Pregenerated sensors for CDCA7L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021175Ensembl transcript IDs: ENSMUST00000021592.16, ENSMUST00000176735.8, ENSMUST00000177339.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGCATGCCAGTTACACAACTGTTGTCTCTGCCACAGGTGCCAGGTaGGACATCCAGTCAGGAGCCCTTGTTGATGCCCGCCTTAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: PHASYTTVVSATGAR*DIQSGALVDARLKE Trigger: CTCCTTAAGGCGGGCATCAACAAGGGCTCCTGACTGGATGTCCCACCTGGCACCTGTGGCAGAGACAACAGTTGTGTAACTGGCATGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR CCA 90 bp | GGGTACTGGCAGGTGTGGCTCTACTGCTGGAAGCATGAACGGCCTTaGTTTTACAGCTCACGTCCCTCCAGCTTCAGCCAGACACAGCAA | + |
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Preference number: 1 (lower is better) Translates to: GYWQVWLYCWKHERP*FYSSRPSSFSQTQQ Trigger: TTGCTGTGTCTGGCTGAAGCTGGAGGGACGTGAGCTGTAAAACCAAGGCCGTTCATGCTTCCAGCAGTAGAGCCACACCTGCCAGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR CCA 90 bp | AGAAAACAAGCGTCTAAGGCTGGCACAAAGAGCAGACTCGTCTCGTaGGACTCCGCCTGGTTAAGTTCGAGCGATCCCTCTCCTCTCGAC | + |
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Preference number: 1 (lower is better) Translates to: RKQASKAGTKSRLVS*DSAWLSSSDPSPLD Trigger: GTCGAGAGGAGAGGGATCGCTCGAACTTAACCAGGCGGAGTCCCACGAGACGAGTCTGCTCTTTGTGCCAGCCTTAGACGCTTGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR GCA 90 bp | ATCAGGTTTGAGCTATGGTCACTCAGGAGGCAAAGCAACAGCCTCTaGAGGAAGGGAGTGACCGTGGGGGAACTGAGTATCAAAGGCGAG | + |
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Preference number: 1 (lower is better) Translates to: IRFELWSLRRQSNSL*RKGVTVGELSIKGE Trigger: CTCGCCTTTGATACTCAGTTCCCCCACGGTCACTCCCTTCCTGCAGAGGCTGTTGCTTTGCCTCCTGAGTGACCATAGCTCAAACCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR GCA 90 bp | TGGAACATTTATTGCATGGAACAATTAAGAGCATCAGAACCCGCATaGCAGTTACACAACTGTTGTCTCTGCCACAGGTGCCAGGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: WNIYCMEQLRASEPA*QLHNCCLCHRCQVG Trigger: TCCCACCTGGCACCTGTGGCAGAGACAACAGTTGTGTAACTGGCATGCGGGTTCTGATGCTCTTAATTGTTCCATGCAATAAATGTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR TCA 90 bp | AATGACCCAGAATTTAATATCCAGAGCAGGATAAACTATCAGGTTTaGGCTATGGTCACTCAGGAGGCAAAGCAACAGCCTCTGCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: NDPEFNIQSRINYQV*AMVTQEAKQQPLQE Trigger: TTCCTGCAGAGGCTGTTGCTTTGCCTCCTGAGTGACCATAGCTCAAACCTGATAGTTTATCCTGCTCTGGATATTAAATTCTGGGTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR-3UTR CCA 90 bp | GAGAATTATTCTTTGAGGAGGGCGAGTAATCACAGTACACAAGGACCAAACACTAGGTCTATGCAGGTATaGATACAGATTTCTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: ENYSLRRASNHSTQGPNTRSMQV*IQISLL Trigger: AAGCAGAGAAATCTGTATCCATACCTGCATAGACCT...AGTGTTTGGTCCTTGTGTACTGTGATTACTCGCCCTCCTCAAAGAATAATTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR CAA 90 bp | GCCAGACACAGCAAGGATGTTTTAGTAACAGGGGTATACATTCTTTaGTTAGAGAATTATTCTTTGAGGAGGGCGAGTAATCACAGTACA | + |
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Preference number: 2 (lower is better) Translates to: ARHSKDVLVTGVYIL*LENYSLRRASNHST Trigger: TGTACTGTGATTACTCGCCCTCCTCAAAGAATAATTCTCTAACAAAAGAATGTATACCCCTGTTACTAAAACATCCTTGCTGTGTCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR-3UTR GCA 90 bp | AGCTTCAGCCAGACACAGCAAGGATGTTTTAGTAACAGGGGTATACATTCTTTTGGATACAGATTTCTCTaGTTTACTATATTTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SFSQTQQGCFSNRGIHSFGYRFL*FTIFPE Trigger: CTCAGGAAATATAGTAAAGCAGAGAAATCTGTATCC...AAAAGAATGTATACCCCTGTTACTAAAACATCCTTGCTGTGTCTGGCTGAAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR CCA 72 bp | GCGTCTAAGGCTGGCACAAAGAGCAGACTCGTCTCGTaGGACTCCGCCTGGTTAAGTTCGAGCGATCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: ASKAGTKSRLVS*DSAWLSSSDPS Trigger: AGAGGGATCGCTCGAACTTAACCAGGCGGAGTCCCACGAGACGAGTCTGCTCTTTGTGCCAGCCTTAGACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR GCA 72 bp | GAGCTATGGTCACTCAGGAGGCAAAGCAACAGCCTCTaGAGGAAGGGAGTGACCGTGGGGGAACTGAGTATC | + |
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Preference number: 3 (lower is better) Translates to: ELWSLRRQSNSL*RKGVTVGELSI Trigger: GATACTCAGTTCCCCCACGGTCACTCCCTTCCTGCAGAGGCTGTTGCTTTGCCTCCTGAGTGACCATAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR GCA 72 bp | TCAGAACCCGCATGCCAGTTACACAACTGTTGTCTCTaGCACAGGTGCCAGGTGGGACATCCAGTCAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: SEPACQLHNCCL*HRCQVGHPVRS Trigger: GCTCCTGACTGGATGTCCCACCTGGCACCTGTGGCAGAGACAACAGTTGTGTAACTGGCATGCGGGTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR CCA 72 bp | CAGGTGTGGCTCTACTGCTGGAAGCATGAACGGCCTTaGTTTTACAGCTCACGTCCCTCCAGCTTCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: QVWLYCWKHERP*FYSSRPSSFSQ Trigger: CTGGCTGAAGCTGGAGGGACGTGAGCTGTAAAACCAAGGCCGTTCATGCTTCCAGCAGTAGAGCCACACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR CCA 72 bp | AGTTACACAACTGTTGTCTCTGCCACAGGTGCCAGGTaGGACATCCAGTCAGGAGCCCTTGTTGATGCCCGC | + |
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Preference number: 3 (lower is better) Translates to: SYTTVVSATGAR*DIQSGALVDAR Trigger: GCGGGCATCAACAAGGGCTCCTGACTGGATGTCCCACCTGGCACCTGTGGCAGAGACAACAGTTGTGTAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGTGGGACATCCAGTCAGGAGCCCTTGTTGATGCCCGCCTTAAGGAGTTAGATAAACTATCAGGTTaGAGCTATGGTCACTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: ARWDIQSGALVDARLKELDKLSG*SYGHSG Trigger: TCCTGAGTGACCATAGCTCAAACCTGATAGTTTATC...TAACTCCTTAAGGCGGGCATCAACAAGGGCTCCTGACTGGATGTCCCACCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR GCA 72 bp | TATTGCATGGAACAATTAAGAGCATCAGAACCCGCATaGCAGTTACACAACTGTTGTCTCTGCCACAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: YCMEQLRASEPA*QLHNCCLCHRC Trigger: GCACCTGTGGCAGAGACAACAGTTGTGTAACTGGCATGCGGGTTCTGATGCTCTTAATTGTTCCATGCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR-3UTR CAA 90 bp | TATTGCATGGAACAATTAAGAGCATCAGAACCCGCATGCCAGTTACACAACTGTCTCTTCAGCAGACACTaGTCACAATACAGGTCTATG | + |
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Preference number: 3 (lower is better) Translates to: YCMEQLRASEPACQLHNCLFSRH*SQYRSM Trigger: CATAGACCTGTATTGTGACAAGTGTCTGCTGAAGAG...ACAGTTGTGTAACTGGCATGCGGGTTCTGATGCTCTTAATTGTTCCATGCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR TCA 72 bp | GAATTTAATATCCAGAGCAGGATAAACTATCAGGTTTaGGCTATGGTCACTCAGGAGGCAAAGCAACAGCCT | + |
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Preference number: 3 (lower is better) Translates to: EFNIQSRINYQV*AMVTQEAKQQP Trigger: AGGCTGTTGCTTTGCCTCCTGAGTGACCATAGCTCAAACCTGATAGTTTATCCTGCTCTGGATATTAAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR-3UTR CAA 90 bp | TATTGCATGGAACAATTAAGAGCATCAGAACCCGCATGCCAGTTACACAACTGTAGGGATGAATACTTATaGATTTTAGCTTCCCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: YCMEQLRASEPACQLHNCRDEYL*ILASPN Trigger: GTTGGGGGAAGCTAAAATCAATAAGTATTCATCCCT...ACAGTTGTGTAACTGGCATGCGGGTTCTGATGCTCTTAATTGTTCCATGCAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR GCA 72 bp | AACTCTTCAGCAGACACTTGTCACAATACAGGTCTATaGAGGTATGGATACAGATTTCTCTGCTTTACTATA | + |
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Preference number: 3 (lower is better) Translates to: NSSADTCHNTGL*RYGYRFLCFTI Trigger: TATAGTAAAGCAGAGAAATCTGTATCCATACCTGCATAGACCTGTATTGTGACAAGTGTCTGCTGAAGAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR CCA 72 bp | TCAAAACACCATGGCTTATCTTGTATCCCTAAGACTTaGAAACAATGCAGTGAGTGTTCTATAAAAAGCATA | + |
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Preference number: 3 (lower is better) Translates to: SKHHGLSCIPKT*KQCSECSIKSI Trigger: TATGCTTTTTATAGAACACTCACTGCATTGTTTCCAAGTCTTAGGGATACAAGATAAGCCATGGTGTTTTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | AACTGTTGTCTCTGCCACAGGTGCCAGGTGGGACATCCAGTCAGGAGCCCTTGTGTCTTCTGCCGGCACTaGTGGCACGTGTTACCAAGC | + |
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Preference number: 4 (lower is better) Translates to: NCCLCHRCQVGHPVRSPCVFCRH*WHVLPS Trigger: GCTTGGTAACACGTGCCATCAGTGCCGGCAGAAGAC...ACAAGGGCTCCTGACTGGATGTCCCACCTGGCACCTGTGGCAGAGACAACAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | TGGGACATCCAGTCAGGAGCCCTTGTTGATGCCCGCCTTAAGGAGTTAACGTCCGGTTCATGCGCCGTGTaGTCTGTCCCTCTGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: WDIQSGALVDARLKELTSGSCAV*SVPLRR Trigger: CCTTCTCAGAGGGACAGATCACACGGCGCATGAACC...GGACGTTAACTCCTTAAGGCGGGCATCAACAAGGGCTCCTGACTGGATGTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR GCA 90 bp | GCCAGGTGGGACATCCAGTCAGGAGCCCTTGTTGATGCCCGCCTTAAGGAGTTAGGCAGTAACTGCAATTaGAGATGCCACGGCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: ARWDIQSGALVDARLKELGSNCN*RCHGRE Trigger: CTCCCTGCCGTGGCATCTGCAATTGCAGTTACTGCC...TAACTCCTTAAGGCGGGCATCAACAAGGGCTCCTGACTGGATGTCCCACCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR GCA 90 bp | AGAACCCGCATGCCAGTTACACAACTGTTGTCTCTGCCACAGGTGCCAGGTGGGAACTGCAATTGCAGATaGCACGGCAGGGAGGACATG | + |
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Preference number: 4 (lower is better) Translates to: RTRMPVTQLLSLPQVPGGNCNCR*HGREDM Trigger: CATGTCCTCCCTGCCGTGGCATCTGCAATTGCAGTT...CCCACCTGGCACCTGTGGCAGAGACAACAGTTGTGTAACTGGCATGCGGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CCA 90 bp | ACCCGCATGCCAGTTACACAACTGTTGTCTCTGCCACAGGTGCCAGGTGGGACATCCGACAGACCGTCTTaGTATCGATGGTCTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TRMPVTQLLSLPQVPGGTSDRPS*YRWSSA Trigger: GGCAGAAGACCATCGATACCAAGACGGTCTGTCGGA...TGTCCCACCTGGCACCTGTGGCAGAGACAACAGTTGTGTAACTGGCATGCGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | ATGAACGGCCTTGGTTTTACAGCTCACGTCCCTCCAGCTTCAGCCAGACACAGCTTTTTGGTGGGGAACTaGAAGGCTACCCGAAGACCG | + |
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Preference number: 4 (lower is better) Translates to: MNGLGFTAHVPPASARHSFLVGN*KATRRP Trigger: CGGTCTTCGGGTAGCCTTTCAGTTCCCCACCAAAAA...GCTGTGTCTGGCTGAAGCTGGAGGGACGTGAGCTGTAAAACCAAGGCCGTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | GCCAGGTGGGACATCCAGTCAGGAGCCCTTGTTGATGCCCGCCTTAAGGAGTTAAGTAAGCTTGGTGGCTaGGAAGGTGAAGTTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ARWDIQSGALVDARLKELSKLGG*EGEVLQ Trigger: CTGGAGAACTTCACCTTCTCAGCCACCAAGCTTACT...TAACTCCTTAAGGCGGGCATCAACAAGGGCTCCTGACTGGATGTCCCACCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR CAA 72 bp | AAGAGCATCAGAACCCGCATGCCAGTTACACAACTGTaGTCTCTGCCACAGGTGCCAGGTGGGACATCCAGT | + |
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Preference number: 4 (lower is better) Translates to: KSIRTRMPVTQL*SLPQVPGGTSS Trigger: ACTGGATGTCCCACCTGGCACCTGTGGCAGAGACAACAGTTGTGTAACTGGCATGCGGGTTCTGATGCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR GCA 90 bp | AACTGTTGTCTCTGCCACAGGTGCCAGGTGGGACATCCAGTCAGGAGCCCTTGTCTCTCTGACAGGTTTTaGATGGGAACATCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NCCLCHRCQVGHPVRSPCLSDRF*MGTSSW Trigger: CCAGGATGATGTTCCCATGCAAAACCTGTCAGAGAG...ACAAGGGCTCCTGACTGGATGTCCCACCTGGCACCTGTGGCAGAGACAACAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | ATCAGAACCCGCATGCCAGTTACACAACTGTTGTCTCTGCCACAGGTGCCAGGTACTACCACAGCTCTCTaGCAGGTTTTGCATGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: IRTRMPVTQLLSLPQVPGTTTAL*QVLHGN Trigger: GTTCCCATGCAAAACCTGTCAGAGAGCTGTGGTAGT...ACCTGGCACCTGTGGCAGAGACAACAGTTGTGTAACTGGCATGCGGGTTCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CCA 90 bp | AGAACCCGCATGCCAGTTACACAACTGTTGTCTCTGCCACAGGTGCCAGGTGGGATGGGAACATCATCCTaGAAACCCACAAACTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RTRMPVTQLLSLPQVPGGMGTSS*KPTNSS Trigger: TGAAGAGTTTGTGGGTTTCCAGGATGATGTTCCCAT...CCCACCTGGCACCTGTGGCAGAGACAACAGTTGTGTAACTGGCATGCGGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR GCA 90 bp | CCCCACTCAAACTGTGCTTTTAACTCTTCAGCAGACACTTGTCACAATACAGGTCTTTTCAGGGGGTCGTaGACTCCGGGTTGGGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PHSNCAFNSSADTCHNTGLFRGS*TPGWVH Trigger: ATGAACCCAACCCGGAGTGCACGACCCCCTGAAAAG...ACCTGTATTGTGACAAGTGTCTGCTGAAGAGTTAAAAGCACAGTTTGAGTGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CCA 90 bp | GAGAATTATTCTTTGAGGAGGGCGAGTAATCACAGTACACAAGGACCAAACACTTGTCAGCTACTTCTTTaGGGATCTGGGAGCGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: ENYSLRRASNHSTQGPNTCQLLL*GSGSAW Trigger: CCACGCGCTCCCAGATCCCCAAAGAAGTAGCTGACA...AGTGTTTGGTCCTTGTGTACTGTGATTACTCGCCCTCCTCAAAGAATAATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | ATCAGGTTTGAGCTATGGTCACTCAGGAGGCAAAGCAACAGCCTCTGCAGGAAGAAAATCTTCCATTTCTaGGTCCGTGTCCTCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: IRFELWSLRRQSNSLCRKKIFHF*VRVLFE Trigger: TTCAAAGAGGACACGGACTCAGAAATGGAAGATTTT...CTTCCTGCAGAGGCTGTTGCTTTGCCTCCTGAGTGACCATAGCTCAAACCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | TATTGCATGGAACAATTAAGAGCATCAGAACCCGCATGCCAGTTACACAACTGTCCAAGTCTTCCTCAGTaGTGTCTTTCACTGAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: YCMEQLRASEPACQLHNCPSLPQ*CLSLSG Trigger: TCCGCTCAGTGAAAGACATCACTGAGGAAGACTTGG...ACAGTTGTGTAACTGGCATGCGGGTTCTGATGCTCTTAATTGTTCCATGCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CCA 90 bp | TATTGCATGGAACAATTAAGAGCATCAGAACCCGCATGCCAGTTACACAACTGTGCATCCGAATTCTCTTaGCTCTCAGCTCTGGACTCA | + |
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Preference number: 4 (lower is better) Translates to: YCMEQLRASEPACQLHNCASEFS*LSALDS Trigger: TGAGTCCAGAGCTGAGAGCCAAGAGAATTCGGATGC...ACAGTTGTGTAACTGGCATGCGGGTTCTGATGCTCTTAATTGTTCCATGCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CCA 90 bp | CAATACAGGTCTATGCAGGTATGGATACAGATTTCTCTGCTTTACTATATTTCCTCGTGCACTCCGGGTTaGGTTCATGCGCCGTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: QYRSMQVWIQISLLYYISSCTPG*VHAPCD Trigger: ATCACACGGCGCATGAACCCAACCCGGAGTGCACGA...GGAAATATAGTAAAGCAGAGAAATCTGTATCCATACCTGCATAGACCTGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR GCA 90 bp | GAGGCCTCCAGTGTCTGTTTCTATTGTCTCTTAATAAAAAGGACACCTTACTCACGGAAGCACACATTCTaGTGTTTCTCCAACTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: EASSVCFYCLLIKRTPYSRKHTF*CFSNSR Trigger: ACGGGAGTTGGAGAAACAGCAGAATGTGTGCTTCCG...TGAGTAAGGTGTCCTTTTTATTAAGAGACAATAGAAACAGACACTGGAGGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CCA 90 bp | TTTAACTCTTCAGCAGACACTTGTCACAATACAGGTCTATGCAGGTATGGATACCGACTCCATGAGCTCTaGGTTACTGCTCATGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: FNSSADTCHNTGLCRYGYRLHEL*VTAHVQ Trigger: CTGAACATGAGCAGTAACCCAGAGCTCATGGAGTCG...GTATCCATACCTGCATAGACCTGTATTGTGACAAGTGTCTGCTGAAGAGTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | AGTAACAGGGGTATACATTCTTTTGTTAGAGAATTATTCTTTGAGGAGGGCGAGTTTCTCCAACTCCCGTaGGTCCAAACTACCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SNRGIHSFVRELFFEEGEFLQLP*VQTTTA Trigger: AGCTGTGGTAGTTTGGACTCACGGGAGTTGGAGAAA...CTCGCCCTCCTCAAAGAATAATTCTCTAACAAAAGAATGTATACCCCTGTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | AGTAACAGGGGTATACATTCTTTTGTTAGAGAATTATTCTTTGAGGAGGGCGAGTGGTGGCTGAGAAGGTaGAGTTCTCCAGAGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: SNRGIHSFVRELFFEEGEWWLRR*SSPEQT Trigger: AGTTTGCTCTGGAGAACTTCACCTTCTCAGCCACCA...CTCGCCCTCCTCAAAGAATAATTCTCTAACAAAAGAATGTATACCCCTGTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CCA 90 bp | TGTCACAATACAGGTCTATGCAGGTATGGATACAGATTTCTCTGCTTTACTATACCGTCTTGGTATCGATaGTCTTCTGCCGGCACTGAT | + |
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Preference number: 4 (lower is better) Translates to: CHNTGLCRYGYRFLCFTIPSWYR*SSAGTD Trigger: ATCAGTGCCGGCAGAAGACCATCGATACCAAGACGG...TATAGTAAAGCAGAGAAATCTGTATCCATACCTGCATAGACCTGTATTGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | GAGAATTATTCTTTGAGGAGGGCGAGTAATCACAGTACACAAGGACCAAACACTTTCTTAGTTCTTCTGTaGAGTATTTGGAACGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: ENYSLRRASNHSTQGPNTFLVLL*SIWNGS Trigger: GCTTCCGTTCCAAATACTTCACAGAAGAACTAAGAA...AGTGTTTGGTCCTTGTGTACTGTGATTACTCGCCCTCCTCAAAGAATAATTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | TGTCACAATACAGGTCTATGCAGGTATGGATACAGATTTCTCTGCTTTACTATAAATTCCGCCAACAACTaGGCAAGCATAGCCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: CHNTGLCRYGYRFLCFTINSANN*ASIALF Trigger: GAACAAGGCTATGCTTGCTCAGTTGTTGGCGGAATT...TATAGTAAAGCAGAGAAATCTGTATCCATACCTGCATAGACCTGTATTGTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CCA 90 bp | AGTAACAGGGGTATACATTCTTTTGTTAGAGAATTATTCTTTGAGGAGGGCGAGAACAGGGAAGAAATCTaGCACCGAATTCAATTCCGC | + |
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Preference number: 4 (lower is better) Translates to: SNRGIHSFVRELFFEEGENREEI*HRIQFR Trigger: GCGGAATTGAATTCGGTGCCAGATTTCTTCCCTGTT...CTCGCCCTCCTCAAAGAATAATTCTCTAACAAAAGAATGTATACCCCTGTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR TCA 90 bp | AGCTTCAGCCAGACACAGCAAGGATGTTTTAGTAACAGGGGTATACATTCTTTTAGTCCGTGTCCTCTTTaGAAATCCTTCTTAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SFSQTQQGCFSNRGIHSFSPCPL*KSFLVL Trigger: AAGAACTAAGAAGGATTTTCAAAGAGGACACGGACT...AAAAGAATGTATACCCCTGTTACTAAAACATCCTTGCTGTGTCTGGCTGAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CCA 90 bp | TGTCACAATACAGGTCTATGCAGGTATGGATACAGATTTCTCTGCTTTACTATACTGACAGGTTTTGCATaGGAACATCATCCTGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: CHNTGLCRYGYRFLCFTILTGFA*EHHPGN Trigger: GTTTCCAGGATGATGTTCCCATGCAAAACCTGTCAG...TATAGTAAAGCAGAGAAATCTGTATCCATACCTGCATAGACCTGTATTGTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CCA 90 bp | TATTGCATGGAACAATTAAGAGCATCAGAACCCGCATGCCAGTTACACAACTGTTATCACGCACAGTTATaGCAATGTTTTCCAAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: YCMEQLRASEPACQLHNCYHAQL*QCFPSL Trigger: AAGACTTGGAAAACATTGCCATAACTGTGCGTGATA...ACAGTTGTGTAACTGGCATGCGGGTTCTGATGCTCTTAATTGTTCCATGCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| 3UTR CAA 72 bp | ACAGGGGTATACATTCTTTTGTTAGAGAATTATTCTTaGAGGAGGGCGAGTAATCACAGTACACAAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: TGVYILLLENYS*RRASNHSTQGP Trigger: TGGTCCTTGTGTACTGTGATTACTCGCCCTCCTCAAAGAATAATTCTCTAACAAAAGAATGTATACCCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS TCA 90 bp | TCGTGCACTCCGGGTTGGGTTCATGCGCCGTGTGATCTGTCCCTCTaGGAAGGCCCGTCGTGGTGTTCGCCTCCTAGAAGCCGAAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SCTPGWVHAPCDLSL*EGPSWCSPPRSRRW Trigger: CCACCTTCGGCTTCTAGGAGGCGAACACCACGACGGGCCTTCTCAGAGGGACAGATCACACGGCGCATGAACCCAACCCGGAGTGCACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000177339.2 |
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| CDS-3UTR CAA 90 bp | ACCCGCATGCCAGTTACACAACTGTTGTCTCTGCCACAGGTGCCAGGTGGGACAAGCTCTTCAGTAAGCTaGGTGGCTGAGAAGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: TRMPVTQLLSLPQVPGGTSSSVS*VAEKVK Trigger: CTTCACCTTCTCAGCCACCAAGCTTACTGAAGAGCT...TGTCCCACCTGGCACCTGTGGCAGAGACAACAGTTGTGTAACTGGCATGCGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS TCA 90 bp | CATCATCCTGGAAACCCACAAACTCTTCATCGTCACTGGGAGCACTaGAGATGTCAGCTACTTCTTTGGGGATCTGGGAGCGCGTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: HHPGNPQTLHRHWEH*RCQLLLWGSGSAWP Trigger: TGGCCACGCGCTCCCAGATCCCCAAAGAAGTAGCTGACATCTTCAGTGCTCCCAGTGACGATGAAGAGTTTGTGGGTTTCCAGGATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 |
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| CDS-3UTR CAA 90 bp | TTTGAGCTATGGTCACTCAGGAGGCAAAGCAACAGCCTCTGCAGGAAGGGAGTGTTCCGACAGACCGTCTaGGTATCGATGGTCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: FELWSLRRQSNSLCRKGVFRQTV*VSMVFC Trigger: GCAGAAGACCATCGATACCAAGACGGTCTGTCGGAA...CACTCCCTTCCTGCAGAGGCTGTTGCTTTGCCTCCTGAGTGACCATAGCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS CCA 90 bp | TCGCCTCCTAGAAGCCGAAGGTGGTGTCCGAACAGGGAAGAAATCTaGCACCGAATTCAATTCCGCCAACAACTGAGCAAGCATAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SPPRSRRWCPNREEI*HRIQFRQQLSKHSL Trigger: AAGGCTATGCTTGCTCAGTTGTTGGCGGAATTGAATTCGGTGCCAGATTTCTTCCCTGTTCGGACACCACCTTCGGCTTCTAGGAGGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000177339.2 |
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| CDS GCA 90 bp | AGCCTCCTCTTCATCATCTTCCTCCGCATCATTCATCACAGGGTATaGTTTGTCACTGTCACTCAGCTCCGACTCCATGAGCTCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: SLLFIIFLRIIHHRV*FVTVTQLRLHELWV Trigger: AACCCAGAGCTCATGGAGTCGGAGCTGAGTGACAGTGACAAAGCATACCCTGTGATGAATGATGCGGAGGAAGATGATGAAGAGGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS CCA 90 bp | TCTTTGATGTTCATGGCCCTTTTCAGCAGAGCATCCGAATTCTCTTaGCTCTCAGCTCTGGACTCATCCTCGGCATCAGAAGCAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SLMFMALFSRASEFS*LSALDSSSASEAES Trigger: GGACTCTGCTTCTGATGCCGAGGATGAGTCCAGAGCTGAGAGCCAAGAGAATTCGGATGCTCTGCTGAAAAGGGCCATGAACATCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS CCA 90 bp | ACTCCCGTGAGTCCAAACTACCACAGCTCTCTGACAGGTTTTGCATaGGAACATCATCCTGGAAACCCACAAACTCTTCATCGTCACTGG | + |
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Preference number: 5 (lower is better) Translates to: TPVSPNYHSSLTGFA*EHHPGNPQTLHRHW Trigger: CCAGTGACGATGAAGAGTTTGTGGGTTTCCAGGATGATGTTCCCATGCAAAACCTGTCAGAGAGCTGTGGTAGTTTGGACTCACGGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 |
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| CDS GCA 90 bp | TCCAACTCCCGTGAGTCCAAACTACCACAGCTCTCTGACAGGTTTTaGATGGGAACATCATCCTGGAAACCCACAAACTCTTCATCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SNSRESKLPQLSDRF*MGTSSWKPTNSSSS Trigger: TGACGATGAAGAGTTTGTGGGTTTCCAGGATGATGTTCCCATGCAAAACCTGTCAGAGAGCTGTGGTAGTTTGGACTCACGGGAGTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 |
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| CDS-3UTR CAA 90 bp | TTTGAGCTATGGTCACTCAGGAGGCAAAGCAACAGCCTCTGCAGGAAGGGAGTGGAGTCCGTGTCCTCTTaGAAAATCCTTCTTAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: FELWSLRRQSNSLCRKGVESVSS*KILLSS Trigger: AGAACTAAGAAGGATTTTCAAAGAGGACACGGACTC...CACTCCCTTCCTGCAGAGGCTGTTGCTTTGCCTCCTGAGTGACCATAGCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS CCA 90 bp | AAACTACCACAGCTCTCTGACAGGTTTTGCATGGGAACATCATCCTaGAAACCCACAAACTCTTCATCGTCACTGGGAGCACTGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: KLPQLSDRFCMGTSS*KPTNSSSSLGALKM Trigger: CATCTTCAGTGCTCCCAGTGACGATGAAGAGTTTGTGGGTTTCCAGGATGATGTTCCCATGCAAAACCTGTCAGAGAGCTGTGGTAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 |
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| CDS GCA 90 bp | CTTCTTAGTTCTTCTGTGAAGTATTTGGAACGGAAGCACACATTCTaGTGTTTCTCCAACTCCCGTGAGTCCAAACTACCACAGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LLSSSVKYLERKHTF*CFSNSRESKLPQLS Trigger: AGAGAGCTGTGGTAGTTTGGACTCACGGGAGTTGGAGAAACAGCAGAATGTGTGCTTCCGTTCCAAATACTTCACAGAAGAACTAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CAA 90 bp | GAGGCCTCCAGTGTCTGTTTCTATTGTCTCTTAATAAAAAGGACACCTTACTCAAGCATCCGAATTCTCTaGGCTCTCAGCTCTGGACTC | + |
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Preference number: 5 (lower is better) Translates to: EASSVCFYCLLIKRTPYSSIRIL*ALSSGL Trigger: GAGTCCAGAGCTGAGAGCCAAGAGAATTCGGATGCT...TGAGTAAGGTGTCCTTTTTATTAAGAGACAATAGAAACAGACACTGGAGGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CAA 90 bp | TTCTATTGTCTCTTAATAAAAAGGACACCTTACTCACAGTGTGTGGTTAATTGCGAGTCCTCCTTTCCCTaGGGCTGTCTGGAGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FYCLLIKRTPYSQCVVNCESSFP*GCLELF Trigger: GAAGAGCTCCAGACAGCCCAAGGGAAAGGAGGACTC...GCAATTAACCACACACTGTGAGTAAGGTGTCCTTTTTATTAAGAGACAATAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS-3UTR CAA 90 bp | AGTAACAGGGGTATACATTCTTTTGTTAGAGAATTATTCTTTGAGGAGGGCGAGATCACAGGGTATGCTTaGTCACTGTCACTCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SNRGIHSFVRELFFEEGEITGYA*SLSLSS Trigger: GGAGCTGAGTGACAGTGACAAAGCATACCCTGTGAT...CTCGCCCTCCTCAAAGAATAATTCTCTAACAAAAGAATGTATACCCCTGTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS TCA 90 bp | AGTTATGGCAATGTTTTCCAAGTCTTCCTCAGTGATGTCTTTCACTaGGCGGAAAGAAGATATCCGATGACGTCTATACGTCTGGCATTT | + |
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Preference number: 5 (lower is better) Translates to: SYGNVFQVFLSDVFH*AERRYPMTSIRLAF Trigger: AAATGCCAGACGTATAGACGTCATCGGATATCTTCTTTCCGCTCAGTGAAAGACATCACTGAGGAAGACTTGGAAAACATTGCCATAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000177339.2 |
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| CDS-3UTR CAA 90 bp | GAGAATTATTCTTTGAGGAGGGCGAGTAATCACAGTACACAAGGACCAAACACTATAGCCTTGTTCTCTTaGATGTTCATGGCCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: ENYSLRRASNHSTQGPNTIALFS*MFMALF Trigger: GAAAAGGGCCATGAACATCAAAGAGAACAAGGCTAT...AGTGTTTGGTCCTTGTGTACTGTGATTACTCGCCCTCCTCAAAGAATAATTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS TCA 72 bp | GGGGTCGTGCACTCCGGGTTGGGTTCATGCGCCGTGTaGTCTGTCCCTCTGAGAAGGCCCGTCGTGGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GVVHSGLGSCAV*SVPLRRPVVVF Trigger: GAACACCACGACGGGCCTTCTCAGAGGGACAGATCACACGGCGCATGAACCCAACCCGGAGTGCACGACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000177339.2 |
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| CDS TCA 72 bp | CCGGGTTGGGTTCATGCGCCGTGTGATCTGTCCCTCTaGGAAGGCCCGTCGTGGTGTTCGCCTCCTAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PGWVHAPCDLSL*EGPSWCSPPRS Trigger: GCTTCTAGGAGGCGAACACCACGACGGGCCTTCTCAGAGGGACAGATCACACGGCGCATGAACCCAACCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000177339.2 |
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| CDS GCA 72 bp | CACAGCGGCCATCTCGCCTCCGGCAGTAACTGCAATTaGAGATGCCACGGCAGGGAGGACATGTCCACTTCG | + |
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Preference number: 6 (lower is better) Translates to: HSGHLASGSNCN*RCHGREDMSTS Trigger: CGAAGTGGACATGTCCTCCCTGCCGTGGCATCTGCAATTGCAGTTACTGCCGGAGGCGAGATGGCCGCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS GCA 72 bp | GGCCATCTCGCCTCCGGCAGTAACTGCAATTGCAGATaGCACGGCAGGGAGGACATGTCCACTTCGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: GHLASGSNCNCR*HGREDMSTSDP Trigger: TGGATCCGAAGTGGACATGTCCTCCCTGCCGTGGCATCTGCAATTGCAGTTACTGCCGGAGGCGAGATGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021592.16 |
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| CDS CCA 72 bp | GGCCCGTCGTGGTGTTCGCCTCCTAGAAGCCGAAGGTaGTGTCCGAACAGGGAAGAAATCTGGCACCGAATT | + |
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Preference number: 6 (lower is better) Translates to: GPSWCSPPRSRR*CPNREEIWHRI Trigger: AATTCGGTGCCAGATTTCTTCCCTGTTCGGACACCACCTTCGGCTTCTAGGAGGCGAACACCACGACGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000177339.2 |
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| CDS GCA 72 bp | GGTGAAGTTCTCCAGAGCAAACTTTTCAGGGGGTCGTaGACTCCGGGTTGGGTTCATGCGCCGTGTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: GEVLQSKLFRGS*TPGWVHAPCDL Trigger: CAGATCACACGGCGCATGAACCCAACCCGGAGTGCACGACCCCCTGAAAAGTTTGCTCTGGAGAACTTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000177339.2 |
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| CDS CCA 72 bp | TCAGCAGAGCATCCGAATTCTCTTGGCTCTCAGCTCTaGACTCATCCTCGGCATCAGAAGCAGAGTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SAEHPNSLGSQL*THPRHQKQSPP Trigger: AGGAGGACTCTGCTTCTGATGCCGAGGATGAGTCCAGAGCTGAGAGCCAAGAGAATTCGGATGCTCTGCTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS CAA 72 bp | GTTCATGGCCCTTTTCAGCAGAGCATCCGAATTCTCTaGGCTCTCAGCTCTGGACTCATCCTCGGCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: VHGPFQQSIRIL*ALSSGLILGIR Trigger: TCTGATGCCGAGGATGAGTCCAGAGCTGAGAGCCAAGAGAATTCGGATGCTCTGCTGAAAAGGGCCATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS CAA 90 bp | CTCTTTGATGTTCATGGCCCTTTTCAGCAGAGCATCCGAATTCTCTaGGCTCTCAGCTCTGGACTCATCCTCGGCATCAGAAGCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: LFDVHGPFQQSIRIL*ALSSGLILGIRSRV Trigger: GACTCTGCTTCTGATGCCGAGGATGAGTCCAGAGCTGAGAGCCAAGAGAATTCGGATGCTCTGCTGAAAAGGGCCATGAACATCAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS CCA 72 bp | TTCATGGCCCTTTTCAGCAGAGCATCCGAATTCTCTTaGCTCTCAGCTCTGGACTCATCCTCGGCATCAGAA | + |
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Preference number: 6 (lower is better) Translates to: FMALFSRASEFS*LSALDSSSASE Trigger: TTCTGATGCCGAGGATGAGTCCAGAGCTGAGAGCCAAGAGAATTCGGATGCTCTGCTGAAAAGGGCCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS CCA 72 bp | AGAAGCCGAAGGTGGTGTCCGAACAGGGAAGAAATCTaGCACCGAATTCAATTCCGCCAACAACTGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RSRRWCPNREEI*HRIQFRQQLSK Trigger: CTTGCTCAGTTGTTGGCGGAATTGAATTCGGTGCCAGATTTCTTCCCTGTTCGGACACCACCTTCGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000177339.2 |
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| CDS CAA 72 bp | TCATCCTCGGCATCAGAAGCAGAGTCCTCCTTTCCCTaGGGCTGTCTGGAGCTCTTCTTTCTTCTAAGATCC | + |
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Preference number: 6 (lower is better) Translates to: SSSASEAESSFP*GCLELFFLLRS Trigger: GGATCTTAGAAGAAAGAAGAGCTCCAGACAGCCCAAGGGAAAGGAGGACTCTGCTTCTGATGCCGAGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS CAA 90 bp | TCCTCTTCATCATCTTCCTCCGCATCATTCATCACAGGGTATGCTTaGTCACTGTCACTCAGCTCCGACTCCATGAGCTCTGGGTTACTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSSASFITGYA*SLSLSSDSMSSGLL Trigger: CAGTAACCCAGAGCTCATGGAGTCGGAGCTGAGTGACAGTGACAAAGCATACCCTGTGATGAATGATGCGGAGGAAGATGATGAAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS CCA 72 bp | TTTGTCACTGTCACTCAGCTCCGACTCCATGAGCTCTaGGTTACTGCTCATGTTCAGCTCGCTCTCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: FVTVTQLRLHEL*VTAHVQLALCK Trigger: TTTACAGAGAGCGAGCTGAACATGAGCAGTAACCCAGAGCTCATGGAGTCGGAGCTGAGTGACAGTGACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS CAA 72 bp | TCATCTTCCTCCGCATCATTCATCACAGGGTATGCTTaGTCACTGTCACTCAGCTCCGACTCCATGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSSSASFITGYA*SLSLSSDSMSS Trigger: AGAGCTCATGGAGTCGGAGCTGAGTGACAGTGACAAAGCATACCCTGTGATGAATGATGCGGAGGAAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS TCA 72 bp | AATGTTTTCCAAGTCTTCCTCAGTGATGTCTTTCACTaGGCGGAAAGAAGATATCCGATGACGTCTATACGT | + |
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Preference number: 6 (lower is better) Translates to: NVFQVFLSDVFH*AERRYPMTSIR Trigger: ACGTATAGACGTCATCGGATATCTTCTTTCCGCTCAGTGAAAGACATCACTGAGGAAGACTTGGAAAACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021592.16 ENSMUST00000177339.2 |
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| CDS CAA 90 bp | TCTGTAAATCCTTCAAAATCTTCCATTTCTGAGTCCGTGTCCTCTTaGAAAATCCTTCTTAGTTCTTCTGTGAAGTATTTGGAACGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SVNPSKSSISESVSS*KILLSSSVKYLERK Trigger: CTTCCGTTCCAAATACTTCACAGAAGAACTAAGAAGGATTTTCAAAGAGGACACGGACTCAGAAATGGAAGATTTTGAAGGATTTACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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| CDS CAA 72 bp | CCTTCAAAATCTTCCATTTCTGAGTCCGTGTCCTCTTaGAAAATCCTTCTTAGTTCTTCTGTGAAGTATTTG | + |
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Preference number: 6 (lower is better) Translates to: PSKSSISESVSS*KILLSSSVKYL Trigger: CAAATACTTCACAGAAGAACTAAGAAGGATTTTCAAAGAGGACACGGACTCAGAAATGGAAGATTTTGAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021592.16 ENSMUST00000176735.8 ENSMUST00000177339.2 |
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