Pregenerated sensors for CDCA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047832Ensembl transcript IDs: ENSMUST00000062092.7, ENSMUST00000220899.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGGTGCTGGGTGGTTCGGGCATGTCATGTCCTCATGTCACATGTaGTGGGCTGGGAACCAGACAGTGATGGCCAAGGACAAGACCTGC | + |
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Preference number: 1 (lower is better) Translates to: CGAGWFGHVMSSCHM*WAGNQTVMAKDKTC Trigger: GCAGGTCTTGTCCTTGGCCATCACTGTCTGGTTCCCAGCCCAGCACATGTGACATGAGGACATGACATGCCCGAACCACCCAGCACCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR GCA 90 bp | GGGAGCCAGTGGTCTCCACGTACACACTTGACATGGAGCATGTGGTaGTGGGTGGTTCGGGCATGTCATGTCCTCATGTCACATGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: GSQWSPRTHLTWSMW*WVVRACHVLMSHVL Trigger: CAGCACATGTGACATGAGGACATGACATGCCCGAACCACCCAGCACCACATGCTCCATGTCAAGTGTGTACGTGGAGACCACTGGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR CCA 90 bp | GGTGCTGGGTGGTTCGGGCATGTCATGTCCTCATGTCACATGTGCTaGGCTGGGAACCAGACAGTGATGGCCAAGGACAAGACCTGCATA | + |
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Preference number: 1 (lower is better) Translates to: GAGWFGHVMSSCHMC*AGNQTVMAKDKTCI Trigger: TATGCAGGTCTTGTCCTTGGCCATCACTGTCTGGTTCCCAGCCCAGCACATGTGACATGAGGACATGACATGCCCGAACCACCCAGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR CCA 90 bp | AGCCAGTGGTCTCCACGTACACACTTGACATGGAGCATGTGGTGCTaGGTGGTTCGGGCATGTCATGTCCTCATGTCACATGTGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: SQWSPRTHLTWSMWC*VVRACHVLMSHVLG Trigger: GCCCAGCACATGTGACATGAGGACATGACATGCCCGAACCACCCAGCACCACATGCTCCATGTCAAGTGTGTACGTGGAGACCACTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR GCA 90 bp | ATGTGCTGGGCTGGGAACCAGACAGTGATGGCCAAGGACAAGACCTaGATAAGGCACTGCCTCACAGCAGTCCCTGAAGAACTGGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: MCWAGNQTVMAKDKT*IRHCLTAVPEELVL Trigger: CAACACCAGTTCTTCAGGGACTGCTGTGAGGCAGTGCCTTATGCAGGTCTTGTCCTTGGCCATCACTGTCTGGTTCCCAGCCCAGCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR CCA 90 bp | TGGGTGGTTCGGGCATGTCATGTCCTCATGTCACATGTGCTGGGCTaGGAACCAGACAGTGATGGCCAAGGACAAGACCTGCATAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: WVVRACHVLMSHVLG*EPDSDGQGQDLHKA Trigger: TGCCTTATGCAGGTCTTGTCCTTGGCCATCACTGTCTGGTTCCCAGCCCAGCACATGTGACATGAGGACATGACATGCCCGAACCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGGGGCCACCCCAGGGTGGAGGAGCCCTAAATCATATGGAGTCGGATTGTTTGCATGTGGTGCTGGGTaGTTCGGGCATGTCATGTCC | + |
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Preference number: 2 (lower is better) Translates to: IGATPGWRSPKSYGVGLFACGAG*FGHVMS Trigger: GGACATGACATGCCCGAACCACCCAGCACCACATGC...AAACAATCCGACTCCATATGATTTAGGGCTCCTCCACCCTGGGGTGGCCCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCTCTCTGAGCACAGGCCTGGGAGCCAGTGGTCTCCACGTACACACTTGACAGGCTACATTTACAGTTaGCTTGGGAGTGTAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: TLSEHRPGSQWSPRTHLTGYIYS*LGSVET Trigger: AGTCTCTACACTCCCAAGGCAACTGTAAATGTAGCC...TGTCAAGTGTGTACGTGGAGACCACTGGCTCCCAGGCCTGTGCTCAGAGAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGGGGCCACCCCAGGGTGGAGGAGCCCTAAATCATATGGAGTCGGATTGTTTTCCTCATGTCACATGTaGTGGGCTGGGAACCAGACA | + |
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Preference number: 2 (lower is better) Translates to: IGATPGWRSPKSYGVGLFSSCHM*WAGNQT Trigger: TGTCTGGTTCCCAGCCCAGCACATGTGACATGAGGA...AAACAATCCGACTCCATATGATTTAGGGCTCCTCCACCCTGGGGTGGCCCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCTCTGAGCACAGGCCTGGGAGCCAGTGGTCTCCACGTACACACTTGACACATTTACAGTTGCCTTaGGAGTGTAGAGACTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: TLSEHRPGSQWSPRTHLTHLQLP*ECRDSV Trigger: TACTGAGTCTCTACACTCCCAAGGCAACTGTAAATG...TGTCAAGTGTGTACGTGGAGACCACTGGCTCCCAGGCCTGTGCTCAGAGAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGGGGCCACCCCAGGGTGGAGGAGCCCTAAATCATATGGAGTCGGATTGTTTGAATGTAGACCATACTaGAGCCTCTCATGTAAACAC | + |
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Preference number: 2 (lower is better) Translates to: IGATPGWRSPKSYGVGLFECRPY*SLSCKH Trigger: GTGTTTACATGAGAGGCTCCAGTATGGTCTACATTC...AAACAATCCGACTCCATATGATTTAGGGCTCCTCCACCCTGGGGTGGCCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCATAAGGCACTGCCTCACAGCAGTCCCTGAAGAACTGGTGTTGGGATTTCAGTGGAGCTGTGCATaGTTCTTTTCAAGCTCTACT | + |
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Preference number: 2 (lower is better) Translates to: TCIRHCLTAVPEELVLGFQWSCA*FFSSST Trigger: AGTAGAGCTTGAAAAGAACCATGCACAGCTCCACTG...AAATCCCAACACCAGTTCTTCAGGGACTGCTGTGAGGCAGTGCCTTATGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR TCA 72 bp | ACAGGCCTGGGAGCCAGTGGTCTCCACGTACACACTTaGCATGGAGCATGTGGTGCTGGGTGGTTCGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: TGLGASGLHVHT*HGACGAGWFGH Trigger: ATGCCCGAACCACCCAGCACCACATGCTCCATGTCAAGTGTGTACGTGGAGACCACTGGCTCCCAGGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR GCA 72 bp | GGGTGGTTCGGGCATGTCATGTCCTCATGTCACATGTaGTGGGCTGGGAACCAGACAGTGATGGCCAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: GWFGHVMSSCHM*WAGNQTVMAKD Trigger: GTCCTTGGCCATCACTGTCTGGTTCCCAGCCCAGCACATGTGACATGAGGACATGACATGCCCGAACCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR TCA 72 bp | GACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTaGGCTCCATGGGGACTGGTGGCCTCACCCTTAGCC | + |
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Preference number: 3 (lower is better) Translates to: DKCLSVSGSQHT*APWGLVASPLA Trigger: GGCTAAGGGTGAGGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR CCA 72 bp | CGGGCATGTCATGTCCTCATGTCACATGTGCTGGGCTaGGAACCAGACAGTGATGGCCAAGGACAAGACCTG | + |
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Preference number: 3 (lower is better) Translates to: RACHVLMSHVLG*EPDSDGQGQDL Trigger: CAGGTCTTGTCCTTGGCCATCACTGTCTGGTTCCCAGCCCAGCACATGTGACATGAGGACATGACATGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR GCA 72 bp | GCTGGGAACCAGACAGTGATGGCCAAGGACAAGACCTaGATAAGGCACTGCCTCACAGCAGTCCCTGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: AGNQTVMAKDKT*IRHCLTAVPEE Trigger: TTCTTCAGGGACTGCTGTGAGGCAGTGCCTTATGCAGGTCTTGTCCTTGGCCATCACTGTCTGGTTCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR CCA 72 bp | TGGTTCGGGCATGTCATGTCCTCATGTCACATGTGCTaGGCTGGGAACCAGACAGTGATGGCCAAGGACAAG | + |
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Preference number: 3 (lower is better) Translates to: WFGHVMSSCHMC*AGNQTVMAKDK Trigger: CTTGTCCTTGGCCATCACTGTCTGGTTCCCAGCCCAGCACATGTGACATGAGGACATGACATGCCCGAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR CCA 72 bp | CAGTGGTCTCCACGTACACACTTGACATGGAGCATGTaGTGCTGGGTGGTTCGGGCATGTCATGTCCTCATG | + |
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Preference number: 3 (lower is better) Translates to: QWSPRTHLTWSM*CWVVRACHVLM Trigger: CATGAGGACATGACATGCCCGAACCACCCAGCACCACATGCTCCATGTCAAGTGTGTACGTGGAGACCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR GCA 72 bp | TGGTCTCCACGTACACACTTGACATGGAGCATGTGGTaGTGGGTGGTTCGGGCATGTCATGTCCTCATGTCA | + |
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Preference number: 3 (lower is better) Translates to: WSPRTHLTWSMW*WVVRACHVLMS Trigger: TGACATGAGGACATGACATGCCCGAACCACCCAGCACCACATGCTCCATGTCAAGTGTGTACGTGGAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR TCA 72 bp | CAAGACCTGCATAAGGCACTGCCTCACAGCAGTCCCTaGAGAACTGGTGTTGGGATTTCCAGGAGTAAGACC | + |
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Preference number: 3 (lower is better) Translates to: QDLHKALPHSSP*RTGVGISRSKT Trigger: GGTCTTACTCCTGGAAATCCCAACACCAGTTCTTCAGGGACTGCTGTGAGGCAGTGCCTTATGCAGGTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR CCA 72 bp | TCTCCACGTACACACTTGACATGGAGCATGTGGTGCTaGGTGGTTCGGGCATGTCATGTCCTCATGTCACAT | + |
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Preference number: 3 (lower is better) Translates to: SPRTHLTWSMWC*VVRACHVLMSH Trigger: ATGTGACATGAGGACATGACATGCCCGAACCACCCAGCACCACATGCTCCATGTCAAGTGTGTACGTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR CCA 72 bp | GGTTCTTTTCAAGCTCTACTAGAATGTAGACCATACTaGAGCCTCTCATGTAAACACCCGGCCGGCTACATT | + |
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Preference number: 3 (lower is better) Translates to: GSFQALLECRPY*SLSCKHPAGYI Trigger: AATGTAGCCGGCCGGGTGTTTACATGAGAGGCTCCAGTATGGTCTACATTCTAGTAGAGCTTGAAAAGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR TCA 90 bp | AGAGCTCCGATCCGCCAGAGCAGACCCAGTGAGGGGGCAGTGGAGCTGTGCATGCCTTTGCCCTGGTGCTaGGCCAACGATGGGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RAPIRQSRPSEGAVELCMPLPWC*ANDGEL Trigger: GAGCTCCCCATCGTTGGCTCAGCACCAGGGCAAAGG...CATGCACAGCTCCACTGCCCCCTCACTGGGTCTGCTCTGGCGGATCGGAGCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR TCA 90 bp | AGAGCTCCGATCCGCCAGAGCAGACCCAGTGAGGGGGCAGTGGAGCTGTGCATGTCCCAGAGGCTGCTCTaGGGGTTCCTTTGCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: RAPIRQSRPSEGAVELCMSQRLL*GFLCPG Trigger: ACCAGGGCAAAGGAACCCTCAGAGCAGCCTCTGGGA...CATGCACAGCTCCACTGCCCCCTCACTGGGTCTGCTCTGGCGGATCGGAGCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| 3UTR CAA 72 bp | CACAGGCCTGGGAGCCAGTGGTCTCCACGTACACACTaGACATGGAGCATGTGGTGCTGGGTGGTTCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HRPGSQWSPRTH*TWSMWCWVVRA Trigger: TGCCCGAACCACCCAGCACCACATGCTCCATGTCAAGTGTGTACGTGGAGACCACTGGCTCCCAGGCCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | CTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTGGTGGCCTCACCCTAGTTCAGGAGCAGGGTaGTCTTCCTCAGCTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LSLGHNTRELHGDWWPHPSSGAG*SSSAPL Trigger: GAGGGGAGCTGAGGAAGAGCACCCTGCTCCTGAACT...AGGGTGAGGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | TGGGTCACAACACACGTGAGCTCCATGGGGACTGGTGGCCTCACCCTTAGCCCACCATCTCCCAGAGGCTaGTCTGAGGGTTCCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: WVTTHVSSMGTGGLTLSPPSPRG*SEGSFA Trigger: GGCAAAGGAACCCTCAGAGCAGCCTCTGGGAGATGG...TGGGCTAAGGGTGAGGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTGGTGGCCTCACCCTAACTGGGAGGAGGGGTaGCTGCAGCAAAGCCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LSLGHNTRELHGDWWPHPNWEEG*LQQSPQ Trigger: TTGAGGGCTTTGCTGCAGCCACCCCTCCTCCCAGTT...AGGGTGAGGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR TCA 90 bp | CTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTGGTGGCCTCACCCTGGCTCCACTAGCATGTaGCAGAGCTGGAGCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: LSLGHNTRELHGDWWPHPGSTSM*QSWSLT Trigger: TGTCAAGCTCCAGCTCTGTCACATGCTAGTGGAGCC...AGGGTGAGGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | ACCCTCTCTGAGCACAGGCCTGGGAGCCAGTGGTCTCCACGTACACACTTGACACCATCTCCCAGAGGCTaGTCTGAGGGTTCCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: TLSEHRPGSQWSPRTHLTPSPRG*SEGSFA Trigger: GGCAAAGGAACCCTCAGAGCAGCCTCTGGGAGATGG...TGTCAAGTGTGTACGTGGAGACCACTGGCTCCCAGGCCTGTGCTCAGAGAGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | GGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTGGGAGGAGGGGTGGCTaGAGCAAAGCCCTCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GQVLICLWVTTHVSSMGTGRRGG*SKALKA Trigger: GGCCTTGAGGGCTTTGCTGCAGCCACCCCTCCTCCC...AGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | CTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTGGTGGCCTCACCCTCAGCCAGGTCAGACTTaGAAGTGGAACTGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSLGHNTRELHGDWWPHPQPGQT*KWNWEE Trigger: CTCCTCCCAGTTCCACTTGCAAGTCTGACCTGGCTG...AGGGTGAGGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | AGCAGACCCAGTGAGGGGGCAGTGGAGCTGTGCATGGTTCTTTTCAAGCTCTACTGGGGTGCCATCCCATaGCACACACCATCCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SRPSEGAVELCMVLFKLYWGAIP*HTPSWL Trigger: GAGCCAGGATGGTGTGTGGCATGGGATGGCACCCCA...GTAGAGCTTGAAAAGAACCATGCACAGCTCCACTGCCCCCTCACTGGGTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | TGGGTCACAACACACGTGAGCTCCATGGGGACTGGTGGCCTCACCCTTAGCCCAATCTACATTCTGGGGTaGCATCCCATGCCACACACC | + |
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Preference number: 4 (lower is better) Translates to: WVTTHVSSMGTGGLTLSPIYILG*HPMPHT Trigger: GGTGTGTGGCATGGGATGGCACCCCAGAATGTAGAT...TGGGCTAAGGGTGAGGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTGGTGGCCTCACCCTTGCCACACACCATCCTaGCTCATTTCCTCCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: LSLGHNTRELHGDWWPHPCHTPS*LISSWI Trigger: GATCCAGGAGGAAATGAGCCAGGATGGTGTGTGGCA...AGGGTGAGGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTGGTGGCCTCACCCTGGCCATTGCAGAGACTaGACTTGGTCCCACTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LSLGHNTRELHGDWWPHPGHCRD*TWSHSS Trigger: TGATGAGTGGGACCAAGTCCAGTCTCTGCAATGGCC...AGGGTGAGGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR TCA 90 bp | ATAGGGGCCACCCCAGGGTGGAGGAGCCCTAAATCATATGGAGTCGGATTGTTTTCCCAGAGGCTGCTCTaGGGGTTCCTTTGCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: IGATPGWRSPKSYGVGLFSQRLL*GFLCPG Trigger: ACCAGGGCAAAGGAACCCTCAGAGCAGCCTCTGGGA...AAACAATCCGACTCCATATGATTTAGGGCTCCTCCACCCTGGGGTGGCCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | GGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTTGGGGTGCCATCCCATaGCACACACCATCCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GQVLICLWVTTHVSSMGTWGAIP*HTPSWL Trigger: GAGCCAGGATGGTGTGTGGCATGGGATGGCACCCCA...AGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | CTCTTAGGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGAGGAGGGGTGGCTaGAGCAAAGCCCTCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LLGQVLICLWVTTHVSSMGRRGG*SKALKA Trigger: GGCCTTGAGGGCTTTGCTGCAGCCACCCCTCCTCCC...CATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCCTAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | GGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTAGTTCAGGAGCAGGGTaGTCTTCCTCAGCTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GQVLICLWVTTHVSSMGTSSGAG*SSSAPL Trigger: GAGGGGAGCTGAGGAAGAGCACCCTGCTCCTGAACT...AGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | AGCAGACCCAGTGAGGGGGCAGTGGAGCTGTGCATGGTTCTTTTCAAGCTCTACCAGCCAGGTCAGACTTaGAAGTGGAACTGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SRPSEGAVELCMVLFKLYQPGQT*KWNWEE Trigger: CTCCTCCCAGTTCCACTTGCAAGTCTGACCTGGCTG...GTAGAGCTTGAAAAGAACCATGCACAGCTCCACTGCCCCCTCACTGGGTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | TGGGTCACAACACACGTGAGCTCCATGGGGACTGGTGGCCTCACCCTTAGCCCAGTTCCTCCACTGAACTaGAGTTTTTGTTCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: WVTTHVSSMGTGGLTLSPVPPLN*SFCSPG Trigger: CCCTGGAGAACAAAAACTCCAGTTCAGTGGAGGAAC...TGGGCTAAGGGTGAGGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | ATAGGGGCCACCCCAGGGTGGAGGAGCCCTAAATCATATGGAGTCGGATTGTTTAACTGGGAGGAGGGGTaGCTGCAGCAAAGCCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: IGATPGWRSPKSYGVGLFNWEEG*LQQSPQ Trigger: TTGAGGGCTTTGCTGCAGCCACCCCTCCTCCCAGTT...AAACAATCCGACTCCATATGATTTAGGGCTCCTCCACCCTGGGGTGGCCCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | GGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTGGTCAGACTTGCAAGTaGAACTGGGAGGAGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GQVLICLWVTTHVSSMGTGQTCK*NWEEGW Trigger: CCACCCCTCCTCCCAGTTCCACTTGCAAGTCTGACC...AGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR TCA 90 bp | ATAGGGGCCACCCCAGGGTGGAGGAGCCCTAAATCATATGGAGTCGGATTGTTTGGCTCCACTAGCATGTaGCAGAGCTGGAGCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: IGATPGWRSPKSYGVGLFGSTSM*QSWSLT Trigger: TGTCAAGCTCCAGCTCTGTCACATGCTAGTGGAGCC...AAACAATCCGACTCCATATGATTTAGGGCTCCTCCACCCTGGGGTGGCCCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR TCA 90 bp | ACCCTCTCTGAGCACAGGCCTGGGAGCCAGTGGTCTCCACGTACACACTTGACATGGTCCAGTGACTTCTaGAAGCTTCCCCTGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TLSEHRPGSQWSPRTHLTWSSDF*KLPLFS Trigger: AGAAAACAGGGGAAGCTTTCAGAAGTCACTGGACCA...TGTCAAGTGTGTACGTGGAGACCACTGGCTCCCAGGCCTGTGCTCAGAGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | ACCCTCTCTGAGCACAGGCCTGGGAGCCAGTGGTCTCCACGTACACACTTGACATCGGAAACCGAGTTTTaGAAGGGAGCATCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TLSEHRPGSQWSPRTHLTSETEF*KGASSS Trigger: ACTGGAAGATGCTCCCTTGCAAAACTCGGTTTCCGA...TGTCAAGTGTGTACGTGGAGACCACTGGCTCCCAGGCCTGTGCTCAGAGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | AGCAGACCCAGTGAGGGGGCAGTGGAGCTGTGCATGGTTCTTTTCAAGCTCTACTGCCACACACCATCCTaGCTCATTTCCTCCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: SRPSEGAVELCMVLFKLYCHTPS*LISSWI Trigger: GATCCAGGAGGAAATGAGCCAGGATGGTGTGTGGCA...GTAGAGCTTGAAAAGAACCATGCACAGCTCCACTGCCCCCTCACTGGGTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCATAAGGCACTGCCTCACAGCAGTCCCTGAAGAACTGGTGTTGGGATTTGGTCAGACTTGCAAGTaGAACTGGGAGGAGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TCIRHCLTAVPEELVLGFGQTCK*NWEEGW Trigger: CCACCCCTCCTCCCAGTTCCACTTGCAAGTCTGACC...AAATCCCAACACCAGTTCTTCAGGGACTGCTGTGAGGCAGTGCCTTATGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR TCA 90 bp | ACCCTCTCTGAGCACAGGCCTGGGAGCCAGTGGTCTCCACGTACACACTTGACAAAATATCTGGTCCAGTaGCTTCTGAAAGCTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: TLSEHRPGSQWSPRTHLTKYLVQ*LLKASP Trigger: AGGGGAAGCTTTCAGAAGTCACTGGACCAGATATTT...TGTCAAGTGTGTACGTGGAGACCACTGGCTCCCAGGCCTGTGCTCAGAGAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | ACCCTCTCTGAGCACAGGCCTGGGAGCCAGTGGTCTCCACGTACACACTTGACATATAGGAAGGGACAGTaGCAAAACCCTCTACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TLSEHRPGSQWSPRTHLTYRKGQ*QNPLLL Trigger: AAGGAGTAGAGGGTTTTGGCACTGTCCCTTCCTATA...TGTCAAGTGTGTACGTGGAGACCACTGGCTCCCAGGCCTGTGCTCAGAGAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | ATAGGGGCCACCCCAGGGTGGAGGAGCCCTAAATCATATGGAGTCGGATTGTTTTGGCTCATTTCCTCCTaGATCTGCCGGACTGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: IGATPGWRSPKSYGVGLFWLISS*ICRTVL Trigger: CAACACAGTCCGGCAGATCCAGGAGGAAATGAGCCA...AAACAATCCGACTCCATATGATTTAGGGCTCCTCCACCCTGGGGTGGCCCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | GGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTGACACAGGATCTCTGTaGACACCAGGCGTTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: GQVLICLWVTTHVSSMGTDTGSL*TPGVQL Trigger: CAGTTGAACGCCTGGTGTCCACAGAGATCCTGTGTC...AGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCATAAGGCACTGCCTCACAGCAGTCCCTGAAGAACTGGTGTTGGGATTTGGCCATTGCAGAGACTaGACTTGGTCCCACTCATCA | + |
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Preference number: 4 (lower is better) Translates to: TCIRHCLTAVPEELVLGFGHCRD*TWSHSS Trigger: TGATGAGTGGGACCAAGTCCAGTCTCTGCAATGGCC...AAATCCCAACACCAGTTCTTCAGGGACTGCTGTGAGGCAGTGCCTTATGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | ATAGGGGCCACCCCAGGGTGGAGGAGCCCTAAATCATATGGAGTCGGATTGTTTTCGGAAACCGAGTTTTaGAAGGGAGCATCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: IGATPGWRSPKSYGVGLFSETEF*KGASSS Trigger: ACTGGAAGATGCTCCCTTGCAAAACTCGGTTTCCGA...AAACAATCCGACTCCATATGATTTAGGGCTCCTCCACCCTGGGGTGGCCCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | CTCTTAGGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGTGGCTCATTTCCTCCTaGATCTGCCGGACTGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LLGQVLICLWVTTHVSSMWLISS*ICRTVL Trigger: CAACACAGTCCGGCAGATCCAGGAGGAAATGAGCCA...CATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCCTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR GCA 90 bp | GGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTTATAGGAAGGGACAGTaGCAAAACCCTCTACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GQVLICLWVTTHVSSMGTYRKGQ*QNPLLL Trigger: AAGGAGTAGAGGGTTTTGGCACTGTCCCTTCCTATA...AGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR TCA 90 bp | CTCTTAGGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGTGGTCCAGTGACTTCTaGAAGCTTCCCCTGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLGQVLICLWVTTHVSSMWSSDF*KLPLFS Trigger: AGAAAACAGGGGAAGCTTTCAGAAGTCACTGGACCA...CATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCCTAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CCA 90 bp | CTCTTAGGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGGTTCCTCCACTGAACTaGAGTTTTTGTTCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLGQVLICLWVTTHVSSMVPPLN*SFCSPG Trigger: CCCTGGAGAACAAAAACTCCAGTTCAGTGGAGGAAC...CATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCCTAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS GCA 90 bp | GCCATCCCATGCCACACACCATCCTGGCTCATTTCCTCCTGGATCTaGCGGACTGTGTTGGCGATGAGGACCGAGCGGCAGAGATTGGGC | + |
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Preference number: 5 (lower is better) Translates to: AIPCHTPSWLISSWI*RTVLAMRTERQRLG Trigger: GCCCAATCTCTGCCGCTCGGTCCTCATCGCCAACACAGTCCGGCAGATCCAGGAGGAAATGAGCCAGGATGGTGTGTGGCATGGGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS TCA 90 bp | GTCCATCTCCCAGAGGCTGCTCTGAGGGTTCCTTTGCCCTGGTGCTaGGCCAACGATGGGGAGCTCGGAAACCGAGTTTTGCAAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: VHLPEAALRVPLPWC*ANDGELGNRVLQGS Trigger: GCTCCCTTGCAAAACTCGGTTTCCGAGCTCCCCATCGTTGGCTCAGCACCAGGGCAAAGGAACCCTCAGAGCAGCCTCTGGGAGATGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS GCA 90 bp | TGCCCTGGTGCTGAGCCAACGATGGGGAGCTCGGAAACCGAGTTTTaGAAGGGAGCATCTTCCAGTTCAGGAGCAGGGTGCTCTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: CPGAEPTMGSSETEF*KGASSSSGAGCSSS Trigger: TGAGGAAGAGCACCCTGCTCCTGAACTGGAAGATGCTCCCTTGCAAAACTCGGTTTCCGAGCTCCCCATCGTTGGCTCAGCACCAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS CCA 90 bp | CCTCACTGTACGACACAGGATCTCTGTGGACACCAGGCGTTCAACTaGTGCCCGATCTACATTCTGGGGTGCCATCCCATGCCACACACC | + |
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Preference number: 5 (lower is better) Translates to: PHCTTQDLCGHQAFN*CPIYILGCHPMPHT Trigger: GGTGTGTGGCATGGGATGGCACCCCAGAATGTAGATCGGGCACCAGTTGAACGCCTGGTGTCCACAGAGATCCTGTGTCGTACAGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS CCA 90 bp | GGTGCTCTTCCTCAGCTCCCCTCACTGTACGACACAGGATCTCTGTaGACACCAGGCGTTCAACTGGTGCCCGATCTACATTCTGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: GALPQLPSLYDTGSL*TPGVQLVPDLHSGV Trigger: CACCCCAGAATGTAGATCGGGCACCAGTTGAACGCCTGGTGTCCACAGAGATCCTGTGTCGTACAGTGAGGGGAGCTGAGGAAGAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS GCA 90 bp | CACTGTACGACACAGGATCTCTGTGGACACCAGGCGTTCAACTGGTaGCCGATCTACATTCTGGGGTGCCATCCCATGCCACACACCATC | + |
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Preference number: 5 (lower is better) Translates to: HCTTQDLCGHQAFNW*PIYILGCHPMPHTI Trigger: GATGGTGTGTGGCATGGGATGGCACCCCAGAATGTAGATCGGGCACCAGTTGAACGCCTGGTGTCCACAGAGATCCTGTGTCGTACAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS GCA 90 bp | TGGAACTGGGAGGAGGGGTGGCTGCAGCAAAGCCCTCAAGGCCATTaGAGAGACTGGACTTGGTCCCACTCATCATTCCTGTTAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: WNWEEGWLQQSPQGH*RDWTWSHSSFLLAL Trigger: CAGTGCTAACAGGAATGATGAGTGGGACCAAGTCCAGTCTCTGCAATGGCCTTGAGGGCTTTGCTGCAGCCACCCCTCCTCCCAGTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CAA 90 bp | ACCCTCTCTGAGCACAGGCCTGGGAGCCAGTGGTCTCCACGTACACACTTGACAACTGAACTGGAGTTTTaGTTCTCCAGGGTCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: TLSEHRPGSQWSPRTHLTTELEF*FSRVSN Trigger: ATTTGAGACCCTGGAGAACAAAAACTCCAGTTCAGT...TGTCAAGTGTGTACGTGGAGACCACTGGCTCCCAGGCCTGTGCTCAGAGAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS-3UTR CAA 90 bp | GGACAAGTGCTTATCTGTCTCTGGGTCACAACACACGTGAGCTCCATGGGGACTACTGAACTGGAGTTTTaGTTCTCCAGGGTCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: GQVLICLWVTTHVSSMGTTELEF*FSRVSN Trigger: ATTTGAGACCCTGGAGAACAAAAACTCCAGTTCAGT...AGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATAAGCACTTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS GCA 72 bp | TGCCACACACCATCCTGGCTCATTTCCTCCTGGATCTaGCGGACTGTGTTGGCGATGAGGACCGAGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: CHTPSWLISSWI*RTVLAMRTERQ Trigger: CTGCCGCTCGGTCCTCATCGCCAACACAGTCCGGCAGATCCAGGAGGAAATGAGCCAGGATGGTGTGTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS CCA 72 bp | GACACCAGGCGTTCAACTGGTGCCCGATCTACATTCTaGGGTGCCATCCCATGCCACACACCATCCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: DTRRSTGARSTF*GAIPCHTPSWL Trigger: GAGCCAGGATGGTGTGTGGCATGGGATGGCACCCCAGAATGTAGATCGGGCACCAGTTGAACGCCTGGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS GCA 72 bp | GTCAGACTTGCAAGTGGAACTGGGAGGAGGGGTGGCTaGAGCAAAGCCCTCAAGGCCATTGCAGAGACTGGA | + |
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Preference number: 6 (lower is better) Translates to: VRLASGTGRRGG*SKALKAIAETG Trigger: TCCAGTCTCTGCAATGGCCTTGAGGGCTTTGCTGCAGCCACCCCTCCTCCCAGTTCCACTTGCAAGTCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS CAA 90 bp | GTGGAACTGGGAGGAGGGGTGGCTGCAGCAAAGCCCTCAAGGCCATaGCAGAGACTGGACTTGGTCCCACTCATCATTCCTGTTAGCACT | + |
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Preference number: 6 (lower is better) Translates to: VELGGGVAAAKPSRP*QRLDLVPLIIPVST Trigger: AGTGCTAACAGGAATGATGAGTGGGACCAAGTCCAGTCTCTGCAATGGCCTTGAGGGCTTTGCTGCAGCCACCCCTCCTCCCAGTTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS GCA 72 bp | ACTGGTGCCCGATCTACATTCTGGGGTGCCATCCCATaGCACACACCATCCTGGCTCATTTCCTCCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: TGARSTFWGAIP*HTPSWLISSWI Trigger: GATCCAGGAGGAAATGAGCCAGGATGGTGTGTGGCATGGGATGGCACCCCAGAATGTAGATCGGGCACCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS GCA 72 bp | CAGGCGTTCAACTGGTGCCCGATCTACATTCTGGGGTaGCATCCCATGCCACACACCATCCTGGCTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: QAFNWCPIYILG*HPMPHTILAHF Trigger: GAAATGAGCCAGGATGGTGTGTGGCATGGGATGGCACCCCAGAATGTAGATCGGGCACCAGTTGAACGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS GCA 72 bp | ACACAGGATCTCTGTGGACACCAGGCGTTCAACTGGTaGCCGATCTACATTCTGGGGTGCCATCCCATGCCA | + |
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Preference number: 6 (lower is better) Translates to: TQDLCGHQAFNW*PIYILGCHPMP Trigger: TGGCATGGGATGGCACCCCAGAATGTAGATCGGGCACCAGTTGAACGCCTGGTGTCCACAGAGATCCTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS CCA 72 bp | ACGACACAGGATCTCTGTGGACACCAGGCGTTCAACTaGTGCCCGATCTACATTCTGGGGTGCCATCCCATG | + |
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Preference number: 6 (lower is better) Translates to: TTQDLCGHQAFN*CPIYILGCHPM Trigger: CATGGGATGGCACCCCAGAATGTAGATCGGGCACCAGTTGAACGCCTGGTGTCCACAGAGATCCTGTGTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS CAA 72 bp | GCAGCAAAGCCCTCAAGGCCATTGCAGAGACTGGACTaGGTCCCACTCATCATTCCTGTTAGCACTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: AAKPSRPLQRLD*VPLIIPVSTVS Trigger: GGACACAGTGCTAACAGGAATGATGAGTGGGACCAAGTCCAGTCTCTGCAATGGCCTTGAGGGCTTTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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| CDS CCA 72 bp | CAGCAAAGCCCTCAAGGCCATTGCAGAGACTGGACTTaGTCCCACTCATCATTCCTGTTAGCACTGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: QQSPQGHCRDWT*SHSSFLLALCP Trigger: TGGACACAGTGCTAACAGGAATGATGAGTGGGACCAAGTCCAGTCTCTGCAATGGCCTTGAGGGCTTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062092.7 ENSMUST00000220899.2 |
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