHCDATSLGQSNLR*FCPAQQACCAQQQG Trigger: GCCCTGCTGCTGGGCACAGCACGCCTGCTGCGCGGGACAGAAGCATCTGAGATTGCTCTGCCCCAGAGAAGTGGCGTCACAGTGAGCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | GCAGTCTCCCATGGGGCCCTGGAAGGGCCGGTAGGTGTCCACCTCTaGTTGGATGAAGGATCCACCCGAGTCCTGCAGCAAGTGCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: AVSHGALEGPVGVHL*LDEGSTRVLQQVPI Trigger: TATGGGCACTTGCTGCAGGACTCGGGTGGATCCTTCATCCAACCAGAGGTGGACACCTACCGGCCCTTCCAGGGCCCCATGGGAGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | ATGGCCACTGATGGAGTGAGTCACCCCGTCTGCACAGCTCTCGCCTaGTCCAATCTGCCTCAGTCGAGGGGTTGCGAACTGCAGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: MATDGVSHPVCTALA*SNLPQSRGCELQLQ Trigger: TTGGAGCTGCAGTTCGCAACCCCTCGACTGAGGCAGATTGGACCAGGCGAGAGCTGTGCAGACGGGGTGACTCACTCCATCAGTGGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | GCCCGGGACTGCTGCTCCTGGATGATCATGAATGCACGCCCTGACTaGCAGGCCAAGCCAGAACGCTCTTTCAAGACGGTCAGACAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARDCCSWMIMNARPD*QAKPERSFKTVRQA Trigger: GGCTTGTCTGACCGTCTTGAAAGAGCGTTCTGGCTTGGCCTGCCAGTCAGGGCGTGCATTCATGATCATCCAGGAGCAGCAGTCCCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 90 bp | CTCTGCCCGGGACTGCTGCTCCTGGATGATCATGAATGCACGCCCTaGCTGGCAGGCCAAGCCAGAACGCTCTTTCAAGACGGTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LCPGLLLLDDHECTP*LAGQARTLFQDGQT Trigger: TGTCTGACCGTCTTGAAAGAGCGTTCTGGCTTGGCCTGCCAGTCAGGGCGTGCATTCATGATCATCCAGGAGCAGCAGTCCCGGGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | CTCAGTGGCATCTATATGGCCACTGATGGAGTGAGTCACCCCGTCTaGACAGCTCTCGCCTGGTCCAATCTGCCTCAGTCGAGGGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGIYMATDGVSHPV*TALAWSNLPQSRGC Trigger: GCAACCCCTCGACTGAGGCAGATTGGACCAGGCGAGAGCTGTGCAGACGGGGTGACTCACTCCATCAGTGGCCATATAGATGCCACTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | CAGCCTTGCAGGGAGAGGTTGAAGTTCCCAGCCATGTTTCCTGGCTaGTTGTCCTCCAGCCTGAACACCTCTGGGTTGGTGGTGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPCRERLKFPAMFPG*LSSSLNTSGLVVEP Trigger: AGGCTCCACCACCAACCCAGAGGTGTTCAGGCTGGAGGACAAGCAGCCAGGAAACATGGCTGGGAACTTCAACCTCTCCCTGCAAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | CTGAGCAGAAGGAACCAAAGTACAGGTCCTGGCCAGGGGTGGTGCTaGTCACGTGGTACCCGAAGCTGGTGTTACAAGGCCTCTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSRRNQSTGPGQGWC*SRGTRSWCYKASLA Trigger: CGCAAGAGAGGCCTTGTAACACCAGCTTCGGGTACCACGTGACCAGCACCACCCCTGGCCAGGACCTGTACTTTGGTTCCTTCTGCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | ACGTGGTACCCGAAGCTGGTGTTACAAGGCCTCTCTTGCGTATGCTaGTGCAGCTTCTGGCCTGGCACCAGCATAAGGCTGAGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TWYPKLVLQGLSCVC*CSFWPGTSIRLSLS Trigger: GGACAAGCTCAGCCTTATGCTGGTGCCAGGCCAGAAGCTGCAGCAGCATACGCAAGAGAGGCCTTGTAACACCAGCTTCGGGTACCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | GTCACGTGGTACCCGAAGCTGGTGTTACAAGGCCTCTCTTGCGTATaGTGCTGCAGCTTCTGGCCTGGCACCAGCATAAGGCTGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTWYPKLVLQGLSCV*CCSFWPGTSIRLSL Trigger: CAAGCTCAGCCTTATGCTGGTGCCAGGCCAGAAGCTGCAGCAGCATACGCAAGAGAGGCCTTGTAACACCAGCTTCGGGTACCACGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | CTCCTGAGCAGAAGGAACCAAAGTACAGGTCCTGGCCAGGGGTGGTaGTGGTCACGTGGTACCCGAAGCTGGTGTTACAAGGCCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLSRRNQSTGPGQGW*WSRGTRSWCYKASL Trigger: AAGAGAGGCCTTGTAACACCAGCTTCGGGTACCACGTGACCAGCACCACCCCTGGCCAGGACCTGTACTTTGGTTCCTTCTGCTCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | CTGCGGTGGAACCAGGGCAGGTGTAAGGCCATTTTCACACCCTCTTaGATCTTGATCCGGGACACGGTGCCATTACTGCAGAAGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRWNQGRCKAIFTPS*ILIRDTVPLLQKVP Trigger: TGGGACCTTCTGCAGTAATGGCACCGTGTCCCGGATCAAGATGCAAGAGGGTGTGAAAATGGCCTTACACCTGCCCTGGTTCCACCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | TGGTACCCGAAGCTGGTGTTACAAGGCCTCTCTTGCGTATGCTGCTaGAGCTTCTGGCCTGGCACCAGCATAAGGCTGAGCTTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WYPKLVLQGLSCVCC*SFWPGTSIRLSLSL Trigger: CAAGGACAAGCTCAGCCTTATGCTGGTGCCAGGCCAGAAGCTGCAGCAGCATACGCAAGAGAGGCCTTGTAACACCAGCTTCGGGTACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGCCACAGCTGTCCCTGACCCTACCCTCACAGAGGGCCATCAGCACCTTCATTTTCACACCCTCTaGCATCTTGATCCGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: QGATAVPDPTLTEGHQHLHFHTL*HLDPGH Trigger: GTGTCCCGGATCAAGATGCAAGAGGGTGTGAAAATG...AAGGTGCTGATGGCCCTCTGTGAGGGTAGGGTCAGGGACAGCTGTGGCTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 90 bp | CACCGAGCTATTTTGCTTCACCTGGATCTTCTCGATGGAGCCTCCTaGGCAGAAGGAACCAAAGTACAGGTCCTGGCCAGGGGTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HRAILLHLDLLDGAS*AEGTKVQVLARGGA Trigger: AGCACCACCCCTGGCCAGGACCTGTACTTTGGTTCCTTCTGCTCAGGAGGCTCCATCGAGAAGATCCAGGTGAAGCAAAATAGCTCGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | GTCTGCACAGCTCTCGCCTGGTCCAATCTGCCTCAGTCGAGGGGTTaGGAACTGCAGCTCCAAGCCAATGCTCTTATGAGCTCTAACATC | + |
|
Preference number: 5 (lower is better) Translates to: VCTALAWSNLPQSRG*ELQLQANALMSSNI Trigger: GATGTTAGAGCTCATAAGAGCATTGGCTTGGAGCTGCAGTTCGCAACCCCTCGACTGAGGCAGATTGGACCAGGCGAGAGCTGTGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | TACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTACATTTGCCTCAGTCGAGGGGTaGCGAACTGCAGCTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: YMQILFWLGSHLPRRCTFASVEG*RTAAPS Trigger: GCTTGGAGCTGCAGTTCGCAACCCCTCGACTGAGGC...AAATGTACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTCTGAACACCTCTGGGTaGGTGGTGGAGCCTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CSLTLRDAHTFQPVDAVPLNTSG*VVEPGI Trigger: TATCCCAGGCTCCACCACCAACCCAGAGGTGTTCAG...AGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAGAGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 90 bp | CAGGAACAAACCTGCGGCCATGTTTTACTGGCCGTGGCTCTATGGTaGGCGACATGGTTCGCTCACGACTCAGGTCCACCATGTAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QEQTCGHVLLAVALW*ATWFAHDSGPPCRF Trigger: AAACCTACATGGTGGACCTGAGTCGTGAGCGAACCATGTCGCTCACCATAGAGCCACGGCCAGTAAAACATGGCCGCAGGTTTGTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | TCCACCTCTGGTTGGATGAAGGATCCACCCGAGTCCTGCAGCAAGTaGCCATACACCATGGTGTCTTCGATGACAGCATACACATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: STSGWMKDPPESCSK*PYTMVSSMTAYTWE Trigger: CTCCCATGTGTATGCTGTCATCGAAGACACCATGGTGTATGGGCACTTGCTGCAGGACTCGGGTGGATCCTTCATCCAACCAGAGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | CAGGCCAAGCCAGAACGCTCTTTCAAGACGGTCAGACAAGCCACTTaGTTGCTAGGCACACTGATGTTCCAAGACACTGAGGAGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QAKPERSFKTVRQAT*LLGTLMFQDTEERA Trigger: TGCCCTCTCCTCAGTGTCTTGGAACATCAGTGTGCCTAGCAACCAAGTGGCTTGTCTGACCGTCTTGAAAGAGCGTTCTGGCTTGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | CTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTGAAACATTCATCCTGTGGACGTaGGACCAGGACCTGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LTLRDAHTFQPVDAVPETFILWT*DQDLEL Trigger: CAGTTCCAGGTCCTGGTCCAACGTCCACAGGATGAA...TGTTTCAGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 90 bp | CACCCGAGTCCTGCAGCAAGTGCCCATACACCATGGTGTCTTCGATaGCAGCATACACATGGGAGTCATTGTCTTTTCGCCCTTTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HPSPAASAHTPWCLR*QHTHGSHCLFALSG Trigger: TCCCGAAAGGGCGAAAAGACAATGACTCCCATGTGTATGCTGTCATCGAAGACACCATGGTGTATGGGCACTTGCTGCAGGACTCGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | ATGCTGTCTAGACATGACGATGTAGCAGATTTTCACAGGAAGGGCTaGGTTCCCCAGCTTGATGCTCACTGTGACGCCACTTCTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MLSRHDDVADFHRKG*VPQLDAHCDATSLG Trigger: CCCCAGAGAAGTGGCGTCACAGTGAGCATCAAGCTGGGGAACCCAGCCCTTCCTGTGAAAATCTGCTACATCGTCATGTCTAGACAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | CTCTCAGTGTCACCGAGCTATTTTGCTTCACCTGGATCTTCTCGATaGAGCCTCCTGAGCAGAAGGAACCAAAGTACAGGTCCTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSVSPSYFASPGSSR*SLLSRRNQSTGPGQ Trigger: CTGGCCAGGACCTGTACTTTGGTTCCTTCTGCTCAGGAGGCTCCATCGAGAAGATCCAGGTGAAGCAAAATAGCTCGGTGACACTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | GGGGACGAGGAGATCTGTGATAAATTCTGCAGTGGGACAGCTATAGGCAGTCAAACACCCTCTTGCATCTaGATCCGGGACACGGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GDEEICDKFCSGTAIGSQTPSCI*IRDTVP Trigger: TGGCACCGTGTCCCGGATCAAGATGCAAGAGGGTGT...TTGACTGCCTATAGCTGTCCCACTGCAGAATTTATCACAGATCTCCTCGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | GATACATACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTTGGCTGACATCAGAGTaGCTGAGCCTTCACCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DTYMQILFWLGSHLPRRCWLTSE*LSLHPQ Trigger: TTGAGGGTGAAGGCTCAGCAACTCTGATGTCAGCCA...ACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTATGTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTTTGGAGACATTGAAGTaGAGGAAGGAGACACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSLTLRDAHTFQPVDAVPLETLK*RKETLA Trigger: GGCCAGTGTCTCCTTCCTCAACTTCAATGTCTCCAA...AGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAGAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCTTACCCTCAGAGATGCTCACACCTTCCAGCCAGTGGATGCTGTGCCTCACAGGAAGGAAATCTaGTGTATGGAGCCAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CSLTLRDAHTFQPVDAVPHRKEI*CMEPAV Trigger: GACAGCTGGCTCCATACACAAGATTTCCTTCCTGTG...AGGCACAGCATCCACTGGCTGGAAGGTGTGAGCATCTCTGAGGGTAAGAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | CACTATATAGTCCAGATTGGCCTCAAACTCACCAGGATATGCCTGCCTCTGTCTCCCTTTCGGGAACTTTaGGGTCTGGGGCATCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HYIVQIGLKLTRICLPLSPFREL*GLGHLG Trigger: ACCCAGATGCCCCAGACCCAAAAGTTCCCGAAAGGG...AGACAGAGGCAGGCATATCCTGGTGAGTTTGAGGCCAATCTGGACTATATAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 90 bp | TTGCCATTCATGGGGCTGCAATTGGAGATGTTAACCCAGAAGCTGTaGTGGTGGAAACTTGGCTTAGGCAGGACTTCCTCCTCCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPFMGLQLEMLTQKL*WWKLGLGRTSSSKL Trigger: CAGCTTGGAGGAGGAAGTCCTGCCTAAGCCAAGTTTCCACCATCACAGCTTCTGGGTTAACATCTCCAATTGCAGCCCCATGAATGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | ATAGATGACCGATTTGCAATACTGAAGCCTGAGACGTTCCTGCGGTaGAACCAGGGCAGGTGTAAGGCCATTTTCACACCCTCTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: IDDRFAILKPETFLR*NQGRCKAIFTPSCI Trigger: GATGCAAGAGGGTGTGAAAATGGCCTTACACCTGCCCTGGTTCCACCGCAGGAACGTCTCAGGCTTCAGTATTGCAAATCGGTCATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | GCTGCAATTGGAGATGTTAACCCAGAAGCTGTGATGGTGGAAACTTaGCTTAGGCAGGACTTCCTCCTCCAAGCTGAAGATCTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAIGDVNPEAVMVET*LRQDFLLQAEDLLC Trigger: GCAGAGGAGATCTTCAGCTTGGAGGAGGAAGTCCTGCCTAAGCCAAGTTTCCACCATCACAGCTTCTGGGTTAACATCTCCAATTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | TACATGCAGATACTCTTCTGGCTGGGTTCTCACCTTCCCCGCAGGTGTACATTTGTTACAAGGCCTCTCTaGCGTATGCTGCTGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YMQILFWLGSHLPRRCTFVTRPL*RMLLQL Trigger: AAGCTGCAGCAGCATACGCAAGAGAGGCCTTGTAAC...AAATGTACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTGCGTGGGCAAGATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACTACACATGGGAGTCATaGTCTTTTCGCCCTTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLRGQDVASKVSSLRIMNYTWES*SFRPFG Trigger: CCCGAAAGGGCGAAAAGACAATGACTCCCATGTGTA...GTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATCTTGCCCACGCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | AGCAAGTGCCCATACACCATGGTGTCTTCGATGACAGCATACACATaGGAGTCATTGTCTTTTCGCCCTTTCGGGAACTTTTGGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKCPYTMVSSMTAYT*ESLSFRPFGNFWVW Trigger: CCAGACCCAAAAGTTCCCGAAAGGGCGAAAAGACAATGACTCCCATGTGTATGCTGTCATCGAAGACACCATGGTGTATGGGCACTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCTCACCTTCCCCGCAGGTGTACATTTATCTAGAGGTCTACAAAAACCAATGTTTCCTGGCTGCTaGTCCTCCAGCCTGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: WVLTFPAGVHLSRGLQKPMFPGC*SSSLNT Trigger: GGTGTTCAGGCTGGAGGACAAGCAGCCAGGAAACAT...TGGTTTTTGTAGACCTCTAGATAAATGTACACCTGCGGGGAAGGTGAGAACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGTCAAGGAGGATTGGGAAACCCCTTATTGAGTAAGAGATACATACATGCAATCCTGGTCGCAGCCTaGCAGGGAGAGGTTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSQGGLGNPLLSKRYIHAILVAA*QGEVEV Trigger: AACTTCAACCTCTCCCTGCAAGGCTGCGACCAGGAT...TGCATGTATGTATCTCTTACTCAATAAGGGGTTTCCCAATCCTCCTTGACTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 90 bp | TGGATGGCTGAAGATGAACCTCCCCAAAAGGACACGGGCCTGACATaGAGTCAATATTCTTCTCGATCTTCAAGACAAAGTGCTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WMAEDEPPQKDTGLT*SQYSSRSSRQSASL Trigger: CAGAGAAGCACTTTGTCTTGAAGATCGAGAAGAATATTGACTGCATGTCAGGCCCGTGTCCTTTTGGGGAGGTTCATCTTCAGCCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 90 bp | TATAGGACACTATCAGGCCTTGCTTGGAGACTTCTTGTTGAAAGCTaGGAGCATAGGCTCTCAGTGTCACCGAGCTATTTTGCTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: YRTLSGLAWRLLVES*EHRLSVSPSYFASP Trigger: AGGTGAAGCAAAATAGCTCGGTGACACTGAGAGCCTATGCTCCCAGCTTTCAACAAGAAGTCTCCAAGCAAGGCCTGATAGTGTCCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTGCGTGGGCAAGATGTAGCATCCAAGGTCAGTTCCCTGAGAATCATGAACAAGTGCTTCTCTGGATaGCTGCAGCTAAAGGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RLRGQDVASKVSSLRIMNKCFSG*LQLKVK Trigger: TTTTACCTTTAGCTGCAGCAATCCAGAGAAGCACTT...GTTCATGATTCTCAGGGAACTGACCTTGGATGCTACATCTTGCCCACGCAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | GGGGACGAGGAGATCTGTGATAAATTCTGCAGTGGGACAGCTATAGGCAGTCAATCACAGTTGGAGACATaGAAGTTGAGGAAGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GDEEICDKFCSGTAIGSQSQLET*KLRKET Trigger: TGTCTCCTTCCTCAACTTCAATGTCTCCAACTGTGA...TTGACTGCCTATAGCTGTCCCACTGCAGAATTTATCACAGATCTCCTCGTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCTCACCTTCCCCGCAGGTGTACATTTATCTAGAGGTCTACAAAAACCAAGCAAATCTAGCTGCTaGCCATTCATGGGGCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WVLTFPAGVHLSRGLQKPSKSSC*PFMGLQ Trigger: TTGCAGCCCCATGAATGGCAAGCAGCTAGATTTGCT...TGGTTTTTGTAGACCTCTAGATAAATGTACACCTGCGGGGAAGGTGAGAACCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGAGGCTGAGCTTGTCCTaGGGCACCAGTAGCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNLQNCIDTVFNPPKDVLRLSLS*GTSSFQ Trigger: CTGGAAGCTACTGGTGCCCAAGGACAAGCTCAGCCT...CAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | GCATCCAAGGTCAGTTCCCTGAGAATCATGAACCACACGTATTTCCTAGAGAAGTGTCACCGAGCTATTTaGCTTCACCTGGATCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASKVSSLRIMNHTYFLEKCHRAI*LHLDLL Trigger: GAGAAGATCCAGGTGAAGCAAAATAGCTCGGTGACA...CTTCTCTAGGAAATACGTGTGGTTCATGATTCTCAGGGAACTGACCTTGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGAGCATAAGGCTGAGCTaGTCCTTGGGCACCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNLQNCIDTVFNPPKDVLSIRLS*SLGTSS Trigger: GCTACTGGTGCCCAAGGACAAGCTCAGCCTTATGCT...CAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | CAATTTTCTGTTTACATGTCAAAGTATTGCTGCAGGTGGGAGAGCCACATACCAGGACACTATCAGGCCTaGCTTGGAGACTTCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QFSVYMSKYCCRWESHIPGHYQA*LGDFLL Trigger: CAACAAGAAGTCTCCAAGCAAGGCCTGATAGTGTCC...TGGTATGTGGCTCTCCCACCTGCAGCAATACTTTGACATGTAAACAGAAAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATCTCCAGAACTGTATTGATACAGTTTTCAATCCACCAAAGGATGTGCTGCTTGGAGACTTCTTGTaGAAAGCTGGGAGCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SNLQNCIDTVFNPPKDVLLGDFL*KAGSIG Trigger: GCCTATGCTCCCAGCTTTCAACAAGAAGTCTCCAAG...CAGCACATCCTTTGGTGGATTGAAAACTGTATCAATACAGTTCTGGAGATTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | TCTCAGATGCTTCTGTCCCGCGCAGCAGGCGTGCTGTaGCCAGCAGCAGGGCCCCCAGCAGTGCGACTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SQMLLSRAAGVL*PAAGPPAVRLR Trigger: TCTCAGTCGCACTGCTGGGGGCCCTGCTGCTGGGCACAGCACGCCTGCTGCGCGGGACAGAAGCATCTGAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | GGGGCCCTGGAAGGGCCGGTAGGTGTCCACCTCTGGTaGGATGAAGGATCCACCCGAGTCCTGCAGCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GALEGPVGVHLW*DEGSTRVLQQV Trigger: CACTTGCTGCAGGACTCGGGTGGATCCTTCATCCAACCAGAGGTGGACACCTACCGGCCCTTCCAGGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | GTCACCCCGTCTGCACAGCTCTCGCCTGGTCCAATCTaGCTCAGTCGAGGGGTTGCGAACTGCAGCTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VTPSAQLSPGPI*LSRGVANCSSK Trigger: CTTGGAGCTGCAGTTCGCAACCCCTCGACTGAGGCAGATTGGACCAGGCGAGAGCTGTGCAGACGGGGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 72 bp | CCTGGAAGGGCCGGTAGGTGTCCACCTCTGGTTGGATaGAGGATCCACCCGAGTCCTGCAGCAAGTGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PGRAGRCPPLVG*RIHPSPAASAH Trigger: ATGGGCACTTGCTGCAGGACTCGGGTGGATCCTTCATCCAACCAGAGGTGGACACCTACCGGCCCTTCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | GATGGAGTGAGTCACCCCGTCTGCACAGCTCTCGCCTaGTCCAATCTGCCTCAGTCGAGGGGTTGCGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: DGVSHPVCTALA*SNLPQSRGCEL Trigger: CAGTTCGCAACCCCTCGACTGAGGCAGATTGGACCAGGCGAGAGCTGTGCAGACGGGGTGACTCACTCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | GGCCAGGGGTGGTGCTGGTCACGTGGTACCCGAAGCTaGTGTTACAAGGCCTCTCTTGCGTATGCTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GQGWCWSRGTRS*CYKASLAYAAA Trigger: TGCAGCAGCATACGCAAGAGAGGCCTTGTAACACCAGCTTCGGGTACCACGTGACCAGCACCACCCCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | CCTTGCAGGGAGAGGTTGAAGTTCCCAGCCATGTTTCCTGGCTGCTaGTCCTCCAGCCTGAACACCTCTGGGTTGGTGGTGGAGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PCRERLKFPAMFPGC*SSSLNTSGLVVEPG Trigger: CCCAGGCTCCACCACCAACCCAGAGGTGTTCAGGCTGGAGGACAAGCAGCCAGGAAACATGGCTGGGAACTTCAACCTCTCCCTGCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | AGGCCTCTCTTGCGTATGCTGCTGCAGCTTCTGGCCTaGCACCAGCATAAGGCTGAGCTTGTCCTTGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RPLLRMLLQLLA*HQHKAELVLGH Trigger: GTGCCCAAGGACAAGCTCAGCCTTATGCTGGTGCCAGGCCAGAAGCTGCAGCAGCATACGCAAGAGAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | AAGCTGAAGATCTCCTCTGCCCGGGACTGCTGCTCCTaGATGATCATGAATGCACGCCCTGACTGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KLKISSARDCCS*MIMNARPDWQA Trigger: GGCCTGCCAGTCAGGGCGTGCATTCATGATCATCCAGGAGCAGCAGTCCCGGGCAGAGGAGATCTTCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | CACGTGGTACCCGAAGCTGGTGTTACAAGGCCTCTCTaGCGTATGCTGCTGCAGCTTCTGGCCTGGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: HVVPEAGVTRPL*RMLLQLLAWHQ Trigger: CTGGTGCCAGGCCAGAAGCTGCAGCAGCATACGCAAGAGAGGCCTTGTAACACCAGCTTCGGGTACCACGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | CTGAAGCCGAAGGATTCCTGGGCTCTGGGCATCCTGGTCGCAGCCTaGCAGGGAGAGGTTGAAGTTCCCAGCCATGTTTCCTGGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LKPKDSWALGILVAA*QGEVEVPSHVSWLL Trigger: AAGCAGCCAGGAAACATGGCTGGGAACTTCAACCTCTCCCTGCAAGGCTGCGACCAGGATGCCCAGAGCCCAGGAATCCTTCGGCTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | GGTGCTGGTCACGTGGTACCCGAAGCTGGTGTTACAAGGCCTCTCTaGCGTATGCTGCTGCAGCTTCTGGCCTGGCACCAGCATAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GAGHVVPEAGVTRPL*RMLLQLLAWHQHKA Trigger: AGCCTTATGCTGGTGCCAGGCCAGAAGCTGCAGCAGCATACGCAAGAGAGGCCTTGTAACACCAGCTTCGGGTACCACGTGACCAGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | TGCTGCAGCTTCTGGCCTGGCACCAGCATAAGGCTGAGCTTGTCCTaGGGCACCAGTAGCTTCCAGGAGAAGTCATGCAGCTGTACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CCSFWPGTSIRLSLS*GTSSFQEKSCSCTG Trigger: GCCTGTACAGCTGCATGACTTCTCCTGGAAGCTACTGGTGCCCAAGGACAAGCTCAGCCTTATGCTGGTGCCAGGCCAGAAGCTGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 72 bp | CTTTCATCCTGTGGACGTTGGACCAGGACCTGGAACTaGAGCCGAAGGATTCCTGGGCTCTGGGCATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSCGRWTRTWN*SRRIPGLWASW Trigger: CCAGGATGCCCAGAGCCCAGGAATCCTTCGGCTTCAGTTCCAGGTCCTGGTCCAACGTCCACAGGATGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 72 bp | ACCTGCGGCCATGTTTTACTGGCCGTGGCTCTATGGTaGGCGACATGGTTCGCTCACGACTCAGGTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: TCGHVLLAVALW*ATWFAHDSGPP Trigger: TGGTGGACCTGAGTCGTGAGCGAACCATGTCGCTCACCATAGAGCCACGGCCAGTAAAACATGGCCGCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | GCTCTCGCCTGGTCCAATCTGCCTCAGTCGAGGGGTTaGGAACTGCAGCTCCAAGCCAATGCTCTTATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALAWSNLPQSRG*ELQLQANALMS Trigger: GCTCATAAGAGCATTGGCTTGGAGCTGCAGTTCGCAACCCCTCGACTGAGGCAGATTGGACCAGGCGAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | CCGAAGCTGGTGTTACAAGGCCTCTCTTGCGTATGCTaGTGCAGCTTCTGGCCTGGCACCAGCATAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PKLVLQGLSCVC*CSFWPGTSIRL Trigger: CAGCCTTATGCTGGTGCCAGGCCAGAAGCTGCAGCAGCATACGCAAGAGAGGCCTTGTAACACCAGCTTCGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | TTCCCCAGCTTGATGCTCACTGTGACGCCACTTCTCTaGGGCAGAGCAATCTCAGATGCTTCTGTCCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: FPSLMLTVTPLL*GRAISDASVPR Trigger: GCGCGGGACAGAAGCATCTGAGATTGCTCTGCCCCAGAGAAGTGGCGTCACAGTGAGCATCAAGCTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 72 bp | GGACTGCTGCTCCTGGATGATCATGAATGCACGCCCTaGCTGGCAGGCCAAGCCAGAACGCTCTTTCAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GLLLLDDHECTP*LAGQARTLFQD Trigger: GTCTTGAAAGAGCGTTCTGGCTTGGCCTGCCAGTCAGGGCGTGCATTCATGATCATCCAGGAGCAGCAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | ATCTATATGGCCACTGATGGAGTGAGTCACCCCGTCTaGACAGCTCTCGCCTGGTCCAATCTGCCTCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: IYMATDGVSHPV*TALAWSNLPQS Trigger: CGACTGAGGCAGATTGGACCAGGCGAGAGCTGTGCAGACGGGGTGACTCACTCCATCAGTGGCCATATAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | AGGGAGAGGTTGAAGTTCCCAGCCATGTTTCCTGGCTaGTTGTCCTCCAGCCTGAACACCTCTGGGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RERLKFPAMFPG*LSSSLNTSGLV Trigger: CACCAACCCAGAGGTGTTCAGGCTGGAGGACAAGCAGCCAGGAAACATGGCTGGGAACTTCAACCTCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | AAGCTGGTGTTACAAGGCCTCTCTTGCGTATGCTGCTaGAGCTTCTGGCCTGGCACCAGCATAAGGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KLVLQGLSCVCC*SFWPGTSIRLS Trigger: GCTCAGCCTTATGCTGGTGCCAGGCCAGAAGCTGCAGCAGCATACGCAAGAGAGGCCTTGTAACACCAGCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | TACCAGGGCAAACAGCAGCAGAGCTCCACCTCCTGCTaGACCAATGACGACAGCCAAATCTACAGTCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: YQGKQQQSSTSC*TNDDSQIYSPR Trigger: CCGAGGACTGTAGATTTGGCTGTCGTCATTGGTGCAGCAGGAGGTGGAGCTCTGCTGCTGTTTGCCCTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | TGCTGCTCCTGGATGATCATGAATGCACGCCCTGACTaGCAGGCCAAGCCAGAACGCTCTTTCAAGACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CCSWMIMNARPD*QAKPERSFKTV Trigger: GACCGTCTTGAAAGAGCGTTCTGGCTTGGCCTGCCAGTCAGGGCGTGCATTCATGATCATCCAGGAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | AGCTCTCGCCTGGTCCAATCTGCCTCAGTCGAGGGGTaGCGAACTGCAGCTCCAAGCCAATGCTCTTATGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSRLVQSASVEG*RTAAPSQCSYE Trigger: CTCATAAGAGCATTGGCTTGGAGCTGCAGTTCGCAACCCCTCGACTGAGGCAGATTGGACCAGGCGAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | GCCAAGCCAGAACGCTCTTTCAAGACGGTCAGACAAGCCACTTGGTaGCTAGGCACACTGATGTTCCAAGACACTGAGGAGAGGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AKPERSFKTVRQATW*LGTLMFQDTEERAG Trigger: GCCTGCCCTCTCCTCAGTGTCTTGGAACATCAGTGTGCCTAGCAACCAAGTGGCTTGTCTGACCGTCTTGAAAGAGCGTTCTGGCTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | GAGACACTGGCCCTTAGGTGTGCGGGGACAACAAACTaGCAGGTCATAAGCTCATCTTCAGGGAAGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ETLALRCAGTTN*QVISSSSGKPP Trigger: AGGAGGCTTCCCTGAAGATGAGCTTATGACCTGGCAGTTTGTTGTCCCCGCACACCTAAGGGCCAGTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | GAGTACCAGGGCAAACAGCAGCAGAGCTCCACCTCCTaGTGCACCAATGACGACAGCCAAATCTACAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EYQGKQQQSSTS*CTNDDSQIYSP Trigger: AGGACTGTAGATTTGGCTGTCGTCATTGGTGCAGCAGGAGGTGGAGCTCTGCTGCTGTTTGCCCTGGTACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | TCCACCTCTGGTTGGATGAAGGATCCACCCGAGTCCTaGAGCAAGTGCCCATACACCATGGTGTCTTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: STSGWMKDPPES*SKCPYTMVSSM Trigger: CATCGAAGACACCATGGTGTATGGGCACTTGCTGCAGGACTCGGGTGGATCCTTCATCCAACCAGAGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | CTCCAGCCTGAACACCTCTGGGTTGGTGGTGGAGCCTaGGATATAGTATTCAACGCGTTCCTCCTTCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQPEHLWVGGGA*DIVFNAFLLPL Trigger: GAGAGGAAGGAGGAACGCGTTGAATACTATATCCCAGGCTCCACCACCAACCCAGAGGTGTTCAGGCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 72 bp | GCAGGTGTAAGGCCATTTTCACACCCTCTTGCATCTTaGTCCGGGACACGGTGCCATTACTGCAGAAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGVRPFSHPLAS*SGTRCHYCRRS Trigger: GGACCTTCTGCAGTAATGGCACCGTGTCCCGGATCAAGATGCAAGAGGGTGTGAAAATGGCCTTACACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | AACCAGGGCAGGTGTAAGGCCATTTTCACACCCTCTTaGATCTTGATCCGGGACACGGTGCCATTACTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NQGRCKAIFTPS*ILIRDTVPLLQ Trigger: CTGCAGTAATGGCACCGTGTCCCGGATCAAGATGCAAGAGGGTGTGAAAATGGCCTTACACCTGCCCTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | GGTTGGATGAAGGATCCACCCGAGTCCTGCAGCAAGTaGCCATACACCATGGTGTCTTCGATGACAGCATAC | + |
|
Preference number: 6 (lower is better) Translates to: GWMKDPPESCSK*PYTMVSSMTAY Trigger: GTATGCTGTCATCGAAGACACCATGGTGTATGGGCACTTGCTGCAGGACTCGGGTGGATCCTTCATCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | CGATTTGCAATACTGAAGCCTGAGACGTTCCTGCGGTaGAACCAGGGCAGGTGTAAGGCCATTTTCACACCC | + |
|
Preference number: 6 (lower is better) Translates to: RFAILKPETFLR*NQGRCKAIFTP Trigger: GGGTGTGAAAATGGCCTTACACCTGCCCTGGTTCCACCGCAGGAACGTCTCAGGCTTCAGTATTGCAAATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | GGCAGGTGTAAGGCCATTTTCACACCCTCTTGCATCTaGATCCGGGACACGGTGCCATTACTGCAGAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GRCKAIFTPSCI*IRDTVPLLQKV Trigger: GACCTTCTGCAGTAATGGCACCGTGTCCCGGATCAAGATGCAAGAGGGTGTGAAAATGGCCTTACACCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | TGGAACCAGGGCAGGTGTAAGGCCATTTTCACACCCTCTTGCATCTaGATCCGGGACACGGTGCCATTACTGCAGAAGGTCCCAATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WNQGRCKAIFTPSCI*IRDTVPLLQKVPIL Trigger: CAGAATTGGGACCTTCTGCAGTAATGGCACCGTGTCCCGGATCAAGATGCAAGAGGGTGTGAAAATGGCCTTACACCTGCCCTGGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | AGACATGACGATGTAGCAGATTTTCACAGGAAGGGCTaGGTTCCCCAGCTTGATGCTCACTGTGACGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RHDDVADFHRKG*VPQLDAHCDAT Trigger: AGTGGCGTCACAGTGAGCATCAAGCTGGGGAACCCAGCCCTTCCTGTGAAAATCTGCTACATCGTCATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | TATTCAACGCGTTCCTCCTTCCTCTCACAGTTGGAGACATTGAAGTaGAGGAAGGAGACACTGGCCCTTAGGTGTGCGGGGACAACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: YSTRSSFLSQLETLK*RKETLALRCAGTTN Trigger: GTTTGTTGTCCCCGCACACCTAAGGGCCAGTGTCTCCTTCCTCAACTTCAATGTCTCCAACTGTGAGAGGAAGGAGGAACGCGTTGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | ACAGTCCTCGGGGTAAGAGTCACCCAGAAGAGCAAATCTAGCTGCTaGCCATTCATGGGGCTGCAATTGGAGATGTTAACCCAGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TVLGVRVTQKSKSSC*PFMGLQLEMLTQKL Trigger: CAGCTTCTGGGTTAACATCTCCAATTGCAGCCCCATGAATGGCAAGCAGCTAGATTTGCTCTTCTGGGTGACTCTTACCCCGAGGACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 72 bp | ATGGGGCTGCAATTGGAGATGTTAACCCAGAAGCTGTaGTGGTGGAAACTTGGCTTAGGCAGGACTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: MGLQLEMLTQKL*WWKLGLGRTSS Trigger: GGAGGAAGTCCTGCCTAAGCCAAGTTTCCACCATCACAGCTTCTGGGTTAACATCTCCAATTGCAGCCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | CCAGAACGCTCTTTCAAGACGGTCAGACAAGCCACTTaGTTGCTAGGCACACTGATGTTCCAAGACACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PERSFKTVRQAT*LLGTLMFQDTE Trigger: CTCAGTGTCTTGGAACATCAGTGTGCCTAGCAACCAAGTGGCTTGTCTGACCGTCTTGAAAGAGCGTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | GAACGCTCTTTCAAGACGGTCAGACAAGCCACTTGGTaGCTAGGCACACTGATGTTCCAAGACACTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ERSFKTVRQATW*LGTLMFQDTEE Trigger: CTCCTCAGTGTCTTGGAACATCAGTGTGCCTAGCAACCAAGTGGCTTGTCTGACCGTCTTGAAAGAGCGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 72 bp | CTTTCGGGAACTTTTGGGTCTGGGGCATCTGGGTATTaGCATTGCCATTATAGATACCCACAGCAGGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSGTFGSGASGY*HCHYRYPQQDP Trigger: AGGGTCCTGCTGTGGGTATCTATAATGGCAATGTCAATACCCAGATGCCCCAGACCCAAAAGTTCCCGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS GCA 72 bp | CTCGGGGTAAGAGTCACCCAGAAGAGCAAATCTAGCTaGTTGCCATTCATGGGGCTGCAATTGGAGATGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LGVRVTQKSKSS*LPFMGLQLEML Trigger: TAACATCTCCAATTGCAGCCCCATGAATGGCAAGCAGCTAGATTTGCTCTTCTGGGTGACTCTTACCCCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | GGAGATGTTAACCCAGAAGCTGTGATGGTGGAAACTTaGCTTAGGCAGGACTTCCTCCTCCAAGCTGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GDVNPEAVMVET*LRQDFLLQAED Trigger: ATCTTCAGCTTGGAGGAGGAAGTCCTGCCTAAGCCAAGTTTCCACCATCACAGCTTCTGGGTTAACATCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | CACCATGTAGGTTTTATTGCTTTCATCCTGTGGACGTaGGACCAGGACCTGGAACTGAAGCCGAAGGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: HHVGFIAFILWT*DQDLELKPKDS Trigger: GGAATCCTTCGGCTTCAGTTCCAGGTCCTGGTCCAACGTCCACAGGATGAAAGCAATAAAACCTACATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | GGGGTAAGAGTCACCCAGAAGAGCAAATCTAGCTGCTaGCCATTCATGGGGCTGCAATTGGAGATGTTAACC | + |
|
Preference number: 6 (lower is better) Translates to: GVRVTQKSKSSC*PFMGLQLEMLT Trigger: GGTTAACATCTCCAATTGCAGCCCCATGAATGGCAAGCAGCTAGATTTGCTCTTCTGGGTGACTCTTACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | GCTGAGCCTTCACCCTCAAATACTGACTCGATGATGCACAGGCGTTaGATAGATGACCGATTTGCAATACTGAAGCCTGAGACGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AEPSPSNTDSMMHRR*IDDRFAILKPETFL Trigger: CAGGAACGTCTCAGGCTTCAGTATTGCAAATCGGTCATCTATCAAACGCCTGTGCATCATCGAGTCAGTATTTGAGGGTGAAGGCTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 72 bp | TGGCTGAAGATGAACCTCCCCAAAAGGACACGGGCCTaGCATGCAGTCAATATTCTTCTCGATCTTCAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: WLKMNLPKRTRA*HAVNILLDLQD Trigger: GTCTTGAAGATCGAGAAGAATATTGACTGCATGTCAGGCCCGTGTCCTTTTGGGGAGGTTCATCTTCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS TCA 72 bp | GGAAGGAAATCTTGTGTATGGAGCCAGCTGTCAGGGTaGCATTGGTACTACAAGTCCGAGACTCTAGACACA | + |
|
Preference number: 6 (lower is better) Translates to: GRKSCVWSQLSG*HWYYKSETLDT Trigger: TGTGTCTAGAGTCTCGGACTTGTAGTACCAATGTCACCCTGACAGCTGGCTCCATACACAAGATTTCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | CTATCAGGCCTTGCTTGGAGACTTCTTGTTGAAAGCTaGGAGCATAGGCTCTCAGTGTCACCGAGCTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSGLAWRLLVES*EHRLSVSPSYF Trigger: AAAATAGCTCGGTGACACTGAGAGCCTATGCTCCCAGCTTTCAACAAGAAGTCTCCAAGCAAGGCCTGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | GAAATCTTGTGTATGGAGCCAGCTGTCAGGGTGACATaGGTACTACAAGTCCGAGACTCTAGACACACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EILCMEPAVRVT*VLQVRDSRHTK Trigger: CTTCGTGTGTCTAGAGTCTCGGACTTGTAGTACCAATGTCACCCTGACAGCTGGCTCCATACACAAGATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | ATGGGAGTCATTGTCTTTTCGCCCTTTCGGGAACTTTaGGGTCTGGGGCATCTGGGTATTGACATTGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: MGVIVFSPFREL*GLGHLGIDIAI Trigger: AATGGCAATGTCAATACCCAGATGCCCCAGACCCAAAAGTTCCCGAAAGGGCGAAAAGACAATGACTCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | ATACGGTGTATAGGACACTATCAGGCCTTGCTTGGAGACTTCTTGTaGAAAGCTGGGAGCATAGGCTCTCAGTGTCACCGAGCTATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IRCIGHYQALLGDFL*KAGSIGSQCHRAIL Trigger: CAAAATAGCTCGGTGACACTGAGAGCCTATGCTCCCAGCTTTCAACAAGAAGTCTCCAAGCAAGGCCTGATAGTGTCCTATACACCGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | GATGCCTTCCTCTTTGAAATACGGTGTATAGGACACTATCAGGCCTaGCTTGGAGACTTCTTGTTGAAAGCTGGGAGCATAGGCTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DAFLFEIRCIGHYQA*LGDFLLKAGSIGSQ Trigger: CTGAGAGCCTATGCTCCCAGCTTTCAACAAGAAGTCTCCAAGCAAGGCCTGATAGTGTCCTATACACCGTATTTCAAAGAGGAAGGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 90 bp | AGCATACACATGGGAGTCATTGTCTTTTCGCCCTTTCGGGAACTTTaGGGTCTGGGGCATCTGGGTATTGACATTGCCATTATAGATACC | + |
|
Preference number: 6 (lower is better) Translates to: SIHMGVIVFSPFREL*GLGHLGIDIAIIDT Trigger: GGTATCTATAATGGCAATGTCAATACCCAGATGCCCCAGACCCAAAAGTTCCCGAAAGGGCGAAAAGACAATGACTCCCATGTGTATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CCA 72 bp | CCATACACCATGGTGTCTTCGATGACAGCATACACATaGGAGTCATTGTCTTTTCGCCCTTTCGGGAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: PYTMVSSMTAYT*ESLSFRPFGNF Trigger: AAAGTTCCCGAAAGGGCGAAAAGACAATGACTCCCATGTGTATGCTGTCATCGAAGACACCATGGTGTATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | TCACCCTCAAATACTGACTCGATGATGCACAGGCGTTaGATAGATGACCGATTTGCAATACTGAAGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SPSNTDSMMHRR*IDDRFAILKPE Trigger: CTCAGGCTTCAGTATTGCAAATCGGTCATCTATCAAACGCCTGTGCATCATCGAGTCAGTATTTGAGGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||
| CDS CAA 72 bp | CTCTTTGAAATACGGTGTATAGGACACTATCAGGCCTaGCTTGGAGACTTCTTGTTGAAAGCTGGGAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: LFEIRCIGHYQA*LGDFLLKAGSI Trigger: TATGCTCCCAGCTTTCAACAAGAAGTCTCCAAGCAAGGCCTGATAGTGTCCTATACACCGTATTTCAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039229.8 |
||